Metagenome / Metatranscriptome Family F064073

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F064073
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	103 residues
Representative Sequence	MSQSGRRAILAAKDVPVIDTFQFANPFLVPSTVSFRVEWEATGPPEERGSGNAVPPTDRAAFLGTFAPARSTGQFSGAELGFSFASKPGASSDLGYAEIGTERNGVFLS
Number of Associated Samples	111
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	28.68 %
% of genes near scaffold ends (potentially truncated)	37.21 %
% of genes from short scaffolds (< 2000 bps)	90.70 %
Associated GOLD sequencing projects	106
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.899 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (18.605 % of family members)
Environment Ontology (ENVO)	Unclassified (22.481 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (33.333 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 2.19% β-sheet: 48.91% Coil/Unstructured: 48.91%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF08450	SGL	1.55
PF02410	RsfS	0.78
PF13614	AAA_31	0.78
PF16868	NMT1_3	0.78
PF07617	DUF1579	0.78
PF00196	GerE	0.78
PF01391	Collagen	0.78
PF04191	PEMT	0.78
PF03551	PadR	0.78
PF13474	SnoaL_3	0.78
PF02452	PemK_toxin	0.78
PF13185	GAF_2	0.78
PF01042	Ribonuc_L-PSP	0.78
PF01850	PIN	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	1.55
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	1.55
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.78
COG0799	Ribosomal silencing factor RsfS, regulates association of 30S and 50S subunits	Translation, ribosomal structure and biogenesis [J]	0.78
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.78
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.78
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.78
COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	Defense mechanisms [V]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.90 %
Unclassified	root	N/A	3.10 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.90 %
Unclassified	root	N/A	3.10 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.90 %
Unclassified	root	N/A	3.10 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3.88 %
Unclassified	root	N/A	3.10 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.33 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.55 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.78 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3.88 %
Unclassified	root	N/A	3.10 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	0.78 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.78 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.78 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.78 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	3.10 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	2.33 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	0.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.78 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.78 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.78 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.78 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	3.10 %
Rubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales	2.33 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.78 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	0.78 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.78 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.78 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	3.10 %
Rubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	2.33 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.78 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	0.78 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.78 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.78 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	3.10 %
unclassified Luteitalea	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea	0.78 %
unclassified Rubrobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae	0.78 %
Rubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter	0.78 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.78 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.78 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.78 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	3.10 %
Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	0.78 %
Luteitalea sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	0.78 %
Rubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter	0.78 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.78 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.78 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.78 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c1647897	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100371851	Not Available	504	Open in IMG/M
3300004153\|Ga0063455_101566477	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300005332\|Ga0066388_100838839	All Organisms → cellular organisms → Bacteria	1506	Open in IMG/M
3300005450\|Ga0066682_10383947	All Organisms → cellular organisms → Bacteria	902	Open in IMG/M
3300005553\|Ga0066695_10280060	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1053	Open in IMG/M
3300005598\|Ga0066706_11205324	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300005713\|Ga0066905_100419411	All Organisms → cellular organisms → Bacteria	1091	Open in IMG/M
3300005713\|Ga0066905_102293135	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300005937\|Ga0081455_10591066	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300005981\|Ga0081538_10072330	All Organisms → cellular organisms → Bacteria	1891	Open in IMG/M
3300006049\|Ga0075417_10299164	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300006169\|Ga0082029_1225707	All Organisms → cellular organisms → Bacteria → Proteobacteria	1134	Open in IMG/M
3300006580\|Ga0074049_12193222	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300006845\|Ga0075421_101855496	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300006852\|Ga0075433_10955979	Not Available	747	Open in IMG/M
3300006871\|Ga0075434_102089936	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300006876\|Ga0079217_10246340	All Organisms → cellular organisms → Bacteria	950	Open in IMG/M
3300006880\|Ga0075429_100201158	All Organisms → cellular organisms → Bacteria	1745	Open in IMG/M
3300007004\|Ga0079218_12079319	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300007004\|Ga0079218_12378046	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300007076\|Ga0075435_101192974	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300009089\|Ga0099828_10113043	All Organisms → cellular organisms → Bacteria	2363	Open in IMG/M
3300009100\|Ga0075418_11154686	All Organisms → cellular organisms → Bacteria	839	Open in IMG/M
3300009147\|Ga0114129_10032755	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7344	Open in IMG/M
3300009157\|Ga0105092_10024987	All Organisms → cellular organisms → Bacteria	3148	Open in IMG/M
3300009610\|Ga0105340_1289326	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300009792\|Ga0126374_10718688	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300009807\|Ga0105061_1056355	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	611	Open in IMG/M
3300009814\|Ga0105082_1020857	All Organisms → cellular organisms → Bacteria	993	Open in IMG/M
3300009820\|Ga0105085_1070851	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300009823\|Ga0105078_1032982	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300009840\|Ga0126313_10719975	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300010037\|Ga0126304_10131910	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1604	Open in IMG/M
3300010039\|Ga0126309_10129388	All Organisms → cellular organisms → Bacteria	1334	Open in IMG/M
3300010039\|Ga0126309_10209121	All Organisms → cellular organisms → Bacteria	1084	Open in IMG/M
3300010039\|Ga0126309_10296716	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	933	Open in IMG/M
3300010043\|Ga0126380_10892927	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300010045\|Ga0126311_10094040	All Organisms → cellular organisms → Bacteria	2043	Open in IMG/M
3300010045\|Ga0126311_11227862	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300010046\|Ga0126384_10045225	All Organisms → cellular organisms → Bacteria	3003	Open in IMG/M
3300010047\|Ga0126382_12344739	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300010336\|Ga0134071_10051426	All Organisms → cellular organisms → Bacteria	1870	Open in IMG/M
3300010359\|Ga0126376_10031103	All Organisms → cellular organisms → Bacteria	3609	Open in IMG/M
3300010360\|Ga0126372_11988852	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300010362\|Ga0126377_10033344	All Organisms → cellular organisms → Bacteria	4373	Open in IMG/M
3300010376\|Ga0126381_101907994	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	857	Open in IMG/M
3300010391\|Ga0136847_11510832	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300010391\|Ga0136847_13031702	All Organisms → cellular organisms → Bacteria	1819	Open in IMG/M
3300010395\|Ga0058701_10400732	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300010863\|Ga0124850_1058319	All Organisms → cellular organisms → Bacteria	1198	Open in IMG/M
3300011439\|Ga0137432_1206771	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300012187\|Ga0136622_10077818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1411	Open in IMG/M
3300012202\|Ga0137363_10975808	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300012205\|Ga0137362_10612267	All Organisms → cellular organisms → Bacteria	939	Open in IMG/M
3300012212\|Ga0150985_105722146	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300012212\|Ga0150985_110294065	All Organisms → cellular organisms → Bacteria	1208	Open in IMG/M
3300012361\|Ga0137360_10886431	Not Available	769	Open in IMG/M
3300012930\|Ga0137407_10448104	All Organisms → cellular organisms → Bacteria	1200	Open in IMG/M
3300012971\|Ga0126369_11556552	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300012976\|Ga0134076_10197526	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300014488\|Ga0182001_10143813	All Organisms → cellular organisms → Bacteria	805	Open in IMG/M
3300014879\|Ga0180062_1075288	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M
3300017654\|Ga0134069_1173129	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300017656\|Ga0134112_10350385	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300017965\|Ga0190266_10294970	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300018031\|Ga0184634_10394109	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300018063\|Ga0184637_10000040	All Organisms → cellular organisms → Bacteria	79013	Open in IMG/M
3300018063\|Ga0184637_10064721	All Organisms → cellular organisms → Bacteria	2237	Open in IMG/M
3300018075\|Ga0184632_10209795	All Organisms → cellular organisms → Bacteria	857	Open in IMG/M
3300018077\|Ga0184633_10195173	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1047	Open in IMG/M
3300018079\|Ga0184627_10297243	All Organisms → cellular organisms → Bacteria	847	Open in IMG/M
3300018079\|Ga0184627_10464411	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300018081\|Ga0184625_10057784	All Organisms → cellular organisms → Bacteria	1952	Open in IMG/M
3300018082\|Ga0184639_10063992	All Organisms → cellular organisms → Bacteria	1916	Open in IMG/M
3300018422\|Ga0190265_10462964	All Organisms → cellular organisms → Bacteria	1376	Open in IMG/M
3300018432\|Ga0190275_10641763	All Organisms → cellular organisms → Bacteria	1114	Open in IMG/M
3300018432\|Ga0190275_12289262	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300018432\|Ga0190275_13547076	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300018433\|Ga0066667_10667826	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300018465\|Ga0190269_11352500	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300018466\|Ga0190268_11114738	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	644	Open in IMG/M
3300018466\|Ga0190268_11659416	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300018469\|Ga0190270_10659722	All Organisms → cellular organisms → Bacteria	1030	Open in IMG/M
3300018469\|Ga0190270_11321247	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300018481\|Ga0190271_11717535	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300018481\|Ga0190271_13359478	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300018920\|Ga0190273_10961644	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300018920\|Ga0190273_11760144	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300018920\|Ga0190273_11900264	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300019259\|Ga0184646_1356007	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300019487\|Ga0187893_10827064	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300024430\|Ga0196962_10000755	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter	11820	Open in IMG/M
3300025325\|Ga0209341_10340621	All Organisms → cellular organisms → Bacteria	1227	Open in IMG/M
3300025910\|Ga0207684_10583840	All Organisms → cellular organisms → Bacteria	955	Open in IMG/M
3300026343\|Ga0209159_1204771	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300026548\|Ga0209161_10449524	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300027273\|Ga0209886_1027975	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300027384\|Ga0209854_1063804	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300027577\|Ga0209874_1036998	All Organisms → cellular organisms → Bacteria	1314	Open in IMG/M
3300027722\|Ga0209819_10003514	All Organisms → cellular organisms → Bacteria	4984	Open in IMG/M
3300027875\|Ga0209283_10593468	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300027909\|Ga0209382_11095606	All Organisms → cellular organisms → Bacteria	823	Open in IMG/M
3300027952\|Ga0209889_1112170	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300028705\|Ga0307276_10021353	All Organisms → cellular organisms → Bacteria	1273	Open in IMG/M
3300028744\|Ga0307318_10033873	All Organisms → cellular organisms → Bacteria	1671	Open in IMG/M
3300028754\|Ga0307297_10231919	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300030496\|Ga0268240_10130700	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300030902\|Ga0308202_1007407	All Organisms → cellular organisms → Bacteria	1435	Open in IMG/M
3300030903\|Ga0308206_1048897	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300031092\|Ga0308204_10233612	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300031421\|Ga0308194_10088084	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
3300031548\|Ga0307408_101747274	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300031740\|Ga0307468_100322398	All Organisms → cellular organisms → Bacteria	1136	Open in IMG/M
3300031824\|Ga0307413_10850915	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300031852\|Ga0307410_10245402	All Organisms → cellular organisms → Bacteria	1390	Open in IMG/M
3300031965\|Ga0326597_10197104	All Organisms → cellular organisms → Bacteria	2365	Open in IMG/M
3300031965\|Ga0326597_11612471	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300032004\|Ga0307414_10700717	All Organisms → cellular organisms → Bacteria	917	Open in IMG/M
3300032126\|Ga0307415_100469497	All Organisms → cellular organisms → Bacteria	1093	Open in IMG/M
3300032174\|Ga0307470_10512555	All Organisms → cellular organisms → Bacteria	878	Open in IMG/M
3300033407\|Ga0214472_10809056	All Organisms → cellular organisms → Bacteria	843	Open in IMG/M
3300033407\|Ga0214472_11200055	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300033812\|Ga0364926_146450	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300034115\|Ga0364945_0026898	All Organisms → cellular organisms → Bacteria	1533	Open in IMG/M
3300034147\|Ga0364925_0352483	Not Available	555	Open in IMG/M
3300034149\|Ga0364929_0098814	All Organisms → cellular organisms → Bacteria	919	Open in IMG/M
3300034150\|Ga0364933_136949	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300034151\|Ga0364935_0233164	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.27%
Host-Associated	Host-Associated	14.73%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	71.32%
Plants	Host-Associated → Plants	14.73%
Aquatic	Environmental → Aquatic	13.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	65.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.85%
Sediment	Environmental → Aquatic → Sediment	9.30%
Freshwater	Environmental → Aquatic → Freshwater	4.65%
Floodplain	Environmental → Terrestrial → Floodplain	4.65%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.33%
Cave	Environmental → Terrestrial → Cave	0.78%
Roots	Host-Associated → Plants → Roots	0.78%
Phylloplane	Host-Associated → Plants → Phylloplane	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	53.49%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	9.30%
Sand	Environmental → Terrestrial → Soil → Sand	6.98%
Loam	Environmental → Terrestrial → Soil → Loam	5.43%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	4.65%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.33%
Lake	Environmental → Aquatic → Freshwater → Lake	1.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.55%
Ice	Environmental → Aquatic → Freshwater → Ice	0.78%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.78%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.78%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.78%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	41.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	9.30%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.20%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	6.20%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	4.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.10%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.33%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.33%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.55%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.55%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	1.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.55%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.78%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.78%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.78%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.78%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	18.60%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	6.98%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.98%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.98%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	6.20%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	5.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.43%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.65%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	4.65%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.10%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.10%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	3.88%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.33%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.55%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	1.55%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	1.55%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.55%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.78%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.78%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.78%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.78%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.78%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.78%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.78%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	0.78%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006580	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009807	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_0_10	Environmental	Open in IMG/M
3300009814	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60	Environmental	Open in IMG/M
3300009820	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_50_60	Environmental	Open in IMG/M
3300009823	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_40_50	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300010395	Agave microbial communities from Guanajuato, Mexico - Or.Ma.e	Host-Associated	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300011439	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT820_2	Environmental	Open in IMG/M
3300012187	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ448 (21.06)	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300014879	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT45_16_10D	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019487	White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaG	Environmental	Open in IMG/M
3300024430	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_20	Environmental	Open in IMG/M
3300025325	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2 (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027273	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_40_50 (SPAdes)	Environmental	Open in IMG/M
3300027384	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027577	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027722	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027952	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10 (SPAdes)	Environmental	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300030496	Bulk soil microbial communities from Mexico - Penjamo (Pe) metaG (v2)	Environmental	Open in IMG/M
3300030902	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030903	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M
3300033812	Sediment microbial communities from East River floodplain, Colorado, United States - 65_j17	Environmental	Open in IMG/M
3300034115	Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17	Environmental	Open in IMG/M
3300034147	Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17	Environmental	Open in IMG/M
3300034149	Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17	Environmental	Open in IMG/M
3300034150	Sediment microbial communities from East River floodplain, Colorado, United States - 25_j17	Environmental	Open in IMG/M
3300034151	Sediment microbial communities from East River floodplain, Colorado, United States - 2_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_16478971	3300000033	Soil	PATVSFLVKWEATGPSHKRGSGKAVGPKNPAAFRGTFAPARSTGQFSGVELGFSFVSKPGVSSDRGYAEIGTERNGVFLS*
INPhiseqgaiiFebDRAFT_1003718511	3300000364	Soil	TVSFKIEWEATGAPVQLGSGNTVPATDPAAFLGTFAPARSTGQFSGAELGFSFVSKRGASTDLGYAQIGTERNGVFLS*
Ga0063455_1015664771	3300004153	Soil	VVAAKDVPVIDTFQFGGPFLVPATVSFEVKWEATGPQKKRGSGNAVGPKNPAAFRGTFARARSTGRFSGVELGFSFVSKPGASSERGGYAELGT
Ga0066388_1008388392	3300005332	Tropical Forest Soil	MSPSGRRAIFEAKDLPVIDTFQFANAFQVPAAVSFKIEWEATGPSMQLGSGKAVPATDPAAFLGIFGAARSTAHFSGAELGFSFVSKGRANTDPLGYAQIGTERNGVFLS*
Ga0066682_103839471	3300005450	Soil	FLVPSTVSFRVEWDATGPLKQLGSGNAVPATDPASFLGTFAPARSTGQFSGAELGFSFSSKRGASSDRGYAEIGTERNGIFLS*
Ga0066695_102800603	3300005553	Soil	MSHDRRRAILEAKDVPVIDTFQFAHPFLAPSTVSFRVEWDATGPPEQLGSGNAVPATDPASFLGTFAPARSTGQFSGAELGFSFSSKRGASSDRGYAEIGTERNGIFLS*
Ga0066706_112053242	3300005598	Soil	MSHDRRRAILEAKDVPVIDTFQFAHPFLAPSTVSFRVEWDATGPPEQLGSGNAVPATDPASFLGTFAPARSTGQFSGAELGFSFSSKRGASSDRGYAEIGTERNGIF
Ga0066905_1004194112	3300005713	Tropical Forest Soil	LPVIDTFQFANAFQVPATVSFKIEWEATGPSMQLGLGNTVPPTDPAAFLGMVARARSTGHFSGAELGFSFVSKGRATTDLGYAQIGTERNGVFLS*
Ga0066905_1022931351	3300005713	Tropical Forest Soil	AIFEVRDLPVIDTFQFANAFQVPASVSFKIEWEATGQPEQLGSGNMVPTTDPAAFLGMFARARSSGQFSGAELGFSFVSKGRANTDPLGYAQIGTERNGVFLS*
Ga0081455_105910662	3300005937	Tabebuia Heterophylla Rhizosphere	LAAKDVPVIDTFRFANAFLVPSTVSFRVEWEATGPPEQLGSGNAVPATHPAAFLGTFAPARSTGQFSGAELGFSFASKRGASSDLGYAEIGTERNGVFLS*
Ga0081538_100723302	3300005981	Tabebuia Heterophylla Rhizosphere	MSRDGRRALLAAKDVPVIDTFQFGGTFLVPATVSFVVKWEATGPSRKLGSGKAVGPKNPAAFRGTFAPARSTGRFSGAGLGFSFESKPGASSEERGYAEIGTERNGVFLSKSKRSGGARVKGHSPH*
Ga0075417_102991641	3300006049	Populus Rhizosphere	MSRSGRRAIVEARDVPLIDTFQFANAFLVPSTVSFRVEWEATGQPMEHGSGNAVPATDPAAFLGTFAAARSTGQFSGAELGFSFVSKRGASTDLGYAQIGTER
Ga0082029_12257071	3300006169	Termite Nest	VVAAKDVPVIDTFQFAGTFLVPATVSFLMKWEATGPPKKLGSGKAVGPKNPAAFRGTFAPARSTGRFSGAELGFSFVSKPGASSEQRGYAEIGTERNGVFLS*
Ga0074049_121932222	3300006580	Soil	MSPSGRRAILEARELPVIDTFQFANAFFVPSTVSFKIEWEATGPPEQLGSGNSVPATDPAAFLGTFAPARSTGQFSGAELGFSFASKRGASTDLGYAQIGTERNGVFLS*
Ga0075421_1018554962	3300006845	Populus Rhizosphere	MSRSGRRAIVEARDVPLIDTFQFANAFLVPSTVSFRVEWEATGQPMEHGSGNAVPATDPAAFLGTFAPARSTGQFSGAELGFSFASKRGASTDPLGYAQIGTERNGVFLS*
Ga0075433_109559792	3300006852	Populus Rhizosphere	VELPHGAFRMSPSGRRAILEARELPVIDTFQFANAFFVPSTVSFKIEWEATGAPVQLGLGNTVPATDPAAFLGTFAPARSTGQFSGAELGFSFASKRGASTDPLGYAQIGTERNGVFLS*
Ga0075434_1020899361	3300006871	Populus Rhizosphere	VSKHGERATLRVKDVPVLDTFQFANPFLLPSTVSFNLEWEATGPPQALGSGNAVPPADPAAFLGTFAPSRCTGSLSGNELGFSFESAPGASSDRGYAELGTERNGAFL*
Ga0079217_102463402	3300006876	Agricultural Soil	MSRDGRRARLAAKDVPVIDTFQFAGTFLVPATVSFKVEWEATGPREQLGSGDAVPPTDPAAFLGKFAPARSTGWFSGAELGFSFESKPGASSDRGGYAEIGK
Ga0075429_1002011582	3300006880	Populus Rhizosphere	VPLIDTFQFANAFLVPSTVSFRVEWEATGQPMEHGSGNAVPATDPAAFLGTFAPARSTGQFSGAELGFSFASKRGASTDPLGYAQIGTERNGVFLS*
Ga0079218_120793192	3300007004	Agricultural Soil	STVSFNVKWEATGPPEELGSGNAVPPTDPAAFLGTFAPARSTGRFSGAELGFSFVSKPGANTERGYAEIGKERNGVFLS*
Ga0079218_123780462	3300007004	Agricultural Soil	SRDGRRALLAAKDVAVIDTFQFAGPFLVPATVSFEVKWEAIGPPKKLGSGKAVRPKDPAAFRGTFAPARSTGRFSGAELGFSFVSKPGASSERGYAEIGTERNGDFLSTSKRSGEGA*
Ga0075435_1011929742	3300007076	Populus Rhizosphere	MSRSGRRAIVEARDVPLIDTFQFANAFLVPSTVSFRVEWEATGQPMEHGSGNAVPATDPAAFLGTFAPARSTGQFSGAELGFSFVSKRGASTDLGYAQIGTERNGVFLS*
Ga0099828_101130431	3300009089	Vadose Zone Soil	MSQSGRRAILAAKDVPVIDTFQFANPFLVPSTVSFRVEWEATGPPEERGSGNAVPPTDRAAFLGTFAPARSTGQFSGAELGFSFASKPGASSDLGYAEIGTERNGVFLS*
Ga0075418_111546861	3300009100	Populus Rhizosphere	MSQSGRRAIVEARDVPVIDTFQFANAFFVPSTVSFKIEWEATGAPVQLGSGNTVPATDPAAFLGTFAPARSTGQFSGAELGFSFVSKRGASTDLGYAQIGTERNGVFLS*
Ga0114129_100327552	3300009147	Populus Rhizosphere	MSKDGRRAVVEAEDVHLIDTFQFASPFLTPSTVSFRVEWDATGPPQPLGSGIAVPPTDPAAFLGMIARARSTGEFAGAELGFSFASKQGVSTDLGYAQIGTERNGVFLS*
Ga0105092_100249873	3300009157	Freshwater Sediment	MSRSGRRAIVEARDVAVIDTFQFANAVSVPATVSFKIEWEATGPPEELGSGNMVPATDPAAFLGTFAPARSTGQFSGVELGFSFESKRGVSTDRGYAQIGTERNGVFLS*
Ga0105340_12893262	3300009610	Soil	LPVIDTFQFANAVSVPATVSFRIEWDATGPPEQLGSGNAVPPTDPAAFLGTFAPARSTGYFSGAELGFSFASKRGASTDLGYAEIGTERNGVFLP*
Ga0126374_107186882	3300009792	Tropical Forest Soil	LPVIDTFQFANAFQVPASVSFKIEWEATAQPEQRGSGNMVPATDPAAFLGMIARARSTGQFSGAEVGFSFVSKGRANTDPLGYAQIGTERNG
Ga0105061_10563551	3300009807	Groundwater Sand	VPVIDTFQFSSPFLVPSTVSFDVEWEAIGPPEEHGLGDTVDPTDKAAFLGRFAPARSTGSFSGAELGFSFESKPGASTDLGYAE
Ga0105082_10208572	3300009814	Groundwater Sand	LFWTAELPRDSFRISRSGRRARVTANDLPVIDTFSFANPFLVPSTVSFEVDWEATGPPEELGSGKGVPPTDKAAFLGTFAPARATGRFSGSELGFSFRSTPGASTDPLGYAELGTERNGVFLP*
Ga0105085_10708511	3300009820	Groundwater Sand	LFWTAELPRDSFRISRSGRRARVTANDLPVIDTFSFANPFLVPSTVSFEVDWEATGPPEELGSGKGVPPTDKAAFEGTFAPARATGRFSGAELGFSFRSRPGASTDPLGYAELGTERNGVFLP
Ga0105078_10329821	3300009823	Groundwater Sand	MSRNGRRAIVEVKDVPVIDTFQFANPFLVPSTVSFKIEWEAIGPPEQLGSGNGVPATDPAAFLGTFAPARSTGQFWGAELGFSFASKRGASTDLGYAEIGTERNGV
Ga0126313_107199752	3300009840	Serpentine Soil	VAKDVPVIDTFQFAGPFLVPATVSFLVKWEATGPSHKRGSGKAVRPKNPAAFRGTFAPARSTGRFSGAELGFSFVSKPGANSERGYAE
Ga0126304_101319101	3300010037	Serpentine Soil	VPATVSFEVKWEATGPQKKLGSGKAVRPKNPAAFRGTFAPARSTGRFSGAELGFSFVSKPGASSERGGYAEIGTERNGVFLS*
Ga0126309_101293882	3300010039	Serpentine Soil	MSRDGRRAVVAAKDVPVIDTFQFGGSFLVPATVSFLVNWEATGPSHKRGSGKAVGPKNRAAFRGTFAPARSTGRFSGSELGFSFVSKPGANTERGYAEIGTERNGVFLS*
Ga0126309_102091211	3300010039	Serpentine Soil	MSRDGRRAVVAAKDVPVIDTFQYGGPFLVPATVSFLVKWEATGPSHKRGSGKAVGPKNPAAFRGTFAPARSTGRFSGAELGFSFVSKPGASSERGGYAEIGKERNGDFLS*
Ga0126309_102967161	3300010039	Serpentine Soil	GAFHMSRDGRRAVVAAKDVPVIDTFQFGGPFLVPATVSFEVKWEATGRSHKRGLGKAVGPKNPAAFRGTFARARSTGRFSGSELGFSFVSKPGASSERDGYAEIGTERNGVFLS*
Ga0126380_108929272	3300010043	Tropical Forest Soil	MSPSGRRAIFEVRDLPVIDTFQFANAFQVPATVSFKIEWEATGPSMQLGLGNTVPPTDPAAFLGMVARARSTGHFSGAELGFSFVSKGRASTDRGYAQIGIERNGVFLS*
Ga0126311_100940404	3300010045	Serpentine Soil	VELPDGAFHMSRDGRRAVVAAKDVPVIDTFQFGGPFLVPATVSFEVRWETTGPSHKRGSGKAVGPKNPAAFRGTFARARSTGRFSGVELGFSFESKPGASSERGGYAEIGKERNGVFLS*
Ga0126311_112278621	3300010045	Serpentine Soil	AVVVAKDVPVIDTFQFAGPFLVPATVSFLVKWEATGPSHKRGSGKAVRPKNPAAFRGTFAPARSTGRFSGAELGFSFVSKPGANSERGYAEIGTERNGVFLS*
Ga0126384_100452253	3300010046	Tropical Forest Soil	MSPSGRRAIFEVRDLPVIDTFQFANAFQVPATVSFKIEWEATGPSMQLGLGNTVPPTDPAAFLGMVARARSTGHFSGAELGFSFVSKERATTDLGYAQIGTERNGVFLS*
Ga0126382_123447391	3300010047	Tropical Forest Soil	MSPSGRRAIFEVRDLPVIDTFQFANAFQVPASVSFKIEWEATGQPEQLGSGNMVPTTDPAAFLGMFARARSSGQFSGAELGFSFVSKGRANTDPLGYAQIGTERNGVFLS*
Ga0134071_100514262	3300010336	Grasslands Soil	MSHDRRRAILEAKDVPVIDTFQFAHPFLAPSTVSFRVEWDATGPPEQLGSGNAVPATDPASFLGTFAPARSTGQFSGAELGFSFVSKRGASTDLGYAQIGTERNGIFLS*
Ga0126376_100311034	3300010359	Tropical Forest Soil	MSPSGRRAIFEVRDLPVIDTFQFANAFQVPATVSFKIEWEATGPSMQLGLGNTVPPTDPAAFLGMVARARSTGHFSGAELGFSFVSKGRATTDLGYAQIGTERNGVFLS*
Ga0126372_119888522	3300010360	Tropical Forest Soil	MSPSGRRAIFEVRDLPVIDTFQFANAFQVPATVSFKIEWEATGPSMQLGLGNTVPPTDPAAFLAIVARARSTGHFSGAELGFSFVSKGRATTDLGYAQIGTERNGMFLS*
Ga0126377_100333443	3300010362	Tropical Forest Soil	MSASGRRAILEARDLPVIDTFQFANPFLVPSTVSFKIEWEATGQPEQHGSGNMVPATDPAAFLGMFAPARSTGHFSGAELGFSFVSKGRASTDRGYAQIGIERNGVFLS*
Ga0126381_1019079942	3300010376	Tropical Forest Soil	VPATVSFKIEWEATGPSMQLGLGNTVPPTDPAAFLAIVARARSTGHFSGAELGFSFVSKGRATTYLGYAQIGTERNGMFLS*
Ga0136847_115108322	3300010391	Freshwater Sediment	MSKNKMRAVVEARNLPLIDTFQFGSPFLVPSTASFRVEWDATGPPAQLGSGNAVPPTDPAAFLGMIAPARSTGQFWGAELGFSFASKPGVSTDLGYAELGTERNGVFLV*
Ga0136847_130317022	3300010391	Freshwater Sediment	MSNNGRRAVVEARNVSLIDTFQFASPFLVPSTVSFRVEWDATGAPQPLGSGKAVPATDPAAFLGMFAPARSTGEFSGAELGFSFATKQGASTDRGYAEFGTERNGVFLS*
Ga0058701_104007322	3300010395	Agave	VVAAKDVPVIDTFQFAGTFLVPATVSFLMKWEATGPQKKLGSGKGVGPKNPAAFRGTFARARSTGRFSGSELGFSFVSKPGASSERGGYAEIGTERNG
Ga0124850_10583191	3300010863	Tropical Forest Soil	VPATVSFKIEWEATGPSMQLGLGNTVPPTDPAAFLGMVARARSTGHFSGAELGFSFVSKERATTDLGYAQIGTERNGVFLS*
Ga0137432_12067711	3300011439	Soil	VPATVSFKIEWEATGPPVELGSGNTVPATDPAAFLGTFAPARSTGQFSGAELGFSFASKRGASTDPLGYAQIGTERNGVFL*
Ga0136622_100778181	3300012187	Polar Desert Sand	PFLVPATVSFEVKWEATGPQKELGSGKAVRPKNPAAFRGTFAPARSTGQFSGSELGFSFVSKPGASSERGYAEIGTERNGDFLSRAKRSGGGA*
Ga0137363_109758081	3300012202	Vadose Zone Soil	DTFQFANAFLVPLTVSFRIEWEATGQPEEHGSGNAVPATDPAAFLGMFAPARSTGQFSGTELGFSFVSKRGASTDLGGYAQIGTERNGVFLS*
Ga0137362_106122672	3300012205	Vadose Zone Soil	MSPSGRRAIFEARDLPVIDTFQFANAFLVPSTVSFKIEWEATGQPEEHGSGNAVPATDPAAFLGMFAPARSTGQFSGTELGFSFVSKRGASTDLGGYAQIGTERNGVFLS*
Ga0150985_1057221461	3300012212	Avena Fatua Rhizosphere	VVAAKDVPVIDTFQFGGPFLVPATVSFEVKWEATGPQKKRGSGNAVGPKNPAAFRGTFARARSTGRFSGVELGFSFVSKPGASSERGGYAELGTERNGVFLS*
Ga0150985_1102940651	3300012212	Avena Fatua Rhizosphere	MSRDGRRAVVVAKDVPVIDTFQFGGSFLVPATVSFLVEWEATGPSRKLGSGKAVGPKNPAAYRGTFAPARSTGRFSGAELGFSFASKPGASSERGYAAIGTE
Ga0137360_108864311	3300012361	Vadose Zone Soil	MSPSGRRAIFEARDLPVIDTFQFANAFLVPSTVSFRIEWEATGQPEEHGSGNAVPATDPAAFLGMFARARSTGQFSGAELGFSFVSKRGASSDLGGYAQIGTERNGVFLS*
Ga0137407_104481041	3300012930	Vadose Zone Soil	MSPSGRRAILEARELPVIDTFQFANAFVVPATVSFKIEWVATGPPVPLGSGNTVPATDPAAFLGTFAPARSTGQFSGAELGFSFVSKRGASSDLGYAQIGTERNGVFLS*
Ga0126369_115565521	3300012971	Tropical Forest Soil	FRMSPSGRRAIFEVRDLPVIDTFQFANAFQVPATVSFKIEWEATGPSMQLGLGNTVPPTDPAAFLGMVARARSTGHFSGAELGFSFVSKGRATTDLGYAQIGTERNGVFLS*
Ga0134076_101975261	3300012976	Grasslands Soil	MSHDRRRAILEAKDVPVIETFQFAHPFLAPSTVSFRVEWDATGPPEQLGSGNAVPATDPASFLGTFAPARSTGQFSGAELGFSFSSKRGASSDRGYAEIGTERNGIFLS*
Ga0182001_101438132	3300014488	Soil	MSRDGRHALLAAKDVPLIDTFEFAGPFLVPATVSFEVKWEATGPPKELGSGKAVRPKNPAAFRGTFAPARSTGRFSGSELGFSFVSKPGANTERTYAEIG
Ga0180062_10752882	3300014879	Soil	MSRSGRRAIVEARAVPVIDTFQFANAVSVPATVSFKIEWEATGPPVELGSGNTVPATDPAAFLGTFAPARSTGQFSGAELGFSFASKRGASTDPLGYAQIGTERSVPFIVHGGSHGPCL
Ga0134069_11731292	3300017654	Grasslands Soil	LEAKDVPVIDTFRFANPFLVPSTVSFRVEWDATGPLKQLGSGNAVPATDPASFLGTFAPARSTGQFSGAELGFSFSSKRGASSDRGYAEIGTERNGIFLS
Ga0134112_103503851	3300017656	Grasslands Soil	MSHDRRRAILEAKDVPVIDTFQFAHPFLAPSTVSFRVEWDATGPPEQLGSGNAVPATDPASFLGTFAPARSTGQFSGAELGFSFSSKRGASS
Ga0190266_102949701	3300017965	Soil	VVAAKDVPVIDTFQYAGRFLVPATVSFEVKWEATGPQKKLGSGKAVRPKNPAAFRGTFAPARSTGRFSGSELGFSFESKPGASSERGGYAEIGTERNGVFLS
Ga0184634_103941091	3300018031	Groundwater Sediment	MSPSGRRAILEARELPVIDTFQFANTFFVPSTVSFKIEWEATGPPEHLGSGNAVPATDPAAFLGTFAPARSTGKFSGAELGFSFASKPGASSDLGYAEIGTERNGVFLS
Ga0184637_1000004028	3300018063	Groundwater Sediment	MSRNGKRAWLRAHDVPVIDTFRFSNPFLVPSTVSFDVEWEAIGPPDEFGSGDKVPPTDRAAFLGTFAEARSTGWFSGSELGFSFESKSGASTDLGYAQFGTERNGVFL
Ga0184637_100647213	3300018063	Groundwater Sediment	MSRNGRRASVEVKDVPVIDTFQFANAFLVPSTVSFKIEWEATGPPEQLGSGHAVPPTDPAAFLGTFAPARSTGQFSGAELGFSFASKGGASTDFGYAEIGTERNGVFLL
Ga0184632_102097952	3300018075	Groundwater Sediment	MSASGRRAILEARELPVIDTFQFANTFFVPSTVSFKIEWEATGPPEQLGSGNTVPATDPAAFLGTFAPARSTGQFSGGELGFSFASKRGASTDLGYAQIGTERNGVFLS
Ga0184633_101951731	3300018077	Groundwater Sediment	MSRNGKRAWLRAHDVPVIDTFRFSNPFLVPSTVSFDVGWEAIGPPDEFGSGDKLPPTDRAAFLGTFAEARSTGWFSGSELGFSFESKSGASTDLGYAQFGTERNGVFL
Ga0184627_102972432	3300018079	Groundwater Sediment	MSKNGMRAIVEARDVPVIDTFQFASPFLVPSTVSFRIEWDATGPPEQLGSGNAVQATDPAAFLGMFAPARSTGQFLGAELGFSFASKRGASTDLGYAEIGTERNGVFLS
Ga0184627_104644111	3300018079	Groundwater Sediment	RFANAFLVPSTVSFTIEWEAIGPSERLGSGNSVPPTDPAAFLGTFAPARSSGQFSGAELGFSFASKRGASTDFGYAQIGTERNGVFLS
Ga0184625_100577842	3300018081	Groundwater Sediment	VPVIDTFQFANAVSVPATVSFKIEWEATGPPEQLGSGNTVPATDPAAFLGTFAPARSTGQFSGAELGFSFASKRGASTDLGYAQIGTERNGVFLS
Ga0184639_100639924	3300018082	Groundwater Sediment	MSENGRRAILDARDVPVIDTFQFASPFLVPSTVSFRIEWDATGPPEQLGSGNAVQATDPAAFLGMFAPARSTGQFLGAEVGFSFASKRGASTELRYAEIGTERNGVFLL
Ga0190265_104629641	3300018422	Soil	VVVAKDVPVIDTFQYAGPFLVPATVSFEVKWEATGPPKKLGSGKAVRPKNPAAFRGTFAPARSTGRFSGAELGFSFVSKPGASSERGYAEIGTERNGVFLS
Ga0190275_106417632	3300018432	Soil	VVAAKDVPIIDTFQFAGTFLVPATVSFLIKWEATGPPKKLGSGKAVGPKNPAAFRGTFAPARSTGRFSGSELGFSFVSKPGASSEQRGYAEIGTERNGDFLSKSKRSGGGA
Ga0190275_122892621	3300018432	Soil	VVAAKDVPVIDTFQFGGSFLVPATVSFEVKWEATGPSHKRGSGKAVRPKNPAAFRGTFARARSTGRFSGSELGFSFVSKPGASSERGYAEIGTERNGVFLS
Ga0190275_135470761	3300018432	Soil	RDGRRAVVVAKDVPVIDTFQYAGSFLVPATVSFLVKWEATGPSHKRGSGKAVGPKNPAAFRGTFARARSTGRFSGSELGFSFVSKPGASSERGGYAEIGTERNGVFLS
Ga0066667_106678262	3300018433	Grasslands Soil	MSHDRRRAILEAKDVPVIDTFQFAHPFLAPSTVSFRVEWDATGPPEQLGSGNAVPATDPASFLGTFAPARSTGQFSGAELGFSFSSKRGASSDRGYAEIGTERNGIFLS
Ga0190269_113525001	3300018465	Soil	VELPDGAFHMSRDGRRAVVAAKDVPVIDTFQFGGSFLVPATVSFEVRWETTGPSHKRGSGKAVRPKTPAAFRGTFARARSTGRFSGAELGFSFVSKPGASSERGGYAEIGTERNGVFLS
Ga0190268_111147381	3300018466	Soil	TVSFLVKWEATGPSRKLGSGRAMRPKNPAAFRGTFAPARSTGRFSGAELGFSFVSKPGASSERGYAEIGTERNGVFLS
Ga0190268_116594161	3300018466	Soil	PFLVPATVSFLVEWEATSPPKELGLGKAVRPKDPAAFRGTFAPARSTGRFSGSELGFSFESKPGANSERGYAEIGTERNGDFLSKRSGGGA
Ga0190270_106597222	3300018469	Soil	MSRDRRRAVVAAKDVPVIDTFQFAGTFLVPATVSFLIKWEAAGPPKKLGSGKAVGPKNPAAFRGTFAPARSTGRFSGSELGFSFVSKPGASSEQRGYAEIGTERNGDFLSKSKRSGGGA
Ga0190270_113212472	3300018469	Soil	MSRDGRRAVVVAKDVPVIDTFQFGGSFLVPATVSFEVKWEATGPSHKRGSGKAVRPKNPAAFRGTFARARSTGRFSGSELGFSFVSKPGASSERGGYAEIGTERNGVFLS
Ga0190271_117175352	3300018481	Soil	MSPDGKRAVVAAKDVPVIDTFEFAGTFLVPSTVSFVVEWEATGPQKKLGSGKAVGPKNPAAFRGTFAPARSTGRFSGFELGFSFVSKPGASSERGYAQIGTERNGVFLSKSERSGGGT
Ga0190271_133594782	3300018481	Soil	VVAAKDVPVIDTFQFGGSFLVPATVSFEVKWEATGPSHKRGSGKAVRPKNPAAFRGTFARARSTGRFSGSELGFSFVSKPGASSERGGYAEIGTERNGVFLS
Ga0190273_109616441	3300018920	Soil	MSRDGRRALLAAKDVPVIDTFQYAGPFLVPATVSFEVKWEATGPSHKRGSGKAVRPKNPAAFRGTFARARSTGRFSGSELGFSFVSKPGASSERGGYAEIGKERNGVFLS
Ga0190273_117601441	3300018920	Soil	MSRDGRRAVVAAKDVPVIDTFQYGGPFLVPATVSFLVKWEATGPSHKRGSGKAVGPKNPAAFRGTFAPARSTGRFSGSELGFSFVSKPGASSERGGYAEIGKERNGVFLS
Ga0190273_119002641	3300018920	Soil	DVPVIDTFQYAGPFLVPATVSFEVKWEATGPPKKLGSGNAVRPKDTAAFRGTFAPAHSTGRFSGSELGFSFVSKPGANSDRGYAEIGTERNGDFLSKSKRSGGGA
Ga0184646_13560071	3300019259	Groundwater Sediment	MSHDRSRAILEAKDVPVIDTFQFANAFLVPSTVSFKIEWEATGPQEQLGSGRAVPETDPAAFLGSIAPARSTGHFSGAELGFTFASKRGASSDRGYAEIGTERNGAE
Ga0187893_108270641	3300019487	Microbial Mat On Rocks	KDVPVIDTFQFANPFLVPSTVSFRIEWDATGPPQQLGSGNAVPATDPAAFLGTFAPARSTGRFAGTELGFSFVSKPGASSDRGYAEIGTERNGIFLS
Ga0196962_100007552	3300024430	Soil	MSRDGRRAVVVAKDVPVIDTFQFAGTFLVPATVSFLIKWEATGPSRKLGSGKAVGPKNPAAFRGTFAPARSTGRFSGSGLGFSFESKPGASSEERGYAEIGTERNGVFLS
Ga0209341_103406211	3300025325	Soil	LSGLFWTVEFPEGAFRISRNRRRAILEAKDVPVIDTFQFANPFLVPSTVSFKVEWEATGPPEQHGSGNAVPTTDPAAFLGTFAPARSTGRFSGAELGFSFESKRGVSSDLGYAELGTERNGVFLS
Ga0207684_105838402	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MSRNGRRAIVAAKDVPVIDTFHFANPFLVPSTVSFRVEWEATGPPEERGSGNAVPPTDRAAFLGTFAPARSTGQFSCAELGFSFASKQGASSDLGYAEIGTERNGVFLS
Ga0209159_12047711	3300026343	Soil	DVPVIDTFQFAHPFLAPSTVSFRVEWDATGPPEQLGSGNAVPATDPASFLGTFAPARSTGQFSGAELGFSFSSKRGASSDRGYAEIGTERNGIFLS
Ga0209161_104495242	3300026548	Soil	MSHDRRRAILEAKDVPVIDTFQFAHPFLAPSTVSFRVEWDATGPPEQLGSGNAVPATDPASFLGTFAPARSTGQFSGAELGFSFSSKRGASSDRGYAEIGTER
Ga0209886_10279751	3300027273	Groundwater Sand	MSRNGRRAIAAARDVPVIDTFQFASPFLVPSTVSFEIEWEATGPPEQLGSGNAVPATDPAAFLGTIAPARSTGRFSGVELGFSFASKRGASTDLGYAEFGTERNGVFLS
Ga0209854_10638042	3300027384	Groundwater Sand	LMSGLFWTVELPRGAFHVSGNGRRAMVEVRDVPVIDTFQFASPFLVPSTVSFKIEWQATGPLEELGSGNSVPPTDPAAFLGRFARARSRGQFSGSELGFSFATEESADTELGYAELGTERNGVFLG
Ga0209874_10369981	3300027577	Groundwater Sand	GRRARLRAEDVPVIDTFQFSNPFLVPSTVSFSVQWEATGPPEDLGSGDTVPPTDSAAFLGTFAPARSTGWFSGAELGFSFESKAGASTDLGYAELGTERNGVFL
Ga0209819_100035146	3300027722	Freshwater Sediment	MSRSGRRAIVEARDVAVIDTFQFANAVSVPATVSFKIEWEATGPPEELGSGNMVPATDPAAFLGTFAPARSTGQFSGVELGFSFESKRGVSTDRGYAQIGTERNGVFLS
Ga0209283_105934682	3300027875	Vadose Zone Soil	MSQSGRRAILAAKDVPVIDTFQFANPFLVPSTVSFRVEWEATGPPEERGSGNAVPPTDRAAFLGTFAPARSTGQFSGAELGFSFASKPGASSDLGYAEIGTERNGVFLS
Ga0209382_110956062	3300027909	Populus Rhizosphere	MSRSGRRAIVEARDVPLIDTFQFANAFLVPSTVSFRVEWEATGQPMEHGSGNAVPATDPAAFLGTFAPARSTGQFSGAELGFSFASKRGASTDPLGYAQIGTERNGVFLS
Ga0209889_11121701	3300027952	Groundwater Sand	MSRSRRRARLRAEDVPVIDTFQFSNPFLVPSTVSFNVEWEATGEPEEVGSGDTVPATDKAAFLGRFAPARSTGWFSGAELGFSFESKPEASTDR
Ga0307276_100213532	3300028705	Soil	VVAAKDVPVIDTFQFGGSFLVPATVSFLVKWEATGRSHKRGSGKAVGPKNPAAFRGTFAPARSTGRFSGAELGFSFESKPGASSERGGYAEI
Ga0307318_100338732	3300028744	Soil	VVAAKDVPVIDTFQFAGSFLVPATVSFLVEWEATGPSHKRGSGKAVGPKNPAAFRGTFAPARSTGRFSGAELGFSFVSKPGANTERGYAEIGTERNGVFLS
Ga0307297_102319191	3300028754	Soil	FLVPATVSFLVKWEATGRSHKRGSGKAVGPKNPAAFRGTFAPARSTGRFSGAELGFSFETKPGASSERGGYAEIGKERNGVFLS
Ga0268240_101307001	3300030496	Soil	VSFEVKWEATGPPEELGSGNAVRPKNPAAFRGTFAPARSTGRFSGAELGFSFVSKPGASSERGGYAEIGTERNGVFLS
Ga0308202_10074073	3300030902	Soil	VPATVSFLVKWEATGPQKKRGSGKAVGPKNPAAFRGTFAPARSTGRFSGAELGFSFETKPGASSERGGYAEIGKERNGVFLS
Ga0308206_10488971	3300030903	Soil	MSRDGRRAVVAAKDVPVIDTFQFAGSFLVPATVSFEVKWEATGPSHKRGSGKAVGPKNPAAFRGTFAPARSTGRFSGSELGFSFVSRPGASSERGGYAEIGKERNGVFLS
Ga0308204_102336122	3300031092	Soil	VVAAKDVPVIDTFQFGGPFLVPATVSFEVKWEATGPSHKRGSGKAVGPKNPAAFRGTFARARSTGRFSGSELGFSFVSKPGASSERGGYAEIGTERNGVFLS
Ga0308194_100880841	3300031421	Soil	MDEKKGRATLEATDVPVIDTFQFASPFLVPSTVSFKIDWDATGPPVQLGSGKAVPPTNPAAFLGTFAPAHSTGEFSGAELGFSFESKSGASTTLGYAEIGTERNGVFLS
Ga0307408_1017472741	3300031548	Rhizosphere	MSRDGRRALLAAKDVPVIDTFQFAGPFLVPATVSFLVKWEATGPSRKLGSGKAVRPKNPAAFRGTFAPARSTGRFSGAELGFSFVSKPGASSERGYAEIG
Ga0307468_1003223982	3300031740	Hardwood Forest Soil	MSQSGRRAIVEARDVPVIDTFQCANAFFVPATVSFKIEWEATGAPVQLGSGNTVPATDPAAFLGTFAPARSTGQFSGAELGFSFVSKRGASTDPLGYAQIGTERNGVFLS
Ga0307413_108509151	3300031824	Rhizosphere	TVSFKVKWEATGPSRKLGSGKAVPPTDLAAFLGTFAPARSTGQFSGTELGFSFVSKPGASSEERGYAEIGTERNGVFLS
Ga0307410_102454022	3300031852	Rhizosphere	VPVIDTFRFANAFNVPSTVSFKTEWEATGPAVQLGSGNAVPATDPAAFLGMFAPARSTGVFSGAELGFSFVTKRGASSDLGYAQIGTERNGVFLS
Ga0326597_101971042	3300031965	Soil	MSGNGRRAIVEAKDVPVIDTFQFGNAFLVPSTVSFKVEWEAIGPPAQLGSGNSVPATDPAAFLGQIAPARSTGQFSGAELGFSFASKRRASTDFGYAQLGTERNGVFLS
Ga0326597_116124712	3300031965	Soil	MSRNGRRAIVDARDVPVIDTFQFGNAFLVPSTVSFKIEWEATGPPQPLGSGNTVPATDPAAFLGEFAPARSTGRFSGAELGFGFVSNSGVSTDLGYAQLGTERNGVFLS
Ga0307414_107007171	3300032004	Rhizosphere	MSQSGRRALVEARDVPVIDTFRFANAFNVPSTVSFKTEWEATGPAVQLGSGNAVPATDPAAFLGMFAPARSTGQFSGAELGFSFVSKRGASSDLGY
Ga0307415_1004694971	3300032126	Rhizosphere	VVAAKDVPVIDTFQFANPFLVPSTVSFKVKWEATGPPEELGSGNAVPPTDPAAFLGTFAPARSTGRFSGAELGFSFVSKPGANSERGYAEIGTERNGDFLSKAKRSGGGA
Ga0307470_105125552	3300032174	Hardwood Forest Soil	MSPSGRRAILEARELPVIDTFQFANAFFVPSTVSFKIEWEATGAPVQLGSGNTVPATDPAAFLGTFAPARSTGQFSGAELGFSFVSKRGASSDRGYAQIGTERNGVFLS
Ga0214472_108090562	3300033407	Soil	LPRGAFRMSGNGRRAIVEAKDVPVIDTFQFGNAFLVPSTVSFKVEWEAIGPPAQLGSGNSVPATDPAAFLGQIAPARSTGQFSGAELGFSFASKRRASTDFGYAQLGTERNGVFLS
Ga0214472_112000551	3300033407	Soil	MSRNGKRARLRAHDVPVIDTFQFASPFLVPSTVSFNVEWEAIGPPEEFGSGDTVPPTDRAAFLGTFAEARSTGWFSGAELGFSFESKPGASTDLGYAEFGTERNGVFL
Ga0364926_146450_157_486	3300033812	Sediment	MSRNGRRAIAEASDVPVIDTFQFAGPFLVPSTVSFRIEWDATGPPEPLGSGNAVPATDPAAFLGMFAPARSTGHFSGAELGFSFASTRGASTDLGYAEIGTERNGVFLP
Ga0364945_0026898_159_449	3300034115	Sediment	VPVIDTFQFANAVSVPATVSFKIEWEATGPPEELGSGNTVPATDPAAFLGTFAPACSTGQFSGAELGFSFASKRGASTDLGGYAQIGTERNGVFLS
Ga0364925_0352483_252_554	3300034147	Sediment	RVRARDVPVIDTFQFSNPFLVPSTVSFNVEWEATGEPEEVGSGDTVPATDKAAFLGRIAPARSTGWFSGAELGFSFESKPGVSTDRGYAQFGTERNGSFL
Ga0364929_0098814_12_344	3300034149	Sediment	MSQSGRRAIVEARDVPVIDTFQFANAVSVPATVSFKIEWEATGPPEELGSGNTVPATDPAAFLGTFAPARSTGQFSGAELGFSFASKRGASTDPLGYAQIGTERNGVFLS
Ga0364933_136949_262_591	3300034150	Sediment	MSRSGRRAIVEARAVPVIDTFQFANAVSVPATVSFKIEWEATGPPEELGSGNTVPATDPAAFLGTFAPARSTGQFSGAELGFSFASKRGASTDLGYAQIGTERNGVFLS
Ga0364935_0233164_188_475	3300034151	Sediment	LPVIDTFQFANAVSVPATVSFKIEWEATGPPEELGSGNTVPATDPAAFLGTFAPARSTGQFSGAELGFSFASKRGASTDPLGYAQIGTERNGVFL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F064073

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences