NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F064066

Metagenome Family F064066

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F064066
Family Type Metagenome
Number of Sequences 129
Average Sequence Length 102 residues
Representative Sequence SDLLADVEVKKNYTIAELADSLFAMTGLARSGNYSQALNTLDTSVATAYRRYPNMEDEDIRFILGIVEGYQRDLRVYNGQNRRSDCGGCR
Number of Associated Samples 100
Number of Associated Scaffolds 129

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.78 %
% of genes near scaffold ends (potentially truncated) 97.67 %
% of genes from short scaffolds (< 2000 bps) 89.92 %
Associated GOLD sequencing projects 85
AlphaFold2 3D model prediction Yes
3D model pTM-score0.74

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (56.589 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere
(14.729 % of family members)
Environment Ontology (ENVO) Unclassified
(48.062 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(69.767 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134.136.138.140.142.144.146.148.150
1GPWSG_02658290
2ICChiseqgaiiDRAFT_20695331
3ICChiseqgaiiFebDRAFT_139962951
4JGI10216J12902_1102992042
5Ga0058689_101864262
6Ga0062593_1001607161
7Ga0062589_1003407341
8Ga0062592_1010687322
9Ga0062591_1014476941
10Ga0065704_103178952
11Ga0065715_103714232
12Ga0065705_106355741
13Ga0070676_104201472
14Ga0070670_1000266772
15Ga0066388_1025980441
16Ga0070677_107299681
17Ga0070666_109430721
18Ga0070680_1010959291
19Ga0070682_1013082581
20Ga0070689_1009579342
21Ga0070691_104340092
22Ga0070687_1005761631
23Ga0070687_1013938611
24Ga0070692_103141982
25Ga0070669_1012643531
26Ga0070675_1014693482
27Ga0070688_1008809592
28Ga0070663_1016014521
29Ga0070662_1009501141
30Ga0070707_1000212151
31Ga0070697_1019374911
32Ga0070672_1011075541
33Ga0070686_1002847262
34Ga0068855_1014807282
35Ga0068855_1026204971
36Ga0068857_1024454751
37Ga0068854_1010842432
38Ga0068854_1019938271
39Ga0070702_1002161261
40Ga0068852_1028051882
41Ga0068859_1013814491
42Ga0068859_1015818311
43Ga0068859_1029279721
44Ga0068864_1007245512
45Ga0068864_1018071851
46Ga0068864_1023238391
47Ga0068866_110479172
48Ga0068861_1004093051
49Ga0068861_1017922521
50Ga0068861_1020326631
51Ga0068858_1003133851
52Ga0068858_1021754761
53Ga0068860_1019653111
54Ga0068862_1000307531
55Ga0068862_1009516032
56Ga0075417_104019561
57Ga0075417_105531162
58Ga0082029_13898902
59Ga0075421_1006426451
60Ga0075431_1008248332
61Ga0075433_100700881
62Ga0075420_1012087541
63Ga0079217_101839152
64Ga0075424_1011458262
65Ga0079216_100004986
66Ga0079216_101298031
67Ga0079219_100894091
68Ga0079219_110742051
69Ga0079218_103332871
70Ga0079218_103640192
71Ga0105250_103468802
72Ga0075418_119891061
73Ga0114129_100897096
74Ga0114129_103215354
75Ga0114129_133235491
76Ga0111538_122682401
77Ga0075423_100230951
78Ga0075423_112073942
79Ga0075423_117958052
80Ga0105249_107913662
81Ga0105249_115573882
82Ga0126305_101395053
83Ga0126377_107241792
84Ga0126377_133502151
85Ga0105239_123156102
86Ga0105239_129006232
87Ga0134127_102024751
88Ga0134127_115705632
89Ga0134127_123665091
90Ga0134127_132268741
91Ga0134122_115221942
92Ga0134121_119485291
93Ga0134121_121528611
94Ga0137443_12177171
95Ga0164299_112884981
96Ga0164305_117403141
97Ga0157375_119942541
98Ga0157380_118864811
99Ga0182007_101433281
100Ga0190265_100210926
101Ga0193708_10914611
102Ga0247681_10488811
103Ga0207680_108666401
104Ga0207660_103669101
105Ga0207662_109505241
106Ga0207646_101825363
107Ga0207694_104436911
108Ga0207650_100464781
109Ga0207659_115898241
110Ga0207659_119118242
111Ga0207690_118621711
112Ga0207711_103965181
113Ga0207712_115334991
114Ga0207703_119840392
115Ga0207708_100834405
116Ga0207708_117399191
117Ga0207641_110828582
118Ga0207676_123174632
119Ga0207675_1001321681
120Ga0207698_108647112
121Ga0209486_100533911
122Ga0209382_109291451
123Ga0209382_111317751
124Ga0268264_119571541
125Ga0310813_115839831
126Ga0307468_1020812331
127Ga0307406_120975371
128Ga0307411_119623601
129Ga0310810_102654061
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 61.02%    β-sheet: 0.00%    Coil/Unstructured: 38.98%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

102030405060708090SDLLADVEVKKNYTIAELADSLFAMTGLARSGNYSQALNTLDTSVATAYRRYPNMEDEDIRFILGIVEGYQRDLRVYNGQNRRSDCGGCRSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.74
Powered by PDBe Molstar

Structural matches with SCOPe domains



 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
56.6%43.4%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Soil
Soil
Terrestrial Soil
Tropical Forest Soil
Serpentine Soil
Switchgrass Rhizosphere
Termite Nest
Soil
Agricultural Soil
Soil
Soil
Hardwood Forest Soil
Tropical Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Populus Rhizosphere
Rhizosphere
Switchgrass Rhizosphere
Corn Rhizosphere
Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Agave
4.7%5.4%3.1%6.2%3.1%6.2%4.7%5.4%14.7%13.2%3.9%3.9%4.7%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
GPWSG_026582902067725003SoilKAAIPLKVHLSYFDVRRKCMVEEVQEARLVPAESESCELLADVEVKKNYTIAQLADSLFEMTGLARRGNYAQALSALDTSVATAYRRYPNMEDGDIRFILDIVEGYRRDLRVYNEHSRKHDCGGCR
ICChiseqgaiiDRAFT_206953313300000033SoilLTQVVMAKFRTESSKASIPVKVRLSYFDVKRRCVVEEVQDLRLVPAENESCDVLADVEVKKNYTIAELADSLFEMTGLARRGDYSQAQNVLDASVATAYRRYPNMEDEDXRFILDIVEGYRRDLRVYNEHSRKFDCGNCR*
ICChiseqgaiiFebDRAFT_1399629513300000363SoilLTQVVMAKFRTESSKASIPVKVRLSYFDVKRRCVVEEVQDLRLVPAENESCDVLADVEVKKNYTIAELADSLFEMTGLARRGDYSQAQNVLDASVATAYRRYPNMEDEDIRFILDIVEGYRRDLKVYNAHSRRFDCGNCR*
JGI10216J12902_11029920423300000956SoilKNFTIAQHADSLFEMTGFARRGNYAQALNALDASVATAYNRYPNMEDGDIRFILDIVEGYRRDLRVYNQHTRKSDCGGCR*
Ga0058689_1018642623300004016AgaveRKCMVEEVQDAQLVPAENDSCELLMDVEVKKNYTIAQLADSLFEMTGFARRGNYSQALNALDASVATAYNRYPNMEDGDIRFILDIVEGYRRDLRVYNQHSRKSDCGGCR*
Ga0062593_10016071613300004114SoilLARSGNYTLAQSVLDVSVSTAYRRYPNMEDEDIRFIIDIVEGYRRDLRVYNEYSRKHDCGSCR*
Ga0062589_10034073413300004156SoilNYTIAELADSLFRMANLARSGNYTLAQSVLDVSVSTAYRRYPNMEDEDIRFIIDIVEGYRRDLRVYNEYSRKHDCGSCR*
Ga0062592_10106873223300004480SoilDLRLVPAERESCDPLVDLEVKKNFTIAELADSLFQMTEFARRGNYTQAQSVLDASLATAQTRYPYKEDEDIRFILDIVEGYRRDLLVYNQFNRRSDCGSCR*
Ga0062591_10144769413300004643SoilAQSFNTQLPVKVRLSYFDVKRKCTVEEVQELRLVPGESDRRDLLSDVEVKKNYTIAELADSLFDMKGLAVRGSYLQAQSALDASIATAYRRYPNMEDADVKFILNIVEGYQRDLKTYNGYQRKSDCGGCR*
Ga0065704_1031789523300005289Switchgrass RhizosphereAELADSLYAMAGLARGGNYSQAQNVLDASLSTAYRRYPNMEDEDIRFILDIVEGYRRDLKVYNEQNRKHDCGSCR*
Ga0065715_1037142323300005293Miscanthus RhizosphereIAGLADSLFQMAGLARNGDYSQALNALDGAVATAYRRYPNMEDEDIRFILGIVEGYQRDLKVYNEQFHRRDCGSCR*
Ga0065705_1063557413300005294Switchgrass RhizosphereFDVKRKCTVEEVQELRLVPAESDRCDLLSDVEVKKNYTIAELADSLFDMKGLAVRGSYLQAQNALDASIATAYRRYPNMEDADVKFILNIVEGYQKDLKTYNGYQRKSDCGGCR*
Ga0070676_1042014723300005328Miscanthus RhizosphereNGLTQVVLAKFRAGDVRAPMPVKIRLSYFDVKRKCVVEEVQEARLVPAENDSCELLSDVEVKKNYTIAQLADSLFEMTGLARRGNYTQALNTLDTSVTSAYRRYPNMEDTDIRFILDIVEGYRRDLRVFNQQSRHSDCGGCR*
Ga0070670_10002667723300005331Switchgrass RhizosphereAELANSLYEMTSFARRGNFSLAQNTLDASISTAYQRYPNMEDEDIKFILGIVEGYQRDLKVYNGYNRRSDCGGCR*
Ga0066388_10259804413300005332Tropical Forest SoilGLTQVIVAKFRAESLKGAMPVKVRLSYVDVKRNCTVSEVQELRLVPSDGESCELLADVEVKKNYTIAELADSLFQMTGLARSGNYAKAQNTLDASVATAYRRYPNMEDQDIKFILDIVEGYRRDLRVYSRQSDCGGCR*
Ga0070677_1072996813300005333Miscanthus RhizosphereVEEVQDLQLVPAERGTSDLLADVEVKKNYTIAELADSLFAMTGLARSGNYSQALNTLDASVATAYRRYPNMEDEDIRFILEIVEGYQRDLRVYNGQNRRSDCGGCR*
Ga0070666_1094307213300005335Switchgrass RhizosphereVEVKKNYTIAELADSLFAMTGLARSGNYSQALNTLDASVATAYRRYPSMEDQDIRFILEIVEGYQRDLRVYNQQNRRHDCGGCR*
Ga0070680_10109592913300005336Corn RhizosphereIAQLADSLFEMTGLARRGNYTQALNTLDTSVTSAYRRYPNMEDTDIRFILDIVEGYRRDLRVFNQQSRHSDCGGCR*
Ga0070682_10130825813300005337Corn RhizosphereVEEVQDLQLVPAERDPSDLLADVEVKKNYTIAELADSLFAMTGLARSGNYSQALNTLDASVATVYRRYPNTEDEDIRFILAIVEGYQRDLRVYNGQNRRSDCGGCR*
Ga0070689_10095793423300005340Switchgrass RhizosphereRRDLLSDVEVKKNYTIAELADSLFDMKGLAVRGSYLQAQNALDASIATAYRRYPNMEDADVKFILNIVEGYQRDLKTYNGYQRKSDCGGCR*
Ga0070691_1043400923300005341Corn, Switchgrass And Miscanthus RhizosphereGESDRRDLLSDVEVKKNYTIAELADSLFDMKGLAVRGSYLQAQNALDASIATAYRRYPNMEDADVKFILNIVEGYQRDLKTYNGYQRKSDCGGCR*
Ga0070687_10057616313300005343Switchgrass RhizosphereDVEVKKNYTIAELADSLFDMKGLAVRGSYLQAQNALDASIATAYRRYPNMEDADVKFILNIVEGYQRDLKTYNGYQRKSDCGGCR*
Ga0070687_10139386113300005343Switchgrass RhizosphereRLTYYDVKRRCRVEEVQEVRLMSTESESCDLLADVEVKKNYTIAELADSLFQMAGLARNGDYSQALNALDGAVATACRRYPNMEDEDIRFILGIVEGYQRDLKVYNEQFHRRDCGSCR*
Ga0070692_1031419823300005345Corn, Switchgrass And Miscanthus RhizosphereSVANPTTVKVRLSYFDVKRKCKVEEVQDLQLVLAERDSSDLLADVEVKKNYTIAELADSLFAMTGLARSGNYSQALNALDASVATAYRRYPNMEDEDIRFILGIVEGYQRDLRVFNEQSRRHDCGGCR*
Ga0070669_10126435313300005353Switchgrass RhizospherePGESDRRDLLSDVEVKKNYTIAELADSLFDMKGLAVRGSYLQAQNALDASIATAYRRYPNMEDADVKFILNIVEGYQRDLKTYNGYQRKSDCGGCR*
Ga0070675_10146934823300005354Miscanthus RhizosphereELADSLFDMKGLAVRGSYLQAQNALDASIATAYRRYPNMEDADVKFILNIVEGYQRDLKTYNGYQRKSDCGGCR*
Ga0070688_10088095923300005365Switchgrass RhizospherePAERDASDLLADVEVKKNYTIAELADSLFAMTGLARSGNYSQALNTLDASVATAYRRYPNMEDQDIRFILEIVEGYQRDLRVYNQQNRRHDCGGCR*
Ga0070663_10160145213300005455Corn RhizosphereVSNPAPVKVRLTYFDVKRQCTVEEVQDLRLVPVESDPCDLLADVEVKKNYTIAVLADSLSEMKSLAQRGSFAQALNALDASVSTAYQRYPNMEDEDIKFILDIVNGYRRDLKIYTDYQRKSDCGSCR*
Ga0070662_10095011413300005457Corn RhizosphereAPMPVKIRLSYFDVKRKCVVEEVQEARLVPAENDSCELLSDVEVKKNYTIAQLADSLFEMTGLARRGNYTQALNTLDTSVTSAYRRYPNMEDTDIRFILDIVEGYRRDLRVFNQQSRHSDCGGCR*
Ga0070707_10002121513300005468Corn, Switchgrass And Miscanthus RhizosphereSDSCDVLADVEVKKNYTIAELADSLYAMAGLARGGNYSQAQNVLDASVSTAYRRYPNMEDTDIRFILDIVEGYRRDLKVYNEYSRKHDCGSCR*
Ga0070697_10193749113300005536Corn, Switchgrass And Miscanthus RhizosphereLVPAENDSCDVLADVEVKKNYTIAELADSLYAMAGLARGGNYSQAQNVLDGSVSTAYHRYPNMEDEDIRFILDIVEGYRRDLKVYNEYSRKHDCGSCR*
Ga0070672_10110755413300005543Miscanthus RhizosphereEVKKNYTIAELADSLFAMTGLARSGNYSQALNTLDASVATAYRRYPNMEDQDIRFILEIVEGYQRDLRVYNQQNRRHDCGGCR*
Ga0070686_10028472623300005544Switchgrass RhizosphereKKNYTIAQLADSLFEMTGLARRGNYTQALNTLDTSVTSAYRRYPNMEDTDIRFILDIVEGYRRDLRVFNQQSRHSDCGGCR*
Ga0068855_10148072823300005563Corn RhizosphereVVMAKFRTESLTNPLPVKVRLSYFDVKRKCKVEEVQELQLLPAENDSCDLLADVEVKKNYTIAELADSLFQMAGLARSGNYPQALNALDGSVATAYRRYPNMEDEDIRFILGIVEGYQRDLKVYNEQFHRRDCGGCR*
Ga0068855_10262049713300005563Corn RhizosphereRRKCTVEEVQELRLEPAESDSCDLLVDVEVKKNYTIAELADSLFAMAGFARSGNYSQAQNVLDSSVTAAYQRYPHMEDEDIRFILNIVEGYQRDLKVYNAHYRKGECGGCR*
Ga0068857_10244547513300005577Corn RhizosphereSMTKPMAVKVRLSYFDVKRKCRVEEVQDLQLVPAERDASDLLADVEVKKNYTIAELADSLFAMTGLARSGNYSQALNTLDASVATAYRRYPNMEDEDIRFILAIVEGYQRDLRVYNGQNRRSDCGGCR*
Ga0068854_10108424323300005578Corn RhizosphereRLVPAENDSCELLNDVEVKKNFTIAQLADSLFEMTGFARRGNYSQALNAVETSVATAYRRYPNMEDNDIRFILDIVEGYRRDLKVYNDYSRPRSDCGGCR*
Ga0068854_10199382713300005578Corn RhizosphereTESLTNPLPVKVRLSYFDVKRKCKVEEVQELQLLPAENDSCDLLADVEVKKNYTIAELADSLFQMAGLARSGNYPQALNALDGSVATAYRRYPNMEDEDIRFILGIVEGYQRDLKVYNEQFHRRDCGGCR*
Ga0070702_10021612613300005615Corn, Switchgrass And Miscanthus RhizosphereLVPSENDSCELLADVEVKKNYTIAELADSLFRMANLARSGNYTLAQSVLDVSVSTAYRRYPNMEDEDIRFIIDIVEGYRRDLRVYNEYSRKHDCGSCR*
Ga0068852_10280518823300005616Corn RhizosphereSDLLADVEVKKNYTIAELADSLFAMAGLARSGNYSQALNTLNASVATAYRRYPNMEDEDIRFILGIVEGYQRDLRVYCR*
Ga0068859_10138144913300005617Switchgrass RhizosphereGLTQVVMAKFRTDSVGNTLPVKVRLSYFDVKRKCRVEEVQDLQLVPAERDTSDLLADVEVKKNYTIAELADSLFAMTGLARSGNYSQALNTLDASVATAYRRYPNMEDEDIRFILAIVEGYQRDLRVYTGQNRRSDCGGCR*
Ga0068859_10158183113300005617Switchgrass RhizosphereLTQVVMARFRTDSVGTTLPVKVRLTYFDVKRKCRVEEVQDLQLVPAERDTSDLLADVEVKKNYTIAELADSLFAMTGLARSGNYSQALNTLDASVATAYRRYPSMEDEDIRFILGIVEGYQRDLRVCNHR*
Ga0068859_10292797213300005617Switchgrass RhizosphereDVEVKKNYTIAQLADSLFEMTGLARRGNYTQALNTLDTSVASAYRRYPNMEDTDIRFILDIVEGYRRDLRVFNQQSRHSDCGGCR*
Ga0068864_10072455123300005618Switchgrass RhizosphereVLAKFRAGDVRAPMPVKIRLSYFDVKRKCVVEEVQEARLVPAENDSCELLSDVEVKKNYTIAQLADSLFEMTGLARRGNYTQALNTLDTSVTSAYRRYPNMEDTDIRFILDIVEGYRRDLRVFNQQSRHSDCGGCR*
Ga0068864_10180718513300005618Switchgrass RhizosphereVRLSYFDVKRKCTVEEVQELRLVPGESDRRDLLSDVEVKKNYTIAELADSLFDMKGLAVRGSYLQAQNALDASIATAYRRYPNMEDADVKFILNIVEGYQRDLKTYNGYQRKSDCGGCR*
Ga0068864_10232383913300005618Switchgrass RhizosphereNNGLTQVIMAKFKAQSFNTQLPVKVRLSYFDVKRKCTVEEVQELRLVPGESDRRDLLSDVEVKKNYTIAELADSLFDMKGLAVRGSYLQAQNALDASIATAYRRYPNMEDADVKFILNIVEGYQRDLKTYNGYQRKSDCGGCR*
Ga0068866_1104791723300005718Miscanthus RhizosphereVQDLQLVPAERDTSDLLADVEVKKNYTIAELADSLFAMTGLARSGNYSQALNTLDASVATAYRRYPNMEDEDIRFILGIVEGYQRDLRVYTEQNRR*
Ga0068861_10040930513300005719Switchgrass RhizosphereDSLFAMTGLARSGNYSQALNTLDASVATAYRRYPNMEDEDIRFILEIVEGYQRDLRVYNGQNRRDCGGCR*
Ga0068861_10179225213300005719Switchgrass RhizosphereLSYFDVKRKCPVEEVQELRLVPSENDSCELLADVEVKKNYTIAELADSLFRMANLARSGNYTLAQSVLDVSVSTAYRRYPNMEDEDIRFIIDIVEGYRRDLRVYNEYSRKHDCGSCR*
Ga0068861_10203266313300005719Switchgrass RhizosphereVEVKKNYTIAELADSLFVMTGLARSGNYSQALNTLDASVATAYRRYPSMEDEDIRFILGIVEGYQRDLRVYNGQNRRHDCGGCR*
Ga0068858_10031338513300005842Switchgrass RhizosphereVVMAEFRADAVKGALPVKVRLSYFDVKRKCPVEEVQELRLVPSENDSCELLADVEVKKNYTIAELADSLFRMANLARSGNYTLAQSVLDVSVSTAYRRYPNMEDEDIRFIIDIVEGYRRDLRVYNEYSRKHDCGSCR*
Ga0068858_10217547613300005842Switchgrass RhizosphereVKVLLSYYDVKRKCTVQEVQELRLVPAESDSCELLADVEVKKNYTIAELADSLFQMAGLARSGQYAQAQNVLDASVSTAYRRYPNMEDEDIRFIIDIVDGYRRDLRVYNEFSHKHDCGSCR*
Ga0068860_10196531113300005843Switchgrass RhizosphereDVEVKKNYTIAELADSLFQMAGLARSVQYAQAQNVLDASVSTAYRRYPNMEDEDIRFIIDIVDGYRRDLRVYNEFSHKHDCGSCR*
Ga0068862_10003075313300005844Switchgrass RhizosphereVLAKFRAGDVRAPMPVKIRLSYFDVKRKCVVEEVQEARLVPAENDSCELLSDVEVKKNYTIAQLADSLFEMTGLARRGNYTQALNTLDTSVASAYRRYPNMEDTDIRFILDIVEGYRRDLRVFNQQSRHSDCGGCR*
Ga0068862_10095160323300005844Switchgrass RhizosphereSDLLADVEVKKNYTIAELADSLFAMTGLARSGNYSQALNTLDASVATAYRRYPNMEDEDIRFILEIVEGYQRDLRVYNRHDCGGCR*
Ga0075417_1040195613300006049Populus RhizosphereYYDVRRKCTVEEVQELRLEPVESDSCDLLVDVEVKKNYTIAELADSLFAMAGLARSGNYSQAQNVLDSSVTAAYQRYPHMEDEDIRFILNIVEGYQRDLKVYNAHYRKGECGGCR*
Ga0075417_1055311623300006049Populus RhizosphereSYHDVKRNCLVTEVQELRLVPSDGESCELLADVEVKKNYTIAELADALFQMSGLARSGNYAQAQNALDGSVATAYRRYPNMEDQDIKFILDIVEGYRRDLRVYNAQSHRPDCGGCR*
Ga0082029_138989023300006169Termite NestSPMPVKVFLSYYDVKRKCNVEEVQEARLVPAETDSCELLSDVEVKKNYTIAQLADSLFEMAGLARRGSYSQALNALDASVATAYQRYPNMEDGDIRFILDIVEGYRRDLRVFSGNPCSRCR*
Ga0075421_10064264513300006845Populus RhizospherePRPPVKVRLSYFDVKRKCVVEEVQELRLVPSERDSCDSLVDLEVKKNYTIAELADSLFQMTGFARGGNYSQAQNVLDASLASAHTRYPYMEDEDIRFILDIVEGYRRDLQMYNGHRRIGDCVGCR*
Ga0075431_10082483323300006847Populus RhizosphereDSLLEMTGLARRGRYSQALNSLDTSAALAYRRYPNMEDGDIRFILDIVEGYRRDLRVFNQHSRQSDCGGCR*
Ga0075433_1007008813300006852Populus RhizosphereKRKCVVEEVQELRLVPSERDSCDSLVDLEVKKNTIAELADSLFQMTGFARGGNYSQAQNVLDASLASAHTRYPYMEDEDVRFILDIVEGYRRDLQMYNGHRRIGDCGGCR*
Ga0075420_10120875413300006853Populus RhizosphereEVKKNFTIAELADSLFSMAGLARGGQYLQAQNTLDASVATAYRRYPNMEDHDIRFILDIVEGYRRDLKVYNEHSRRSECGGCR*
Ga0079217_1018391523300006876Agricultural SoilQELQLVPAEDETCDLLADVEVKKNYTIAELADSLLEMTGLARRGSYSQAQSVLDASVATAYRRYPNMEDEDIRFILGIVEGYRRDLKVYNEHSRKFDCGNCR*
Ga0075424_10114582623300006904Populus RhizosphereVRLSYFDVKRKCVVEEVQELRLVPSERDSCDSLVDLEVKKNTIAELADSLFQMTGFARGGNYSQAQNVLDASLASAHTRYPYMEDEDVRFILDIVEGY
Ga0079216_1000049863300006918Agricultural SoilVKKNYTIAQLADSLLEMTGLARRGRYSQALNALDTSAALAYRRYPNMEDGDIRFILDIVEGYRRDLRVFNQHSRQSDCGGCRQ*
Ga0079216_1012980313300006918Agricultural SoilEMQELQLVPAEDETCDLLADVEVKKNYTIAELADSLLEMTGLARRGSYSQAQSVLDASVATAYRRYPNMEDEDIRFILGIVEGYRRDLKVYNEHSRKFDCGNCR*
Ga0079219_1008940913300006954Agricultural SoilYFDVKRKCKVEEVQELQLLPAENDSCDLLADVEVKKNYTIAELADSLFQMAGLARSGNYPQALNALDGSVATAYRRYPNMEDEDIRFILGIVEGYQRDLKVYNEQFHRRDCGGCR*
Ga0079219_1107420513300006954Agricultural SoilQMAGLARNGNYAQAQNVLEASVSTAYRRYPNMEDEDIRFIIDIVEGYRRDLRVYNEFSHKHDCGSCR*
Ga0079218_1033328713300007004Agricultural SoilLFEMTGFARRGNYSQALNTLDASVATAYNRYPNMEDGDIRFILDIVEGYRRDLRVYNQQSRKSDCGGCR*
Ga0079218_1036401923300007004Agricultural SoilLSYYDVRRKCMVEDVQEARLVLAESDSCDLLADVEVKKNYTIAQLADSLFEMTGLARRGNYSQALSALDASVRSAYHRYPNMEDGDIRFILDIVEGYRRDLRVYNQHSSKHDCGGCR*
Ga0105250_1034688023300009092Switchgrass RhizosphereDSLFAMTGLARSGNYSQALNTLDAWVATAYRRYPNMEDEDIRFILEIVEGYQRYLRLYNGQNRRDCGGCR*
Ga0075418_1198910613300009100Populus RhizosphereELADSLFRMANVARTGNYALAQSVLDASVSTAYRRYPNMEDEDIRFIIDIVEGYRRDLRVYNEYSRKRDCGTCR*
Ga0114129_1008970963300009147Populus RhizosphereVVEEVQELRLVPSERDSCDSLVDLEVKKNTIAELADSLFQMTGFARGGNYSQAQNVLDASLASAHTRYPYMEDEDVRFILDIVEGYRRDLQMYNGHRRIGDCVGCR*
Ga0114129_1032153543300009147Populus RhizosphereENDSCELLADVEVKKNYTIAELADSLFRMANVARTGNYALAQSVLDASVSTAYRRYPNMEDEDIRFIIDIVEGYRRDLRVYNEYSRKRDCGTCR*
Ga0114129_1332354913300009147Populus RhizosphereEVKKNYTIAELADSLFDMTGLARRGNYSQALNALDASVSTAYRRYPNMEDEDIRFILDIVQGYQRDLRVFTAHSPRSDCGSCR*
Ga0111538_1226824013300009156Populus RhizosphereVQEARLVPAENDSCELLADVEVKKNYTIAQLADSLFEMTGLARRGNYSQALNALDASVATAYQRYPNMEDGDIRFILDIVEGYRRDLRVYHQHSRQTDCGGCR*
Ga0075423_1002309513300009162Populus RhizosphereLFQMTGFARGGNYSQAQNVLDASLASAHTRYPYMEDEDVRFILDIVEGYRRDLQMYNGHRRIGDCVGCR*
Ga0075423_1120739423300009162Populus RhizosphereEETQQLKLVPSEGGSCDLLADVEVKKNYTIAELADSLFAMAGLARGGNYSLAQNTLDASVATAYRRYPNMEDADIRFILDIVEGYRRDLKVYNEHSRGHECGGCR*
Ga0075423_1179580523300009162Populus RhizosphereDLLSDVEVKKNYTIAELADSLFDMKGLAVRGSYLQAQNALDASIATAYRRYPNMEDADVKFILNIVEGYQRDLKTYNGYQRKSDCGGCR*
Ga0105249_1079136623300009553Switchgrass RhizospherePVKVRLSYFDVKRKCTVEEVQELRLVPGESDRRDLLSDVEVKKNYTIAELADSLFDMKGLAVRGSYLQAQNALDASIATAYRRYPNMEDADVKFILNIVEGYQRDLKTYNGYQRKSDCGGCR*
Ga0105249_1155738823300009553Switchgrass RhizosphereDSCELLADVEVKKNYTIAELADSLFQMAGLARGGNYPQALNALDASVATAYRRYPNMEDEDIRFILGIVEGYQRDLRVFNEQFRRRDCGGCR*
Ga0126305_1013950533300010036Serpentine SoilYYDVKRKCLVEEVQEVRVIPAERDSCELLADMEVKKNYTIAELADSLFQMAGLARSGNYVQAKMELDTSVTSAYRRYPNMEDLDIKFILDIIEGYRRDLSVYNDLPRKHDCGGCR*
Ga0126377_1072417923300010362Tropical Forest SoilSDLLADVEVKKNYTIAELADSLFAMTGLARSGNYSQALNTLDTSVATAYRRYPNMEDEDIRFILGIVEGYQRDLRVYNGQNRRSDCGGCR*
Ga0126377_1335021513300010362Tropical Forest SoilELADSLYAMAGLARGGNYSQAQNVLDASVSTAYRRYPNMEDEDIRFILDIVEGYRRDLRVYNEQNRKHDCGSCR*
Ga0105239_1231561023300010375Corn RhizosphereDLLADVEVKKNYTIAELADSLFQMAGLARSGDYSQALNALDGAVATAYLRYPNMEDEDIRFILGIVEGYQRDLKVYNEQFHRRDCGSCR*
Ga0105239_1290062323300010375Corn RhizosphereYTIAELADSLFAMAGFARSGNYSQAQNVLDSSVTAAYQRYPHMEDEDIRFILNIVEGYQRDLKVYNAHYRKGECGGCR*
Ga0134127_1020247513300010399Terrestrial SoilRFARRGNYSSALSVLDRSAASAYSRYPSMEDGDIRFILDIVEGYRRDLRVFTQHSRQSDCGGCRN*
Ga0134127_1157056323300010399Terrestrial SoilSCDLLADVEVKKNFTIAELADSLFSMAGLAKSGQYLQAQNALEASVATAYRRYPNMEDQDIRFILDIVEGYRRDLKVYNQYSRKSECGGCR*
Ga0134127_1236650913300010399Terrestrial SoilNFTIAELANSLYEMTEQARRGNYSLAQNTLDASISTAYRRYPNMEDEDIKFILGIVEGYQRDLRVYNGYNRRSDCGGCR*
Ga0134127_1322687413300010399Terrestrial SoilSLFQMAGLARGGNYPQALNTLYASVATAYRRYPNMEDEDIRFILEIDEGYQRDLRVYNEQFRRHDCGGCR*
Ga0134122_1152219423300010400Terrestrial SoilYFDVKRKCRVEEVQELRLVPSERDSCDLLADVEVKKNYTIAELADSLSDMRGLAVRGNYLQAQNALDGSIATAYRRYPNMEDADLRFILNIVEGYQRDLRAYNGYPRREECGGCR*
Ga0134121_1194852913300010401Terrestrial SoilELADSLFEMAGLARSGQYAQAQNVLDASVSTAYRRYPNMEDEDIRFIVDIVDGYRRDLRVYNEYSHKHDCGSCR*
Ga0134121_1215286113300010401Terrestrial SoilVQELRLVPGESDRRDLLSDVEVKKNYTIAELADSLFDMKGLAVRGSYLQAQNALDASIATAYRRYPNMEDADVKFILNIVEGYQRDLKTYNGYQRKSDCGGCR*
Ga0137443_121771713300011433SoilSDSCELLSDVEVKKNFTIAELADSLFEMSGFARRGNHSQAQNALEASVATAYRRYPNMEDQDIRFILDIVQGYQRDLKAYNEYYRKSNCGGCR*
Ga0164299_1128849813300012958SoilLLSDVEVKKNYTIAELADSLFDMKGLAVRGSYLQAQNALDASIATAYRRYPNMEDADVKFILNIVEGYQRDLKTYNGYQRKSDCGGCR*
Ga0164305_1174031413300012989SoilKAQSFNTQLPVKVRLSYFDVKRKCTVEEVQELRLVPGESDRRDLLSDVELKKNYTIAELADSLFDMKGLAVRGSYLQAQNALDASIATAYRRYPNMEDADVKFILNIVEGYQRDLKTYNGYQRKSDCGGCR*
Ga0157375_1199425413300013308Miscanthus RhizosphereELRLVPGESDRRDLLSDVEVKKNYTIAELADSLFDMKGLAVRGSYLQAQNALDASIATAYRRYPNMEDADVKFILNIVEGYQRDLKTYNGYQRKSDCGGCR*
Ga0157380_1188648113300014326Switchgrass RhizosphereQVVMAKFRTDSVGYTLPVKVRLTYFDVKRKCKVEEVQDLQLVPAERDTSDLLADVEVKKNYTIAELADSLFAMTGLARSGNYSQALNTLDASVATAYRRYPNMEDEDIRFILAIVEGYQRDLRVYNGQNRRSDCGGCR*
Ga0182007_1014332813300015262RhizosphereFRTDLVGYELPVKVRLTYYDVKRRCRVEEVQEVRLMSTESESCDLLADVEVKKNYTIAELADSLFQMAGLARNGDYSQALNALDGAVATAYLRYPNMEDEDIRFILGIVEGYQRDLKVYNEQFHRRDCGSCR*
Ga0190265_1002109263300018422SoilVKVRLSYFDVKRNCMVEEVQDLRLVPAESDSCDLLMDVEVKKNYTIAELADSLFAMTGLARRGNYSQAQNTLDASVATAYRRYPNMEDPDIKFILSIVEGYQRDLKTFNGYSRKTDCVRC
Ga0193708_109146113300021408SoilLPGEADSCDILADVEVKKNYTIAELAQSLFDMREAANRRNFAQAEGLLNSSVSTAYGRYPNMEDGDIRFILNIVEGYQRDLRTFNGSNPGPDCGGGCR
Ga0247681_104888113300024310SoilVKVRLSYFDVKRKCIVEDVQSLSLVPAERDICDLLADVEVKKNFTIAELAQSLYDMTESAKRRDFTAAGNLLNASIASAYRRYPNMEDTDIRFILNIVEEYDRDLKTFNGYNRNDGCNSGCR
Ga0207680_1086664013300025903Switchgrass RhizosphereQDLQLIPAERDASDLLADVEVKKNYTIAELADSLFAMTGLARSGNYSQALNTLDASVATAYRRYPNMEDQDIRFILEIVEGYQRDLRVYNQQNRRHDCGGCR
Ga0207660_1036691013300025917Corn RhizosphereIAQLADSLFEMTGLARRGNYTQALNTLDTSVTSAYRRYPNMEDTDIRFILDIVEGYRRDLRVFNQQSRHSDCGGCR
Ga0207662_1095052413300025918Switchgrass RhizosphereRLTYYDVKRRCRVEEVQEVRLMSTESESCDLLADVEVKKNYTIAELADSLFQMAGLARNGDYSQALNALDGAVATACRRYPNMEDEDIRFILGIVEGYQRDLKVYNEQFHRRDCGGCR
Ga0207646_1018253633300025922Corn, Switchgrass And Miscanthus RhizosphereVKRKCAVEEVQELRLAPAESDSCDVLADVEVKKNYTIAELADSLYAMAGLARGGNYSQAQNVLDASVSTAYRRYPNMEDTDIRFILDIVEGYRRDLKVYNEYSRKHDCGSCR
Ga0207694_1044369113300025924Corn RhizosphereEKDSCDVLADVEVKKNYTIAELADSLYAMAGLARGGNYSQAQNVLDASVSTAYRRYPNMEDEDIRFILDIVEGYRRDLRVYNEQNRRHDCGSCR
Ga0207650_1004647813300025925Switchgrass RhizosphereIAELANSLYEMTSFARRGNFSLAQNTLDASISTAYQRYPNMEDEDIKFILGIVEGYQRDLKVYNGYNRRSDCGGCR
Ga0207659_1158982413300025926Miscanthus RhizosphereLSDVEVKKNYTIAELADSLFDMKGLAVRGSYLQAQNALDASIATAYRRYPNMEDADVKFILNIVEGYQRDLKTYNGYQRKSDCGGCR
Ga0207659_1191182423300025926Miscanthus RhizosphereADVEVKKNYTIAELADSLFAMAGLARSGNYSQALNTLNASVATAYRRYPNMEDEDIRFILGIVEGYQRDLRVYCR
Ga0207690_1186217113300025932Corn RhizosphereVEVKKNFTIAQLADSLFEMTAFARRGNYSQALNAVETSVATAYRRYPNMEDKDIRFILDIVEGYRRDLKVYNDYSRPKSDCARCWRTSPT
Ga0207711_1039651813300025941Switchgrass RhizosphereRIAGKSVLPVKVHLSYFDLKRNCMVNEMQELRLAPADGESCDLLADVEVKKNYTIAELADSLFQMTGLARSGNYAQAQNALDASVATAYRRYPNMEDQDIKFILDIVEGYRRDLRVFTGYSRQSDCGGCRK
Ga0207712_1153349913300025961Switchgrass RhizosphereLADVEVKKNYTIAELADSLFQMAGLARGGNYPQALNALDASVATAYRRYPNMEDEDIRFILGIVEGYQRDLRVFNEQFRRRDCGGCR
Ga0207703_1198403923300026035Switchgrass RhizosphereVKVLLSYYDVKRKCTVQEVQELRLVPAESDSCELLADVEVKKNYTIAELADSLFQMAGLARSGQYAQAQNVLDASVSTAYRRYPNMEDEDIRFIIDIVDGYRRDLRVYNEFSHKHDCGSC
Ga0207708_1008344053300026075Corn, Switchgrass And Miscanthus RhizosphereELRLEPAERDSCELLADVEVKKNYTIAELADSLFAMAGLARSGNYPQAQQVLDTSVNAAYQRYPHMEDEDIRFILDIVEGYRRDLKVYNAHYRKGECGGCR
Ga0207708_1173991913300026075Corn, Switchgrass And Miscanthus RhizosphereYDVRRKCMVDEVQDARLVPAENESCELLTDVEVKKNYTIAQLADSLFEMTGFARRGNYSQALNALDASVATAYNRYPNMEDNDIRFILDIVEGYRRDLKVYNDYSRPKSDCGGCR
Ga0207641_1108285823300026088Switchgrass RhizosphereVQEVRLMSTESESCDLLADVEVKKNYTIAELADSLFQMAGLARSGDYSQALNALNGSVATAYRRYPNMEDEDIRFILGIVEGYQRDLKVYNEQFHRRDCGSCR
Ga0207676_1231746323300026095Switchgrass RhizosphereFDVKRKCTVEEVQELRLVPGESDRRDLLSDVEVKKNYTIAELADSLFDMKGLAVRGSYLQAQNALDASIATAYRRYPNMEDADVKFILNIVEGYQRDLKTYNGYQRKSDCGGCR
Ga0207675_10013216813300026118Switchgrass RhizosphereQLVPAGRDTSDLLADVEVKKNYTIAELADSLFAMTGLARSGNYSQALNTLDASVATAYRRYPNMEDEDIRFILEIVEGYQRDLRVYNGQNRRDCGGCR
Ga0207698_1086471123300026142Corn RhizosphereVQDLQLVPAERGTSDLLADVEVKKNYTIAELADSLFAMAGLARSGNYSQALNTLNASVATAYRRYPNMEDEDIRFILGIVEGYQRDLRVYCR
Ga0209486_1005339113300027886Agricultural SoilTIAELADSLFEMTGLARRGSYSQAQSVLDASVATAYRRYPNMEDEDIRFILGIVEGYRRDLKVYNEHSRKFDCGNCR
Ga0209382_1092914513300027909Populus RhizosphereRKCMVEEVQELRLEPAESESCDVLADVEVKKNFTIAELADSLFSMAGLARGGQYLQAQNTLDASVATAYRRYPNMEDQDIRFILDIVEGYRRDLKVYNEHSRRSECGGCR
Ga0209382_1113177513300027909Populus RhizospherePRPPVKVRLSYFDVKRKCVVEEVQELRLVPSERDSCDSLVDLEVKKNYTIAELADSLFQMTGFARGGNYSQAQNVLDASLASAHTRYPYMEDEDIRFILDIVEGYRRDLQMYNGHRRIGDCVGCR
Ga0268264_1195715413300028381Switchgrass RhizosphereKNYTIAELADSLYAMAGLARSGNYSQAQNVLDASVSTAYRRYPNMEDEDIRFILDIVEGYRRDLRVYNEQNRRHDCGSCR
Ga0310813_1158398313300031716SoilKCPVEEVQELRLVPSENESCELLADVEVKKNYTIAELADSLFRMANLARSGNYTLAQSVLDVSVSTAYRRYPNMEDEDIRFIIDIVEGYRRDLRVYNEYSRKHDCGSCR
Ga0307468_10208123313300031740Hardwood Forest SoilLTQVIMAKFKAQSFNTQLPVKVRLSYFDVKRKCTVEEVQELRLVPAESDRRDLLSDVEVKKNYTIAELADSLFDMKGLAVRGSYLQAQNALDASIATAYRRYPNMEDADVKFILNIVEGYQKDLKTYNGYQRKSDCGGCR
Ga0307406_1209753713300031901RhizosphereLTDVEVKKNYTIAELADSLFQMTGLARSGNYAQALNALDGGVGTAYRRYPNMEDQDIKFILDIVEGYRRDLRVHTAQSHRPDCGGCR
Ga0307411_1196236013300032005RhizospherePAEGESCDPLVDLEVKKNHTIAELADSLFQMTGLARAGNYSQAQSVLDASVATAHTRYPYMEDEDIRFIFDIVEGYRRDLQVYNQHSRRNECGSCR
Ga0310810_1026540613300033412SoilADVEVKKNYTIAELADSLFRMANLARSGNYTLAQSVLDVSVSTAYRRYPNMEDEDIRFIIDIVEGYRRDLRVYNEYSRKHDCGSCR


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.