Metagenome / Metatranscriptome Family F064055

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F064055
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	126 residues
Representative Sequence	MASKLKLLSPIIVPLLVSPTLGTELTYKEYAKASEIWKRGFVFGISRYMSAVAQPDEEPPYPVRTAFQRCLGDSTDSVLVRHVEAYVAAHPGGSNGPMTAVVVRALFDLCRAEISKIKPPTPIPSQR
Number of Associated Samples	101
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	52.71 %
% of genes near scaffold ends (potentially truncated)	46.51 %
% of genes from short scaffolds (< 2000 bps)	93.02 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.68

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (21.705 % of family members)
Environment Ontology (ENVO)	Unclassified (33.333 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (64.341 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 54.84% β-sheet: 2.58% Coil/Unstructured: 42.58%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.68
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.68
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF00188	CAP	10.85
PF13424	TPR_12	2.33
PF08239	SH3_3	1.55
PF00732	GMC_oxred_N	1.55
PF13460	NAD_binding_10	1.55
PF01068	DNA_ligase_A_M	1.55
PF01545	Cation_efflux	1.55
PF03466	LysR_substrate	1.55
PF03411	Peptidase_M74	0.78
PF13676	TIR_2	0.78
PF05231	MASE1	0.78
PF13374	TPR_10	0.78
PF04519	Bactofilin	0.78
PF12686	DUF3800	0.78
PF05015	HigB-like_toxin	0.78
PF03480	DctP	0.78
PF00903	Glyoxalase	0.78
PF00155	Aminotran_1_2	0.78
PF05598	DUF772	0.78
PF13432	TPR_16	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG2340	Spore germination protein YkwD and related proteins with CAP (CSP/antigen 5/PR1) domain	Cell cycle control, cell division, chromosome partitioning [D]	10.85
COG0053	Divalent metal cation (Fe/Co/Zn/Cd) efflux pump	Inorganic ion transport and metabolism [P]	1.55
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	1.55
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	1.55
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	1.55
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	1.55
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	1.55
COG0642	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.78
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	0.78
COG3447	Integral membrane sensor domain MASE1	Signal transduction mechanisms [T]	0.78
COG3549	Plasmid maintenance system killer protein	Defense mechanisms [V]	0.78
COG3770	Murein endopeptidase MepA (D-alanyl-D-alanine-endopeptidase)	Cell wall/membrane/envelope biogenesis [M]	0.78
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	96.90 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.78 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	96.12 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.78 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	8.53 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.33 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.78 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	8.53 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.78 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.78 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_100248011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	770	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101789754	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1836	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_103946640	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	543	Open in IMG/M
3300000789\|JGI1027J11758_12528912	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	874	Open in IMG/M
3300000955\|JGI1027J12803_101269890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	799	Open in IMG/M
3300000956\|JGI10216J12902_121222683	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	513	Open in IMG/M
3300001081\|JGI12662J13196_1020417	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	549	Open in IMG/M
3300001545\|JGI12630J15595_10017639	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1520	Open in IMG/M
3300002245\|JGIcombinedJ26739_100036116	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4415	Open in IMG/M
3300002245\|JGIcombinedJ26739_100332722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1400	Open in IMG/M
3300002245\|JGIcombinedJ26739_101242564	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	635	Open in IMG/M
3300003505\|JGIcombinedJ51221_10199105	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	813	Open in IMG/M
3300003505\|JGIcombinedJ51221_10324324	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	626	Open in IMG/M
3300004157\|Ga0062590_100330965	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1206	Open in IMG/M
3300004479\|Ga0062595_100111691	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1486	Open in IMG/M
3300004643\|Ga0062591_100200772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1464	Open in IMG/M
3300005093\|Ga0062594_100313385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1203	Open in IMG/M
3300005332\|Ga0066388_103070233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	853	Open in IMG/M
3300005332\|Ga0066388_103793476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	771	Open in IMG/M
3300005332\|Ga0066388_106127840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	607	Open in IMG/M
3300005355\|Ga0070671_100736576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	856	Open in IMG/M
3300005436\|Ga0070713_100180632	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1896	Open in IMG/M
3300005544\|Ga0070686_100727436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	794	Open in IMG/M
3300005615\|Ga0070702_100100991	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1769	Open in IMG/M
3300005764\|Ga0066903_100879485	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1618	Open in IMG/M
3300005764\|Ga0066903_101324898	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1347	Open in IMG/M
3300005764\|Ga0066903_101656961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1216	Open in IMG/M
3300005764\|Ga0066903_104077889	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	783	Open in IMG/M
3300005842\|Ga0068858_102539074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	506	Open in IMG/M
3300006041\|Ga0075023_100423233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	582	Open in IMG/M
3300006050\|Ga0075028_100216477	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1040	Open in IMG/M
3300006172\|Ga0075018_10150513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1073	Open in IMG/M
3300006176\|Ga0070765_102014726	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	540	Open in IMG/M
3300006604\|Ga0074060_11650888	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1205	Open in IMG/M
3300006914\|Ga0075436_100973704	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	636	Open in IMG/M
3300007076\|Ga0075435_100890939	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	776	Open in IMG/M
3300009012\|Ga0066710_104286348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	533	Open in IMG/M
3300009101\|Ga0105247_11383730	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	569	Open in IMG/M
3300009162\|Ga0075423_12615739	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	552	Open in IMG/M
3300009792\|Ga0126374_10808360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	717	Open in IMG/M
3300010043\|Ga0126380_11984831	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	532	Open in IMG/M
3300010339\|Ga0074046_10120280	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1686	Open in IMG/M
3300010358\|Ga0126370_12220237	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	541	Open in IMG/M
3300010396\|Ga0134126_11241803	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	827	Open in IMG/M
3300010397\|Ga0134124_10406986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1296	Open in IMG/M
3300010398\|Ga0126383_12589716	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	591	Open in IMG/M
3300011270\|Ga0137391_10743842	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	812	Open in IMG/M
3300012205\|Ga0137362_10333421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1313	Open in IMG/M
3300012211\|Ga0137377_11185622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	693	Open in IMG/M
3300012349\|Ga0137387_11095978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	567	Open in IMG/M
3300012359\|Ga0137385_11416207	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	558	Open in IMG/M
3300012362\|Ga0137361_10238725	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1654	Open in IMG/M
3300012911\|Ga0157301_10047873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1090	Open in IMG/M
3300012930\|Ga0137407_10722086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	939	Open in IMG/M
3300012958\|Ga0164299_10967187	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	624	Open in IMG/M
3300012989\|Ga0164305_10895958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	745	Open in IMG/M
3300014325\|Ga0163163_10588206	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1176	Open in IMG/M
3300015371\|Ga0132258_10233964	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4479	Open in IMG/M
3300015371\|Ga0132258_10360942	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3596	Open in IMG/M
3300015373\|Ga0132257_101706935	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	807	Open in IMG/M
3300015374\|Ga0132255_101820377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	925	Open in IMG/M
3300015374\|Ga0132255_103820629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	640	Open in IMG/M
3300016270\|Ga0182036_10204478	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1450	Open in IMG/M
3300016270\|Ga0182036_10721802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	807	Open in IMG/M
3300016294\|Ga0182041_10244558	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1457	Open in IMG/M
3300016294\|Ga0182041_10751800	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	868	Open in IMG/M
3300016319\|Ga0182033_10263958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1405	Open in IMG/M
3300016319\|Ga0182033_10679698	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	900	Open in IMG/M
3300016341\|Ga0182035_10049981	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2832	Open in IMG/M
3300016357\|Ga0182032_10280617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1307	Open in IMG/M
3300016357\|Ga0182032_11735936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	545	Open in IMG/M
3300016371\|Ga0182034_10318330	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1253	Open in IMG/M
3300016371\|Ga0182034_11171790	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	668	Open in IMG/M
3300016422\|Ga0182039_10130085	All Organisms → cellular organisms → Bacteria	1915	Open in IMG/M
3300016422\|Ga0182039_11665601	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	583	Open in IMG/M
3300016445\|Ga0182038_11328095	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	643	Open in IMG/M
3300016445\|Ga0182038_11733839	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	563	Open in IMG/M
3300017974\|Ga0187777_10724320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	707	Open in IMG/M
3300019361\|Ga0173482_10116545	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	994	Open in IMG/M
3300020579\|Ga0210407_10531685	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	918	Open in IMG/M
3300020580\|Ga0210403_10492769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	996	Open in IMG/M
3300021178\|Ga0210408_10214049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1533	Open in IMG/M
3300025918\|Ga0207662_10435493	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	894	Open in IMG/M
3300025928\|Ga0207700_10544101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1030	Open in IMG/M
3300026035\|Ga0207703_12326725	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	511	Open in IMG/M
3300026078\|Ga0207702_10261471	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1630	Open in IMG/M
3300027039\|Ga0207855_1002430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3007	Open in IMG/M
3300027330\|Ga0207777_1045399	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	784	Open in IMG/M
3300027516\|Ga0207761_1122147	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	507	Open in IMG/M
3300027603\|Ga0209331_1003387	All Organisms → cellular organisms → Bacteria	4622	Open in IMG/M
3300027603\|Ga0209331_1097119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	721	Open in IMG/M
3300027610\|Ga0209528_1005195	All Organisms → cellular organisms → Bacteria	2765	Open in IMG/M
3300027651\|Ga0209217_1070817	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1024	Open in IMG/M
3300027680\|Ga0207826_1033508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1426	Open in IMG/M
3300027703\|Ga0207862_1060499	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1140	Open in IMG/M
3300027703\|Ga0207862_1253924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	515	Open in IMG/M
3300027812\|Ga0209656_10127691	All Organisms → cellular organisms → Bacteria → Proteobacteria	1301	Open in IMG/M
3300027824\|Ga0209040_10083552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1840	Open in IMG/M
3300027910\|Ga0209583_10197785	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	856	Open in IMG/M
3300028047\|Ga0209526_10639671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	677	Open in IMG/M
3300031231\|Ga0170824_124461906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1440	Open in IMG/M
3300031546\|Ga0318538_10451528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	696	Open in IMG/M
3300031573\|Ga0310915_10047224	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2766	Open in IMG/M
3300031680\|Ga0318574_10560182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	670	Open in IMG/M
3300031681\|Ga0318572_10808625	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	557	Open in IMG/M
3300031719\|Ga0306917_10546027	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	911	Open in IMG/M
3300031719\|Ga0306917_10800741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	739	Open in IMG/M
3300031744\|Ga0306918_11380813	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	540	Open in IMG/M
3300031781\|Ga0318547_10850071	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	569	Open in IMG/M
3300031845\|Ga0318511_10413387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	619	Open in IMG/M
3300031890\|Ga0306925_10274994	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1814	Open in IMG/M
3300031890\|Ga0306925_11112456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	798	Open in IMG/M
3300031910\|Ga0306923_10453388	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1455	Open in IMG/M
3300031912\|Ga0306921_11484358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	742	Open in IMG/M
3300031912\|Ga0306921_11825306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	653	Open in IMG/M
3300031941\|Ga0310912_10437659	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1019	Open in IMG/M
3300031942\|Ga0310916_10533679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	999	Open in IMG/M
3300031942\|Ga0310916_11365748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	581	Open in IMG/M
3300031947\|Ga0310909_10037726	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3633	Open in IMG/M
3300032025\|Ga0318507_10469660	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	548	Open in IMG/M
3300032035\|Ga0310911_10181158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1194	Open in IMG/M
3300032059\|Ga0318533_10189438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1469	Open in IMG/M
3300032065\|Ga0318513_10682806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	503	Open in IMG/M
3300032076\|Ga0306924_11511038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	712	Open in IMG/M
3300032076\|Ga0306924_11711419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	659	Open in IMG/M
3300032091\|Ga0318577_10312344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	752	Open in IMG/M
3300032261\|Ga0306920_100782432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1402	Open in IMG/M
3300032261\|Ga0306920_100813035	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1371	Open in IMG/M
3300032261\|Ga0306920_101177375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1108	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.15%
Host-Associated	Host-Associated	10.85%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.50%
Plants	Host-Associated → Plants	10.85%
Aquatic	Environmental → Aquatic	4.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.50%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.20%
Sediment	Environmental → Aquatic → Sediment	3.10%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.88%
Freshwater	Environmental → Aquatic → Freshwater	1.55%
Roots	Host-Associated → Plants → Roots	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.91%
Loam	Environmental → Terrestrial → Soil → Loam	24.03%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.10%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.10%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.88%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.33%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.55%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.55%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.78%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.78%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	36.43%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	20.16%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.95%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.43%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.10%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.10%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.10%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.33%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.55%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.55%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.95%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	10.08%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	9.30%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.65%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.10%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.10%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.33%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.33%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.55%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.55%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.55%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.78%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.78%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.78%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001081	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3	Environmental	Open in IMG/M
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006604	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027039	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 14 (SPAdes)	Environmental	Open in IMG/M
3300027330	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 35 (SPAdes)	Environmental	Open in IMG/M
3300027516	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 34 (SPAdes)	Environmental	Open in IMG/M
3300027603	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1002480112	3300000364	Soil	VASKLTILSPIVLLLLISPIPASELTYKEYAKASEPWKRGFVFGIGRYMSVVAQPDEEPPYPVRTAFQKCLGDSTDSALVRHVEAYVTANPGASNGPMVAVVMRALFDFCRAEISGLAPPR*
INPhiseqgaiiFebDRAFT_1017897544	3300000364	Soil	MISKLKILATFIAPLLATPVLATDFTYKEYAKASETWKRGFVSGISRYMSAVAQPDEEPPYPVRTGFKRCLGSLTDSHLFQHVEAYVATNPGSSNGPMTTVVMRALFDLCRAEISKIKPFGPTHTQKVN*
INPhiseqgaiiFebDRAFT_1039466401	3300000364	Soil	MAPKLTILSTMILLLLVSPILATELTYKEYTKASDLWKRGFVFGIARYMSTVAQPDEEPPYPVRTAFERCLGNSTDSVLVHHVDAYVTANPGASSGPMVAVVMRALFDFCRAEISKLNPPSARPKVH*
JGI1027J11758_125289121	3300000789	Soil	FTYKEYAKASETWKRGFVSGISRYMSAVAQPDEEPPYPVRTGFKRCLGSLTDSHLFQHVEAYVATNPGSSNGPMTTVVMRALFDLCRAEISKIKPFGPTHTQKVN*
JGI1027J12803_1012698902	3300000955	Soil	THPQCPTSRGRLFYSAAWLHITKCSRRFSEYLMISKLKILATFIAPLLATPVLATDFTYKEYAKASETWKRGFVSGISRYMSAVAQPDEEPPYPVRTGFKRCLGSLTDSHLFQHVEAYVATNPGSSNGPMTTVVMRALFDLCRAEIS
JGI10216J12902_1212226831	3300000956	Soil	LTKRQRLFGKVMRPKAKILFPAILTLLISPVLGADFTYKEYAKAPDAWKRGFLFGMSQYMSSVAQPDEEPPYPVRTAFKRCLGPAADSTLVRHVDAYVAAHPEGSNGPVIPVIMRALFDFCRVEISKIKPEQLPAPR*
JGI12662J13196_10204171	3300001081	Forest Soil	LERSSAAQQLPYPGSSLRRFVDTVRTVFMASKLKMIFPVIVPLLVSPTQGAELTYKEFSKASETWKRGFVFGISRYMSTVAQPDEEPPYPVRAAFQRCLGDSTDIVLVRHVEAYVTTNPSASHGPMITVVMRALFDLCRAEISKIKPVAPSQR*
JGI12630J15595_100176392	3300001545	Forest Soil	MASKLKILSSIIVLLLVSPTLGTELTYKEYAKASEIWKRGFVFGISRYMSAVAQPDEEPPYPVRTAFQRCLGDSTDSVLVRQVEAYVAAHPGGSNGPMTAVVVRALFDLCLFDLCRTEISKIKPPTPVPSQR*
JGIcombinedJ26739_1000361165	3300002245	Forest Soil	MLERSSAAQQLPYPGSSLRRFVDTVRTVFMASKLKMIFPVIVPLLVSPTQGAELTYKEFSKASETWKRGFVFGISRYMSTVAQPDEEPPYPVRAAFQRCLGDSTDIVLVRHVEAYVTTNPSASHGPMITVVMRALFDLCRAEISKIKPVAPSQR*
JGIcombinedJ26739_1003327221	3300002245	Forest Soil	MASKLKILSSIIVLLLVSPTLGTELTYKEYAKASEIWKRGFVFGISRYMSAVAQPDEEPPYPVRTAFQRCLGDSTDSVLVRQVEAYVAAHPGGSNGPMTAVVVRALFDLCRTEISKIKPPTPVPSQR*
JGIcombinedJ26739_1012425641	3300002245	Forest Soil	SLRRFVDTFRTVLMASKLKIIFPMIVPLLVSPTLGTELTYKEFSKASEAWKRGFVFGISRYMAAVAQPDEEPPYPVRAAFQKCLGDLTDSILERHVETYVAAHPSGSNGPMTAVVVRALFDLCRAEISKIKPLAPIPSQR*
JGIcombinedJ51221_101991053	3300003505	Forest Soil	TSKLQILLPIIVPLLVSPTLAADLTYKEYAKASDIWKRGFVFGISRYMAAVAQPDEEPPYPVRTAFQRCLGNSTDSVLVQQVEGYVKAHPDHSNGPMTTVVVRALFDLCRAEISKIRAPTPMPGQR*
JGIcombinedJ51221_103243241	3300003505	Forest Soil	VLTSQLLSYFPGVFMASKLKILSSIIVLLLVSPTLGTELTYKEYAKASEIWKRGFVFGISRYMSAVAQPDEEPPYPVRTAFQRCLGDSTDGVLVRQVEAYVAAHPGGSNGPMTAVVVRALFDLCRTEISKIKPPTPVPSQR*
Ga0062590_1003309651	3300004157	Soil	MRPKAKILFPAILTLLISPVLGADFTYKEYAKAPDAWKRGFLFGMSQYMSSVAQPDEEPPYPVRTAFKRCLGPAADSTLVRHVDAYVAAHPEGSNGPVIPVIMRALFDFCRVEISKIKPEQLPAPR*
Ga0062595_1001116911	3300004479	Soil	MRPKAKILFPAILTLLISPVLGADFTYKEYAKAPDAWKRGFLFGMSQYMSSVARPDEEPPYPVRTAFKRCLGPAADSTLVRHVDAYVAAHPEGSNGPVIPVIMRALFDFCRVEISKIKPEQLPAPR*
Ga0062591_1002007721	3300004643	Soil	MRPKAKILFPAILTLLISPVLGADFTYKEYAKAPDAWKRGFLFGMSQYMSSVAQPDEEPPYPVRTAFKRCLGPAADSTLVRHVDAYVAAHPEGSNGPVIPVIMRALFDFCRVEISKIKPDQLPAPR*
Ga0062594_1003133851	3300005093	Soil	MRPKAKILFPAILTLLISPVLGADFTYKEYAKAPDAWKRGFLFGMSQYMSSVARPDEEPPYPVRTAFKRCLGPAADSTLVRHVDAYVAAHPEGSNGPVIPVIMRALFDFCRVEISKIKP
Ga0066388_1030702331	3300005332	Tropical Forest Soil	MSKPKILATFIASLLVTPVLATDFTYKEYAKASETWKRGFVSGISRYMSAVAQPDEEPPYPVRTGFKRCLGSLTDNHLVQHVAAYVATNPGSSNGPMTAVVVRALFDLCRAEISKINGPTHTQKVN*
Ga0066388_1037934761	3300005332	Tropical Forest Soil	MASKLKFFTPIVVALLVNPTVATELTYKEYAKASDIWKRGFVFGISQYVSAVAQPDEEPPYPVRTAFQKCLGAAVDSVLVQRVEAYVKAHPANSNGPMTAVVMRALFDFCRVEISKIRPPVPSQR*
Ga0066388_1061278401	3300005332	Tropical Forest Soil	YFARSFRVPDGFMASRLKFLSPIIVPLLVSPTLATEFTYKEYAKESDNWKRGFVFGISRYVSSVAQPDEEPPYPLRAAFQRCLASSTDGTLVRHVEAYVTANPSASHGPMITIVMRAMFDLCRGEISKIRAPTPLPSQR*
Ga0070671_1007365762	3300005355	Switchgrass Rhizosphere	MRPKAKILFPAILTLLISPVLGADFTYKEYAKAPDAWKRGFLFGMSQYMSSVARPDEEPPYPVRTAFKRCLGPAADSTLVRHVDAYVAAHPEGSNGPVIPVIMRALFDFCRVEISKIK
Ga0070713_1001806323	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MRPKAKILFPAILTLLISPVLGADFTYKEYAKAPDAWKRGFLFGMSQYMSSVARPDEEPPYPVRTAFKRCLGPAADSTLVRHVDAYVAAHPEGSNGPVIPVIMRALFDFCRVEISKIKPDQLPAPR*
Ga0070686_1007274362	3300005544	Switchgrass Rhizosphere	MRPKAKILFPAILTLLISPVLGADFTYKEYAKAPDAWKRGFLFGISQYMSAVAQPDEEPPYPVRTAFKRCLGPAADSTLVRHVDTYVAAHPEGSNGPVIPVIMRALFDFCRVEISKIKPDQLPAPR*
Ga0070702_1001009911	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	RARKIRSLQSKILSAGISADLTKRQRLFGKVMRPKAKILFPAILTLLISPVLGADFTYKEYAKAPDAWKRGFLFGMSQYMSSVARPDEEPPYPVRTAFKRCLGPAADSTLVRHVDAYVAAHPEGSNGPVIPVIMRALFDFCRVEISKIKPDQLPAPR*
Ga0066903_1008794852	3300005764	Tropical Forest Soil	MASNLKLLTPIIVPLLINPVMGTELTYKEYAKASEVWKRGFVFGISRYMSAVAQPDEEPPYPVRTAFQRCLGDSADTVLVQHVEAYVKAHPAGSSGPMTAVVVRALFDFCRIELSRIRPPVPSQR*
Ga0066903_1013248982	3300005764	Tropical Forest Soil	MASRSKILLAIIVTLFVSPTLAAEFTYKEYAKASENWKRGFVSGISRYMTTVAQPDEEPPFPVRTAFQRCLGNATDDLLVRQVEGYVKAHPDNSNGPMTSVVVRALFDLCRAEISKIRAPTPKPGQR*
Ga0066903_1016569611	3300005764	Tropical Forest Soil	RSQSPGAFMTAKLKILSSMIVLLLVSPALATEFTYKEYVKASEVWKRGFVFGISRYMATVAQPDEEPPYPVRAAFQRCLGDSTDIVLVRHVEAYVAANPSASHGPMITVVMRALFDLCRAEVSKTRPSAPIQNQR*
Ga0066903_1040778892	3300005764	Tropical Forest Soil	MRTVLSSGARSNTSIALKLSILSSMLVLVPVRPTLGADFNYREYAKASEAWRRGFVFGISQYVSAVAQPDEEPPYPVRTAFKRCLGASTDSVLVRHVDKYVAANPGGSNGPMTAVIMRALFDFCRAEISRATPSPTHR*
Ga0068858_1025390741	3300005842	Switchgrass Rhizosphere	LTKRQRLFGKVMRPKAKILFPAILTLLISPVLGADFTYKEYAKAPDAWKRGFLFGMSQYMSSVARPDEEPPYPVRTAFKRCLGPAADSTLVRHVDAYVAAHPEGSNGPVIPVIMRALFDFCRVEISKIKPDQLPAPR*
Ga0075023_1004232331	3300006041	Watersheds	MTSKLQIFLPIIVPLLVSPTLAADLTYKEYAKASDIWKRGFVFGISRYMAAVAQPDEEPPYPVRTAFQRCLGNSTDSVLVQQVEGYVKAHPDHSNGPMTTVVVRALFDLCRAEISKI
Ga0075028_1002164772	3300006050	Watersheds	MTSKLQIFLPIIVPLLVSPTLAADLTYKEYAKASDIWKRGFVFGISRYMAAVAQPDEEPPYPVRTAFQRCLGNSTDSVLVQQVEGYVKAHPDHSNGPMTTVVVRALFDLCRAEISKIRAPTPMPGQR*
Ga0075018_101505131	3300006172	Watersheds	MASKLKILSSIIVLLLVSPTLGTELTYKEYAKASEVWKRGFVFGISRYMSAVAQPDEEPPYPVRTAFQRCLGDSTDGVLVRQVEAYVAAHPGGSNGPMTAVVVRALFDLCRAEISKIKPPTPIPSQR*
Ga0070765_1020147261	3300006176	Soil	MASKLKILSSIIVLLLVSPTLGTELTYKEYAKASEVWKRGFVFGISRYMSAVAQPDEEPPYPVRTAFQRCLGDSTDGVLVRQVEAYVAAHPGGSNGPMTAVVV
Ga0074060_116508881	3300006604	Soil	SLFSGSSTSRPPLTAFTVILPIWKRGFVFGISRYMAAVAQPDEEPPYPVRTAFQRCLGNSTDSVLVQQVEGYVKAHPDHSNGPMTTVVVRALFDLCRAEISKIRAPTPMPGQR*
Ga0075436_1009737041	3300006914	Populus Rhizosphere	ISADLTKRQRLFGKVMRPKAKILFPAILTLLISPVLGADFTYKEYAKAPDAWKRGFLFGMSQYMSSVARPDEEPPYPVRTAFKRCLGPAADSTLVRHVDAYVAAHPEGSNGPVIPVIMRALFDFCRVEISKIKPDQLPAPR*
Ga0075435_1008909392	3300007076	Populus Rhizosphere	TFRSVARPGRARKIRSLQSKILSAGISADLTKRQRLFGKVMRPKAKILFPAILTLLISPVLGADFTYKEYAKAPDAWKRGFLFGMSQYMSSVARPDEEPPYPVRTAFKRCLGPAADSTLVRHVDAYVAAHPEGSNGPVIPVIMRALFDFCRVEISKIKPEQLPAPR*
Ga0066710_1042863482	3300009012	Grasslands Soil	SPTLGTELTYKEYVKASEIWKRGFVFGISRYMSAVAQPDEEPPYPVRTAFQRCLGDSTDSVLVRHVEAYVAAHPGGSNGTMTAVVVRALFDLCRAEISKIKPPTPIPSRR
Ga0105247_113837302	3300009101	Switchgrass Rhizosphere	MRPKAKILFPTILALLIGSAMAADFTYKEYAKAPDAWKRGFLFGISQYMSAVAQPDEEPPYPVRTAFKRCLGPATDSMIIRHVDVYVAAHPEGSNGPVIPVIMRALFDFCRVEISKLKPDQLPGPR*
Ga0075423_126157391	3300009162	Populus Rhizosphere	KIRSLQSKILSAGISADLTKRQRLFGKVMRPKTKILFPAILTLLISPVLGADFTYKEYAKAPDAWKRGFLFGMSQYMSSVARPDEEPPYPVRTAFKRCLGPAADSTLVRHVDAYVAAHPEGSNGPVIPVIMRALFDFCRVEISKIKPEQLPAKR*
Ga0126374_108083601	3300009792	Tropical Forest Soil	SIALKLSILSSMLVLLLVRPILGADFNYREYAKASEAWRRGFVFGISQYVSAVAQPDEEPPYPVRTAFKRCLGASTDSVLVRHVDKYVAANPGSSNGPMTAVIMRALFDFCRTEISRATPSPTHR*
Ga0126380_119848311	3300010043	Tropical Forest Soil	MMSKVKLLSPIVLLLLVSPILATDFTYKEYAKSPEAWRRGFISGISRYMTAVAQPDEEPPYPVRTAFQRCLGAATESSLVQHVEAYVAANPASSNGPMTAVVMRALFDLCKTEISKIRPPAPAAPSQR
Ga0074046_101202802	3300010339	Bog Forest Soil	MASKLKFLSPIIVPLLVSPTLGTELTYKEYAKASEIWKRGFVFGISRYMSAVAQPDEEPPYPVRTAFQTCLRDSTDSVLVRHVEAYVAAHPGGSNGPMTAVVVRALFDLCRAEISKIKPPIPSQR*
Ga0126370_122202371	3300010358	Tropical Forest Soil	MISKVKLLSPIVVLLLVSPILATDFTYKEYAKSPESWRRGFIFGISRYMTAVAQPDEEPPYPVRTAFQRCLGAATESALVQHVEAYVAANSASSNGPMTAVVMRALFDLCKAEISKIRPPTPAAPSQR*
Ga0134126_112418031	3300010396	Terrestrial Soil	MRPKAKILFPAILTLLISPVLGADFTYKEYAKAPDAWKRGFLFGMSQYMSSVARPDEEPPYPVRTAFKRCLGPAADSTLVRQVDAYVAAHPEGSNGPVIPVIMRALFDFCRVEISKIKPDQLPAPR*
Ga0134124_104069861	3300010397	Terrestrial Soil	MRPKAKILFPAILTLLISPVLGADFTYKEYAKAPDAWKRGFLFGMSQYMSSVARPDEEPPYPVRTAFKRCLGPAADSTLVRHVDAYVAAHPEGSNGPVIPVIMRALFDFCRVEISKLKPDQLPGPR*
Ga0126383_125897161	3300010398	Tropical Forest Soil	MTAKLKILSPIIVLLLVSPALATEFTYKEYVKASEVWKRGFVFGISRYMATVAQPDEEPPYPVRAAFQRCLGDSTDGVLVRHVEAYVAANPNASHGPMITVVMRALFDLCRADVSKTRPSTPIQR*
Ga0137391_107438422	3300011270	Vadose Zone Soil	MASKLKLLSLIIVPLLVSPTLGTELTYKEYVKASEIWKRGFVFGISRYMSAVAQPDEEPPYPVRTAFQRCLGDSTDSVLVRHVEAYVAAHPGGSNGPMTAVVVRALFDLCRAEISKIKPPTPIPSRR*
Ga0137362_103334211	3300012205	Vadose Zone Soil	MASKLKLLSLIIVPLLVSPTLGTELTYKEYVKASEIWKRGFVFGISRYMSAVAQPDEEPPYPVRTAFQRCLGDSTDSVLVRHVEAYVAAHPGGSNGPMTAVVVRALFD
Ga0137377_111856222	3300012211	Vadose Zone Soil	MASKLKLLSPIIVPLLVSPTLGTELTYKEYVKASEIWKRGFVFGISRYMSAVAQPDEEPPYPVRTAFQRCLGDSTDSVLVRHVEAYVAAHPGGSNGPMTAVVVRALFDLCRAEISKSLSGNIRR
Ga0137387_110959781	3300012349	Vadose Zone Soil	LAGLHDWQAGGGVLAITHILLPPNNCPIRVLTSEVRSYFPGVFMASKLKLFSLIIVPLLVSPTLGTELTYKEYAKASEIWKRGFVFGISRYMSAVAQPDEEPPYPVRTAFQRCLGDSTDSVLVRHVEAYVAAHPGGSNGTMTAVVVRALFDLCRAEISKIKPPTPIPSQR*
Ga0137385_114162072	3300012359	Vadose Zone Soil	MASKLKLLSPIIVPLLVSPTLGTELTYKEYAKASEIWKRGFVFGISRYMSAVAQPDEEPPYPVRTAFQRCLGDSTDSVLVRHVEAYVAAHPGGSNGPMTAVVVRALFDLCRAEISKIKPPTPIPSQR*
Ga0137361_102387252	3300012362	Vadose Zone Soil	MASKLKLLSLIIVPLLVSPTLGTELTYKEYVKASEIWKRGFVFGISRYMSAVAQPDEEPPYPVRTAFQRCLGDSTDSVLVRHVEAYVAAHPGGSNGTMTAVVVRALFDLCRAEIS
Ga0157301_100478732	3300012911	Soil	MRPKAKILFPAILTLLISPVLGAEFTYKEYAKAPDPWKRGFLFGISQYMSAVAQPDEEPPYPVRTAFKRCLGPAADSTLVRHVDTYVAAHPEGSNGPVIPVIMRALFDFCRVEISKIKPEQLRAPR*
Ga0137407_107220862	3300012930	Vadose Zone Soil	MVSKQTILSPIIVPLLVSPILATEFTYKEYANASEIWRRGFVFRISRYMSAVAQPDEEPPYPVRTAFQRCLDGSTDSLLVRHVEAYVRANPGGSNGPMTAVVMRALFDFCRAEISKVKPATTAPSRR*
Ga0164299_109671871	3300012958	Soil	MTSKLQIFLPIIVPLLVSPTLAADLTYKEYAKASDIWKRGFVFGISRYMAAVAQPDEEPPYPVRTAFQRCLGNSTDSVLVQQVEGYVKAHPDHSNGPMTTVVVRALFDLCRAEISKIKAPTPMPGQR*
Ga0164305_108959582	3300012989	Soil	SERICSRLVKLKFCRRPTIALSGLYFASSFIASGVFMTSKLQIFLPIIVPLLVSPTLAAELTHKECAKASEIWKRGFVFGISRYIAAVAQTDEEPPYPVRTAFQRCIGNSTDSVLVQQVEGYVKAHPDHSNGPMTTVVVRALFDLCRAEISKIRAPTPMPGQR*
Ga0163163_105882061	3300014325	Switchgrass Rhizosphere	MRPKAKILFPAILTLLISPVLGADFTYKEYAKAPDAWKRGFLFGISQYMSAVAQPDEEPPYPVRTAFKRCLGPAADSTLVRHVDAYVAAHPEGSNGPVIPVIMRALFDFCRVEISKIKPDQLPAPR*
Ga0132258_102339643	3300015371	Arabidopsis Rhizosphere	MGLKPAILSVLIVPLLASPILAAEFTYKDNPKASEMWRRGYVFGISKYMAAVAQPDEEPPYPVKTAFQRCLDGSTDSVLLRHVEAYVKANPSGSNGPMTGVVMRALFDLCRAEISKVTRTDSPPRRR*
Ga0132258_103609421	3300015371	Arabidopsis Rhizosphere	MRTKAKILFPTVLALLVSSAMAGDFTYKEYAKAPDAWKRGFLFGMSQYMSAVAQPDEEPPYPVRTAFKRCLGPATDSTLVRHVDAYVAAHPEGSNGPVIPVILRALFDFCRVEMSKLKPEQLPGAR*
Ga0132257_1017069351	3300015373	Arabidopsis Rhizosphere	MRPKAKILFPAILTLLISPVLGADFTYKEYAKAPDAWKRGFLFGMSQYMSSVARPDEEPPYPVRTAFKRCLGPAADSTLVRHVDTYVAAHPEGSNGPVIPVIMRALFDFCRVEISKIKPEQLRAPR*
Ga0132255_1018203771	3300015374	Arabidopsis Rhizosphere	TKRQRLFGKVMRPKAKILFPAILTLLISPVLGAEFTYKEYAKAPDPWKRGFLFGISQYMSAVAQPDEEPPYPVRTAFKRCLGPATDSTLVRHVDAYVAAHPEGSNGPVIPVILRALFDFCRVEMSKLKPEQLPGAR*
Ga0132255_1038206292	3300015374	Arabidopsis Rhizosphere	MISKLKFLFPTIVLLLVSPLLASEFTYKEYAKSPEAWKRGFVYGIAEYMSAVAQPDEEPPYPVRTAFHRCLGASSDSVLARHVDSYVTANPGGSSGPMTAVVMRALFDFCRVEISKVKPAAAAPTQQ*
Ga0182036_102044782	3300016270	Soil	MALSPRILFPIFVLLLVSPTLATELTYKEYAKASEPWKRGFVFGISRYMSAVAQPDEEPPYPVRTAFQRCLGDSTDAVLVQHIESYVKAHPGSSNGPMTAVVMRALFDLCRAEISKTSRPTQVPSRR
Ga0182036_107218021	3300016270	Soil	MTAKLKILSAMIVLLLVSPALATEFSYKEYVKASEVWKRGFVFGISRYMATVAQPDEEPPYPVRAAFQKCLGDSTDSVLVRHVEAYVAANPSASHGPMITVVMRALFDLCRAEVSKTRPSTTIQNQR
Ga0182041_102445581	3300016294	Soil	MTAKLKILTPIIVLLLVSPALATEFTYKEYVKASEVWKRGFVFGISRYMATVAQPDEEPPYPVRAAFQRCLGDSTDSVLVRHVEAYVAANPSASHGPMITVVMRALFDLCRAEVSKTRPSTPIQKQR
Ga0182041_107518001	3300016294	Soil	MASRLKILFTFIVLLLGSPTLATEFTYKEYAKAPEAWKRGFVFGVSRYISTVAQPDEEPPYPVRSAFQRCLGDSTDGVLVRHVETYVAANPSASHGSMITVVMRALFDLCRAEISKIRPPTPQVR
Ga0182033_102639581	3300016319	Soil	MASKLKFFTPIVVALLVNPTVATELTYKEYAKASDIWKRGFVFGISQYVSAVAQPDEEPPYPVRTAFQKCLGAAVDSVLVERVEAYVKAHPANSNGPMTAVVMRALFDFCRVEISKIRPPVPSQR
Ga0182033_106796981	3300016319	Soil	MTAKLKILSAMIVLLLVSPALATEFTYKEYVKASEVWKRGFVFGISRYMVTVAQPDEEPPYPVRAAFQRCLGDSTDSVLVHHVEAYVAANPSASHGPMITVVMRALFDLCRAEVSKTRPSTPIQNQR
Ga0182035_100499813	3300016341	Soil	MASKLKFFTPIVVALLVNPTVATELTYKEYAKASDVWKRGFVFGISQYVSAVAQPDEEPPYPVRTAFQKCLGAAVDSVLVQRVEAYVKAHPANSNGPMTAVVMRALFDFCRVEISKIRPPVPGQR
Ga0182032_102806171	3300016357	Soil	MASRLKILFPFIVLLLGSPTLATEFTYKEYAKASEAWKRGFVFGVSRYISTVAQPDEEPPYPVRSAFQRCLGDSTDSVLVRHVETYVAANPSASHGSMITVVMRA
Ga0182032_117359361	3300016357	Soil	AFEGPPSITQNIGRRLRGAGGWSHGEILACKIAVIAVPLLVSPTMGTEFTYKEYAKASEAWKRGFVFGISRYMSAVAQPDEEPPYPVRTAFQICLGTSTDSALAQHVEAYVKAHPASSGGPMTAVVVRALFDLCRAEISKIRPPIPNQR
Ga0182034_103183302	3300016371	Soil	MASRLKILFTFIVLLLGSPTLATEFTYKEYAKAPEAWKRGFVFGVSRYISTVAQPDEEPPYPVRSAFQRCLGDSTDTVLVRHVETYVAANPSASHGPMITVVMRALFDLCRAEISNKIRPSTPQVR
Ga0182034_111717901	3300016371	Soil	VFMASRLKFLAPIIVPLLVGPTLATEFTYKEYAKASEAWKRGFVFGISRYISTVAQPDEEPPYPVRAAFQRCLADSADSTLVRHVEAYVPTNPSASHGPMITVVMRALFDLCRVEIS
Ga0182039_101300851	3300016422	Soil	MASKLKFFTPIVVALLVNPTVATELTYKEYAKASDIWKRGFVFGISQYVSAVAQPDEEPPYPVRTAFQKCLGAAVDSVLVQRVEAYVKAHPANSNGPMTAV
Ga0182039_116656012	3300016422	Soil	MTASKLTVVSAIIALLLVSPILATDFTYKEYAKASEVWRRGFVFGISQYMSAVAQPDEEPPYPVRAAFQRCLSTSTDSVLVRHVETYVAANPSKSNGPMTAVVMRALF
Ga0182038_113280952	3300016445	Soil	ILSSMLVLVLARPILGADFNYREYAKASESWRRGFVFGISQYVSAVAQPDEEPPYPVRTVFKRCLGASTDSILVRHVDKYVAANPGGSNGPMTAVIMRALFDFCRAEISRATPSPTYR
Ga0182038_117338391	3300016445	Soil	LQQVKWPSVFMASKLKILLVIAVSFLVSPTMGTEFTYKEYAKASEVWKRGFVFGISRYMSAVAQPDEEPPYPVRTAFQICLGNSADSVLAQHVEAYVKAHPASSSGPMAAVVVRALFDLCRAEISKIRPPIPNQR
Ga0187777_107243202	3300017974	Tropical Peatland	MTACKLTVVSAIIAPLLVSPILATDFTYKEYAKASEVWKRGFIFGISRYMSAVAQPDEEPPYPVRTAFQICLGNAADSSLLQTVEAYVKAHPAGSNGPMTAVVVRALFDLCRAEISKIRPPIPSQR
Ga0173482_101165452	3300019361	Soil	MRPKAKILFPAILTLLISPVLGAEFTYKEYAKAPDAWKRGFLFGMSQYMSSVAQPDEEPPYPVRTAFKRCLGPAADSTLVRHVDAYVAAHPEGSNGPVIPVIMRALFDFCRVEISKIKPEQLPAPR
Ga0210407_105316852	3300020579	Soil	MASKLKILSSIIVLLLVSPTLGTELTYKEYAKASEVWKRGFVFGISRYMSAVAQPDEEPPYPVRTAFQRCLGDSTDGVLVRQVEAYVAAHPGGSNGPMTAVVVRALFDLCRTEISKIKPPTPVPSQR
Ga0210403_104927692	3300020580	Soil	MTSKLQILLPIIVPLLVSPTLAADLTYKEYAKASDIWKRGFVFGISRYMAAVAQPDEEPPYPVRTAFQRCLGNSTDSVLVQQVEGYVKAHPDHSNGPMTTVVVRALFDLCRAEISKIRAPTPMPGQR
Ga0210408_102140491	3300021178	Soil	MASKLKMIFPVIVPLLVCPTQGAELTYKEFSKASETWKRGFVFGISRYMSTVAQPDEEPPYPVRAAFQRCLGDSTDIVLVRHVEAYVTTNPSASHGPMITVVMRALFDLCRAEISKIKPVAPSQR
Ga0207662_104354932	3300025918	Switchgrass Rhizosphere	MRPKAKILFPAILTLLISPVLGADFTYKEYAKAPDAWKRGFLFGMSQYMSSVARPDEEPPYPVRTAFKRCLGPAADSTLVRHVDAYVAAHPEGSNGPVIPVIMRALFDFCRVE
Ga0207700_105441012	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MRPKAKILFPAILTLLISPVLGADFTYKEYAKAPDAWKRGFLFGMSQYMSSVARPDEEPPYPVRTAFKRCLGPAADSTLVRHVDAYVAAHPEGSNGPVIPVIMRALFDFCRVEISKIKPDQLPAPR
Ga0207703_123267251	3300026035	Switchgrass Rhizosphere	TLLISPVLGADFTYKEYAKAPDAWKRGFLFGMSQYMSSVARPDEEPPYPVRTAFKRCLGPAADSTLVRHVDAYVAAHPEGSNGPVIPVIMRALFDFCRVEISKIKPDQLPAPR
Ga0207702_102614713	3300026078	Corn Rhizosphere	MRPKAKILFPAILTLLISPVLGADFTYKEYAKAPDAWKRGFLFGMSQYMSSVARPDEEPPYPVRTAFKRCLGPAADSTLVRHVDAYVAAHPEGSNGPVIPVIMRALFDFCRVEISKLKPDQLPGPR
Ga0207855_10024305	3300027039	Tropical Forest Soil	MPLLVSPTIGTEFTYKEYAKASEVWKRGFVFGISRYMSAVAQPDEEPPYPVRTAFQICLGNSTDSVLAQHVEAYVKAHPASSSGPMTAVIVRALFDLCRAEISKTPPQKGG
Ga0207777_10453991	3300027330	Tropical Forest Soil	MTSKLKILSAIIVPLFVSPTLATEFTYKEYAKASEVWKRGFVFGIARYMSTVAQPDEEPPYPVRTAFQRCLSASTDGVLVRQVEAYVAANPSASHGPMITVVMRALFDLCRAEISKTPPQKGG
Ga0207761_11221471	3300027516	Tropical Forest Soil	MQARRQNKIARLASHIFIAVALLVSPTMGTEFTYKEYAKASEVWKRGFVFGISRYMSAVAQPDEEPPYPVRTAFQICLGNSTDSVLAQYVEAYVKAHPASSSGPMTAVVVRALFDLCRAEISRTRPPIPNQR
Ga0209331_10033872	3300027603	Forest Soil	MASKLKMIFPVIVPLLVSPTQGAELTYKEFSKASETWKRGFVFGISRYMSTVAQPDEEPPYPVRAAFQRCLGDSTDIVLVRHVEAYVTTNPSASHGPMITVVMRALFDLCRAEISKIKPVAPSQR
Ga0209331_10971191	3300027603	Forest Soil	MASKLKILSSIIVLLLVSPTLGTELTYKEYAKASEIWKRGFVFGISRYMSAVAQPDEEPPYPVRTAFQRCLGDSTDSVLVRQVEAYVAAHPGGSNGPMTAVVVRALFDLCRTEISKIKPPTPVPSQR
Ga0209528_10051952	3300027610	Forest Soil	MASKLKMIFPVIVPLLVSPTQGAELTYKEFSKASETWKRGFVFGISRYMSTVAQPDEEPPYPVRTAFQRCLGDSTDSVLVRQVEAYVAAHPGGSNGPMTAVVVRALFDLCRTEISKIKPPTPVPSQR
Ga0209217_10708172	3300027651	Forest Soil	MASKLKIFSSIIVLLLVSPTLGTELTYKEYAKASEIWKRGFVFGISRYMSAVAQPDEEPPYPVRTAFQRCLGDSTDSVLVRQVEAYVAAHPGGSNGPMTAVVVRALFDLCRTEISKIKPPTPVPSQR
Ga0207826_10335083	3300027680	Tropical Forest Soil	IPDPYFASSSIFFPSVFMASKLKILSLIAVPLLVSPAMGTEFTYREYAKLSEIWKRGFVFGISRYMSAVAQPDEEPPYPVRTAFQICLGNSTDSVLAQYVEAYVKAHPASSSGPMTAVIVRALFDLCRAEISKTPPQKGG
Ga0207862_10604992	3300027703	Tropical Forest Soil	MAVKLKALSAIIVPLLVSSTLATEFTYKEYAKASEAWKRGFVFGIARYMSTVAQPDEEPPYPVRTAFQRCLSASTDGVLVRQVEAYVAANPSASHGPMITVVMRALFDLCRAEISKTPPQKGG
Ga0207862_12539241	3300027703	Tropical Forest Soil	DVETPCSADTGSDVHSSTTPNNCPIPDPYFASSSIFFPSVFMASKLKILSLIAVPLLVSPAMGTEFTYREYAKLSEIWKRGFVFGISRYMSAVAQPDEEPPYPVRTAFQRCLGDSTDSVLVRHVETYVAANPSASHGPMITVVMRALFDLCRAEISKTPPQKGG
Ga0209656_101276913	3300027812	Bog Forest Soil	MASKLKFLSPIIVPLLVSPTLGTELTYKEYAKASEIWKRGFVFGISRYMSAVAQPDEEPPYPVRTAFQRCLGDSTDSVLVRHVEAYVAAHPGGSNGPMTAVVVRALFDLCRAEISKTKPPMPMPSQR
Ga0209040_100835523	3300027824	Bog Forest Soil	MASKLKFLSPIIVPLLVSPTLGTELTYKEYAKASEIWKRGFVFGISRYMSAVAQPDEEPPYPVRTAFQRCLGDSTDSVLVRHVEAYVAAHPGGSNGPMTAVVVRALFDLCRAEISKTKPPMPMPSPR
Ga0209583_101977851	3300027910	Watersheds	MTSKLQIFLPIIVPLLVSPTLAADLTYKEYAKASDIWKRGFVFGISRYMAAVAQPDEEPPYPVRTAFQRCLGNSTDSVLVQQVEGYVKAHPDHSNGPMTTVVVRALFDLCR
Ga0209526_106396711	3300028047	Forest Soil	VFMASRPQIFLPIIVPLLVGPTLAAEFTYKEYAKASENWKRGFVFGISRYMTAVAQPDEEPPFPVRMAFQRCLGNSTDSVLVQQAEGYVKAHPDNSNGPMTAVVVRALFDLCRAEISKIRAPTPMPGKR
Ga0170824_1244619061	3300031231	Forest Soil	MALNARVLFPIIVPLLVCPTMATEFTYKDYAKASEPWKRGFVFGISRYMSAVAQPDEEPPYPVRTAFQKCLGDSADTILVQHVESYVKAHPGSSNGAMTAVVMRALFDLCRAEISKIRVRTPIPSQR
Ga0318538_104515281	3300031546	Soil	MTASKLTVVSAIIALLLVSPILATDFTYKEYAKASEVWRRGFVFGISQYMSAVAQPDEEPPYPVRAAFQRCLSTSTDSVLVRHVETYVAANPSKSNGPMTAVVMRALFDFCRVEISKA
Ga0310915_100472243	3300031573	Soil	MASKLKFFTPIVVALLVNPTVATELTYKEYAKASDIWKRGFVFGISQYVSAVAQPDEEPPYPVRTAFQKCLGAAVDSVLVQRVEAYVKAHPANSNGPMTAVVMRALFDFCRVEISKIRPPVPSQR
Ga0318574_105601821	3300031680	Soil	AFMASRLKILFTFIVLLLGSPTLATEFTYKEYAKAPEAWKRGFVFGVSRYISTVAQPDEEPPYPVRSAFQRCLGDSTDTVLVRHVETYVAANPSASHGPMITVVMRALFDLCRADISKIRPPTPQVR
Ga0318572_108086251	3300031681	Soil	MASKLKFFTPIVVALLVNPTVATELTYKEYAKASDIWKRGFVFGISQYVSAVAQPDEEPPYPVRTAFQKCLGAAVDSVLVQRVEAYVKAHPANSNGPMTAVVMRALFDCCRVE
Ga0306917_105460273	3300031719	Soil	SRLKILFPFIVLLLGSPTLATEFTYKEYAKASEAWKRGFVFGVSRYISTVAQPDEEPPYPVRSAFQRCLGDSTDTVLVRHVETYVAANPSASHGPMITVVMRALFDLCRADISKIRPPTPQVR
Ga0306917_108007412	3300031719	Soil	MTASKLTVVSAIIALLLVSPILATDFTYKEYAKASEVWRRGFVFGISQYMSAVAQPDEEPPYPVRAAFQRCLSTSTDSVLVRHVETYVAANPSKSNGPMTAVVMRALFDFCRVEISKATAPGHR
Ga0306918_113808131	3300031744	Soil	VIVPLLVSSTQGAELTYKEFSKASETWKRGFVFGISRYMSTVAQPDEQPPYPVRTAFQRCLSDSTDIVLVRHLEAFVTANPSASHGPMITVVMRALFDLCRAEISKIKPVAPSQR
Ga0318547_108500711	3300031781	Soil	MTASKLTVVSAIIALLLVSPILATDFTYKEYAKASEVWRRGFVFGISQYMSAVAQPDEEPPYPVRAAFQRCLSTSTDSVLVRHVETYVAANPSKSNGPMTAVVMRALFDFC
Ga0318511_104133872	3300031845	Soil	LLLVSPILATDFTYKEYAKASEVWRRGFVFGISQYMSAVAQPDEEPPYPVRAAFQRCLSTSTDSVLVRHVETYVAANPSKSNGPMTAVVMRALFDFCRVEISKATAPGHR
Ga0306925_102749943	3300031890	Soil	MASRLKILFPFIVLLVGSPTLATEFTYKEYAKASEAWKRGFVFGVSRYISTVAQPDEEPPYPVRSAFQRCLGDSTDSVLVRHVETYVAANPSASHGPMITVVMRALFDLCRADISKIRPPTPQVR
Ga0306925_111124561	3300031890	Soil	YMASKLKILPVIAVPFLVSPTMGTEFTYKEYAKASEVWKRGFVFGISRYMATVAQPDEEPPYPVRAAFQRCLGDSTDSVLVHHVEAYVAANPSASHGPMITVVMRALFDLCRAEVSKTRPSTPIQNQR
Ga0306923_104533881	3300031910	Soil	MASRLKILFPFIVLLLGSPTLATEFTYKEYAKASEAWKRGFVFGVSRYISTVAQPDEEPPYPVRSAFQRCLGDSTDSVLVRHVETYVAANPSASHGSMITVVMRALFDLCRAEISKIRPS
Ga0306921_114843582	3300031912	Soil	MALSPRILFPIIVLLLVSSALATELTYKEYTKASEPWKRGFVFGISRYMSAVAQPDEEPPYPVRTAFQRCLGDSTDAVLVQHIESFVKAHPGSSNGSMTAVVMRALFDLCRAEISKIRLPTQVPSRR
Ga0306921_118253062	3300031912	Soil	GSPTLATEFTYKEYAKASDAWKRGFVFGVSRYISTVAQPDEEPPYPVRSAFQRCLGDSTDTVLVRHVETYVAANPSASHGPMITVVMRALFDLCRADISKIRPPTPQVR
Ga0310912_104376591	3300031941	Soil	MALSPRILFPIFVLLLVSPTLATELTYKEYAKASDIWKRGFVFGISQYVSAVAQPDEEPPYPVRTAFQKCLGAAVDSVLVQRVEAYVKAHPANSNGPMTAVVMRALFDFCRVEISKIRPPVPSQR
Ga0310916_105336791	3300031942	Soil	LVSSTQGAELTYKEFSKASETWKRGFVFGISRYMSTVAQPDEQPPYPVRTAFQRCLSDSTDIVLVRHLEAFVTANPSASHGPMITVVMRALFDLCRAEISKIKPVAPSQR
Ga0310916_113657481	3300031942	Soil	LTYKEYTKASEPWKRGFVFGISRYMSAVAQPDEEPPYPVRTAFQRCLGDSTDAVLVQHIESFVKAHPGSSNGSMTAVVMRALFDLCRAEISKIRLPTQVPSRR
Ga0310909_100377263	3300031947	Soil	MASKLKFFTPIVVALLVNPTVATELTYKEYAKASDVWKRGFVFGISQYVSAVAQPDEEPPYPVRTAFQKCLGAAVDSVLVQRVEAYVKAHPANSNGPMTAVVMRALFDFCRVEISKIRPPVPSQR
Ga0318507_104696601	3300032025	Soil	LFPIIVLLLVSSALATELTYKEYTKASEPWKRGFVFGISRYMSAVAQPDEEPPYPVRTAFQRCLGDSTDAVLVQHIESYVKAHPGSSNGPMTAVVMRALFDLCRAEISKTSRPTQVPSRR
Ga0310911_101811583	3300032035	Soil	ASKLKFFTPIVVALLVNPTVATELTYKEYAKASDIWKRGFVFGISQYVSAVAQPDEEPPYPVRTAFQKCLGAAVDSVLVQRVEAYVKAHPANSNGPMTAVVMRALFDFCRVEISKIRPPVPSQR
Ga0318533_101894381	3300032059	Soil	MASKLKFFTPIVVALLVNPTVATELTYKEYAKASDIWKRGFVFGISQYVSAVAQPDEEPPYPVRTAFQKCLGAAVDSVLVQRVEAYVKAHPANSNGPMTAVV
Ga0318513_106828061	3300032065	Soil	SSLRRFVDTVRTVSLASKLKTIFPVIVPLLVSSTQGAELTYKEFSKASETWKRGFVFGISRYMSTVAQPDEQPPYPVRTAFQRCLSDSTDIVLVRHLEAFVTANPSASHGPMITVVMRALFDLCRAEISKIKPVAPSQR
Ga0306924_115110382	3300032076	Soil	MASRLKILFTFIVLLLGSPTLATEFTYKEYAKAPEAWKRGFVFGVSRYISTVAQPDEEPPYPVRSAFQRCLGDSTDSVLVRHVETYVAANPSASHGPMITVVMRALFDLCRADISKIRPPTPQVR
Ga0306924_117114191	3300032076	Soil	FMAPKLKILLVIAVPFLVSPTKGTEFTYKEYAKASEVWKRGFVFGISRYMVTVAQPDEEPPYPVRAAFQRCLGDSTDSVLVHHVEAYVAANPSASHGPMITVVMRALFDLCRAEVSKTRPSTPIQNQR
Ga0318577_103123442	3300032091	Soil	ALLVNPTVATELTYKEYAKASDIWKRGFVFGISQYVSAVAQPDEEPPYPVRTAFQKCLGAAVDSVLVQRVEAYVKAHPANSNGPMTAVVMRALFDFCRVEISKIRPPVPSQR
Ga0306920_1007824322	3300032261	Soil	MRTVLSSGATIRSNTSIALKLSILSSVLVLVLARPILGADFNYREYAKASESWRRGFVFGISQYVSAVAQPDEEPPYPVRTAFKRCLGASTDSVLVRHVDKYVAANPGGSNGPMTAVIMRALFDFCRAEISRATPSPTYR
Ga0306920_1008130352	3300032261	Soil	MASNLKLLTPIIVPLLINPVMGTELTYKEYAKASEVWKRGFVFGISRYMSAVAQPDEEPPYPVRTAFQRCLGDSADVVLVQHVEAYVKAHPAGSNGPMTAVVVRALFDFCRIELSRIRPPVPSQR
Ga0306920_1011773751	3300032261	Soil	ASRLKILFPFIVLLLGSPTLATEFTYKEYAKAPEAWKRGFVFGVSRYISTVAQPDEEPPYPVRSAFQRCLGDSTDTVLVRHVETYVAANPSASHGPMITVVMRALFDLCRADISKIRPPTPQVR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F064055

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences