NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F064048

Metagenome / Metatranscriptome Family F064048

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F064048
Family Type Metagenome / Metatranscriptome
Number of Sequences 129
Average Sequence Length 58 residues
Representative Sequence SISKLRADNYDLRASGKGVFSVWEKNVTLRSGETKNLTLRLIYAKEIPKAYVKSKPKQ
Number of Associated Samples 96
Number of Associated Scaffolds 129

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.78 %
% of genes near scaffold ends (potentially truncated) 98.45 %
% of genes from short scaffolds (< 2000 bps) 93.02 %
Associated GOLD sequencing projects 88
AlphaFold2 3D model prediction Yes
3D model pTM-score0.27

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (98.450 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(48.062 % of family members)
Environment Ontology (ENVO) Unclassified
(44.961 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(49.612 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80
1JGI25381J37097_10120903
2JGI25390J43892_101775662
3Ga0058900_13377221
4Ga0066682_104009442
5Ga0070706_1019238092
6Ga0066697_101268233
7Ga0066692_106003651
8Ga0075015_1007074891
9Ga0075030_1007596941
10Ga0075018_103634261
11Ga0079222_101923931
12Ga0066660_104244353
13Ga0066660_106045933
14Ga0079219_100636301
15Ga0099791_102623103
16Ga0099794_100555943
17Ga0099794_101969672
18Ga0099794_103394482
19Ga0099795_101616633
20Ga0099830_102776071
21Ga0099830_114670031
22Ga0099828_115953452
23Ga0099792_102588223
24Ga0099792_104313291
25Ga0126384_105282202
26Ga0126373_101047671
27Ga0126373_119129341
28Ga0134109_100368341
29Ga0134064_101120842
30Ga0126370_103348031
31Ga0126370_108748261
32Ga0134066_103713792
33Ga0126381_10000563117
34Ga0150983_100740822
35Ga0150983_101928903
36Ga0150983_104080073
37Ga0150983_114679291
38Ga0150983_128247321
39Ga0150983_143770032
40Ga0137393_106541942
41Ga0137393_108316501
42Ga0137389_104882472
43Ga0137389_109638572
44Ga0137388_107518552
45Ga0137388_111332022
46Ga0137383_111308532
47Ga0137382_110125702
48Ga0137363_104471131
49Ga0137363_104662683
50Ga0137399_105887721
51Ga0137399_109821852
52Ga0137362_102368523
53Ga0137362_102725684
54Ga0137362_114352421
55Ga0137378_102278153
56Ga0137377_102870571
57Ga0137387_101509841
58Ga0137360_115701141
59Ga0137361_103442881
60Ga0137361_115220621
61Ga0137398_102599623
62Ga0137397_103361233
63Ga0137394_1000261913
64Ga0137394_105521631
65Ga0137394_115266242
66Ga0137359_105990702
67Ga0137419_105058803
68Ga0137419_109638602
69Ga0137419_116680292
70Ga0137404_103340471
71Ga0137404_106703142
72Ga0137404_106937922
73Ga0137404_107445781
74Ga0137407_117937671
75Ga0137410_112915981
76Ga0134079_100110075
77Ga0137420_11002811
78Ga0137420_11028071
79Ga0137418_1000451914
80Ga0137418_108039192
81Ga0137409_100730641
82Ga0137409_114811441
83Ga0137403_106203041
84Ga0134073_100957371
85Ga0182038_104732711
86Ga0187825_101208262
87Ga0187817_108047472
88Ga0187822_102081311
89Ga0187816_101270701
90Ga0187769_107952472
91Ga0187774_113920312
92Ga0066662_130272602
93Ga0179594_101536182
94Ga0179592_104175062
95Ga0210399_110975461
96Ga0210404_101883412
97Ga0210404_107126522
98Ga0210405_100965871
99Ga0210383_113143432
100Ga0210384_100133871
101Ga0210410_108205332
102Ga0242660_10325853
103Ga0207684_111583182
104Ga0209235_10874321
105Ga0209238_10496293
106Ga0209240_10569701
107Ga0257150_10723752
108Ga0257172_10902991
109Ga0257157_10058693
110Ga0257181_10351341
111Ga0209474_103608391
112Ga0179587_101310671
113Ga0209733_11779171
114Ga0208981_10618092
115Ga0209118_10642582
116Ga0209167_105346071
117Ga0209579_104080121
118Ga0209283_104502491
119Ga0209590_105883361
120Ga0209488_109204872
121Ga0209488_109602621
122Ga0209488_111164132
123Ga0137415_106806472
124Ga0318502_100955531
125Ga0307478_108709542
126Ga0307479_109138781
127Ga0318553_106350001
128Ga0307471_1024601812
129Ga0335077_101347344
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 3.49%    β-sheet: 12.79%    Coil/Unstructured: 83.72%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

510152025303540455055SISKLRADNYDLRASGKGVFSVWEKNVTLRSGETKNLTLRLIYAKEIPKAYVKSKPKQSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.27
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
98.4%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Freshwater Sediment
Watersheds
Vadose Zone Soil
Tropical Forest Soil
Grasslands Soil
Surface Soil
Agricultural Soil
Soil
Grasslands Soil
Soil
Soil
Hardwood Forest Soil
Soil
Tropical Peatland
Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
3.1%48.1%4.7%3.9%4.7%4.7%10.9%7.8%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI25381J37097_101209033300002557Grasslands SoilGHFSISKLGADNYDVRASGKGVFSVWEKNVTLRSGQTKDLTLRLIYAKEIPKAYVKRKQKQ*
JGI25390J43892_1017756623300002911Grasslands SoilADNYDLRASGKGVFSVWEKNVRLRSGETKDLTLRLIYAKEIPKAYVKRKQNQ*
Ga0058900_133772213300004099Forest SoilKSDNYDLRATGKGVFSECEKNISVKSGQTKSVTLRLIYAKQIPKAYVKTKPQQ*
Ga0066682_1040094423300005450SoilGHFSISKLGADNYDVRASGKGVFSVWEKNVMLRSGETKDLTLRLIYAKEIPKAYVKRKQKQ*
Ga0070706_10192380923300005467Corn, Switchgrass And Miscanthus RhizosphereQGRFTITKLRSDNYDLRASGKGVFSEWEKNVTVRSGRTKAVTLHLIYAKEIPKEYTKSKAKQ*
Ga0066697_1012682333300005540SoilTISRLRADNYDLRAYGKGVFSEREKNVSLRSGHTKSLTLRLIYAKEVPKEYVKSKPAQ*
Ga0066692_1060036513300005555SoilFTIRKLRADNYDIRASGKGVFSEWEKNVSLRTGQTKELTLRLIYARKIPKAYVKSKPQQ*
Ga0075015_10070748913300006102WatershedsNDIYDLRASGKGVFSEWEKNVTVRPGHTKSITLRLIYAKEIPEAYTKSKPKE*
Ga0075030_10075969413300006162WatershedsADNYDLRASGKGVFSEWQKNITLRSGATKELTLHLIYAKQIPKAYVKNNSKP*
Ga0075018_1036342613300006172WatershedsRFTISKLQADNYDLRASGKGVFSEWEKNVNLRPKETKNLTLRLIYAKKIPKAYVKSRPKQ
Ga0079222_1019239313300006755Agricultural SoilLRADSYDVRASGKGVYSDWEKNIPLRARQTKTVTLRLIYAKEIPKEYVKSKPKQ*
Ga0066660_1042443533300006800SoilDNYDVRASGKGVFSTWEKNVTLRSGENKNLTLRLVYAKEIPKAYVKNKPKQ*
Ga0066660_1060459333300006800SoilRADNYDMRASGRGVFSEWEKNIYVRKGKTKNVTLRLIYAKEIPKAYVRGKPNPQ*
Ga0079219_1006363013300006954Agricultural SoilGHFTIANLRADNYDMRASGKGVFSEWEKNITVRKGHTKNVTLRLIYAKEIPKAYVKGKPNPQ*
Ga0099791_1026231033300007255Vadose Zone SoilRLRSDNYDLRASGKGVFSEWEKNVTVRSGRTKTVTLHLIYAKEIPKEYTKSNAKQ*
Ga0099794_1005559433300007265Vadose Zone SoilRSDNYDLRASGRGVYSEWEKNVTVRSGQTKSVTLRLIYAKQIPKAYTKSKAKE*
Ga0099794_1019696723300007265Vadose Zone SoilHGYFSIGKLRADIYDLRASGKGVFSPWEKNIALRTGETKNLTLHLVYAKEIPKAYVKRKPKQ*
Ga0099794_1033944823300007265Vadose Zone SoilLKADNYDLRASGKGVFSEWEKNVNLRSGARKEVTLHLIYAKEIPKAYVKTKPKQ*
Ga0099795_1016166333300007788Vadose Zone SoilDSQGRFAITKLRSDNYDLRASGKGVFSEWEKNVTVHSGRTKSVTLRLIYAKEIPKEYTKSKAKQ*
Ga0099830_1027760713300009088Vadose Zone SoilDSHGYFSIGKLRADIYDLRASGKGVFSPWEKNIALRSGERKNLTLHLVYAKEIPKAYVKRKPKQ*
Ga0099830_1146700313300009088Vadose Zone SoilHGHFTISKLKADNYDLRASGKGVFSTWEKNVMLRNGETKNLTLQLIYAKDIPKAYVKSKPKQ*
Ga0099828_1159534523300009089Vadose Zone SoilDSHGRFSIAKLGADNYDLRASGKGVFSEWEKNITLRTGQTIDLTLHLVYARQIPKAYVKSNSKQ*
Ga0099792_1025882233300009143Vadose Zone SoilLRSDNYDLRASGKGVFSEWEKNVTVRSGRTKSVTLHLIYAREIPKEYAKSKAKQ*
Ga0099792_1043132913300009143Vadose Zone SoilQGRFTIRKLRSDNYDLRASGKGVFSEWEKNVTVRSGRTKSVTLHLIYAREIPKEYAKSKAKQ*
Ga0126384_1052822023300010046Tropical Forest SoilTIANLRADNYDMRASGKGVFSEWEKNVTVHRGQTKSVTLRLVYAKEVPKAYVKGKPNPQ*
Ga0126373_1010476713300010048Tropical Forest SoilKLRADNYDMRASGKGVFSEWQKNITVHSGQTKNVTLRLIYAKDVPKAYVKTKPNPQ*
Ga0126373_1191293413300010048Tropical Forest SoilKLRSDSYEVRATGKGVFSEWVKNVFVRSGQTKSVTLRLDYAKGVPKAYTATRTYDPQPH*
Ga0134109_1003683413300010320Grasslands SoilHFTITKLRSDNYDMRASGKGVFSEWQKNITVHSGQTKNVTLRLIYAKEVPKAYVKTKPNPQ*
Ga0134064_1011208423300010325Grasslands SoilSHGHFSISKLGADNYDVRASGKGVFSVWEKNVMLRSGETKDLTLRLIYAKEIPKAYVKRKQKQ*
Ga0126370_1033480313300010358Tropical Forest SoilKLRADNYDMRASGKGVFSEWEKNVTVRPGQTKEVTFRLIYAKEIPKAYVKSKPVQPQQ*
Ga0126370_1087482613300010358Tropical Forest SoilADNYDMRASGKGVFSEWEKNVTVRPGQTKEVTFRLIYAKEIPKAYVKSKPAQPQQ*
Ga0134066_1037137923300010364Grasslands SoilRFTISRLRADSYDVRASGKGVSSDWEKNIPLKAGQTKSVTLRLIYAKEIPKAYVKSKPKQ
Ga0126381_100005631173300010376Tropical Forest SoilGRFTITKLRADNYDMRASGKGVFSEWQKNITVRSGGTKNVTLRLIYARQVPKDYVKTKPNPQ*
Ga0150983_1007408223300011120Forest SoilDNYDLRASGKGVFSEWQKNISLRSGATKQLTLRLIYAKEIPKAYVKSSPKQ*
Ga0150983_1019289033300011120Forest SoilYDLRASGKGVFSEWEKNVSVRSGHTKSITLRLIYAKEIPKAYTKSTPKD*
Ga0150983_1040800733300011120Forest SoilTITKLKSDNYDLRATGKGVFSEWEKNISVKSGQTKSVTLRLIYAKQIPKAYVKTKPQQ*
Ga0150983_1146792913300011120Forest SoilDNYDLRASGKGVFSEWEKNVTVRSGRTKSVTLHLIYAKEIPKDYAKSKANQ*
Ga0150983_1282473213300011120Forest SoilMDTPSVSTAPSFVRASGKGVFSEWEKNVSLRSGQTKTVTLRLIYAKEIPKAYVKSKPQQ*
Ga0150983_1437700323300011120Forest SoilKADDYDLRASGKGVFSEWEKNIPLRSGETKNLTLHLIYAKEIPKAYVKRNPKQ*
Ga0137393_1065419423300011271Vadose Zone SoilSDNYDLRASGRGVFSEWEKNVTVRSGQTKSVTLRLIYAKEIPKAYTKSKAKE*
Ga0137393_1083165013300011271Vadose Zone SoilTDNYDLRASGKGVYSEWEKNVTVRSGQTKTVTLRLIYARQIPKAYTKSKAKP*
Ga0137389_1048824723300012096Vadose Zone SoilADNYDLRASGKGVFSEWEKNITLRSGAKNELTLRLIYAKQIPKAYVKSNSKQ*
Ga0137389_1096385723300012096Vadose Zone SoilKLRADIYDLRASGKGVFSPWEKNIALRSGERKNLTLHLVYAKEIPKAYVNRKPKH*
Ga0137388_1075185523300012189Vadose Zone SoilYDLRASGKGVFSEWEKNVNLRSGARKEVTLHLIYAKEIPKAYVKTKPKQ*
Ga0137388_1113320223300012189Vadose Zone SoilDSHGRFSIAKLGADNYDLRASGKGVFSEWEKNITLRTGQTIELTLHLVYARQIPKTYVKSNSKQ*
Ga0137383_1113085323300012199Vadose Zone SoilKADDYDLRASGKGVFSEWEKNIPLRSGETKNLTLRLIYAKEVPKAYVKSKPKQ*
Ga0137382_1101257023300012200Vadose Zone SoilDNYDLRASGKGVFSTWEKNVTLRSGENKNLTLRLVYAKEIPKAYVKNKPKQ*
Ga0137363_1044711313300012202Vadose Zone SoilQGHFTISKLKADNYDLRASGKGVFSEWEKNVNLRSGARKEVTLRLIYAKEIPKAYVKTKPKQ*
Ga0137363_1046626833300012202Vadose Zone SoilKLRSDNYDLRASGRGVFSEWEKNVTVRSGQTKSVTLRLIYAKEIPKAYTRSKAKE*
Ga0137399_1058877213300012203Vadose Zone SoilFTISKLKADNYDLRASGKGVFSEWEKNVNLRSGARKEVTLRLIYAKEIPKAYVKTKPKQ*
Ga0137399_1098218523300012203Vadose Zone SoilDIRASGKGVFSEWEKNVTLRTGQRKELTLRLIYARKIPKAYVKSKPRQ*
Ga0137362_1023685233300012205Vadose Zone SoilGHFTISKLKADNYDLRASGKGVFSEWEKNVNLRSGARKDVTLRLIYAKEIPKAYVKTKPKQ*
Ga0137362_1027256843300012205Vadose Zone SoilLRSDNYDLRASSKGVFSEWEKNVTVHSGRTKSVTLRLIYAKEIPKEYTKSKAKQ*
Ga0137362_1143524213300012205Vadose Zone SoilTISKLKADNYDLRASGKGVFSEWEKNVNLRSGARKEVTLRLIYAKEVPKAYVKTKPKQ*
Ga0137378_1022781533300012210Vadose Zone SoilDSSGHFTISKLKADDYDLRASGKGVFSEWEKNIPLRSGETKNLTLHLVYAKEIPKAYVKRNPKQ*
Ga0137377_1028705713300012211Vadose Zone SoilTKLRSDNYDMRASGKGVFSEWQKNITLHSGQTKNVTLRLIYAKEVPQAYVKTKPNPQ*
Ga0137387_1015098413300012349Vadose Zone SoilGRFAISGLRADSYDVRASGKGVYSDWEKNIPLRSRQTKTVTLRLIYAKEIPKEYVKSKPKQ*
Ga0137360_1157011413300012361Vadose Zone SoilDSRGIFTITKLGADNYDIRASGKGVFSEWEKNVTLRTGQRKELTLRLIYARKIPKAYVKSKPQQ*
Ga0137361_1034428813300012362Vadose Zone SoilKADNYDLRASGKGVFSEWEKNVNLRSGARKELTLRLIYAKEIPKAYVKTKPKQ*
Ga0137361_1152206213300012362Vadose Zone SoilGHFSISKLRADNYDLRASGKGVFSTWEKNVTLRSGENKNLTLRLVYAKEIPKAYVKSKPKQ*
Ga0137398_1025996233300012683Vadose Zone SoilGHFTISKLKADNYDLRASGKGVFSEWEKNVNLRSGARKEVTLRLIYAKEIPKAYVKTKPKQ*
Ga0137397_1033612333300012685Vadose Zone SoilFSISKLRADNYDLRASGKGVFSEWEKNVTLHSGQTKDLMLYLVYAKQIPKAYVKSNSKQ*
Ga0137394_10002619133300012922Vadose Zone SoilTKLRADNYDLRASGKGVFSEWEKNVTLHAGQTKDLTLYLVYAKQIPKAYVKSNSKQ*
Ga0137394_1055216313300012922Vadose Zone SoilGQFTITKLRADNYDIRASGKGVFSEWEKNVSLRTGQTKELTLRLIYARKIPKAYVKSKPQQ*
Ga0137394_1152662423300012922Vadose Zone SoilGQFTITKLRADNYDIRASGKGVFSEWEKNVTLRTGQRKELTLRLIYARKIPKAYVKSKPQQ*
Ga0137359_1059907023300012923Vadose Zone SoilRADNYDIRASGKGVFSEWEKNVTLRTGQRKELTLRLIYAKQIPKAYVKSKPQQ*
Ga0137419_1050588033300012925Vadose Zone SoilRFTITRLRSDNYDLRASGKGVFSEWEKNVTVRSGRTKTLTLHLIYAKEIPKEYTKGKAKQ
Ga0137419_1096386023300012925Vadose Zone SoilHGHFSISKLKPDNYDLRASGKGVFSEWQKNITLRSGATKELTVHLVYAKQIPKAYVKSTAKQ*
Ga0137419_1166802923300012925Vadose Zone SoilADNYDLRASGKGVFSTWEKNVTLRSGENKNLTLRLVYAREIPKAYVKSKPKQ*
Ga0137404_1033404713300012929Vadose Zone SoilITKLRADNYDLRASGKGVFSEWEKNVTLRAGQTKDLTLHLVYARQIPKAYVKSNSKQ*
Ga0137404_1067031423300012929Vadose Zone SoilFTISGLRADSYDVRASGKGVSSEWERNIPLRVRQTKSVTLRLIYAKEIPKEYVKSKPKQ*
Ga0137404_1069379223300012929Vadose Zone SoilRADNYDLRASGKGVFSEWVKNVNLRSGATKELTLQLIYAKQIPKAYTKSSARQ*
Ga0137404_1074457813300012929Vadose Zone SoilTITKLRADNYDIRASGRGVFSEWEKNVSLRTGQTKELTLRLIYARKIPKAYVKTKPQQ*
Ga0137407_1179376713300012930Vadose Zone SoilKLKADNYDLRASGKGVFSEWEKNVNLRSGARKEVTLRLIYAKEIPKAYVKTKPKQ*
Ga0137410_1129159813300012944Vadose Zone SoilITKLRADNYDLRASGKGVFSEWEKNVTLRAGQTKDLTLYLVYAKQIPKAYVKSNSKQ*
Ga0134079_1001100753300014166Grasslands SoilGHFSISKLGADNYDVRASGKGVFSVWEKNVTLRSGETKDLTLRLIYAREIPKAYVKRKQKQ*
Ga0137420_110028113300015054Vadose Zone SoilHIVRTDAHGHFTISKISKLRADNYDLRASGKGVFSEWVKNVNLRSGATKELTLQLIYAKQIPKAYTKSSAKQ*
Ga0137420_110280713300015054Vadose Zone SoilYDLRADLRASGKGVFSEWEKNVTVRSGRTKSVTLHLIYAREIPKEYAKSKAKQ*
Ga0137418_10004519143300015241Vadose Zone SoilLRSDNYDLRASGKGVFSEWEKNVTVRSGRTKTLTLHLIYAKEIPKEYTKGKAKQ*
Ga0137418_1080391923300015241Vadose Zone SoilVVRADSQGHFTISKLKADNYDLRASGKGVFSEWEKNVNLRSGARKELTLRLIYAKEIPKAYVKTKPKQ*
Ga0137409_1007306413300015245Vadose Zone SoilDLRASGKGVFSEWEKNVTVRSGRTKSVTLHLIYAREIPKEYAKSKAKQ*
Ga0137409_1148114413300015245Vadose Zone SoilFTITKLRADNYDIRASGKGVFSEWEKNVSVRTGQTKELTLRLIYARKIPKAYVKSKPQQ*
Ga0137403_1062030413300015264Vadose Zone SoilSRGQFTIRKLRADNYDIRASGKGVFSEWEKNVSLRTGQTKELTLRLIYARKIPKAYVKTKPQQ*
Ga0134073_1009573713300015356Grasslands SoilFTIANLRADNYDMRASGRGVFSEWEKNIYVRKGKTKNVTLRLIYAKEIPKAYVKGKPNPQ
Ga0182038_1047327113300016445SoilKLRADNYDMRASGKGVFSEWQKNITVRSGRTKNVTLRLIYAKEVPKAYVKSKPNPQ
Ga0187825_1012082623300017930Freshwater SedimentFTITKLRADNYDMRASSKGVFSEWQKNVALGRGQTKDVTLQLIYAKEMPKSPKDSKAKQ
Ga0187817_1080474723300017955Freshwater SedimentHFTISKLKADNYDLRASGKGVFSEWQKNITLRAGATKELTLHLIYAKQIPKAYTKSSPQQ
Ga0187822_1020813113300017994Freshwater SedimentMRASSKGVFSEWQKNVALGRGQTKDVTLQLIYAKEMPKSPKDSKAKQ
Ga0187816_1012707013300017995Freshwater SedimentHADAHGRFIIAKLKADNYDVRASGRGVFSEWEKNVNVRPGQEKTLTLRLIYAKQIPKAYVNSKPAQQ
Ga0187769_1079524723300018086Tropical PeatlandYDVRASGKGVFSEWEKNVTVKPGQEKTLTLHLIYAKQIPKAYVNSKPAQQ
Ga0187774_1139203123300018089Tropical PeatlandTKLSADAYDLRASGRGVFSEWQKNINLHSGQTKNVTLQLIYAKKIPKAYVKSAPKQQPQ
Ga0066662_1302726023300018468Grasslands SoilSISGLRADSYDVRASGKGVSSDWEKNIPLRARQTKTVTLRLIYAKEIPKAYVKSKPKQ
Ga0179594_1015361823300020170Vadose Zone SoilFSITKLRADNYDLRASGKGVFSEWEKNIMLRAGQTRDLTLHLVYAKEIPKAYVKSNSKQ
Ga0179592_1041750623300020199Vadose Zone SoilIRKLRSDNYDLRASGKGVFSEWEKNVTVRSGRTKSVTLHLIYAREIPKEYAKSKAKQ
Ga0210399_1109754613300020581SoilTITKLKSDNYDLRATGKGVFSEWEKNISVKSGQTKSVTLRLIYAKQIPKAYVKTKPQQ
Ga0210404_1018834123300021088SoilDSHGRFSISKLHADIYDVRASGRGVFSAWEKNIALRSGETKNLTLRLVYAKEIPKAYVKRSPKQ
Ga0210404_1071265223300021088SoilAKLRSDNYDLRASGRGVYSEWEKNVTVRSGQTKSVTLRLIYAKEIPKAYTKSKAKE
Ga0210405_1009658713300021171SoilLKADNYDIRASGKGVFSDWEKNVNIRPGQTKSLTLRLIYAKKIPKAYVNSKPAQQ
Ga0210383_1131434323300021407SoilNYDLRASGKGVFSEWQKNITLRSGARKELTLRLIYAKQIPKAYVKSNPKP
Ga0210384_1001338713300021432SoilIAKLRSDNYDLRASGRGVFSEWEKNVSVRSGQTKSVTLRLIYAKEIPKTYTKSKAKE
Ga0210410_1082053323300021479SoilSISKLRADNYDLRASGKGVFSVWEKNVTLRSGETKNLTLRLIYAKEIPKAYVKSKPKQ
Ga0242660_103258533300022531SoilYDLRASGKGVFSVWEKNISVKPGQTKSVTLHLIYAKKIPKAYVKTPAKQQ
Ga0207684_1115831823300025910Corn, Switchgrass And Miscanthus RhizosphereQGRFTITKLRSDNYDLRASGKGVFSEWEKNVTVRSGRTKAVTLHLIYAKEIPKEYTKSKAKQ
Ga0209235_108743213300026296Grasslands SoilADNYDMRASGKGVFSEWEKNITVHSGQTKSVTLRMIYAREIPKAYVKSKPQQ
Ga0209238_104962933300026301Grasslands SoilYDLRASGKGVFSTWEKNVTLRSGENKNLTLRLVYAKEIPKAYVKNKPKQ
Ga0209240_105697013300026304Grasslands SoilLKADNYDLRASGKGVFSEWEKNVNLRSGARKELTLRLIYAKQIPKAYVKSNSKQ
Ga0257150_107237523300026356SoilSISKLRTDNYDLRASGKGVFSTWEKNVTLRSGETKNLTLRLIYAKEIPKAYVKSKPKQ
Ga0257172_109029913300026482SoilQFSISKLRADNYDLRASGKGVFSTWEKNVTLRSGETKNLTLRLIYAKDIPKAYVKSKPKQ
Ga0257157_100586933300026496SoilDAHGQFSISKLRADNYDLRASGKGVFSTWEKNVTLRSGETKNLTLRLIYAKEIPKAYVKSKPKQ
Ga0257181_103513413300026499SoilYFSIGKLRADIYDLRASGKGVFSPWEKNIALRSGETKNLTLRLIYAKEIPKAYVKSKPKQ
Ga0209474_1036083913300026550SoilDSYDVRASGKGVSSDWEKNIPLRARQTKTVTLRLIYAKEIPKAYVKSKPKQ
Ga0179587_1013106713300026557Vadose Zone SoilIYDLRASGKGVFSEWEKNVAVRSGHTKSITLRLIYAKEIPKAYTKSKTKE
Ga0209733_117791713300027591Forest SoilVHTDAQGRFTITKLRSNDIYDLRASGEGVFSEWEKNVTVRSGHTKSITLRLIYAKEIPKAYTKSTAKQ
Ga0208981_106180923300027669Forest SoilTDSHGHFSISKLKADNYDLRASGKGVFSEWHKNITLRSGATKELTVHLVYAKQIPKAYVKSTAKQ
Ga0209118_106425823300027674Forest SoilMITKLRADNYDIRASGRGLFSEWEKNVTLRTGQRKELTLRLIYAKKIPKAYVKSKPQQ
Ga0209167_1053460713300027867Surface SoilKGRFTITKLRADNYDMRASSKGVFSEWQKNVALGRGQKKEITLQLIYAKEMPKASKTSKPKQ
Ga0209579_1040801213300027869Surface SoilFTITKLKSDNYEVRASAKGVFSEWEKNVTVRSGQTKSVTLRLEYAKEMPKAYGATPASSQKKQ
Ga0209283_1045024913300027875Vadose Zone SoilRTDNYDLRASGKGVFSEWEKNVTVRSGQTKSVTLRLIYAKEIPKAYTKSKAKD
Ga0209590_1058833613300027882Vadose Zone SoilLRADNYDLRAYGKGVFSEWEKNVSLRSGQTKSMTLRLIYAKEVPKEYVKSKPAQ
Ga0209488_1092048723300027903Vadose Zone SoilTIRKLRSDNYDLRASGKGVFSEWEKNVTVRSGRTKSVTLHLIYAREIPKEYAKSKAKQ
Ga0209488_1096026213300027903Vadose Zone SoilADSQGHFTISKLKADNYDLRASGKGVFSEWEKNVNLRSGARKEVTLRLIYAKEIPKAYVKTKPKQ
Ga0209488_1111641323300027903Vadose Zone SoilADNYDLRAYGKGVFSEWEKNVSLRSGQTKSMTLRLIYAKEVPKEYVKSKPAQ
Ga0137415_1068064723300028536Vadose Zone SoilARGRFTISGLRADSYDVRASGKGVYSDWEKNIPLRARQTKTVTLRLIYAKEIPKEYVKSKPKQ
Ga0318502_1009555313300031747SoilADNYDMRASGKGVFSEWQKNITVRSGQTKNVTLRLIYAKDVPTDYVKTKPNPQ
Ga0307478_1087095423300031823Hardwood Forest SoilGRFTITKLRSNDIYDLRASGKGVFSEWEKNVTVRSGQTKTVTLRLIYAKEIPKAYTKSKVKE
Ga0307479_1091387813300031962Hardwood Forest SoilNYDLRASGKGVYSEWEKNVTVRSGQTKSVTLRLIYAKEIPKAYTKSKAKE
Ga0318553_1063500013300032068SoilKLRADNYDMRASGKGVFSEWQKNITVRSGHTKNVTLRLIYAKDVPTDYVKTKPNPQ
Ga0307471_10246018123300032180Hardwood Forest SoilTDNYDLRASGKGVYSEWEKNVAVRSGQTKSVTLRLIYAKEIPKAYTKSKAKE
Ga0335077_1013473443300033158SoilHFTITKLKADAYDLRASGKGVFSEWQKNINLRKGQTKILTLRLIYAKEIPKAYVKSTPKQPQQ


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.