Metagenome / Metatranscriptome Family F064047

Overview

Basic Information

• Family ID: F064047
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 129
• Average Sequence Length: 42 residues
• Representative Sequence: MTLKKSSRAGLLALAFGILLGLFLSVATYDASYAQAQAPAA
• Number of Associated Samples: 129
• Number of Associated Scaffolds: 129

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 100.00 %
• % of genes near scaffold ends (potentially truncated): 87.60 %
• % of genes from short scaffolds (< 2000 bps): 79.07 %
• Associated GOLD sequencing projects: 125
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (58.915 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil (8.527 % of family members)
• Environment Ontology (ENVO): Unclassified (16.279 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Soil (non-saline) (52.713 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: Yes
• Secondary Structure distribution:
  α-helix: 44.93%
  β-sheet: 0.00%
  Coil/Unstructured: 55.07%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF00543	P-II	82.95
PF00909	Ammonium_transp	12.40
PF01494	FAD_binding_3	1.55
PF13622	4HBT_3	0.78
PF04073	tRNA_edit	0.78
PF13410	GST_C_2	0.78
PF03969	AFG1_ATPase	0.78

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG0347	Nitrogen regulatory protein PII	Signal transduction mechanisms [T]	82.95
COG0004	Ammonia channel protein AmtB	Inorganic ion transport and metabolism [P]	12.40
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	3.10
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	1.55
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	1.55
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	1.55
COG1485	Cell division protein ZapE (Z ring-associated ATPase), AFG1 superfamily	Cell cycle control, cell division, chromosome partitioning [D]	0.78

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	41.09 %
Unclassified	root	N/A	58.91 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	41.09 %
Unclassified	root	N/A	58.91 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	41.09 %
Unclassified	root	N/A	58.91 %

Level 4

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	41.09 %
Unclassified	root	N/A	58.91 %

Level 5

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	39.53 %
Unclassified	root	N/A	58.91 %

Level 6

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	39.53 %
Unclassified	root	N/A	58.91 %

Level 7

Name	Rank	Taxonomy	Distribution
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.78 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	16.28 %
Unclassified	root	N/A	58.91 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	15.50 %

Level 8

Name	Rank	Taxonomy	Distribution
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	14.73 %
Methylocella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocella	0.78 %
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	15.50 %
Unclassified	root	N/A	58.91 %

Level 9

Name	Rank	Taxonomy	Distribution
Methylocella silvestris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocella → Methylocella silvestris	0.78 %
Unclassified	root	N/A	58.91 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	11.63 %
unclassified Pseudolabrys	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys	15.50 %

Level 10

Name	Rank	Taxonomy	Distribution
Bradyrhizobium sp. STM 3843	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	11.63 %
Methylocella silvestris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocella → Methylocella silvestris	0.78 %
Pseudolabrys sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp.	5.43 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	10.08 %
Unclassified	root	N/A	58.91 %

Associated Scaffolds

Scaffold	Taxonomy	Length
2124908029|A2_v1_NODE_19396_len_3897_cov_12_346420	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3947
2124908036|A5_v_NODE_2361_len_924_cov_14_082252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp.	974
2124908037|B3_GZBA_v_NODE_14236_len_858_cov_12_911422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp.	908
2124908039|B3_v_NODE_456_len_1964_cov_39_250000	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp.	2014
2124908043|A2_c1_ConsensusfromContig64760	Not Available	776
3300000156|NODE_c0685464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocella → Methylocella silvestris	3221
3300000313|WSSedB1CaDRAFT_10080723	Not Available	614
3300000596|KanNP_Total_noBrdU_T14TCDRAFT_1025586	Not Available	645
3300000597|AF_2010_repII_A1DRAFT_10052856	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1052
3300000701|JGI12340J11893_101646	Not Available	687

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Engineered	Engineered	0.78%
Environmental	Environmental	86.05%
Host-Associated	Host-Associated	13.18%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	10.08%
Human	Host-Associated → Human	0.78%
Plants	Host-Associated → Plants	12.40%
Solid Waste	Engineered → Solid Waste	0.78%
Terrestrial	Environmental → Terrestrial	75.97%

Category

Habitat	Taxonomy	Distribution
Cave	Environmental → Terrestrial → Cave	0.78%
Digestive System	Host-Associated → Human → Digestive System	0.78%
Freshwater	Environmental → Aquatic → Freshwater	2.33%
Grass	Engineered → Solid Waste → Grass	0.78%
Marine	Environmental → Aquatic → Marine	3.10%
Peat	Environmental → Terrestrial → Peat	0.78%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.78%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.98%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.43%
Sediment	Environmental → Aquatic → Sediment	4.65%
Soil	Environmental → Terrestrial → Soil	73.64%

Type

Habitat	Taxonomy	Distribution
Composting	Engineered → Solid Waste → Grass → Composting	0.78%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.65%
Lake	Environmental → Aquatic → Freshwater → Lake	1.55%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.78%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.78%
Loam	Environmental → Terrestrial → Soil → Loam	13.95%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.10%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.39%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.33%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.78%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.78%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.78%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.30%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.10%

Subtype

Habitat	Taxonomy	Distribution
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.33%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.43%
Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor	0.78%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	0.78%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.63%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.75%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.55%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.78%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	14.73%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.33%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.78%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.78%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.40%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.98%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.10%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.33%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.33%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.78%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.78%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.78%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.78%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.78%

Habitat

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.33%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.78%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.78%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	8.53%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.78%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.55%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	3.10%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.88%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.78%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	0.78%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.78%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.55%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.55%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.55%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.33%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	2.33%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.78%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	1.55%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.78%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.78%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.78%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	5.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.33%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.78%
Sugar Cane Bagasse Incubating Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor → Sugar Cane Bagasse Incubating Bioreactor	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.33%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.78%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.98%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.78%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.55%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.55%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.33%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.78%

Associated Samples

Taxon OID	Sample Name	Habitat Type
2124908029	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active Layer A2	Environmental
2124908036	Soil microbial communities from permafrost in Bonanza Creek, Alaska, sample from Active Layer A5	Environmental
2124908037	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog Site B3	Environmental
2124908039	Soil microbial communities from permafrost in Bonanza Creek, Alaska, sample from Bog Site B4	Environmental
2124908043	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active Layer A2	Environmental
2124908044	Soil microbial communities from permafrost in Bonanza Creek, Alaska, sample from Active Layer A5	Environmental
2140918006	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P1	Environmental
3300000156	Sugar cane bagasse incubating bioreactor microbial communities from Sao Carlos, Brazil, that are aerobic and semianaerobic	Engineered
3300000313	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site B1 Cattail	Environmental
3300000596	Amended soil microbial communities from Kansas Great Prairies, USA - Total DNA no BrdU F1.4TC	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
A2_v1_00114240	2124908029	Soil	MTLKKPSRAGLLAIASGLLLGLFLSVATYNTSYAQTXXXXXXXX
A5_v_00260260	2124908036	Soil	MTLKKSSRAGLTTLALGVLLGLFLSVAAYTTSYAQPAPGAA
B3_GZBA_v_00234960	2124908037	Soil	MTLKKPSRAGLVALALGVLLGLFLSVAAYNTSYAQPAPGAAP
B3_v_00063820	2124908039	Soil	MTLKKSSRAGLTTLALGVLLGLFLSVAAYTTSYAQPAPGAAPA
A2_c1_00979710	2124908043	Soil	MTLKKSSRAGLTTLALGVLLGLFLSVAAYNTSYAQPAPGAAPAAPA
A5_c1_00801860	2124908044	Soil	MTLKKSSRAGLTTLALGVLLGLFLSVAAYNTSYAQPAPGAAPAAPAAAAP
P1_C_00993910	2140918006	Soil	MTLKKPSRAGLVALALGVLLGLFLSVAAYNTSYAQPAPGAAPAAPAAA
NODE_06854643	3300000156	Sugar Cane Bagasse Incubating Bioreactor	MTLKKSSRAGLFALAFGILMCLFLSVAHDVAYAQAQAPAAAP
WSSedB1CaDRAFT_100807231	3300000313	Wetland	MTLKKSSRAGLLALAFGILLGLFLSVATYNASYAQ
KanNP_Total_noBrdU_T14TCDRAFT_10255862	3300000596	Soil	MTLMKSSRAGLLALAFGILLGLFLSVASYEASYAQAQAPAA
AF_2010_repII_A1DRAFT_100528563	3300000597	Forest Soil	MTLKKSSRAGLMALAFGILLGLFLSVATYDATYAQ
JGI12333J11928_1008851	3300000676	Tropical Forest Soil	MTLMKSPRAGRLALAFGVVLSVFLSVAAFDASYAQPAPGAAPAAPAA
JGI12340J11893_1016462	3300000701	Tropical Forest Soil	MTLMKSPRAGRLALAFGVVLSVFLSVAAFDASYAQPAPGAAP
JGI12294J11894_1023772	3300000710	Tropical Forest Soil	MTLMKSPRAGRLALAFGVVLSVFLSVAAFDASYAQPAPGAAPAAP
JGI12371J11900_10138901	3300000729	Tropical Forest Soil	MTLMKSPRAGLLALAFGVVLSLFLSVAAFDASYAQAP
JGI12406J12870_1057212	3300000905	Tropical Forest Soil	MTLKKSSRAGLLALAFGVLLGLFLSVASFDASYAQTPAAPAAAPA
JGI12488J12863_1038291	3300000909	Tropical Forest Soil	MTLKKSSRAGLLALAFGVLLGLFLSVASFDASYAQTPA
JGI12407J12866_1046882	3300000935	Tropical Forest Soil	MTLMKSPGAGLLALAFGVVLSLFLSVGAFDASYAQPAPGAAP
JGI11615J12901_100189311	3300000953	Soil	MTLIKSSRAGLFALAFGILLGLFLSVSPYDISYAQTQAPAAAPAAAPAP
JGI10216J12902_1133565381	3300000956	Soil	MTLMKSSRAGLFALAFGILMCLFLSVAHDVAYAQA
JGI20207J14881_10078514	3300001398	Arctic Peat Soil	MTLMKSSRAGLLTLALGIMLGFFLSVATINSSHAQTPAAPAAAP
JGI20187J14854_10059182	3300001406	Arctic Peat Soil	MTLKKPSRAGLVALALGVLLGLFLSVAAYNTSYAQPAPGAAPAAPA
JGI12635J15846_103157083	3300001593	Forest Soil	MTLKKSSRAGLTTLALGVLLGLFLSVAAYTTSYAQPAPGAAPAAPAAA
JGI24129J20441_10168881	3300001870	Arctic Peat Soil	MTLKKPSRAGLVALALGVLLGLFLSVAAYNTSYAQPAPGAAPAAPAA
JGI24741J21665_10343681	3300001915	Corn Rhizosphere	MTLMKSSRAGLFALAFGILLSLFLSVPSYDVSYAQTQAPAAAPAAPA
JGI24752J21851_10179113	3300001976	Corn, Switchgrass And Miscanthus Rhizosphere	MTLMKSSRAGLFALAFGXLLSLFLSVPSYDVSYAQTQAPAAAPAAPAAPPPAC
JGI24747J21853_10039491	3300001978	Corn, Switchgrass And Miscanthus Rhizosphere	MTLMKSSRAGLFALAFGXLLSLFLSVPSYDVSYAQTQAPAAAPAAP
JGI24745J21846_10172531	3300002073	Corn, Switchgrass And Miscanthus Rhizosphere	MTLMKSSRAGLFALAFGILLSLFLSVPSYDVSYAQTQAPAAAPAAPAAP
JGI24145J26757_100753752	3300002183	Arctic Peat Soil	MTLKKPSRAGLVALALGVLLGLFLSVAAYNTSYAQPAP
JGI24034J26672_100137183	3300002239	Corn, Switchgrass And Miscanthus Rhizosphere	MTLMKSSRAGLFALAFGXLLSLFLSVPSYDVSYAQTQAPAAAPAAPAAPPPACANDPD
Ga0055455_100379961	3300003990	Natural And Restored Wetlands	MTLKKPSRAGLLSLAFGILLGLFLSVAVYDASYAQTPAPAAAAPAA
Ga0058859_114349992	3300004798	Host-Associated	MTLMKSSRAGLFALAFGILMCLFLSVAHDVAYAQAQAPAAAPAAAPATP
Ga0066815_100226653	3300005164	Soil	MTLMKSSRAGLLALAFGILLGLFLSVASYDVSYAQAQAPAAAPA
Ga0066810_100160423	3300005169	Soil	MTLMKSSRAGLLALAFGILLGIFLSVSTYDASYAQTPAPAAAAAPPAPA
Ga0068999_101122771	3300005205	Natural And Restored Wetlands	MTLKKSSRAGLLALAFGILLGLFLSVATYDATYAQAQAPAAAAPAA
Ga0065714_102841493	3300005288	Miscanthus Rhizosphere	MTLMKSSRAGLLALAFGILLGLFLSVASYDVSYAQAQAPAA
Ga0065712_102518453	3300005290	Miscanthus Rhizosphere	MTLMKSSRAGLFALAFGILLSLFLSVPSYDVSYAQTQAPAAAPAAPAAPPPACANDPD
Ga0070682_1018746181	3300005337	Corn Rhizosphere	MTLKKFSRAGLLALAFGVLLGLCLSTTAFDTASAQPAPAAAPA
Ga0070711_1009685261	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MTLKKSSRAGLTALAFGILLGIILSVGVYSTSYAQAPAPG
Ga0070665_1010201931	3300005548	Switchgrass Rhizosphere	MTLMKSSRAGLFALAFGILMCLFLSVAHDVAYAQAQAPAAAPAAAPA
Ga0074470_1129754115	3300005836	Sediment (Intertidal)	MTLKKPSRAGLLSLAFGILLGLFLSVAVYDASYAQTPAPAAAA
Ga0075298_10393242	3300005880	Rice Paddy Soil	MTLKKSSRAGLIALAFGVLLGLSLSVATYDTSYAQAQA
Ga0066794_101372541	3300005947	Soil	MTLKKSSRAGLLALAFGVLLGLFLSVAAYDASYAQAPATPP
Ga0075026_1004751421	3300006057	Watersheds	MTLKKSSRAGLKALAFGALLGFILSVGVHSASYAQAP
Ga0075015_1009075042	3300006102	Watersheds	MTLKKPSRAGLVALALGVLLSLFLSVAAYNTSYAQPAPGAAPA
Ga0075018_104008203	3300006172	Watersheds	MTLKKPSRAGLLALALGVLLGLFLSVASFDASYAQAP
Ga0070716_1018267641	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MTFKKFSRAGLMALAFGVVLGLFLSVSLVDHSFAQDTAAAAS
Ga0070712_1001287091	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MTLKKSSRAGLLALAFGILLGLFLSVATYDASYAQAQAPAA
Ga0075037_18848761	3300006426	Permafrost Soil	MTLKKTSRAGLLALALGVLLGLFLSVASFDASYAQAPA
Ga0079220_117616842	3300006806	Agricultural Soil	MTFKTLSRAGLLALAFGVLLTLCLSVASRDYGYAQTPAAPAAS
Ga0075518_10535453	3300006972	Arctic Peat Soil	MTLKKPSRAGLAALALGVLLGLFLSVAAYNTSYAQP
Ga0105238_100680445	3300009551	Corn Rhizosphere	MTLNKFSRAGLLALAHGVLLGLCLSTTAFDTASAQPAPAAGPAAAAP
Ga0105858_12045111	3300009661	Permafrost Soil	MTLKKPSRAGLAALALGVLLGLFLSVAAYTTSYAQPAPGAAP
Ga0114958_103316721	3300009684	Freshwater Lake	MTLKKPSRAGLLSLCFGILLGVFLSVAVYDASYAQTPPPAAAP
Ga0126374_116784702	3300009792	Tropical Forest Soil	MTLKKSSRAGLLALAFGILLGLFLSVATYDASYAQAQAPAAAPAA
Ga0134126_100150401	3300010396	Terrestrial Soil	MTLKKSSRAGLLALAFGILLGIFLSVATYSTSYAQTPAPG
Ga0137389_111144032	3300012096	Vadose Zone Soil	MTFKKSSRAGLLALAFGVLLGLFLSTASFDVSYAQTPAAAPAAAAAPPA
Ga0157299_102372412	3300012899	Soil	MTLMKSSRAGLFALAFGILIGLFLSVSSYDISYAQTQAP
Ga0137410_118798062	3300012944	Vadose Zone Soil	MTFKTLSRAGLVALAAGILLGLFLSLPTFDVSYAQA
Ga0164301_100261004	3300012960	Soil	MTLKKSSRAGLLALAFGIVLGLFLSVATYDASYAQT
Ga0164305_118698242	3300012989	Soil	MTLKKSSRAGLLALAFGIVLGLFLSVATYDASYAQTQAP
Ga0164283_10737061	3300013073	Soil	MTLKKVSRAGLLALALGVLLGLFLSVASFDAASAQTP
Ga0157370_107170101	3300013104	Corn Rhizosphere	MTLKKSSRAGLLALAFGILLGLFLSVASYDVSFAQAQAPAATA
Ga0120111_11386941	3300013764	Permafrost	MTLKKPSRAGLAALALGVLLGLFLSVAAYNTSYAQPAPAAAPAAPA
Ga0075359_10533041	3300014266	Natural And Restored Wetlands	MTLKKFTRAGLMGIALTVLLGLFLSVASFDASHAQAPA
Ga0075353_10510581	3300014321	Natural And Restored Wetlands	MTLKKSSRAGVVALAFGILLSLFLSVATYDTTYAQAQAPAAA
Ga0132257_1028112431	3300015373	Arabidopsis Rhizosphere	MTLKKSSRAGLFALAFGILMCLFLSVAHDVAYAQAQAPAAA
Ga0187785_100954191	3300017947	Tropical Peatland	MTLKKSSRAGLMGLVLGAILAIILSVGVVSHSYAQAPAPGAAP
Ga0184608_100938021	3300018028	Groundwater Sediment	MTLMKSSRAGLFALAFGILIGLFLSVATYEASYAQAQAPAA
Ga0184611_11591251	3300018067	Groundwater Sediment	MTLKKSSRAGLLALAFGILLGLFLSVAAYDASYAQAQAPAGAPAA
Ga0187774_105169171	3300018089	Tropical Peatland	MTLKKSSRAGLIALAFGVMFGIVLCLGLNTASAQAPAPGAAPAAA
Ga0210401_112472881	3300020583	Soil	MTSKKTTRAGLFALALGVLLGLFLSVASINSSYAQAPAAPPAA
Ga0214182_10221703	3300020714	Freshwater	MTLKKFSRAGLVAGALGILLGLFLSVASFDASYAQA
Ga0210397_111596112	3300021403	Soil	MTSKKTTRAGLFALALGVLLGLFLSVASINSSYAQAPAAP
Ga0213878_105370832	3300021444	Bulk Soil	MTSKNTARAGWFALALGVLFGLFLSVASVNSAFAQAPAAAPAAA
Ga0187846_101001831	3300021476	Biofilm	MKSKKISRGGLWVLALGALFGLFLSVANINSSYAQSPAAQPAQAAATS
Ga0210402_116236422	3300021478	Soil	MTSKKTARAGLFALALGVLLGLFLSVASINSSYAQAP
Ga0210410_113360111	3300021479	Soil	MTSKKTARAGLFALALGVLLGLFLSVASINSSYAQAPAAPPAAEPAA
Ga0247786_10005761	3300022883	Soil	MTLMKSSRAGLFALAFGILLSLFLSVPSYDVSYAQTQAPAAAPAAPAAPPPACAND
Ga0247784_10431303	3300023270	Plant Litter	MTLMKSSRAGLFALAFGILLSLFLSVPSYDVSYAQTQAPAAAPAAPAAPPP
Ga0247691_10358552	3300024222	Soil	MTLMKSSRAGLFALAFGILMCLFLSVAHDVAYAQAQAPAAAPA
Ga0247692_10292083	3300024279	Soil	MTLMKSSRAGLFALAFGILMCLFLSVAHDVAYAQAQAP
Ga0208848_10977792	3300025509	Arctic Peat Soil	MTLKKPSRAGLAALALGVLLGLFLSVAAYNTSYAQPAP
Ga0208586_10247751	3300025588	Arctic Peat Soil	MTLIKSSRAGLLTLALGIMLGLFLSVATINSSHAQTPMAPAAAPA
Ga0208220_10087336	3300025627	Arctic Peat Soil	MTLKTPSRAGLLALAFGLLLALILSVSLYSTSYAQTPAPGATPAATAAPTPP
Ga0209638_11691861	3300025725	Arctic Peat Soil	MTLKKSSRAGLLALAFGVLLGLFLSVAAYDASYAQAPATPPAA
Ga0210100_10016773	3300025780	Natural And Restored Wetlands	MTLKKLSGAGLLALVFGVMLALFLSVATYDTSYAQT
Ga0209584_100949293	3300025878	Arctic Peat Soil	MTLKKTSRAGLLALALGVLLGLFLSVASFDASYAQAPAP
Ga0209585_101257973	3300025891	Arctic Peat Soil	MTLKKPSRAGLLSLCFGILLGLFLSVAVYDASFAQT
Ga0207680_103165663	3300025903	Switchgrass Rhizosphere	MTLMKSSRAGLFALAFGILMCLFLSVAHDVAYAQAQA
Ga0207685_100907761	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MTLKKSSRAGLLALAFGILLGLFLSVATYDASYAQAQAPAATAAPPAP
Ga0207654_104213863	3300025911	Corn Rhizosphere	MTLKKSSRAGLLALAFGILLGLFLSVATYDASYAQAQAPAAAAAPPAP
Ga0207663_104352351	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MTLMKSSRAGLFALAFGILMCLFLSVAHDVAYAQAQAPAA
Ga0207670_112259381	3300025936	Switchgrass Rhizosphere	MTLKKSSRAGLLALAFGILLGLFLSVATYDASYAQAQAP
Ga0207668_112814381	3300025972	Switchgrass Rhizosphere	MTLKKSSRAGLLALAFGILLGLFLSVATYDASYAQAQAPAAAAAPP
Ga0208290_10179243	3300026066	Natural And Restored Wetlands	MTLKKLSGAGLLALVFGVMLALCLSVATYDTSYAQ
Ga0207575_1018812	3300026748	Soil	MTLMKSSRAGLFALAFGILMCLFLSVAHDVAYAQAQ
Ga0207605_1008981	3300026757	Soil	MTLMKSSRAGLFALAFGILLSLFLSVPSYDVSYAQTQAPAAAPA
Ga0207595_1020691	3300026782	Soil	MTLMKSSRAGLLALAFGILLGLFLSVASYDVSYAQAQAPAAAPAA
Ga0207634_1011973	3300026818	Soil	MTLMKSSRAGLFALAFGILLSLFLSVPSYDVSYAQTQAPAAAPAAPAAPPPA
Ga0207502_1002133	3300026828	Soil	MTLMKSSRAGLFALAFGILLSLFLSVPSYDVSYAQTQA
Ga0207804_1231801	3300026849	Tropical Forest Soil	MTLKKSSRAGLLALAFGILLGLFLSVASFDASYAQ
Ga0208762_10014181	3300026870	Soil	MTLKKSSRAGLVALALGIMLGLFLSVASFDASYAQAPAPERTKRR
Ga0207803_10449911	3300027000	Tropical Forest Soil	MTLKKSSRAGLLALAFGILLGLFLSVASFDASYAQAPAP
Ga0209982_10203073	3300027552	Arabidopsis Thaliana Rhizosphere	MTLMKSSRAGLFALAFGILLSLFLSVPSYDVSYAQTQAP
Ga0209178_10069161	3300027725	Agricultural Soil	MTLKKSSRAGLLALAFGIVLGLFLSVASYDVSYAQA
Ga0209177_100848973	3300027775	Agricultural Soil	MTLMKSSRAGLFALAFGIVLGLFLSVSSYDISYAQTQAPAAAPAAPAAPPPA
Ga0307323_100034651	3300028787	Soil	MTLKKSSRAGLFALAFGILIGLFLSVATYEASYAQAQAPAAAPAAA
Ga0265338_111037231	3300028800	Rhizosphere	MTLKKPSRAGLTALVFGILLALVLSVSLQSSSYAQAPAPGAAPAP
Ga0307296_107091171	3300028819	Soil	MTFKKSSRAGLFALAFGILIGLFLSVATYEASYAQAQAPAAAPAAA
Ga0307312_111047601	3300028828	Soil	MTFKKSSRAGLFALAFGILIGLFLSVATYEASYAQAQAPAAAAPPAP
Ga0310886_104324232	3300031562	Soil	MTLKKLTRAGLAALAFGAALGIFLNFASINSSYAQAPAA
Ga0318500_105293762	3300031724	Soil	MTLMKSPRAGLLALAFGVVLSLFLSVAAFDASYAQPAPGAA
Ga0302321_1035850481	3300031726	Fen	MTLKKFSRAGLVGIALTVLLGLFLSVASFDASHAQAP
Ga0307468_1008264612	3300031740	Hardwood Forest Soil	MTLMKSSRAGLFALAFGILLGLFLSVPSYDVSYAQTQAPAAAPAA
Ga0318554_106984972	3300031765	Soil	MTLKKSSRAGLFALAFGILMCLFLSVAHDVAYAQAPAAAPAAAPAT
Ga0310907_103822151	3300031847	Soil	MTLKKLTRAGLAALAFGAALGIFLNFASINSSYAQAPAAPAA
Ga0306919_114910822	3300031879	Soil	MTLKKSSRAGLVALAFGILLGLFLSVATYDASFAQA
Ga0306923_100609486	3300031910	Soil	MTLMKFPRAGLLALALGVVLSVFLSVAAFDASYAQPAPGAAPAA
Ga0214473_117877202	3300031949	Soil	MTLKKSSRAGLLALAFGVLLGLFLSVAAYDTSYAQAP
Ga0307479_104120543	3300031962	Hardwood Forest Soil	MTSKKTARAGLFALALGVLLGLFLSVASINSSYAQAPAAPP
Ga0318504_104149522	3300032063	Soil	MTLMKSPRAGLLALAFGVVLSLFLSVAAFDASYAQPAPGAAPAAPA
Ga0315276_114989902	3300032177	Sediment	MTLKKISRAGLLALVLGTVLGLFLSVASFDASYAQTLAPA
Ga0335085_110160851	3300032770	Soil	MTLKKSSRAGLTALAFGILLGIILSVGLYSTSYAQAPAPG
Ga0335080_119243012	3300032828	Soil	MTLKKSSRAGLLALAFGILLGLFLSVGTINSSYAQTPPAPAAAPAPAPA
Ga0335081_121146971	3300032892	Soil	MTFKRSSRAGLKALAFGALLGFILSVGVHSASYAQAPAAPAAAPA
Ga0310914_118226302	3300033289	Soil	MTLKKSSRAGLVALAFGILLGLFLSVATYDASFAQ
Ga0310811_111019381	3300033475	Soil	MTLNKFSRAGLLALAFGVLLGLCLSMTTFDTSSAQPAPAAAPA
Ga0314801_129729_457_591	3300034676	Soil	MTLMKSSRAGLLALAFGILLGLFLSVASYDVSYAQAQAPAAAPAT