Metagenome / Metatranscriptome Family F064034

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F064034
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	80 residues
Representative Sequence	MKEISIKIDDELYRRASRKVEDLEAEVNQHVTEYLEAINGDDDGILAARAHMADLFQATSNFGVGVRPSREEMHERGSIH
Number of Associated Samples	113
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	14.73 %
% of genes near scaffold ends (potentially truncated)	19.38 %
% of genes from short scaffolds (< 2000 bps)	73.64 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (89.147 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (24.806 % of family members)
Environment Ontology (ENVO)	Unclassified (37.209 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.961 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 49.07% β-sheet: 0.00% Coil/Unstructured: 50.93%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF01850	PIN	21.71
PF10988	DUF2807	11.63
PF04055	Radical_SAM	3.10
PF06463	Mob_synth_C	3.10
PF13289	SIR2_2	1.55
PF04909	Amidohydro_2	1.55
PF13676	TIR_2	1.55
PF05685	Uma2	1.55
PF04337	DUF480	0.78
PF03061	4HBT	0.78
PF01029	NusB	0.78
PF03448	MgtE_N	0.78
PF00885	DMRL_synthase	0.78
PF07676	PD40	0.78
PF07687	M20_dimer	0.78
PF13147	Obsolete Pfam Family	0.78
PF08241	Methyltransf_11	0.78
PF11236	DUF3037	0.78
PF01425	Amidase	0.78
PF01464	SLT	0.78
PF02463	SMC_N	0.78
PF13594	Obsolete Pfam Family	0.78
PF13302	Acetyltransf_3	0.78
PF01402	RHH_1	0.78
PF01593	Amino_oxidase	0.78
PF00213	OSCP	0.78
PF01050	MannoseP_isomer	0.78
PF01979	Amidohydro_1	0.78
PF00149	Metallophos	0.78
PF13470	PIN_3	0.78
PF13191	AAA_16	0.78
PF13720	Acetyltransf_11	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG2896	GTP 3',8-cyclase (molybdenum cofactor biosynthesis protein MoaA)	Coenzyme transport and metabolism [H]	3.10
COG4636	Endonuclease, Uma2 family (restriction endonuclease fold)	General function prediction only [R]	1.55
COG0054	6,7-dimethyl-8-ribityllumazine synthase (Riboflavin synthase beta chain)	Coenzyme transport and metabolism [H]	0.78
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.78
COG0712	FoF1-type ATP synthase, delta subunit	Energy production and conversion [C]	0.78
COG2239	Mg/Co/Ni transporter MgtE (contains CBS domain)	Inorganic ion transport and metabolism [P]	0.78
COG3132	Uncharacterized conserved protein YceH, UPF0502 family	Function unknown [S]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	89.15 %
Unclassified	root	N/A	10.85 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	89.15 %
Unclassified	root	N/A	10.85 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	89.15 %
Unclassified	root	N/A	10.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	24.03 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	17.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	14.73 %
Unclassified	root	N/A	10.85 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.85 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	9.30 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6.20 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	1.55 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.78 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.78 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.30 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3.88 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	1.55 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	0.78 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.78 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.30 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	1.55 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	0.78 %
Methylocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	0.78 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	0.78 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.30 %
unclassified Pyrinomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae	0.78 %
Pyrinomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas	0.78 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	0.78 %
Methylocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis	0.78 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	0.78 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.30 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.78 %
Cyclobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae	0.78 %
Pyrinomonas methylaliphatogenes	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	0.78 %
Methylocystis rosea	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis rosea	0.78 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	0.78 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.30 %
Echinicola	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae → Echinicola	0.78 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.78 %
Pyrinomonas methylaliphatogenes	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	0.78 %
Methylocystis rosea	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis rosea	0.78 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	0.78 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.30 %
Echinicola vietnamensis	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae → Echinicola → Echinicola vietnamensis	0.78 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.78 %
Pyrinomonas methylaliphatogenes	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	0.78 %
Methylocystis rosea	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis rosea	0.78 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	0.78 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000531\|CNBas_1013156	Not Available	521	Open in IMG/M
3300000574\|JGI1357J11328_10017577	All Organisms → cellular organisms → Bacteria	3654	Open in IMG/M
3300002558\|JGI25385J37094_10155331	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis rosea	613	Open in IMG/M
3300002908\|JGI25382J43887_10213216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	919	Open in IMG/M
3300004479\|Ga0062595_100648511	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	835	Open in IMG/M
3300005167\|Ga0066672_10033333	All Organisms → cellular organisms → Bacteria	2836	Open in IMG/M
3300005167\|Ga0066672_10475952	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300005171\|Ga0066677_10105331	All Organisms → cellular organisms → Bacteria	1498	Open in IMG/M
3300005175\|Ga0066673_10273015	All Organisms → cellular organisms → Bacteria	982	Open in IMG/M
3300005176\|Ga0066679_10185461	All Organisms → cellular organisms → Bacteria	1320	Open in IMG/M
3300005178\|Ga0066688_10375720	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	921	Open in IMG/M
3300005179\|Ga0066684_10651599	Not Available	707	Open in IMG/M
3300005180\|Ga0066685_10323418	All Organisms → cellular organisms → Bacteria	1069	Open in IMG/M
3300005181\|Ga0066678_10576315	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	748	Open in IMG/M
3300005181\|Ga0066678_10577499	Not Available	747	Open in IMG/M
3300005187\|Ga0066675_10247978	All Organisms → cellular organisms → Bacteria	1271	Open in IMG/M
3300005187\|Ga0066675_11059294	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	607	Open in IMG/M
3300005331\|Ga0070670_100004687	All Organisms → cellular organisms → Bacteria	11470	Open in IMG/M
3300005450\|Ga0066682_10098702	All Organisms → cellular organisms → Bacteria → Proteobacteria	1832	Open in IMG/M
3300005456\|Ga0070678_102085967	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae → Echinicola → Echinicola vietnamensis	537	Open in IMG/M
3300005471\|Ga0070698_100000063	All Organisms → cellular organisms → Bacteria	78062	Open in IMG/M
3300005549\|Ga0070704_102185646	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	514	Open in IMG/M
3300005554\|Ga0066661_10101878	All Organisms → cellular organisms → Bacteria	1717	Open in IMG/M
3300005556\|Ga0066707_10276200	All Organisms → cellular organisms → Bacteria → Proteobacteria	1099	Open in IMG/M
3300005559\|Ga0066700_10440952	All Organisms → cellular organisms → Bacteria → Proteobacteria	915	Open in IMG/M
3300005561\|Ga0066699_10423692	Not Available	953	Open in IMG/M
3300005569\|Ga0066705_10002535	All Organisms → cellular organisms → Bacteria	7085	Open in IMG/M
3300005576\|Ga0066708_10553728	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300005586\|Ga0066691_10810584	All Organisms → cellular organisms → Bacteria → Acidobacteria	552	Open in IMG/M
3300005843\|Ga0068860_100049071	All Organisms → cellular organisms → Bacteria	4023	Open in IMG/M
3300006032\|Ga0066696_10129420	All Organisms → cellular organisms → Bacteria → Acidobacteria	1553	Open in IMG/M
3300006034\|Ga0066656_10510297	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	784	Open in IMG/M
3300006173\|Ga0070716_100000003	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	312721	Open in IMG/M
3300006794\|Ga0066658_10228270	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	992	Open in IMG/M
3300006797\|Ga0066659_10493183	All Organisms → cellular organisms → Bacteria	981	Open in IMG/M
3300006800\|Ga0066660_10542769	All Organisms → cellular organisms → Bacteria	976	Open in IMG/M
3300006854\|Ga0075425_101297954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	825	Open in IMG/M
3300006871\|Ga0075434_101500211	All Organisms → cellular organisms → Bacteria → PVC group	683	Open in IMG/M
3300006876\|Ga0079217_11443957	Not Available	540	Open in IMG/M
3300006881\|Ga0068865_100052063	All Organisms → cellular organisms → Bacteria	2836	Open in IMG/M
3300009012\|Ga0066710_103366438	All Organisms → cellular organisms → Bacteria → PVC group	608	Open in IMG/M
3300009088\|Ga0099830_10168246	All Organisms → cellular organisms → Bacteria	1698	Open in IMG/M
3300009094\|Ga0111539_10058826	All Organisms → cellular organisms → Bacteria	4559	Open in IMG/M
3300009137\|Ga0066709_101194981	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1119	Open in IMG/M
3300009137\|Ga0066709_103898696	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300009148\|Ga0105243_10525773	All Organisms → cellular organisms → Bacteria	1126	Open in IMG/M
3300009148\|Ga0105243_12959288	All Organisms → cellular organisms → Bacteria → PVC group	515	Open in IMG/M
3300009156\|Ga0111538_12221976	All Organisms → cellular organisms → Bacteria → PVC group	689	Open in IMG/M
3300010303\|Ga0134082_10147952	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	948	Open in IMG/M
3300010396\|Ga0134126_10000621	All Organisms → cellular organisms → Bacteria	44676	Open in IMG/M
3300010396\|Ga0134126_10027674	All Organisms → cellular organisms → Bacteria → Proteobacteria	7183	Open in IMG/M
3300010397\|Ga0134124_10009848	All Organisms → cellular organisms → Bacteria → Acidobacteria	7706	Open in IMG/M
3300010400\|Ga0134122_11558898	All Organisms → cellular organisms → Bacteria → PVC group	682	Open in IMG/M
3300010401\|Ga0134121_10004208	All Organisms → cellular organisms → Bacteria → Acidobacteria	11811	Open in IMG/M
3300010401\|Ga0134121_10130566	All Organisms → cellular organisms → Bacteria → Acidobacteria	2129	Open in IMG/M
3300011003\|Ga0138514_100124085	Not Available	568	Open in IMG/M
3300011196\|Ga0137482_100031	All Organisms → cellular organisms → Bacteria	19049	Open in IMG/M
3300011437\|Ga0137429_1240655	Not Available	561	Open in IMG/M
3300012096\|Ga0137389_10503346	All Organisms → cellular organisms → Bacteria → Proteobacteria	1039	Open in IMG/M
3300012198\|Ga0137364_10325713	All Organisms → cellular organisms → Bacteria → Proteobacteria	1144	Open in IMG/M
3300012203\|Ga0137399_10547219	All Organisms → cellular organisms → Bacteria → Proteobacteria	972	Open in IMG/M
3300012205\|Ga0137362_10019378	All Organisms → cellular organisms → Bacteria → Proteobacteria	5209	Open in IMG/M
3300012208\|Ga0137376_10096323	All Organisms → cellular organisms → Bacteria	2502	Open in IMG/M
3300012210\|Ga0137378_10395969	Not Available	1281	Open in IMG/M
3300012210\|Ga0137378_10488347	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	1138	Open in IMG/M
3300012349\|Ga0137387_10069225	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2400	Open in IMG/M
3300012359\|Ga0137385_10480315	Not Available	1053	Open in IMG/M
3300012361\|Ga0137360_11100476	All Organisms → cellular organisms → Bacteria → PVC group	686	Open in IMG/M
3300012362\|Ga0137361_10008862	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	7040	Open in IMG/M
3300012582\|Ga0137358_10734422	All Organisms → cellular organisms → Bacteria → PVC group	660	Open in IMG/M
3300012668\|Ga0157216_10505188	All Organisms → cellular organisms → Bacteria → PVC group	521	Open in IMG/M
3300012685\|Ga0137397_10199264	All Organisms → cellular organisms → Bacteria	1489	Open in IMG/M
3300012918\|Ga0137396_10215004	All Organisms → cellular organisms → Bacteria → PVC group	1415	Open in IMG/M
3300012923\|Ga0137359_10127883	All Organisms → cellular organisms → Bacteria	2257	Open in IMG/M
3300012923\|Ga0137359_10985776	All Organisms → cellular organisms → Bacteria → PVC group	724	Open in IMG/M
3300012925\|Ga0137419_10127266	All Organisms → cellular organisms → Bacteria	1808	Open in IMG/M
3300012925\|Ga0137419_11442236	All Organisms → cellular organisms → Bacteria → PVC group	582	Open in IMG/M
3300012927\|Ga0137416_11188008	All Organisms → cellular organisms → Bacteria → PVC group	687	Open in IMG/M
3300012927\|Ga0137416_11582329	All Organisms → cellular organisms → Bacteria → Acidobacteria	596	Open in IMG/M
3300012929\|Ga0137404_10002665	All Organisms → cellular organisms → Bacteria	11858	Open in IMG/M
3300012930\|Ga0137407_12165131	All Organisms → cellular organisms → Bacteria → PVC group	531	Open in IMG/M
3300013297\|Ga0157378_10362996	All Organisms → cellular organisms → Bacteria	1418	Open in IMG/M
3300013770\|Ga0120123_1038197	All Organisms → cellular organisms → Bacteria	1010	Open in IMG/M
3300015069\|Ga0167633_124407	Not Available	599	Open in IMG/M
3300015197\|Ga0167638_1004833	All Organisms → cellular organisms → Bacteria	3131	Open in IMG/M
3300018028\|Ga0184608_10434887	All Organisms → cellular organisms → Bacteria → PVC group	566	Open in IMG/M
3300018056\|Ga0184623_10219331	All Organisms → cellular organisms → Bacteria → PVC group	873	Open in IMG/M
3300018469\|Ga0190270_10179605	All Organisms → cellular organisms → Bacteria → Acidobacteria	1761	Open in IMG/M
3300018469\|Ga0190270_11337390	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300018476\|Ga0190274_10002674	All Organisms → cellular organisms → Bacteria	10532	Open in IMG/M
3300018482\|Ga0066669_10191400	Not Available	1556	Open in IMG/M
3300018482\|Ga0066669_11459824	All Organisms → cellular organisms → Bacteria → PVC group	621	Open in IMG/M
3300018920\|Ga0190273_11271391	All Organisms → cellular organisms → Bacteria → PVC group	632	Open in IMG/M
3300019360\|Ga0187894_10454124	Not Available	562	Open in IMG/M
3300019789\|Ga0137408_1433961	Not Available	1337	Open in IMG/M
3300019883\|Ga0193725_1009166	All Organisms → cellular organisms → Bacteria	2822	Open in IMG/M
3300019885\|Ga0193747_1010563	All Organisms → cellular organisms → Bacteria → Acidobacteria	2224	Open in IMG/M
3300019885\|Ga0193747_1031715	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1313	Open in IMG/M
3300020010\|Ga0193749_1000280	All Organisms → cellular organisms → Bacteria	7808	Open in IMG/M
3300024317\|Ga0247660_1000520	All Organisms → cellular organisms → Bacteria → Acidobacteria	4375	Open in IMG/M
3300025923\|Ga0207681_10005530	All Organisms → cellular organisms → Bacteria → Proteobacteria	7761	Open in IMG/M
3300025935\|Ga0207709_10342637	All Organisms → cellular organisms → Bacteria → Acidobacteria	1125	Open in IMG/M
3300025938\|Ga0207704_10144326	All Organisms → cellular organisms → Bacteria → Acidobacteria	1670	Open in IMG/M
3300025939\|Ga0207665_10000003	All Organisms → cellular organisms → Bacteria → Acidobacteria	220666	Open in IMG/M
3300025941\|Ga0207711_10306780	All Organisms → cellular organisms → Bacteria → Acidobacteria	1465	Open in IMG/M
3300025942\|Ga0207689_10370172	All Organisms → cellular organisms → Bacteria → Acidobacteria	1192	Open in IMG/M
3300026295\|Ga0209234_1093155	All Organisms → cellular organisms → Bacteria → PVC group	1140	Open in IMG/M
3300026296\|Ga0209235_1179464	All Organisms → cellular organisms → Bacteria → PVC group	780	Open in IMG/M
3300026298\|Ga0209236_1038351	All Organisms → cellular organisms → Bacteria	2489	Open in IMG/M
3300026308\|Ga0209265_1078074	All Organisms → cellular organisms → Bacteria	951	Open in IMG/M
3300026313\|Ga0209761_1164965	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1028	Open in IMG/M
3300026317\|Ga0209154_1110831	All Organisms → cellular organisms → Bacteria → Proteobacteria	1165	Open in IMG/M
3300026317\|Ga0209154_1320318	All Organisms → cellular organisms → Bacteria → PVC group	509	Open in IMG/M
3300026325\|Ga0209152_10254673	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	653	Open in IMG/M
3300026335\|Ga0209804_1167035	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	968	Open in IMG/M
3300026523\|Ga0209808_1211100	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300026548\|Ga0209161_10304017	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	768	Open in IMG/M
3300026550\|Ga0209474_10022971	All Organisms → cellular organisms → Bacteria	4788	Open in IMG/M
3300026550\|Ga0209474_10176458	All Organisms → cellular organisms → Bacteria	1377	Open in IMG/M
3300027591\|Ga0209733_1006621	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2988	Open in IMG/M
3300027674\|Ga0209118_1139607	Not Available	672	Open in IMG/M
3300027815\|Ga0209726_10000462	All Organisms → cellular organisms → Bacteria	76417	Open in IMG/M
3300027862\|Ga0209701_10371351	All Organisms → cellular organisms → Bacteria → PVC group	804	Open in IMG/M
3300027903\|Ga0209488_10710956	All Organisms → cellular organisms → Bacteria → Proteobacteria	719	Open in IMG/M
3300028536\|Ga0137415_10608539	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	904	Open in IMG/M
3300030991\|Ga0073994_12172734	All Organisms → cellular organisms → Bacteria	1566	Open in IMG/M
3300031456\|Ga0307513_10847901	All Organisms → cellular organisms → Bacteria → PVC group	620	Open in IMG/M
3300032180\|Ga0307471_100036158	All Organisms → cellular organisms → Bacteria → Acidobacteria	3887	Open in IMG/M
3300032205\|Ga0307472_100302843	All Organisms → cellular organisms → Bacteria → Acidobacteria	1285	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.05%
Host-Associated	Host-Associated	13.95%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.17%
Plants	Host-Associated → Plants	13.95%
Aquatic	Environmental → Aquatic	3.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.62%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.53%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.65%
Sediment	Environmental → Aquatic → Sediment	2.33%
Freshwater	Environmental → Aquatic → Freshwater	1.55%
Cave	Environmental → Terrestrial → Cave	0.78%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.78%
Roots	Host-Associated → Plants → Roots	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	74.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.98%
Loam	Environmental → Terrestrial → Soil → Loam	6.20%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.10%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.33%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.55%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.55%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.78%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.78%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.78%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	35.66%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	33.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.98%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.10%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.10%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.10%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.33%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	1.55%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.55%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.55%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.55%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.78%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.78%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	24.81%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	20.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	8.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.20%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.65%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	3.10%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.10%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.10%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.33%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.33%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	1.55%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.55%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.55%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.55%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.55%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.55%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.78%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.78%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.78%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.78%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.78%
Quercus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Quercus Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.78%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000531	Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - CNB_Illumina_Assembled	Host-Associated	Open in IMG/M
3300000574	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m	Environmental	Open in IMG/M
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300011196	Arctic soil microbial communities form glacier forefield, Midre Lovenbreen, Svalbard, Norway (Sample 17 - S13.2.60.2.a - transect 2, repeat 2, age 113 years, surface depth)	Environmental	Open in IMG/M
3300011437	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT736_2	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012668	Arctic soils microbial communities. Combined Assembly of 23 SPs	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013770	Permafrost microbial communities from Nunavut, Canada - A15_5cm_18M	Environmental	Open in IMG/M
3300015069	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G4C, Ice margin, adjacent to proglacial lake	Environmental	Open in IMG/M
3300015197	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G6B, Proglacial plain, adjacent to northern proglacial tributary)	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300019360	White microbial mat communities from a lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - GBC170108-1 metaG	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300019883	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2	Environmental	Open in IMG/M
3300019885	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2	Environmental	Open in IMG/M
3300020010	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s2	Environmental	Open in IMG/M
3300024317	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK01	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027591	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027815	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031456	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM	Host-Associated	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
CNBas_10131561	3300000531	Quercus Rhizosphere	MKEISIKIDDDLYRRASRKFDDLEAEVNQRVTEYLESVNGDEDDVVAAKAHMVELFNQTTNFSVGVRPSREEMHARRIRQVN*
JGI1357J11328_100175772	3300000574	Groundwater	MKEISIKIDDELYRRASRKVGDLEAEVNQHVTEYLEGINGDDDGILAARDHMADLFQATSNFGVGVRPSREEMHERGSILN*
JGI25385J37094_101553311	3300002558	Grasslands Soil	MKEISIKIDDDLYRRASRAVEDLEAEVNQNVTQYLESINGDDDGIRAARAHMAELFQATRNFGVGLRPSREEMHERGSIH*
JGI25382J43887_102132162	3300002908	Grasslands Soil	MKEISIKIDDDLYRRASRAVEDLQAEVNQNVTQYLESINGDDDGIRAARAHMAELFQATRNFGVGLRPSREEMHERGSIH*
Ga0062595_1006485112	3300004479	Soil	MKEISIKIDDDLYRRASRKIEDLEGDVNQRVTEYLESVNGDDDNIVAARSRMAELFKQPTNFTVGIRPTREQMHER*
Ga0066672_100333334	3300005167	Soil	MKEISIKIDDDLYRRASRAVEDLEAEVNQHVTQYLEFINGDDDGIRAARAHMAELFQGTKNFGVGLRPSREEMHERRSVH*
Ga0066672_104759522	3300005167	Soil	VLYRLTFSEIQSYLERMKEISIKIDDELYRRASRAVEDLEAEVNQHVTQYLESINGDDDGICAARAHMAELFQATKNFGVGV
Ga0066677_101053313	3300005171	Soil	MKEISIKIDDDLYRRASRAVEDLEADVNQHVTQHLEFINGDDDGIRAARAHMAELFQGTKNFGVGLRPSREEMHERRSVH*
Ga0066673_102730151	3300005175	Soil	DELYRRPSRKVGDLETEVNQRVTEYLEALNGDDDAVLAARTHMAELFNVTSNFGVGARPSREEMHERGSIH*
Ga0066679_101854612	3300005176	Soil	MKEISIKIDDELYRRASRAVEDLEAEINQHVNEYLESINGDDDGICAARAHMAELFQAIQNFGVGVRPSREEMHERGNIH*
Ga0066688_103757201	3300005178	Soil	MKEISIKIDDELYRRACQKVSNLEAKVNQRVAEYLQAMNGDEDRIIAGRTRMTELFAQTKNFTVGVRPTREEMHER*
Ga0066684_106515992	3300005179	Soil	MKEISIKIDDDLYRRASRAVEDLEAEVNQHVTQYLEFINGDDDGIRAARAHMAELFQGTKNFGVGLRPSCEEMHERGSVH*
Ga0066685_103234181	3300005180	Soil	MKEISIKIDDDLYRRASRAVEDLEAEVNQHVTQYLESINGDDDGIRAARVHMAELFRDTRNFGVGVRPS
Ga0066678_105763152	3300005181	Soil	MKEISIKIDDDLYRRASRAVEDLEAEVNQHVTQYLESINGDDDGIRAARVHMAELFRETRNFGVGLRPTREEMHERGNIY
Ga0066678_105774992	3300005181	Soil	KIDDELYRRACQKVSNLEAKVNQRVAEYLQAMNGDEDRIIAGRTRMTELFAQTKNFTVGVRPTREEMHDRGKTS*
Ga0066675_102479782	3300005187	Soil	MKEISIKIDDDLYRRASRAVEDLEAEVNQHVTQYLEFINGDDDGIRAARAHMAELFQGTKNFGVGLRPSREEMHERGSIH*
Ga0066675_110592941	3300005187	Soil	MKEISIRIDDELYRRASQKVSNLEGEVNQRVNEYLESVNGDDDVVAARARMADLFAATKTFGVGARPSREEMHERS*
Ga0070670_1000046873	3300005331	Switchgrass Rhizosphere	MKEISIKIDDELYRRASRKVADLEAEVNQHVTEYLEALNGDADDVSEARTHMAELFGATRNFGVGVRPLREEMHERGSIH*
Ga0066682_100987022	3300005450	Soil	MKEISIKIDDELYRRASRAVEDLEAEVNQHVTQYLEFINGDDDGIRAARAHMAELFQGTKNFGVGLRPSREEMHERGSVH*
Ga0070678_1020859671	3300005456	Miscanthus Rhizosphere	MKEISIKIDDELYRRASQKVRDLEAEVNQHVTEYLEALNGKDEAILSARTQMARLFSVTKDFGVGVRPTREEMHERGSIH*
Ga0070698_10000006348	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MKEISIKIDDDLYHRASGKVDDLEAEVNQHVTEYLESINGDDDGIVAARAHMADLFRATSNFGVGVRPSREEMHERGSIH*
Ga0070704_1021856461	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	RFRLLTCARIQSYFAYMKEISIKVEDELYHRAARKVADLEAEVNQHVTEYLEALNGDDETLLAAKTHMEELFKATKNFGVGLRPTREEMHERGSIH*
Ga0066661_101018781	3300005554	Soil	LIFYVYCSYLEYMKEISIKIDDELYRRASRAVEDLEAEINQHVNEYLESINGDDDGICAARAHMAELFQAIQNFGVGVRPSREEMHERGN
Ga0066707_102762002	3300005556	Soil	LEAYQLIFYVYCSYLEYLKEISIKIDDELYRRASRAVEDLEAEINQHVNEYLESINGDDDGICAARAHMAELFQAIQNFGVGVRPSREEMHERGNIH*
Ga0066700_104409522	3300005559	Soil	MKEISIKIDDELYRRASRAVEDLEAEVNQHVTEYLESINGDDDGICAARAHMAELFQATKNFGVGVRPSREEMHERRSIH*
Ga0066699_104236922	3300005561	Soil	DLYRRASRAVEDLEAEVNQHVTQHLEFINGDDDGIRAARAHMAELFQGTKNFGVGLRPSREEMHERRSVH*
Ga0066705_100025352	3300005569	Soil	MKEISIKIDDDLYRRASRAVEDLEAEVNQHVTQHLEFINGDDDGIRAARAHMAELFQGTKNFGVGLRPSREEMHERRSVH*
Ga0066708_105537282	3300005576	Soil	MKEISIKIDDDLYRRASRAVEDLEAEVNQHVTQYLEFINGDDDGIRAARAHMAELFQGTKNFGVGLRPSREEMHERGSVH*
Ga0066691_108105841	3300005586	Soil	MKEISIKIDDELYRRASQKVADLEADVNQRVTEYLESVNGGDDVVAARTRMAGLFAATKNFSVGVR
Ga0068860_1000490712	3300005843	Switchgrass Rhizosphere	MKEISIRIDDELYRRASQKVSDLDSEVNQRVTEYLQAMNDDEDAVIAARARMVKLFAQTKNFTVGVSPTREEMHDH*
Ga0066696_101294201	3300006032	Soil	VKEISIKIDDELYRRASQKIANLEGEVNQRVAEYRESVNGEDGIVAARARIADLFAATKNFAVGIRPSREEMHERSKAP*
Ga0066656_105102972	3300006034	Soil	MKEISIKIDDDLYRRASRAVEDLEAEVNQHVTQYLESINGDDDGIRAARVHMAELFRDTRNFGVGVRPSREEMHERGNIH*
Ga0070716_10000000313	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MKEISIKIDDELYRRASLKVTDLETDVNQRVTEYLEAINGDDDAILDARTRMADLFGATRNFGVGVRPTREEMHERGSIG*
Ga0066658_102282702	3300006794	Soil	MSGALTHEKASRYLESMKEISIKIDDELYRRASRAVEDLEAEVNQHVTEYLESINGDDDGICDARAHMAELFQATKNFGVGVRPSREGMHERGSIH*
Ga0066659_104931832	3300006797	Soil	MKEISIKIDDELYRRASRAVEDLEAEVNQHVTQYLESINGDDDGICAARAHMAELFQATKNFGVGVRPSREEMHERGSIH*
Ga0066660_105427692	3300006800	Soil	MKEISIRIDDELYQRASQKISNIEADVNRQVNQYLESVNGEDDIVAARTRMAYLFAATKNFTVGIRPSREEMHDRSKAP*
Ga0075425_1012979541	3300006854	Populus Rhizosphere	RYLKSMKEISIKIDDELYRRASLKVTDLETDVNQRVTEYLEAINGDDDAILDARTRMADLFGATRNFGVGVRPTREEMHER*
Ga0075434_1015002111	3300006871	Populus Rhizosphere	MKEISIKIDDELYRRASQRVSNLEGEVNQRVTQYLESVNGDDNVIAARVHMAELFAATKNFGVGIRPSREEMHER*
Ga0079217_114439571	3300006876	Agricultural Soil	MKEISIKIDDELYRRASRKVGNLEAEVNQHVNEYLEALNGDDDAIIDARTHMADLFSATRNFGVGLRPTREEMHERGSIH*
Ga0068865_1000520634	3300006881	Miscanthus Rhizosphere	MKEISIKIDDDLYRRVARKIRDIEAEVNERVTEYLESVNGDEDIVAARTRMAKLFEATKDFGVGVRPSREEMHGH*
Ga0066710_1033664381	3300009012	Grasslands Soil	MKEISIKIDDELYRRASRAVEDLEAEVNQHVTQYLESINGDDDGIRAARVHMAELFRDTRNFGVGVRPSREEMHERGNIH
Ga0099830_101682461	3300009088	Vadose Zone Soil	MKEISIKIDDELYRRASRRVMDLEAEVNQRVTEYLEAINGDDDGILAARAHMADLFQAAGNFGVGVRPSREEMHERGSIH*
Ga0111539_100588261	3300009094	Populus Rhizosphere	MITKDNACDRMKEISIKIDDELYRRASQKGSNLEGEVNQHVAEYLQAMNGDEDRIVAARTRIGELFNQTTNFSVGVRPTREEMHER*
Ga0066709_1011949812	3300009137	Grasslands Soil	MKEISIKIDDELYRRASRVVEDLEAEVNQHVNEYLESLNGDEDGIRAARVHMAELFRETRNFGVGLRPTREEMHERGNVY*
Ga0066709_1038986962	3300009137	Grasslands Soil	MKEISIKIDDDLYRRASRAVEDLEAEVNQHVTQYLEFINGDDDGIGAARAHMAELFRGTRNLGVGLRPWREEMH
Ga0105243_105257732	3300009148	Miscanthus Rhizosphere	MKEISIKIDDELYRRAARKVADLEAEVNQHVTDYLEALDGDDEAIRDARSQMADLFKATRNFGVGVRASREDMHERASVH*
Ga0105243_129592882	3300009148	Miscanthus Rhizosphere	IDDELYRRASRKVADLEAEVNQHVTEYLEALNGDADDVSEARTHMAELFGATRNFGVGVRPLREEMHERGSIH*
Ga0111538_122219761	3300009156	Populus Rhizosphere	MITKDNACDRMKEISIKIDDELYRRASQKGSNLGGEVNQHVAEYLQAMNGDEDRIVAARTRIGELFNQTTNFSVGVRPTREEMHER*
Ga0134082_101479522	3300010303	Grasslands Soil	MKEISIKIDDDLYRRASRAVEDLEAEVNQHVTQYLEFINGDDDGICAARAHMAELFQGTKNFGVGLRPSREEMHERGSVH*
Ga0134126_1000062126	3300010396	Terrestrial Soil	MTMKELSIKIEDDLYRRASQKVSNLEGEVNQRVNEYLESINGEDDIVAARTRMVELFATTKNFSVGVRPSREEMHER*
Ga0134126_100276744	3300010396	Terrestrial Soil	MKEISIKIDDELYRRATRKVTDLEADVSQHVTEYLETLDGADDDAIVAARTHMAELFNLTRNFGVGVRPTREEMHERGSIH*
Ga0134124_100098483	3300010397	Terrestrial Soil	MKEISIKIDDDLYRRVARKIRDIEAEVNERVTEYLESVNGDEDIVAARTRMAELFEATKNFGVGVRPSREEMHGH*
Ga0134122_115588981	3300010400	Terrestrial Soil	QGYLKYMKEISIKIEDELYRQASSKIADLEAEISQHVAEYLETINRDDDALLAARTHMAKLFRATRNFGVGVKPSREEMHEPRNLR*
Ga0134121_100042087	3300010401	Terrestrial Soil	MKEISIKIDDELYSRASRKVADLEAVVNQHVTEYLESINGEEDAVRAARTHMADLFNSTRNFSVGVRPSREEMHERGRFH*
Ga0134121_101305663	3300010401	Terrestrial Soil	MKEISIKIDDDLYRRAARKIRDIEAEVNERVTEYLESVNGDEDIVAARTRMAKLFEATKDFGVGVRPSREEMHGH*
Ga0138514_1001240852	3300011003	Soil	DELYRRALRKVENLEAEVNQHVTEYLGALNGYDEAIVDARTQMSGLFNATRNFGVGVRPPREEMHEGESMSKP*
Ga0137482_1000315	3300011196	Glacier Forefield Soil	MKEISIKIDDDLYRRASQKVSNLEAEVNQRVTEYLESVNGDADDVVATRARMAELFASTTNFGVGVRSSREEMHDR*
Ga0137429_12406552	3300011437	Soil	MKEISIKIDDDLYRRASQKIEDLEGEVNQRVTEYLESVNGDDNIVAARARMVELFSQTTNFRVGVRPTREQMHDR*
Ga0137389_105033462	3300012096	Vadose Zone Soil	MKEISIKIDDELYRRASRKVENLEAEVNQRVTEYLESVNGDDDDIVAAARARMADLFAATKNFGVGVRPSREEMHER*
Ga0137364_103257132	3300012198	Vadose Zone Soil	MKEISIKIDDDLYRRASRAVEDLEAEVNQHVTQYLEFINGDDDGIRAARAHMAELFQATRNFGVGLRPSREEMHERGSIH*
Ga0137399_105472192	3300012203	Vadose Zone Soil	MKEISIKIDDDLYRGASRKVGDLEAEVNKHVIEYLESLNGDDDVISAARTHMAELFNATRNFGVGLKPTREEMHERGSIH*
Ga0137362_100193783	3300012205	Vadose Zone Soil	VLYRLTFSELQSYLERMKEISIKIDDDLYRRASRAVENLEAEVNQHVTQYLESINGDDDGIRAARAHMAELFRSTKNFGVGVRPTREEMHERGSIH*
Ga0137376_100963233	3300012208	Vadose Zone Soil	MKEISIKIDDELYRRASQKVEDLETEVNQYVTECLEAINGDDDAIFDARTHMSELFNSTRNFGVGVRPSREEMHER*
Ga0137378_103959692	3300012210	Vadose Zone Soil	LTSFGFQGYLKFTKEISIKIDDKLYGRASRAVEDLEAEVNQHVIEYLESINGDDDGICAARAHMAELFRGTRNFGVGLRPSREEMHERGSIH*
Ga0137378_104883472	3300012210	Vadose Zone Soil	MKEISIKIDDELYRRAAQKVSNLEGEATQRVTEYLESVNGDDEKIIAARTRMAKLFSQTQNFSVGLRP
Ga0137387_100692253	3300012349	Vadose Zone Soil	MKEISIKIDDELYRRASRKVEDLEAEVNQHVTEYLEAINGDDDGILAARAHMADLFQATSNFGVGVRPSREEMHERGSIH*
Ga0137385_104803152	3300012359	Vadose Zone Soil	MKEISIKIDDELYRRASGKVDDLEGEVNQHVTEYLESINGDDDGILAARDHMADLFRTTTNFGVGVRPSREEMHERGSIHQ*
Ga0137360_111004761	3300012361	Vadose Zone Soil	MKEISIKIDDELYRRASGKIEDLEAEVNQHVIEYLEAINGDDDGILAARAHMADLFQATTNFGVGLRATREEMHERGSIH*
Ga0137361_100088627	3300012362	Vadose Zone Soil	VLYRLTFSELQSYLERMKEISIKIDDDLYRRASRAVENLEAEVNQHVTQYLESINGDDDGIRAARAHMAELFRGTKNFGVGVRPTREEMHERGSIH*
Ga0137358_107344221	3300012582	Vadose Zone Soil	MKEISIKIDHELYRRASRKVGDLEAEVNQHVTKYLEAINGNDDSILDSRAHMADLFRATKNFGVGVRPSREEMHERGSIH*
Ga0157216_105051882	3300012668	Glacier Forefield Soil	MKEISIKIDDDLYRRASQKVSNLEGEVNQRVTEYLESVNGDEDITAARARMAELFAATNNFGIGLRPSREEMHER*
Ga0137397_101992643	3300012685	Vadose Zone Soil	MKEISIKIDDELYRRASGKVEDLEAINGDDDGIMAARDHMADLFQATTNFGVGVGPSREEMQERGRIHLTKPGH*
Ga0137396_102150042	3300012918	Vadose Zone Soil	MMGLTKAQFQSYLEFMKEISIKIDDELYRRASRKVGDLEAEVNQHVNKYLEALDGDDDGVLAARTHLVDLFKATKNFGVGVRPTREEMHERGSIH*
Ga0137359_101278832	3300012923	Vadose Zone Soil	MKEIYIKIDDELYRRPSRKVENLEAEVSQHVTEYLEGINGDDEGILAARANMASLLIATSNFGVGIRPSREEMHERGSILKLSQV*
Ga0137359_109857762	3300012923	Vadose Zone Soil	RVMKEISIKIDDDLYRRASRKVENLEAEVSQHVTEYLESIHSDEDAVRAARAQMADLFNATRNFGLGVRPSREEMHERGRIH*
Ga0137419_101272664	3300012925	Vadose Zone Soil	MKEISIEIDEELYRRASGKVNDLEAEVNQHVTEYLESINGDDDGILAARAHMADLFQATSNFGVGVRPSREEMHERGSALN*
Ga0137419_114422361	3300012925	Vadose Zone Soil	LTWAEFQSYLEYMKEMSIKIDDELYRRASRKVADLETEVNQHVTEYLEGLNGDDDGVFDARTHMAELFNATRNFGVGLKPTREEMHERGSIH*
Ga0137416_111880082	3300012927	Vadose Zone Soil	MKEISIKIDDELYRRASQKVSNLEGEVNQRVTEYLESVNGDDHDIVAARARMVDLFDVTKNFGVGIRPTREEMHER*
Ga0137416_115823292	3300012927	Vadose Zone Soil	IKIDDELYRRASRKVADLETEVNQHVTEYLEGLNGDDDGVFDARTHMAELFDSTRNFGLGVRPSRDEMHESGSIH*
Ga0137404_100026653	3300012929	Vadose Zone Soil	MKEISIKIDDELYRRASRKVADLEAEVNHHVTEYLEGINGDDDAFLDARTRMADLFNAARNFGVGVRPSRAEMHERRSILN*
Ga0137407_121651311	3300012930	Vadose Zone Soil	IDDELYNRASQKVFNLEGEVNQRVTEYLESVNGDDHGIVAARTRMADLFGATKNFAVGIRPTREEMHER*
Ga0157378_103629962	3300013297	Miscanthus Rhizosphere	MKEISIKIDDDLYRRVARKIRDIEAEVNERVTEYLESVNGDEDIVAARTRMAKLFEATKDFGVEVRPSREEMHGH*
Ga0120123_10381971	3300013770	Permafrost	MKEIAIKIDDELYRRASRKVGDLEAEVNQHVTEYLESLNGDDDAIFAARTHMADLFNATRNFGVGLKPTREEMHERWRI
Ga0167633_1244072	3300015069	Glacier Forefield Soil	TSLGFQSYFLTMKKLSIKIDDDLYRRASGKVDDLEAEVNQHVTECLESINGDDDGILAAPTHMADLFQATRNFGVGVRLSREEMH*
Ga0167638_10048332	3300015197	Glacier Forefield Soil	MKEISIKIDDELYHRASRKVEDLESEVTQHVNEYLETLDGDDDSILAARTHMADLFNATSNFGVGVRPSREEMHERGSIH*
Ga0184608_104348872	3300018028	Groundwater Sediment	MKEISIKIDDELYRRAARKVADLEAEVNQHVTEYLETLDGDDDDAIVAARTHMAELFNLTRNFGVGVRPTREEMHERGSIH
Ga0184623_102193312	3300018056	Groundwater Sediment	MKEISIKIDDELYRRASRKVGDLEAEVNQHVTEYLEALNGDDDAILNARTHMADLFNATRNFGVGVRPTREEMHERGSIH
Ga0190270_101796053	3300018469	Soil	MKEISIKIDDELYRRASRKVGDLEAEVNQHVTAYLESLDGDDDAILDARTHMAELFNATRNFGVGVRP
Ga0190270_113373902	3300018469	Soil	VKEISIKIDDELYRRASQKVADLEAEVNQHVTEYLEALNGDDEAIVSARTQMARLFCLTKNFGVGVRPTREEMHERGSIH
Ga0190274_100026746	3300018476	Soil	MKEISIKIDDELYRRASRKVGDLESEVNQHVTEYLESLDGDDDVLLSARTHMAKLFNATKNFGVGERPSREEMHERGSIH
Ga0066669_101914002	3300018482	Grasslands Soil	MKEISIKIDDDLYRRASRAVEDLEAEVNQHVTQYLEFINGDDDGIRAARAHMAELFQGTKNFGVGLRPSCEEMHERGSVH
Ga0066669_114598242	3300018482	Grasslands Soil	MKEISIKIDDELYRRPSRKVGDLETEVNQRVTEYLEALNGDDDAVLAARTHMAELFNVTSNFGVGARPSREEMHERGSIH
Ga0190273_112713912	3300018920	Soil	MKEISIKIDDELYRRASRKVGDLEAEVNQHVTEYLEALNGDDEATRDARSHMADLFKATRNFGVGIKPSREEMHERGSIH
Ga0187894_104541242	3300019360	Microbial Mat On Rocks	MKEFTIRIDDEIYRRASRKVGDLESDINQHVTEYLQALSGDDDAILAARARMADLFKVIRNFGVGVRATREEMHERGSIH
Ga0137408_14339613	3300019789	Vadose Zone Soil	MKAISIKIDDDLYRRASQKFSNLEDEVSQRVNKYLESVNGEDDILVARTRMTDLFAATKNFGVGVGPSREETHER
Ga0193725_10091664	3300019883	Soil	MKEISIKIDDDLYRRASQKVDDLEAEVNQHVTEYLEALNGDDDAILGARTHMADLFQSTSNFGVGVRPSREEMHERGSIH
Ga0193747_10105633	3300019885	Soil	MKEISIKIDDDLYRRASRAVEDLEAEVNQHVTEYLESMNGDDNGIRAARARMAELFRGTRNFGVGVMPTREEMHERGNIH
Ga0193747_10317153	3300019885	Soil	MKEISLKIDDELYRSASRKVADLEAEVHQHVTEYLETINDEAIVDARAHMADLFGATRNFGVGVRPSRDEMHEGGTHA
Ga0193749_10002802	3300020010	Soil	MKEISIKIDDELYRRASRKVADLEADVNQHVTEYLESINGDEDAVRAARTHMADLFNSAKNFSVGVRPSREEMHERGRIH
Ga0247660_10005205	3300024317	Soil	MKEISIKIDDDLYRRASRKIEDLEGDVNQRVTEYLESVNGDDDNIVAARSRMAELFKQPTNFTVGIRPTREQMHER
Ga0207681_100055304	3300025923	Switchgrass Rhizosphere	MKEISIKIDDELYRRASRKVADLEAEVNQHVTEYLEALNGDADDVSEARTHMAELFGATRNFGVGVRPLREEMHERGSIH
Ga0207709_103426372	3300025935	Miscanthus Rhizosphere	MKEISIKIDDELYRRAARKVADLEAEVNQHVTDYLEALDGDDEAIRDARSQMADLFKATRNFGVGVRASREDMHERASVH
Ga0207704_101443262	3300025938	Miscanthus Rhizosphere	LTRGNKCSYLEPMKEISIKIDDDLYRRVARKIRDIEAEVNERVTEYLESVNGDEDIVAARTRMAKLFEATKDFGVGVRPSREEMHGH
Ga0207665_10000003104	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MKEISIKIDDELYRRASLKVTDLETDVNQRVTEYLEAINGDDDAILDARTRMADLFGATRNFGVGVRPTREEMHERGSIG
Ga0207711_103067802	3300025941	Switchgrass Rhizosphere	MKEISIRIDDELYRRASQKVSDLDSEVNQRVTEYLQAMNDDEDAVIAARARMVKLFAQTKNFTVGVSPTREEMHDH
Ga0207689_103701721	3300025942	Miscanthus Rhizosphere	MKEISIKIDDELYRRASRKVADLEAEVNQHVTEYLEALNGDADDVSEARTHMAELFGATRNFGVGVRPLREEMHERGSI
Ga0209234_10931552	3300026295	Grasslands Soil	MKEICIKIDDELYRRASQKVANLEGEVNQRVTEYLESVNGDDHGIVAARARMVDLFDVTKNFGVGIRPTREEMHER
Ga0209235_11794641	3300026296	Grasslands Soil	MKEISIKIDDELYRRASRVVEDLEAEVNQHVNEYLESLNGDEDGIRAARVHMAELFRETRNFGVGLRPTREEMHERGNVY
Ga0209236_10383513	3300026298	Grasslands Soil	MKEISIKIDDDLYRRASRAVEDLEAEVNQNVTQYLESINGDDDGIRAARAHMAELFQATRNFGVGLRPSREEMHERGSIH
Ga0209265_10780741	3300026308	Soil	MKEISIKIDDDLYRRASRAVEDLEAEVNQHVTQYLEFINGDDDGIRAARAHMAELFQGTKNFGVGLRPSREEMHERGSIH
Ga0209761_11649652	3300026313	Grasslands Soil	MKEISIKIDDELYRRASRVVEDLEAEVNQHVNEYLESLNGDEDGIRAARVHMAELFRETRNFGVGLRPTREEMHERGNIY
Ga0209154_11108312	3300026317	Soil	MKEISIKIDDDLYRRASRAVEDLEAEVNQHVTQYLEFINGDDDGIRAARAHMAELFQGTKNFGVGLRPSREEMHERRSVH
Ga0209154_13203181	3300026317	Soil	MKEISIKVDDDLYRRASRAVEDLEAEVNQHVTEYLESINGDDDGICAARAHMAELFQATKNFGVGVRPSREEMHERGSIH
Ga0209152_102546731	3300026325	Soil	MSGALTHEKASRYLESMKEISIKIDDELYRRASRAVEDLEAEVNQHVTEYLESINGDDDGICDARAHMAELFQATKNFGVGVRPSREGMHERGSIH
Ga0209804_11670351	3300026335	Soil	MKEISIKIDDDLYRRASRAVEDLEADVNQHVTQHLEFINGDDDGIRAARAHMAELFQGTKNFGVGLRPSREEMHERRSVH
Ga0209808_12111001	3300026523	Soil	MKEISIKIDDDLYRRASRAVEDLEAEVNQHVTQYLEFINGDDDGIRAARAHMAELFQGTKNFGVGLRPSREEMHERGSVH
Ga0209161_103040172	3300026548	Soil	MKEISIKIDDDLYRRASRAVEDLEAEVNQHVTQHLEFINGDDDGIRAARAHMAELFQGTKNFGVGLGASREEMHERRSVH
Ga0209474_100229715	3300026550	Soil	VKEISIKIDDELYRRASQKIANLEGEVNQRVAEYRESVNGEDGIVAARARIADLFAATKNFAVGIRPSREEMHERSKAP
Ga0209474_101764582	3300026550	Soil	MKEISIKIDDDLYRRASRAVEDLEAEVNQHVTQHLEFINGDDDGIRAARAHMAELFQGTKNFGVGLRPSREEMHERRSVH
Ga0209733_10066212	3300027591	Forest Soil	MKEISIKIDDELYRRASRKVGDLEAEVSQHVTEYLEGINGDDEGILAARVHIADLFNATSNFGVGVRPSREEMHERGSMLN
Ga0209118_11396072	3300027674	Forest Soil	MKEISIKIDDELYRRASRKVADLETEVHQHVTEYLEGLNGDDDAIFDARTHMANLFNATRNFGVGVRPRREEMHERESIH
Ga0209726_1000046242	3300027815	Groundwater	MKEISIKIDDELYRRASRKVGDLEAEVNQHVTEYLEGINGDDDGILAARDHMADLFQATSNFGVGVRPSREEMHERGSILN
Ga0209701_103713512	3300027862	Vadose Zone Soil	MKEISIKIDDELYRRASRRVMDLEAEVNQRVTEYLEAINGDDDGILAARAHMADLFQATGNFGVGVRPSREEMHERGSIH
Ga0209488_107109561	3300027903	Vadose Zone Soil	MKEISIKIDDDLYRRASRKVENLEAEVSQHVTEYLESINGDEDTVRAARAKMADLFNATRNFGLGVRPSREEMHERGRIH
Ga0137415_106085391	3300028536	Vadose Zone Soil	MSIKIDDELYRRASRKVADLETEVNQHVTEYLEGLNGDDDGVFDARTHMAELFDSTRNFGLGVRPSRDEMHESGSIH
Ga0073994_121727342	3300030991	Soil	MKEILIKIDDDLYRRSSRMVENLETEVKQHVTEYLESIKGDDDGILAVRTHMADLFRATTNFGVGVRSSREDMHERGSIR
Ga0307513_108479011	3300031456	Ectomycorrhiza	MKEISIKIEDELYRQASSKIADLEAEIGQHVAEYLETINRDDDALLAARTRMATLFGATRNFGVGVRPSREEMHEPRNLR
Ga0307471_1000361584	3300032180	Hardwood Forest Soil	MKEISIKIDDDLYRRASRKIDDLEAEVNQRVTEYLKLVNGDDDIVAARGRMAQLFAATKNFGVGIRPSREEMHERKKTC
Ga0307472_1003028432	3300032205	Hardwood Forest Soil	MKEISIKIDDDLYRRASRKIEDLEGKVNQRVAEYLESVNGGDDNIVAARARMAELFSQTTNFSVGLRPSREEMCERGKVDRLRR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F064034

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences