Metagenome / Metatranscriptome Family F064007

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F064007
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	73 residues
Representative Sequence	VTQQKIIAVRHLRAGGRLIPVHFSRNAGGSVAGRAVLGAQDTPILDGPDPEAVLAVLRDVIDGLLLARRSA
Number of Associated Samples	104
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	37.50 %
% of genes near scaffold ends (potentially truncated)	31.78 %
% of genes from short scaffolds (< 2000 bps)	70.54 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.72

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (98.450 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (32.558 % of family members)
Environment Ontology (ENVO)	Unclassified (36.434 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.287 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 21.21% β-sheet: 29.29% Coil/Unstructured: 49.49%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.72
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.72
Powered by PDBe Molstar

SCOP family	SCOP domain	Representative PDB	TM-score
d.204.1.0: automated matches	d4fyla1	4fyl	0.71975
d.204.1.1: Ribosome binding protein Y (YfiA homologue)	d3v2cy_	3v2c	0.71259
e.3.1.0: automated matches	d6xqya1	6xqy	0.71172
e.3.1.0: automated matches	d6i1ha1	6i1h	0.70558
d.204.1.1: Ribosome binding protein Y (YfiA homologue)	d2ywqa1	2ywq	0.70364

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF09335	SNARE_assoc	35.66
PF04055	Radical_SAM	19.38
PF01979	Amidohydro_1	3.10
PF13353	Fer4_12	1.55
PF02518	HATPase_c	1.55
PF14870	PSII_BNR	0.78
PF05833	NFACT_N	0.78
PF00149	Metallophos	0.78
PF13394	Fer4_14	0.78
PF03692	CxxCxxCC	0.78
PF00457	Glyco_hydro_11	0.78
PF13147	Obsolete Pfam Family	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	35.66
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	35.66
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	35.66
COG1293	Ribosome quality control (RQC) protein RqcH, Rqc2/NEMF/Tae2 family, contains fibronectin-(FbpA) and RNA- (NFACT) binding domains	Translation, ribosomal structure and biogenesis [J]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.45 %
Unclassified	root	N/A	1.55 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.45 %
Unclassified	root	N/A	1.55 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.45 %
Unclassified	root	N/A	1.55 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	34.88 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3.88 %
Unclassified	root	N/A	1.55 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	27.91 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3.88 %
Unclassified	root	N/A	1.55 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	27.91 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	3.88 %
Unclassified	root	N/A	1.55 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	9.30 %
Chloroflexi bacterium 13_1_40CM_2_68_14	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium 13_1_40CM_2_68_14	3.88 %
Unclassified	root	N/A	1.55 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.78 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	9.30 %
Chloroflexi bacterium 13_1_40CM_2_68_14	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium 13_1_40CM_2_68_14	3.88 %
Unclassified	root	N/A	1.55 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.78 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002568\|C688J35102_118476596	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300005167\|Ga0066672_10005131	All Organisms → cellular organisms → Bacteria	5728	Open in IMG/M
3300005175\|Ga0066673_10104196	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1527	Open in IMG/M
3300005176\|Ga0066679_10094561	All Organisms → cellular organisms → Bacteria → Proteobacteria	1807	Open in IMG/M
3300005176\|Ga0066679_10634276	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	697	Open in IMG/M
3300005177\|Ga0066690_10005658	All Organisms → cellular organisms → Bacteria → Proteobacteria	5853	Open in IMG/M
3300005179\|Ga0066684_10457024	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	858	Open in IMG/M
3300005180\|Ga0066685_10861545	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	609	Open in IMG/M
3300005181\|Ga0066678_10058495	All Organisms → cellular organisms → Bacteria	2218	Open in IMG/M
3300005187\|Ga0066675_11320110	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300005435\|Ga0070714_101509406	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	656	Open in IMG/M
3300005445\|Ga0070708_100268622	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1604	Open in IMG/M
3300005458\|Ga0070681_10047338	All Organisms → cellular organisms → Bacteria	4299	Open in IMG/M
3300005467\|Ga0070706_100049265	All Organisms → cellular organisms → Bacteria	3888	Open in IMG/M
3300005467\|Ga0070706_101710020	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300005529\|Ga0070741_10012616	All Organisms → cellular organisms → Bacteria → Proteobacteria	15216	Open in IMG/M
3300005540\|Ga0066697_10372141	All Organisms → cellular organisms → Bacteria	831	Open in IMG/M
3300005552\|Ga0066701_10468917	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300005555\|Ga0066692_10214467	All Organisms → cellular organisms → Bacteria	1208	Open in IMG/M
3300005559\|Ga0066700_10068279	All Organisms → cellular organisms → Bacteria → Proteobacteria	2246	Open in IMG/M
3300005559\|Ga0066700_10168823	All Organisms → cellular organisms → Bacteria	1495	Open in IMG/M
3300005566\|Ga0066693_10482814	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium 13_1_40CM_2_68_14	510	Open in IMG/M
3300005568\|Ga0066703_10391233	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	834	Open in IMG/M
3300005598\|Ga0066706_10013119	All Organisms → cellular organisms → Bacteria	4704	Open in IMG/M
3300006032\|Ga0066696_10436445	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	857	Open in IMG/M
3300006173\|Ga0070716_100678458	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	785	Open in IMG/M
3300006797\|Ga0066659_10170533	All Organisms → cellular organisms → Bacteria	1566	Open in IMG/M
3300006800\|Ga0066660_10634610	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	889	Open in IMG/M
3300006806\|Ga0079220_11819247	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300006904\|Ga0075424_100235901	All Organisms → cellular organisms → Bacteria	1944	Open in IMG/M
3300007255\|Ga0099791_10037220	All Organisms → cellular organisms → Bacteria	2152	Open in IMG/M
3300007255\|Ga0099791_10071877	All Organisms → cellular organisms → Bacteria	1569	Open in IMG/M
3300007255\|Ga0099791_10390720	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300007265\|Ga0099794_10080206	All Organisms → cellular organisms → Bacteria	1609	Open in IMG/M
3300007788\|Ga0099795_10317887	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300009012\|Ga0066710_100109493	All Organisms → cellular organisms → Bacteria	3726	Open in IMG/M
3300009012\|Ga0066710_104749021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium 13_1_40CM_2_68_14	508	Open in IMG/M
3300009038\|Ga0099829_10269892	All Organisms → cellular organisms → Bacteria	1390	Open in IMG/M
3300009038\|Ga0099829_10988656	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300009088\|Ga0099830_10341313	All Organisms → cellular organisms → Bacteria → Proteobacteria	1203	Open in IMG/M
3300009089\|Ga0099828_10124414	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2257	Open in IMG/M
3300009089\|Ga0099828_10423653	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1200	Open in IMG/M
3300009137\|Ga0066709_100013422	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	7722	Open in IMG/M
3300009137\|Ga0066709_100098173	All Organisms → cellular organisms → Bacteria	3576	Open in IMG/M
3300009792\|Ga0126374_10741035	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	744	Open in IMG/M
3300010046\|Ga0126384_10240205	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1458	Open in IMG/M
3300010304\|Ga0134088_10138969	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1153	Open in IMG/M
3300010360\|Ga0126372_12160121	Not Available	605	Open in IMG/M
3300010399\|Ga0134127_13081472	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300010401\|Ga0134121_13282807	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300010880\|Ga0126350_10905840	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300012198\|Ga0137364_10208074	All Organisms → cellular organisms → Bacteria	1436	Open in IMG/M
3300012202\|Ga0137363_10170221	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1727	Open in IMG/M
3300012202\|Ga0137363_11230611	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300012203\|Ga0137399_10099821	All Organisms → cellular organisms → Bacteria → Proteobacteria	2243	Open in IMG/M
3300012205\|Ga0137362_10050071	All Organisms → cellular organisms → Bacteria	3402	Open in IMG/M
3300012205\|Ga0137362_10056648	All Organisms → cellular organisms → Bacteria	3212	Open in IMG/M
3300012208\|Ga0137376_10374520	All Organisms → cellular organisms → Bacteria	1236	Open in IMG/M
3300012582\|Ga0137358_10136244	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1670	Open in IMG/M
3300012582\|Ga0137358_10303430	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1084	Open in IMG/M
3300012685\|Ga0137397_10004902	All Organisms → cellular organisms → Bacteria	9281	Open in IMG/M
3300012685\|Ga0137397_10009980	All Organisms → cellular organisms → Bacteria → Proteobacteria	6613	Open in IMG/M
3300012918\|Ga0137396_10176643	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1564	Open in IMG/M
3300012922\|Ga0137394_11328950	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	581	Open in IMG/M
3300012924\|Ga0137413_10516796	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	881	Open in IMG/M
3300012927\|Ga0137416_11761650	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300012930\|Ga0137407_10006166	All Organisms → cellular organisms → Bacteria → Proteobacteria	8195	Open in IMG/M
3300012930\|Ga0137407_12322715	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300012944\|Ga0137410_10602588	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	908	Open in IMG/M
3300012948\|Ga0126375_11953779	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300012977\|Ga0134087_10005563	All Organisms → cellular organisms → Bacteria	4070	Open in IMG/M
3300012977\|Ga0134087_10244972	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	819	Open in IMG/M
3300014150\|Ga0134081_10192533	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300015053\|Ga0137405_1034319	All Organisms → cellular organisms → Bacteria	2113	Open in IMG/M
3300015053\|Ga0137405_1061551	All Organisms → cellular organisms → Bacteria	1944	Open in IMG/M
3300015171\|Ga0167648_1006570	All Organisms → cellular organisms → Bacteria	2947	Open in IMG/M
3300015264\|Ga0137403_10301843	All Organisms → cellular organisms → Bacteria	1496	Open in IMG/M
3300017927\|Ga0187824_10290015	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300018027\|Ga0184605_10076370	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1456	Open in IMG/M
3300018431\|Ga0066655_10362221	All Organisms → cellular organisms → Bacteria	953	Open in IMG/M
3300018431\|Ga0066655_10372233	All Organisms → cellular organisms → Bacteria	940	Open in IMG/M
3300018433\|Ga0066667_10362140	All Organisms → cellular organisms → Bacteria	1158	Open in IMG/M
3300018433\|Ga0066667_11221839	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300018482\|Ga0066669_11273459	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300019789\|Ga0137408_1028917	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	875	Open in IMG/M
3300019789\|Ga0137408_1108648	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium 13_1_40CM_2_68_14	553	Open in IMG/M
3300019789\|Ga0137408_1205851	All Organisms → cellular organisms → Bacteria	2476	Open in IMG/M
3300019789\|Ga0137408_1282339	All Organisms → cellular organisms → Bacteria	3437	Open in IMG/M
3300020082\|Ga0206353_10169249	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	677	Open in IMG/M
3300025910\|Ga0207684_10042428	All Organisms → cellular organisms → Bacteria	3856	Open in IMG/M
3300025910\|Ga0207684_10145178	All Organisms → cellular organisms → Bacteria	2041	Open in IMG/M
3300025912\|Ga0207707_10215124	All Organisms → cellular organisms → Bacteria	1673	Open in IMG/M
3300025939\|Ga0207665_10285769	All Organisms → cellular organisms → Bacteria	1229	Open in IMG/M
3300025939\|Ga0207665_10444103	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	994	Open in IMG/M
3300026078\|Ga0207702_10334369	All Organisms → cellular organisms → Bacteria	1446	Open in IMG/M
3300026295\|Ga0209234_1026782	All Organisms → cellular organisms → Bacteria	2189	Open in IMG/M
3300026296\|Ga0209235_1001415	All Organisms → cellular organisms → Bacteria	12962	Open in IMG/M
3300026300\|Ga0209027_1131069	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	867	Open in IMG/M
3300026301\|Ga0209238_1043271	All Organisms → cellular organisms → Bacteria	1637	Open in IMG/M
3300026309\|Ga0209055_1061156	All Organisms → cellular organisms → Bacteria	1593	Open in IMG/M
3300026315\|Ga0209686_1209842	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium 13_1_40CM_2_68_14	528	Open in IMG/M
3300026319\|Ga0209647_1056637	All Organisms → cellular organisms → Bacteria	2068	Open in IMG/M
3300026325\|Ga0209152_10162649	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	842	Open in IMG/M
3300026330\|Ga0209473_1047624	All Organisms → cellular organisms → Bacteria	1880	Open in IMG/M
3300026335\|Ga0209804_1028468	All Organisms → cellular organisms → Bacteria	2849	Open in IMG/M
3300026527\|Ga0209059_1176415	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300026550\|Ga0209474_10008298	All Organisms → cellular organisms → Bacteria	8546	Open in IMG/M
3300026550\|Ga0209474_10387154	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	741	Open in IMG/M
3300026551\|Ga0209648_10070036	All Organisms → cellular organisms → Bacteria	2953	Open in IMG/M
3300027388\|Ga0208995_1075653	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	589	Open in IMG/M
3300027643\|Ga0209076_1017675	All Organisms → cellular organisms → Bacteria	1915	Open in IMG/M
3300027655\|Ga0209388_1023099	All Organisms → cellular organisms → Bacteria	1753	Open in IMG/M
3300027671\|Ga0209588_1042114	All Organisms → cellular organisms → Bacteria	1475	Open in IMG/M
3300027671\|Ga0209588_1114007	All Organisms → cellular organisms → Bacteria	867	Open in IMG/M
3300027678\|Ga0209011_1001398	All Organisms → cellular organisms → Bacteria	8755	Open in IMG/M
3300027738\|Ga0208989_10134759	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	833	Open in IMG/M
3300027748\|Ga0209689_1224982	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300027862\|Ga0209701_10566293	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300027882\|Ga0209590_10306645	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1020	Open in IMG/M
3300028536\|Ga0137415_10049886	All Organisms → cellular organisms → Bacteria → Proteobacteria	4062	Open in IMG/M
3300031720\|Ga0307469_10096843	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2058	Open in IMG/M
3300031740\|Ga0307468_100981881	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	741	Open in IMG/M
3300031820\|Ga0307473_10388710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium 13_1_40CM_2_68_14	910	Open in IMG/M
3300031962\|Ga0307479_10005282	All Organisms → cellular organisms → Bacteria	11828	Open in IMG/M
3300032205\|Ga0307472_102004246	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300032783\|Ga0335079_10170898	All Organisms → cellular organisms → Bacteria	2428	Open in IMG/M
3300032828\|Ga0335080_11346571	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300033158\|Ga0335077_11416264	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.45%
Host-Associated	Host-Associated	1.55%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.90%
Aquatic	Environmental → Aquatic	1.55%
Plants	Host-Associated → Plants	1.55%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.12%
Freshwater	Environmental → Aquatic → Freshwater	0.78%
Sediment	Environmental → Aquatic → Sediment	0.78%
Cave	Environmental → Terrestrial → Cave	0.78%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	80.62%
Loam	Environmental → Terrestrial → Soil → Loam	13.18%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.33%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.78%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.78%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	43.41%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	32.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.53%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.88%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.33%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.33%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.33%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.78%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.78%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	32.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	20.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	11.63%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.20%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.10%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.10%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.88%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.33%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.33%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.33%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.55%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.55%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.78%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.78%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.78%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.78%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.78%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.78%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.78%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015171	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-3a, vegetated patch on medial moraine)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027388	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_O2 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027678	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J35102_1184765961	3300002568	Soil	VTQPKIIAVRHLRAGGRLIPIQFFRNQGGSVAGRAVLGDHDMPIVDGPDPETVLELLRDVIDDLLLARKSA*
Ga0066672_100051311	3300005167	Soil	VTKQKIIAVRHLRAGGRVIPVHFSRNAGGSVAGRAVLGAQDTPILDGPDPEAVLAVLRDVIDGLLLARRPALASRG*
Ga0066673_101041963	3300005175	Soil	LARGLLYSPDVTQQKIIAVRHLRAGGRLIPVQFSRNAGGSVAGQAVLSDQDTPIVDGPDPEAVLAVLRDVIDGLLLARRTA*
Ga0066679_100945611	3300005176	Soil	VTHQKLIAVRHLRAGGRLIPVHFFRNDGGSVAGRFVLGAEDTPIVDGPTPDAVLAVLRDVIDGLLLARKKVA*
Ga0066679_106342762	3300005176	Soil	IVTKQKIIAVRHLRAGGRLIPVHFSRNAGGSVAGRAVLGAEDTPILDGPDPEAVLAVLRDVIDGLLLARRPA*
Ga0066690_100056587	3300005177	Soil	AVRHLRAGGRLIPVHFSRNAGGSVAGRAVLGAQDTPILDGPDPEAVLAVLRDVIDGLLLARRTA*
Ga0066684_104570241	3300005179	Soil	VTKKKIIAVRHLRAGGRLIPVHFSRNAGGSVAGRAVLGAQDTPILDGPDPEAVLAVLRDVIDGLLLARRPALASRG*
Ga0066685_108615452	3300005180	Soil	QKQKIIAVRHLRAGGRLIPVHFSRNAGGSVAGRAVLGAQDTPILDGPDPEAVLAVLRDVIDGLLLARRSA*
Ga0066678_100584953	3300005181	Soil	VDWRAGCFPERIVTQQKLIAVRHLRAGGRLIPVHFFRNDGGSVAGRFVLGAEDTPIVDGPTPEAVLAVLRDVIDGLLLARKKVA*
Ga0066675_113201102	3300005187	Soil	VTQENLIGVRHLRVGGRLVPVQLFRNAGGSVAGRFVLGAEDTPIVDGPTPEAVLELLRDVLDGLLLARKSA*
Ga0070714_1015094062	3300005435	Agricultural Soil	MAHALLCVKVVNPQKLIAVRHLRAGGRLIPVHFFRNDGGSVAGRFVLSAEDTPILDGPNPEAVLDLMRDVI
Ga0070708_1002686223	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VTQKIFAVRHLRVGERLIPVQLSRNDGGSVAGRALLSAQDTPIVDGPDAEAVLAVLRDAIDGLLLARQPA*
Ga0070681_100473382	3300005458	Corn Rhizosphere	VSGEEIIAVRHLQAGGRSITVQFFRNEGGSVAGRAVLGAEDTPIVDGPDPDAVLDVFRDVMDGLLLAREPA*
Ga0070706_1000492655	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VTRQTIIEVRHLRAGGRLIPVHFSRNAGGSVAGRAVLSPQDTPIVDGPDPETVLALLRDIIDGLLLARQSPDAAPA*
Ga0070706_1017100202	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VTKQKIIAVRHLRAGGRLIPVHFSRNAGGSVAGRAVLGAQDTPILDGPDPEAVLAVLRDVIDGLLLARRPALASRG*
Ga0070741_100126168	3300005529	Surface Soil	VTGEEIIAVRHLQAGGRSITVQFFRNEGGSVAGRAVLGAEDTPIVDGPDPDAVLDVFRDVMDGLLLARQPA*
Ga0066697_103721412	3300005540	Soil	VTQQKLIAVRHLRAGGRLIPVHFFRNDGGSVAGRFVLGAEDTPIVDGPTPEAVLAVLRDVIDGLLLARKKVA*
Ga0066701_104689172	3300005552	Soil	VTHQKLIAVRHLRAGGRVIPVHFFRNDGGSVAGRFVLGAEDTPIVDGPTPEAVLAVLRDVIDGLLLARKKVA*
Ga0066692_102144673	3300005555	Soil	KQKIIAVRHLRAGGRLIPVHFSRNAGGSVAGRAVLGAQDTPILDGPDPEAVLAVLRDVIDGLLLARRSA*
Ga0066700_100682793	3300005559	Soil	VNQKNLIGVRHLRAGGRLIPVQFYRNDGGSVAGRFVLGAQDTPILDGPNPEAVLALLRDVIDGLLLARKVA*
Ga0066700_101688231	3300005559	Soil	VTKQKIIAVRHLRAGGRLIPVHFSRNAGGSVAGRAVLGAQDTPILDGPDPEAVLAVLRDVIDGLLLAR
Ga0066693_104828141	3300005566	Soil	LRAGGRLIPVQFSRNAGGSVAGQAVLSDQDTPIVDGPDPEAVLAVLRDVIDGLLLARRTA
Ga0066703_103912331	3300005568	Soil	VNSQKQKIIAVRHLRAGGRLIPVHFSRNAGGSVAGRAVLGAEDTPILDGPDPEAVLAVLRDVIDGLLLARRSA*
Ga0066706_100131193	3300005598	Soil	VTKQKIIAVRHLRAGGRVIPVHFSRNAGGSVAGRAVLGAQDTPILDGPDPEAVLAVLRDVIDGLLLARRSAFGGRD*
Ga0066696_104364452	3300006032	Soil	SCVTQENLIGVRHLRVGGRLVPVQLFRNAGGSVAGRFVLGAEDTPIVDGPTPEAVLELLRDVLDGLLLARKSA*
Ga0070716_1006784582	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VTHQKPIEVRHLRAGGRTIPVQFFRNAGGSVAGRFVLGAEDTPIVDGPTPEAVLAVLRDAIDGLLLARKKVA*
Ga0066659_101705332	3300006797	Soil	VTEQKIIAVRHLRAGGRLIPVHFSRNAGGSVAGRAVLGAQDTPILDGPDPEAVLAVLRDVIDGLLLARRTA*
Ga0066660_106346101	3300006800	Soil	VTKQKIIAVRLLRAGGRVIPVHFSRNAGGSVAGRAVLGAQDTPILDGPDPEAVLAVLRDVIDGLLLARRPALASRG*
Ga0079220_118192471	3300006806	Agricultural Soil	LPVGVTHQKPIEVRHLRAGGRTIPVQFFRNAGGSVAGRFVLGAEDTPIVDGPTPEAVLAVLRDAIDGLLLARKKVA*
Ga0075424_1002359011	3300006904	Populus Rhizosphere	VAFAPATPIVNRKKLKPRIIAVRHLRAGGRLIPIQFSRNAGGSIAGRAVISAKDTPIVDGPDQEAVLAVLRDVMDGVLLARRS
Ga0099791_100372201	3300007255	Vadose Zone Soil	HLRAGGRLIPVQFSRNAGGSVAGQAVLSDQDTPIVDGPDPEAVLAVLRDVIDGLLLARRTA*
Ga0099791_100718772	3300007255	Vadose Zone Soil	VTQQKIFAVRHLRVGGRVIPVQLSRNDGGSVAGQALLSAQDTPIVDGPDADAVLATLRDVIEELLFARQSA*
Ga0099791_103907201	3300007255	Vadose Zone Soil	VTQQKIFAVRHLRVGGRVIPVQLSRNDGGSVAGQAVLSAQDTPIVDGPDAEAVLAVLRDVIEELLLARQSA*
Ga0099794_100802062	3300007265	Vadose Zone Soil	VTEQKIIAVRHLRAGGRLIPVQFSRNAGGSVAGQAVLSAQDTPIVDGPDPEAVLAVLKDVIDGLLLARSAV*
Ga0099795_103178872	3300007788	Vadose Zone Soil	LLPTGIVTQQKIFAVRHLRVGRRVIPVQLSRNDGGSVAGQALLSAQDTPIVDGPDADAVLATLRDVIDELLLARQSA*
Ga0066710_1001094931	3300009012	Grasslands Soil	VTKQKIIAVRHLRAGGRLIPVHFSRNAGGSVAGRAVLGAEDTPILDGPDPEAVLAVLRDVIDGLLLAR
Ga0066710_1047490212	3300009012	Grasslands Soil	QKIIAVRHLRAGGRLIPVHFSRNAGGSVAGRAVLGAQDTPILDGPDPEAVLAVLRDVIDGLLLARRSA
Ga0099829_102698922	3300009038	Vadose Zone Soil	VNQKKLIGVRHLRAGGRLIPVQFFRNDNGSVAGRFMLGAQDTPILDGPDPEAVLELMRDVLDGLLLARKVA*
Ga0099829_109886562	3300009038	Vadose Zone Soil	TQPKLIAVRHLQAGGRLIPVHFFQNDGGSVAGRFVLSAKDTPILDGPTPEAVLELMRDVLDGLLLAREAA*
Ga0099830_103413132	3300009088	Vadose Zone Soil	VTQTQPKLIAVRHLQAGGRLIPVHFFQNDGGSVAGRFVLSAKDTPILDGPTPEAVLELMRDVLDGLLLAREAA*
Ga0099828_101244142	3300009089	Vadose Zone Soil	VDNKKLIAVRYVRAAGRVIPVHFFRNDGGSVAGRFMLDPKDTPILDGPTPEAILALWRDVKDGLLLAREAA*
Ga0099828_104236532	3300009089	Vadose Zone Soil	MNQKNLIEVRHVEAGGRLIPVQFFRNAGGSVAGRFMLGAQDTPIVDGPDPEAVLEILRDVLDGLLLARKPA*
Ga0066709_1000134229	3300009137	Grasslands Soil	VTQQKIIAVRHLRAGGRLIPVQFSRNAGGSVAGQAVLSDQDTPIVDGPDPEAVLAVLRDVIDGLLLARRTA*
Ga0066709_1000981731	3300009137	Grasslands Soil	QKIIAVRHLRAGGRLIPVHFSRNAGGSVAGRAVLGAQDTPILDGPDPEAVLAVLRDVIDGLLLARRSA*
Ga0126374_107410352	3300009792	Tropical Forest Soil	LLRAIIVDEQKIFAVRHLRVGGRVIPVQLSRNEGGSVAGQAVLSAQDTPIVDGPDAEAVLAVLRDVIEELLLARQSA*
Ga0126384_102402053	3300010046	Tropical Forest Soil	LLRAIIVNQQKIFAVRHLRVGGRVIPVQLSRNEGGSVAGQALLSAQDTPIVDGPDAEAVLAVLRDVIEELLLARQSA*
Ga0134088_101389692	3300010304	Grasslands Soil	VAEQKIFAVRHLRAGGRVISVQLSRNAGGSVAGKAMLSAHDTPIVDGPDAEAVLAMLRDVIDGLLLARQTA*
Ga0126372_121601212	3300010360	Tropical Forest Soil	VTHSQKVFAVRHLRVGGRVIPVQLSRNDGGSVAGQAVLSAQDTPIVDGPDAETVLAVLRDVIEELLLARQSA*
Ga0134127_130814721	3300010399	Terrestrial Soil	VTDQKLIGVRHLKAGGRLIPIQLFRNAGGSVAARVMLGDQDTPILDGPTPEAVLDLMKDVLEGLLLARKVAA*
Ga0134121_132828071	3300010401	Terrestrial Soil	LLEGGSVSGEEIIAVRHLQAGGRSITVQFFRNEGGSVAGRAVLGAEDTPIVDGPDPDAVLDVFRDVMDGLLLARE
Ga0126350_109058402	3300010880	Boreal Forest Soil	GFVNTQKLIAVRHLRAGGRLIPVHFFRNAGGSVAGRFLLSAQDTPIVDGPNPEAVLELLRDVIEGLLLARKPA*
Ga0137364_102080741	3300012198	Vadose Zone Soil	KIIAVRHLRAGGRLIPVHFSRNAGGSVAGRAVLGAQDTPILDGPDPEAVLAVLRDVIDGLLLARRSA*
Ga0137363_101702212	3300012202	Vadose Zone Soil	VTQQKIIAVRHLRAGGRLIPVQFSRNAGGSVAGQAVLSAQDTPIVDGPDPEAVLAVLKDVIDGLLLARSNA*
Ga0137363_112306111	3300012202	Vadose Zone Soil	VTQQKIIAVRHLRAGGRLIPVHFSRNAGGSVAGRAVLGAQDTPILDGPDPEAVLAVLRDVIDGLLLARRPA*
Ga0137399_100998212	3300012203	Vadose Zone Soil	LARDLLYSPGVTQQKIIAVRHLRAGGRLIPVQFSRNAGGSVAGQAVLSDQDTPIVDGPDPEAVLAVLRDVIDGLLLARRTA*
Ga0137362_100500713	3300012205	Vadose Zone Soil	VTQQKIIAVRHLRAGGRLIPVHFSRNAGGSVAGRAVLGAQDTPILDGPDPEAVLAVLRDVIDGLLLARQTA*
Ga0137362_100566482	3300012205	Vadose Zone Soil	VTQQKIIAVRHLRAGGRLIPVQFSRNAGGSVAGQAVLSAQDTPIVDGPDPEAVLAVLKDVIDGLLLARSTA*
Ga0137376_103745202	3300012208	Vadose Zone Soil	VNSQKQKIIAVRHLRAGGRLIPVHFSRNAGGSVAGRAVLGAQDTPILDGPDPEAVLAVLRDVIDGLLLARRSA*
Ga0137358_101362442	3300012582	Vadose Zone Soil	LLPTGIVTQQKIFAVRHLRVGGRVIPVQLSRNDGGSVAGQALLSAQDTPIVDGPDADAVLATLRDVIEELLFARQSA*
Ga0137358_103034301	3300012582	Vadose Zone Soil	RHLRAGGRLIPVQFSRNAGGSVAGQAVLSAQDTPIVDGPDPEAVLAVLKDVIDGLLLARSTA*
Ga0137397_100049027	3300012685	Vadose Zone Soil	VTQQKIFAVRHLRVGGRVIPVQLSRNDGGSVAGQAVLSAQDTPIVDGPDAEAVLAVLSDVIEELLLARQSA*
Ga0137397_100099804	3300012685	Vadose Zone Soil	VTQQKIIAVRHLRAGGRLIPVQFSRNAGGSVAGQAVLSAKDTPIVDGPDPEAVLAVLKDVIDGLLLARSTA*
Ga0137396_101766433	3300012918	Vadose Zone Soil	VTQQKIIAVRHLRAGGRLIPVQFSRNAGGSVAGQAVLSAQDTPIVDGPDPEAVLAVLKDVIDGLLLARSTV*
Ga0137394_113289502	3300012922	Vadose Zone Soil	VLARRLLLFRGVTQENLIGVRHLRVGGRLIPVQLFRNAGGSVAGRFVLGAQDTPIVDGPTPEAVLDLLRDVLDGLLLARKSA*
Ga0137413_105167962	3300012924	Vadose Zone Soil	VTQQKIIAVRHLRVGGRLIPVQFSRNAGGSVAGQAVLSAQDTPIVDGPDPEAVLAVLKDVIDGLLLARSTA*
Ga0137416_117616501	3300012927	Vadose Zone Soil	VTQQKIIAVRHLRAGGRLIPVQFSRNAGGSVAGQAVLSAQDTPIVDGPDPEAVLAVLKDVIDCLLLARSTV*
Ga0137407_100061667	3300012930	Vadose Zone Soil	VTEQKIIAVRHLRAGGRLIPVHFSRNAGGSVAGRAVLGAQDTPILDGPDPEAVLAVLRDVIDGLLLARQTA*
Ga0137407_123227151	3300012930	Vadose Zone Soil	VTKQKIIAVRHLRAGGRLIPVHFSRNAGGSVAGRAVLGAQDTPILDGPDPEAVLAVLRDVIDGLLLARRPA
Ga0137410_106025882	3300012944	Vadose Zone Soil	VTEENLIGVRHLRVGGRLVPVQLFRNAGGSVAGRFVLGAQDTPIVDGPTPEAVLDLLRDVLDGLLLARKSA*
Ga0126375_119537791	3300012948	Tropical Forest Soil	MNQQKIIAVRHLRAGGRLIPVHFFRNDGGSVAGRFVLGAQDTPILDGPNPDAVLALLRDVIDGLLLARKSA*
Ga0134087_100055632	3300012977	Grasslands Soil	VTPQKQKIIAVRHLRAGGRLIPVHFSRNAGGSVAGRAVLGAQDTPILDGPDPEAVLAVLRDVIDGLLLARRSA*
Ga0134087_102449722	3300012977	Grasslands Soil	CFPERIVTQQKLIAVRHLRAGGRLIPVHFFRNDGGSVAGRFVLGAEDTPIVDGPTPEAVLAVLRDVIDGLLLARKKVA*
Ga0134081_101925332	3300014150	Grasslands Soil	VTQENLIGVRHLRVGGRLIPVQLFRNAGGSVAGRFVLGAQDTPIVDGPTPEAVLDLLRDVLDGLLLARKSA*
Ga0137405_10343191	3300015053	Vadose Zone Soil	GARFALLAGVTQQKIIAVRHLRAGGRLIPVQFSRNAGGSVAGQAVLSAQDTPIVDGPDPEAVLAVLKDVIDGLLLARSNA*
Ga0137405_10615512	3300015053	Vadose Zone Soil	VTQQKIIAVRHLRAGGRLIPVQFSRNAGGSVAGQAVLSAQDTPIVDGPDPEAVLAVLKDVIDGLLLARSTACGYSRGGLIRVGW
Ga0167648_10065702	3300015171	Glacier Forefield Soil	MARRLARLLLPSGFVTQTKLIAVRHLRADGRLVPVHFFRNDGGSVAGRFMLGAEDTPILDGPNPEAVLELLRDVLDGLLLARKLV*
Ga0137403_103018431	3300015264	Vadose Zone Soil	VTKQKIIAVRHLRAGGRLIPVHFSRNAGGSVAGRAVLGAQDTPILDGPDPEAVLAVLRDVIDGLLLARQTA*
Ga0187824_102900152	3300017927	Freshwater Sediment	VPGEEIIAVRHLQAGGRSITVQFFRNEGGSVAGRAVLGAEDTPIVDGPDPDAVLDVFRDVIDGLL
Ga0184605_100763703	3300018027	Groundwater Sediment	VTQQKIIAVRHLRAGGRLIPVHFSRNAGGSVAGRAVLGAQDTPILDGPDPEAVLAVLRDVIDGLLLARRSA
Ga0066655_103622212	3300018431	Grasslands Soil	VTKKKIIAVRHLRAGGRLIPVHFSRNAGGSVAGRAVLGAQDTPILDGPDPEAVLAVLRDVIDGLLLARRSAFGGRD
Ga0066655_103722332	3300018431	Grasslands Soil	LLYSPDVTQQKIIAVRHLRAGGRLLPVQFSRNAGGSVAGQAVLSDQDTPIVDGPDPEAVLAVLRDVIDGLLLARRTA
Ga0066667_103621401	3300018433	Grasslands Soil	VTQQKLIAVRHLRAGGRLIPVHFFRNDGGSVAGRFVLGAEDTPIVDGPTPEAVLAVLRDVIDGLLLARKKVA
Ga0066667_112218391	3300018433	Grasslands Soil	VTKQKIIAVRHLRAGGRLIPVHFSRNAGGSVAGRAVLGAEDTPILDGPDPEAVLAVLRDV
Ga0066669_112734592	3300018482	Grasslands Soil	VNQKNLIGVRHLRAGGRLIPVQFYRNDGGSVAGRFVLGAQDTPILDGPNPEAVLALLRDVIDGLLLARKVA
Ga0137408_10289172	3300019789	Vadose Zone Soil	LAGVTQQKIIAVRHLRAGGRLIPVQFSRNAGGSVAGQAVLSAQDTPIVDGPDPEAVLAVLKDVIDGLLLARSNA
Ga0137408_11086481	3300019789	Vadose Zone Soil	LLHLPSVTQQKIIAVRHLRAGGRLIPVQFSRNAGGSVAGQAVLSAQDTPIVDGPDPEAVLAVLKDVIDGLLLARSTA
Ga0137408_12058512	3300019789	Vadose Zone Soil	VTEQKIIAVRHLRAGGRLIPVHFSRNAGGSVAGRAVLGAQDTPILDGPDPEAVLAVLRDVIDGLLLARQTA
Ga0137408_12823393	3300019789	Vadose Zone Soil	VTQQKIIAVRHLRAGGRLIPVQFSRNAGGSVAGQAVLSAQDTPIVDGPDPEAVLAVLKDVIDGLLLARSTA
Ga0206353_101692492	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	TLVNPQKLIAVRHLRAGGRLIPGHFFRNDGGSVAGRFVLSAEDTPILDGPNPEAVLDLMRDVIDGLLLARKSA
Ga0187846_103138551	3300021476	Biofilm	MGPRRGPSSWRGPCFLCATVNQPKLIGVRHLKAGGRLIPVQFFQNDGGSVAGRFMLGAQDTPIVDGPTPEAVLELLRDVLDGLLLARKSAA
Ga0207684_100424282	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VTRQTIIEVRHLRAGGRLIPVHFSRNAGGSVAGRAVLSPQDTPIVDGPDPETVLALLRDIIDGLLLARQSPDAAPA
Ga0207684_101451782	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VTKQKIIAVRHLRAGGRLIPVHFSRNAGGSVAGRAVLGAQDTPILDGPDPEAVLAVLRDVIDGLLLARRPALASRG
Ga0207707_102151242	3300025912	Corn Rhizosphere	VSGEEIIAVRHLQAGGRSITVQFFRNEGGSVAGRAVLGAEDTPIVDGPDPDAVLDVFRDVMDGLLLAREPA
Ga0207665_102857692	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	VTKQKIIAVRHLRAGGRLIPVHFSRNAGGSVAGRAVLGAQDTPILDGPDPEAVLAVLRDVIDGLLLAFTRR
Ga0207665_104441033	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	VTHQKPIEVRHLRAGGRTIPVQFFRNAGGSVAGRFVLGAEDTPIVDGPTPEAVLAVLRDAIDGLLLARKKVA
Ga0207702_103343692	3300026078	Corn Rhizosphere	VTDQKLIGVRHLKAGGRLIPIQLFRNAGGSVAARVMLGDQDTPILDGPTPEAVLDLMKDVLEGLLLARKVAA
Ga0209234_10267822	3300026295	Grasslands Soil	VTEQKIIAVRHLRAGGRLIPVHFSRNAGGSVAGRAVLGAQDTPILDGPDPEAVLAVLRDVIDGLLLARRPALASRG
Ga0209235_10014158	3300026296	Grasslands Soil	VTQQKIIAVRHLRAGGRLIPVHFSRNAGGSVAGRAVLGAQDTPILDGPDPEAVLAVLRDVIDGLLLARQTA
Ga0209027_11310692	3300026300	Grasslands Soil	VTEQKIIAVRHLRAGGRLIPVHFSRNAGGSVAGRAVLGAQDTPILDGPDPEAVLAVLRDVIDGLLLARRTA
Ga0209238_10432711	3300026301	Grasslands Soil	VTQQKIIAVRHLRAGGRLIPVHFSRNAGGSVAGRAVLGAQDTPILDGPDPEAVLAVLRDVIDGLLLARRTA
Ga0209055_10611562	3300026309	Soil	VTKQKIIAVRHLRAGGRVIPVHFSRNAGGSVAGRAVLGAQDTPILDGPDPEAVLAVLRDVIDGLLLARRPALASRG
Ga0209686_12098421	3300026315	Soil	EQTIIAVRHLRAGGRLIPVHFSRNAGGSVAGRAVLGAQDTPILDGPDPEAVLAVLRDVIDGLLLARRTA
Ga0209647_10566372	3300026319	Grasslands Soil	VNQKNLIEVRHVQADGRLIPVHFFRNAGGSVAGRCMLGAQDTPIVDGPDPETVLEILRDVLDGLLLARKPA
Ga0209152_101626492	3300026325	Soil	VTREKIIAVRHVSAEGRLIEVHFFRNAGGSVAGRAVLGAQDTPILDGPDPEAVLELLRDVMDGVLLARRATMPGDPQSIAR
Ga0209473_10476241	3300026330	Soil	ETEIVTKKKIIAVRHLRAGGRLIPVHFSRNAGGSVAGRAVLGAQDTPILDGPDPEAVLAVLRDVIDGLLLARRPALASRG
Ga0209804_10284681	3300026335	Soil	VTKQKIIAVRHLRAGGRVIPVHFSRNAGGSVAGRAVLGAQDTPILDGPDPEAVLAVLRDV
Ga0209059_11764152	3300026527	Soil	VTHPKIIAVRHLRAGGRLIPIQFFRNQGGSVAGRAVLGDHDMPIVDGPDPETVLELLRDVIDDLLLARKS
Ga0209474_100082985	3300026550	Soil	VTKKKIIAVRHLRAGGRLIPVHFSRNAGGSVAGRAVLGAQDTPILDGPDPEAVLAVLRDVIDGLLLARRPALASRG
Ga0209474_103871542	3300026550	Soil	SVTQQKQKIIAVRHLRAGGRLIPVHFSRNAGGSVAGRAVLGVQDTPIVDGPDPEAVLAVLRDVIDGLLLARQSA
Ga0209648_100700362	3300026551	Grasslands Soil	VNQKKLIGVRHLRAGGRLIPVQFFRNDNGSVAGRFMLGAQDTPILDGPDPEAVLELMRDLLDGLLLARKVA
Ga0208995_10756532	3300027388	Forest Soil	LRVGGRLIPVQFSRNAGGSVAGQAVLSAQDTPIVDGPDPEAVLAVLKDVIDGLLLARSTA
Ga0209076_10176751	3300027643	Vadose Zone Soil	VTEQKIIAVRHLRAGGRLIPVQFSRNAGGSVAGQAVLSAQDTPIVDGPDPEAVLAVLKDVIDGLLLARSNA
Ga0209388_10230991	3300027655	Vadose Zone Soil	AVRHLRAGGRLIPVQFSRNAGGSVAGQAVLSDQDTPIVDGPDPEAVLAVLRDVIDGLLLARRTA
Ga0209588_10421142	3300027671	Vadose Zone Soil	VTEQKIIAVRHLRAGGRLIPVQFSRNAGGSVAGQAVLSAQDTPIVDGPDPEAVLAVLKDVIDGLLLARSAV
Ga0209588_11140072	3300027671	Vadose Zone Soil	VTQQKIIAVRHLRAGGRLIPVQFSRNAGGSVAGQAVLSAQDTPIVDGPDPEAVLAVLKDVIDGLLLARSTV
Ga0209011_10013986	3300027678	Forest Soil	LLTTSFVNPTQPKLIAVRHLHAGGRLIPVHFFQNDGGSVAGRFVLSAKDTPILDGPTPEAVLELMRDVLDGLLLAREAA
Ga0208989_101347592	3300027738	Forest Soil	GARFALFGGVTQQKIIAVRHLRVGGRLIPVQFSRNAGGSVAGQAVLSAQDTPIVDGPDPEAVLAVLKDVIDGLLLARSNA
Ga0209689_12249822	3300027748	Soil	VTHQKLIAVRHLRAGGRVIPVHFFRNDGGSVAGRFVLGAEDTPIVDGPTPEAVLAVLRDVIDGLLLARKKVA
Ga0209701_105662932	3300027862	Vadose Zone Soil	VTQTQPKLIAVRHLQAGGRLIPVHFFQNDGGSVAGRFVLSAKDTPILDGPTPEAVLELMRDVLDGLLLAREAA
Ga0209590_103066452	3300027882	Vadose Zone Soil	VDNKKLIAVRYVRAAGRVIPVHFFRNDGGSVAGRFMLDPKDTPILDGPTPEAILALWRDVKDGLLLAREAA
Ga0137415_100498866	3300028536	Vadose Zone Soil	SGPRVGARLAPLTNVTEQKIIAVRHLRAGGRLIPVQFSRNAGGSVAGQAVLSAQDTPIVDGPDPEAVLAVLKDVIDGLLLARSTV
Ga0307469_100968432	3300031720	Hardwood Forest Soil	VLWRAGCFLKRTVNQQKPIEVRHLRAGGRLIPVQFFRNAGGSVAGRFVLGAEDTPIVDGPTPEAVLAVLRDVIDGLLLARKKVA
Ga0307468_1009818812	3300031740	Hardwood Forest Soil	VIVTQQKIFAVRHLRVGGRVIPVQLSRNDGGSVAGQAVLSAQDTPIVDGPDADAVLAVLRDVIE
Ga0307473_103887102	3300031820	Hardwood Forest Soil	VIVTQQKIFAVRHLRVGGRVIPVQLSRNDGGSVAGQAVLSAQDTPIVDGPDADAVLAVLRDVIEELLLARQSA
Ga0307479_100052827	3300031962	Hardwood Forest Soil	VNQQKLIGVRHLRAGGRLIPVQFFQNDGGSVAGRALLGAKDTPILDGPTPEAVLELLRDVIDGLLLARKAA
Ga0307472_1020042462	3300032205	Hardwood Forest Soil	VRHLRAGGRLIPVQFFRNAGGSVAGHFVLGAEDTPIVDGPNPEAILAVLRDVIDGLLLARKKVA
Ga0335079_101708984	3300032783	Soil	VDDDKLIGVRHLKAGGRLIPVQFFRNAGGSVAGRVMLGDQDTPILDGPTPEAVLDLMKDVLDGLLLARKNAA
Ga0335080_113465712	3300032828	Soil	VNEQKLIGVRHLKAGGRLIPVQFFRNAGGSVAGRVMLGDQDTPILDGPTPEAVLDLARDVLDGLLLARKSAA
Ga0335077_114162642	3300033158	Soil	RLWQGACFSRRTVDDDKLIGVRHLKAGGRLIPVQFFRNAGGSVAGRVMLGDQDTPILDGPTPEAVLDLMKDVLDGLLLARKNAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F064007

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences