Metagenome / Metatranscriptome Family F063989

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F063989
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	63 residues
Representative Sequence	MWQRAVRIGGYVLIGFVIGSLILGTIKGNSFLTNVVYGLWTGAIAGAIVGILVFGVLAVRRRQ
Number of Associated Samples	107
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	12.40 %
% of genes near scaffold ends (potentially truncated)	13.18 %
% of genes from short scaffolds (< 2000 bps)	83.72 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.72

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.225 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (24.031 % of family members)
Environment Ontology (ENVO)	Unclassified (31.008 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.163 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 63.74% β-sheet: 0.00% Coil/Unstructured: 36.26%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.72
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.72
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.104.1.0: automated matches	d2hi4a_	2hi4	0.69668
a.104.1.0: automated matches	d6l8ia_	6l8i	0.69162
a.104.1.0: automated matches	d3gw9a_	3gw9	0.68694
c.94.1.0: automated matches	d4paka1	4pak	0.6808
f.41.1.0: automated matches	d5awwy_	5aww	0.68007

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF04454	Linocin_M18	61.24
PF00188	CAP	5.43
PF13561	adh_short_C2	3.88
PF00171	Aldedh	3.88
PF12704	MacB_PCD	1.55
PF02551	Acyl_CoA_thio	0.78
PF00106	adh_short	0.78
PF16313	DUF4953	0.78
PF11085	YqhR	0.78
PF01196	Ribosomal_L17	0.78
PF00211	Guanylate_cyc	0.78
PF01041	DegT_DnrJ_EryC1	0.78
PF02518	HATPase_c	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG2340	Spore germination protein YkwD and related proteins with CAP (CSP/antigen 5/PR1) domain	Cell cycle control, cell division, chromosome partitioning [D]	5.43
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	3.88
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	3.88
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	3.88
COG0203	Ribosomal protein L17	Translation, ribosomal structure and biogenesis [J]	0.78
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	0.78
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	0.78
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	0.78
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	0.78
COG1104	Cysteine desulfurase/Cysteine sulfinate desulfinase IscS or related enzyme, NifS family	Amino acid transport and metabolism [E]	0.78
COG1946	Acyl-CoA thioesterase	Lipid transport and metabolism [I]	0.78
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.78
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.22 %
Unclassified	root	N/A	0.78 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.22 %
Unclassified	root	N/A	0.78 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.22 %
Unclassified	root	N/A	0.78 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	36.43 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	27.91 %
Unclassified	root	N/A	0.78 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	27.91 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.55 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.78 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.78 %
Unclassified	root	N/A	0.78 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	15.50 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	3.10 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.55 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.78 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.78 %
Unclassified	root	N/A	0.78 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	12.40 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	3.10 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.55 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.78 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.78 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.78 %
Unclassified	root	N/A	0.78 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	12.40 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	2.33 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.55 %
Iamiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae	0.78 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.78 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.78 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.78 %
Unclassified	root	N/A	0.78 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	12.40 %
unclassified Acidimicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae	2.33 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.55 %
Aquihabitans	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans	0.78 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.78 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.78 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.78 %
Unclassified	root	N/A	0.78 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	12.40 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	2.33 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.55 %
unclassified Aquihabitans	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans	0.78 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.78 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.78 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.78 %
Unclassified	root	N/A	0.78 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	12.40 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	2.33 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.55 %
Aquihabitans sp. G128	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. G128	0.78 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.78 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.78 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.78 %
Unclassified	root	N/A	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_101279950	All Organisms → cellular organisms → Bacteria	1743	Open in IMG/M
3300000956\|JGI10216J12902_102928444	All Organisms → cellular organisms → Bacteria → Proteobacteria	1334	Open in IMG/M
3300000956\|JGI10216J12902_114604194	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	523	Open in IMG/M
3300005162\|Ga0066814_10064130	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300005166\|Ga0066674_10313687	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	737	Open in IMG/M
3300005167\|Ga0066672_10401856	All Organisms → cellular organisms → Bacteria → Proteobacteria	896	Open in IMG/M
3300005168\|Ga0066809_10008582	All Organisms → cellular organisms → Bacteria → Proteobacteria	1869	Open in IMG/M
3300005169\|Ga0066810_10043835	All Organisms → cellular organisms → Bacteria	850	Open in IMG/M
3300005177\|Ga0066690_10084896	All Organisms → cellular organisms → Bacteria → Proteobacteria	2009	Open in IMG/M
3300005180\|Ga0066685_10619676	All Organisms → cellular organisms → Bacteria → Proteobacteria	745	Open in IMG/M
3300005184\|Ga0066671_10221051	All Organisms → cellular organisms → Bacteria	1151	Open in IMG/M
3300005187\|Ga0066675_10850989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	690	Open in IMG/M
3300005332\|Ga0066388_100001498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	13217	Open in IMG/M
3300005406\|Ga0070703_10043953	All Organisms → cellular organisms → Bacteria → Proteobacteria	1403	Open in IMG/M
3300005436\|Ga0070713_100353456	All Organisms → cellular organisms → Bacteria → Proteobacteria	1364	Open in IMG/M
3300005447\|Ga0066689_10551898	All Organisms → cellular organisms → Bacteria → Proteobacteria	728	Open in IMG/M
3300005451\|Ga0066681_10281305	All Organisms → cellular organisms → Bacteria → Proteobacteria	1015	Open in IMG/M
3300005467\|Ga0070706_100353463	All Organisms → cellular organisms → Bacteria → Proteobacteria	1370	Open in IMG/M
3300005555\|Ga0066692_10447162	All Organisms → cellular organisms → Bacteria → Proteobacteria	823	Open in IMG/M
3300005560\|Ga0066670_10706179	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300005566\|Ga0066693_10428899	All Organisms → cellular organisms → Bacteria → Proteobacteria	540	Open in IMG/M
3300005586\|Ga0066691_10455628	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	764	Open in IMG/M
3300005587\|Ga0066654_10247018	All Organisms → cellular organisms → Bacteria → Proteobacteria	940	Open in IMG/M
3300005598\|Ga0066706_10216907	All Organisms → cellular organisms → Bacteria → Proteobacteria	1477	Open in IMG/M
3300005713\|Ga0066905_100067297	All Organisms → cellular organisms → Bacteria → Proteobacteria	2286	Open in IMG/M
3300005713\|Ga0066905_100550167	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300005764\|Ga0066903_103467338	All Organisms → cellular organisms → Bacteria	850	Open in IMG/M
3300005937\|Ga0081455_10176310	All Organisms → cellular organisms → Bacteria	1623	Open in IMG/M
3300006034\|Ga0066656_10564311	All Organisms → cellular organisms → Bacteria → Proteobacteria	739	Open in IMG/M
3300006049\|Ga0075417_10009972	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3486	Open in IMG/M
3300006173\|Ga0070716_101159103	All Organisms → cellular organisms → Bacteria → Proteobacteria	619	Open in IMG/M
3300006794\|Ga0066658_10554609	All Organisms → cellular organisms → Bacteria → Proteobacteria	625	Open in IMG/M
3300006804\|Ga0079221_10375259	All Organisms → cellular organisms → Bacteria → Proteobacteria	870	Open in IMG/M
3300006806\|Ga0079220_11847940	All Organisms → cellular organisms → Bacteria → Proteobacteria	534	Open in IMG/M
3300006844\|Ga0075428_100082296	All Organisms → cellular organisms → Bacteria → Proteobacteria	3512	Open in IMG/M
3300006844\|Ga0075428_100276272	All Organisms → cellular organisms → Bacteria	1807	Open in IMG/M
3300006845\|Ga0075421_100413724	All Organisms → cellular organisms → Bacteria	1617	Open in IMG/M
3300006845\|Ga0075421_100765126	All Organisms → cellular organisms → Bacteria → Proteobacteria	1115	Open in IMG/M
3300006847\|Ga0075431_100834536	All Organisms → cellular organisms → Bacteria → Proteobacteria	893	Open in IMG/M
3300006847\|Ga0075431_101141738	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	743	Open in IMG/M
3300006852\|Ga0075433_10035103	All Organisms → cellular organisms → Bacteria → Proteobacteria	4310	Open in IMG/M
3300006853\|Ga0075420_101278852	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300007076\|Ga0075435_100012075	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	6384	Open in IMG/M
3300009094\|Ga0111539_12971031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	548	Open in IMG/M
3300009100\|Ga0075418_11025945	All Organisms → cellular organisms → Bacteria → Proteobacteria	893	Open in IMG/M
3300009137\|Ga0066709_102381805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	721	Open in IMG/M
3300009143\|Ga0099792_11096129	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300009147\|Ga0114129_11216276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	938	Open in IMG/M
3300009147\|Ga0114129_11853406	All Organisms → cellular organisms → Bacteria → Proteobacteria	732	Open in IMG/M
3300009789\|Ga0126307_10031878	All Organisms → cellular organisms → Bacteria → Proteobacteria	4057	Open in IMG/M
3300009840\|Ga0126313_10009866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5975	Open in IMG/M
3300010037\|Ga0126304_10243207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1183	Open in IMG/M
3300010037\|Ga0126304_10286092	All Organisms → cellular organisms → Bacteria	1090	Open in IMG/M
3300010042\|Ga0126314_10063905	All Organisms → cellular organisms → Bacteria	2428	Open in IMG/M
3300010047\|Ga0126382_12439576	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300010147\|Ga0126319_1477828	All Organisms → cellular organisms → Bacteria → Proteobacteria	583	Open in IMG/M
3300010154\|Ga0127503_10307724	All Organisms → cellular organisms → Bacteria	941	Open in IMG/M
3300010166\|Ga0126306_10098902	All Organisms → cellular organisms → Bacteria	2105	Open in IMG/M
3300010166\|Ga0126306_11288054	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	602	Open in IMG/M
3300010301\|Ga0134070_10066890	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1224	Open in IMG/M
3300010321\|Ga0134067_10079633	All Organisms → cellular organisms → Bacteria	1096	Open in IMG/M
3300010323\|Ga0134086_10207694	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	733	Open in IMG/M
3300010325\|Ga0134064_10043128	All Organisms → cellular organisms → Bacteria	1363	Open in IMG/M
3300010333\|Ga0134080_10236460	All Organisms → cellular organisms → Bacteria → Proteobacteria	802	Open in IMG/M
3300010335\|Ga0134063_10031351	All Organisms → cellular organisms → Bacteria	2258	Open in IMG/M
3300010863\|Ga0124850_1018461	All Organisms → cellular organisms → Bacteria	2227	Open in IMG/M
3300012189\|Ga0137388_11375119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	645	Open in IMG/M
3300012198\|Ga0137364_10902239	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	669	Open in IMG/M
3300012199\|Ga0137383_10094592	All Organisms → cellular organisms → Bacteria → Proteobacteria	2167	Open in IMG/M
3300012201\|Ga0137365_10138608	All Organisms → cellular organisms → Bacteria	1829	Open in IMG/M
3300012201\|Ga0137365_10713066	All Organisms → cellular organisms → Bacteria → Proteobacteria	733	Open in IMG/M
3300012204\|Ga0137374_10027997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6223	Open in IMG/M
3300012204\|Ga0137374_10034493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5463	Open in IMG/M
3300012204\|Ga0137374_10531122	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300012206\|Ga0137380_10707689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	874	Open in IMG/M
3300012207\|Ga0137381_10497736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1063	Open in IMG/M
3300012207\|Ga0137381_10620201	All Organisms → cellular organisms → Bacteria	942	Open in IMG/M
3300012209\|Ga0137379_10314788	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1476	Open in IMG/M
3300012210\|Ga0137378_10718497	All Organisms → cellular organisms → Bacteria → Proteobacteria	910	Open in IMG/M
3300012211\|Ga0137377_10754135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	907	Open in IMG/M
3300012285\|Ga0137370_10714657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	622	Open in IMG/M
3300012350\|Ga0137372_10375338	All Organisms → cellular organisms → Bacteria	1083	Open in IMG/M
3300012350\|Ga0137372_11093141	All Organisms → cellular organisms → Bacteria → Proteobacteria	548	Open in IMG/M
3300012351\|Ga0137386_10525257	All Organisms → cellular organisms → Bacteria	852	Open in IMG/M
3300012353\|Ga0137367_10296963	All Organisms → cellular organisms → Bacteria → Proteobacteria	1156	Open in IMG/M
3300012353\|Ga0137367_10492528	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300012354\|Ga0137366_11171243	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300012355\|Ga0137369_10216578	All Organisms → cellular organisms → Bacteria	1469	Open in IMG/M
3300012355\|Ga0137369_10431850	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	943	Open in IMG/M
3300012356\|Ga0137371_10161729	All Organisms → cellular organisms → Bacteria → Proteobacteria	1756	Open in IMG/M
3300012356\|Ga0137371_10268038	All Organisms → cellular organisms → Bacteria → Proteobacteria	1332	Open in IMG/M
3300012359\|Ga0137385_10466105	All Organisms → cellular organisms → Bacteria	1071	Open in IMG/M
3300012360\|Ga0137375_10232394	All Organisms → cellular organisms → Bacteria	1717	Open in IMG/M
3300012532\|Ga0137373_10676364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	772	Open in IMG/M
3300012960\|Ga0164301_10281252	All Organisms → cellular organisms → Bacteria	1109	Open in IMG/M
3300012971\|Ga0126369_10273115	All Organisms → cellular organisms → Bacteria	1676	Open in IMG/M
3300012977\|Ga0134087_10167262	All Organisms → cellular organisms → Bacteria	967	Open in IMG/M
3300012977\|Ga0134087_10471398	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	626	Open in IMG/M
3300018072\|Ga0184635_10183128	All Organisms → cellular organisms → Bacteria → Proteobacteria	836	Open in IMG/M
3300018433\|Ga0066667_12316213	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300018468\|Ga0066662_10220014	All Organisms → cellular organisms → Bacteria → Proteobacteria	1521	Open in IMG/M
3300018482\|Ga0066669_12271632	Not Available	516	Open in IMG/M
3300021073\|Ga0210378_10357662	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300025885\|Ga0207653_10072331	All Organisms → cellular organisms → Bacteria → Proteobacteria	1180	Open in IMG/M
3300025910\|Ga0207684_10016368	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6369	Open in IMG/M
3300025910\|Ga0207684_10822708	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	784	Open in IMG/M
3300025928\|Ga0207700_10455704	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1128	Open in IMG/M
3300026295\|Ga0209234_1087101	All Organisms → cellular organisms → Bacteria → Proteobacteria	1184	Open in IMG/M
3300026308\|Ga0209265_1219936	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300026310\|Ga0209239_1358013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	511	Open in IMG/M
3300026538\|Ga0209056_10070762	All Organisms → cellular organisms → Bacteria	2995	Open in IMG/M
3300026551\|Ga0209648_10692220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	557	Open in IMG/M
3300026557\|Ga0179587_10391731	All Organisms → cellular organisms → Bacteria → Proteobacteria	905	Open in IMG/M
3300027560\|Ga0207981_1104836	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300027681\|Ga0208991_1059997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1148	Open in IMG/M
3300027738\|Ga0208989_10114928	All Organisms → cellular organisms → Bacteria → Proteobacteria	914	Open in IMG/M
3300027873\|Ga0209814_10000983	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9872	Open in IMG/M
3300027873\|Ga0209814_10001975	All Organisms → cellular organisms → Bacteria	7431	Open in IMG/M
3300027880\|Ga0209481_10049858	All Organisms → cellular organisms → Bacteria	1938	Open in IMG/M
3300027903\|Ga0209488_10756736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	692	Open in IMG/M
3300027909\|Ga0209382_10096352	All Organisms → cellular organisms → Bacteria → Proteobacteria	3471	Open in IMG/M
3300028771\|Ga0307320_10255116	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. G128	692	Open in IMG/M
3300028787\|Ga0307323_10080343	All Organisms → cellular organisms → Bacteria	1163	Open in IMG/M
3300028787\|Ga0307323_10156438	All Organisms → cellular organisms → Bacteria	823	Open in IMG/M
3300028787\|Ga0307323_10349318	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300030006\|Ga0299907_10975603	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	625	Open in IMG/M
3300030336\|Ga0247826_11108361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	632	Open in IMG/M
3300033550\|Ga0247829_11149181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	644	Open in IMG/M
3300034384\|Ga0372946_0124314	All Organisms → cellular organisms → Bacteria	1221	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.27%
Host-Associated	Host-Associated	14.73%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.17%
Plants	Host-Associated → Plants	14.73%
Aquatic	Environmental → Aquatic	3.10%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.17%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.95%
Freshwater	Environmental → Aquatic → Freshwater	2.33%
Sediment	Environmental → Aquatic → Sediment	0.78%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.95%
Loam	Environmental → Terrestrial → Soil → Loam	11.63%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.55%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.78%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	44.96%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	21.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.95%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.20%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.43%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.55%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.55%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.55%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	24.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	16.28%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	13.95%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	6.20%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.20%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	5.43%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.10%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.88%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.55%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.55%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.55%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.55%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.78%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.78%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010147	Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027560	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC (SPAdes)	Environmental	Open in IMG/M
3300027681	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034384	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_KNG_2.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1012799502	3300000956	Soil	MVKRAVRVGVYVLIGFVIGSLILGTIKGNEFVGNVVYGLWTGVIAGAIVAVIYGAVLAARQRQ*
JGI10216J12902_1029284442	3300000956	Soil	MWKRALRIGLYVVIGFVVGSLILGTIKGNEFVGNIVYGLWTGVIAGAVVAIIYAGVSAARQRQ*
JGI10216J12902_1146041942	3300000956	Soil	GVYVLIGFVIGSLILGTIKGNSFLTNVVYGLWTGAIAGAIVGILVFGVLAVRRRQ*
Ga0066814_100641302	3300005162	Soil	MWQRAVRIGGYVLIGFVIGSLILGTIKGNSFLTNLVYGLWTGAIAGAIVGVIVFGVLAVRRRP*
Ga0066674_103136872	3300005166	Soil	MWQRAVRIGGYVLIGFVIGSLILGTIKGNPFLTNVVYGLWTGAIAGAIVGVLVFGVLAVRRRP*
Ga0066672_104018561	3300005167	Soil	MWQRAVRIGGYVLIGFVIGSLILGTIKGNSFLTNVVYGLWTGAIAGAIVGVLVFGVLAVRRRS*
Ga0066809_100085823	3300005168	Soil	MWQRAVRIGGYVLIGFVIGSLILGTIKGNSFLTNVVYGLWTGAIAGAIVGILVFGVLAVRGRQ*
Ga0066810_100438352	3300005169	Soil	VLIGFVIGSLILGTIKGNAFLTNVVYGLWTGAIAGAIVGILVFGVLAVRGRQ*
Ga0066690_100848964	3300005177	Soil	MWQRAVRIGGYVLIGFVIGSLILGTIKGNSFLTNVVYGLWTGAIAGAIVGVLVFAVLAVRRRT*
Ga0066685_106196762	3300005180	Soil	MWQRAVRIGGYVLIGFVIGSLILGTIKGNSFLTNVVYGLWTGAVAGAIVGILVFGVLAVRRRQ*
Ga0066671_102210512	3300005184	Soil	MWQRPVRIGGYVLIGFVIGSLILGTIKGNPFLTNVVYGLWTGAIAGAIVGILVFGVLAVRRRS*
Ga0066675_108509892	3300005187	Soil	MWQRAVRIGGYVLIGFVIGSLILGTIKGNSFLTNVVYGLWTGAIAGAIAGIL
Ga0066388_1000014984	3300005332	Tropical Forest Soil	VWRRPVRIGIYVLIGFVVGSLILGTIKGNPFFTNLTYGLWTGALAGAIAGIVVFGVLAVRRRL*
Ga0070703_100439532	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MWQRAVRIGGYVLIGFVVGSLILGTIKGNSFLTNVVYGLWTGAIAGAIVGVLVFGVLAARRRP*
Ga0070713_1003534563	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MWQRAVRIGGYVLIGFVIGSLILGTIKGNPFLTNVVYGLWTGAIAGAIVGVLVFGVLAVRRRS*
Ga0066689_105518982	3300005447	Soil	MWQRAVRIGGYVLIGFVIGSLILGTIKGNSFLTNVVYGLWTGAIAGAIVGVLVFGVLAVRRRP*
Ga0066681_102813052	3300005451	Soil	MWQRAVRIGGYVLIGFVIGSLILGTIKGNSFLTNVVYGLWTGAIAGAIVGILVFGVLAVRRRQ*
Ga0070706_1003534632	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MWQRAVRIGGYVLIGFVIGSLILGTIKGNPFLTNVVYGLWTGAIAGAIVGVLVFGVLAARRRS*
Ga0066692_104471622	3300005555	Soil	MWQRAVRIGGYVLIGFVIGSLILGTIKGNSFLTNVVYGLWTGAIAGAIVGILVFGALAVRRRP*
Ga0066670_107061792	3300005560	Soil	VRIGGYVLIGFVIGSLILGTIKGNPFLTNVVYGLWTGAIAGAIVGILVFGVLAVRRRS*
Ga0066693_104288992	3300005566	Soil	MWQRAVRIGGYVLIGFVIGSLILGTIKGNSFLTNVVYGLWTGAIAGAIVGILVFGVLAVRRRL*
Ga0066691_104556282	3300005586	Soil	MWQRAVRIGGYVLIGFVIGSLILGTIKGNSFVTNVVYGLWTGAIAGAIVGVLVFGVLAVRRRP*
Ga0066654_102470182	3300005587	Soil	MWQRAVRIGGYVLIGFVIGSLILGTIKGNSFLTNVVYGLWTGAIAGAIAGILVFGVLAVRRRL*
Ga0066706_102169073	3300005598	Soil	MWQRAVRIGAYVLIGFVIGSLILGTIKGNSFLTNLVYGLWTGAIAGAIVGVLVFGVLAVRRRP*
Ga0066905_1000672972	3300005713	Tropical Forest Soil	MWRRPVRIGIYVLVGFVIGSLILGTWKGNPFFTNLTYGLWTGALAGAAVGIVVFGVIAVRQRL*
Ga0066905_1005501672	3300005713	Tropical Forest Soil	MPAPRSCTPEALDMWQRPVRIGVYVLIGFVIGSLILGTIKGNPFLTNLTYGLWTGALAGAVVAVLALGVTAARRRS*
Ga0066903_1034673382	3300005764	Tropical Forest Soil	MWRRPVRIGVYVLIGFVVGSLILGTIKGNPFFTNLTYGLWTGALAGAIVGIVVFGLLAVRRRS*
Ga0081455_101763103	3300005937	Tabebuia Heterophylla Rhizosphere	MSKRAMRIGVYVLIGFVVGSLILGTIKGNAFVDNIVYGLWTGAIAGAVVAVLYLGVTAARRRS*
Ga0066656_105643111	3300006034	Soil	VLIGFVIGSLILGTIKGNSFLTNVVYGLWTGAIAGAIVGILVFGVLAVRRRQ*
Ga0075417_100099721	3300006049	Populus Rhizosphere	MWRRAVRIGGYVLIGFVIGSLILGTIKGNPFLTNVVYGLWTGAIAGAIVGVLVFGVLAARRRP*
Ga0070716_1011591031	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	QRAVRIGGYVLIGFVIGSLILGTIKGNPFLTNVVYGLWTGAIAGAIVGVLVFGVLAVRRRS*
Ga0066658_105546092	3300006794	Soil	MWQRAVRIGGYVLIGFVVGSLILGTIKGNSFLTNVVYGLWTGAIAGAIVGILVFGALAVRRRP*
Ga0079221_103752592	3300006804	Agricultural Soil	MWQRAVRIGGYVLIGFVVGSLILGTIKGNSFLTNVVYGLWTGAIAGAIVGVLVFGVLAVRRRS*
Ga0079220_118479402	3300006806	Agricultural Soil	MWRRAVRIGGYVLIGFVIGSLILGTIKGNPFLTNVVYGLWTGAIAGAIVGVLVFGVLAVRRRS*
Ga0075428_1000822961	3300006844	Populus Rhizosphere	MWRRAVRIGGYVLIGFVIGSLILGTIKGNPFLTNVVYGLWTGAIAGAIVGVLVFGVLA
Ga0075428_1002762722	3300006844	Populus Rhizosphere	MWQRAVRIGGYVLIGFVIGSLILGTIKGNAFLTNVVYGLWTGAIAGAIVAILVFGVLAVRGRQ*
Ga0075421_1004137241	3300006845	Populus Rhizosphere	MWKRALRIGAYVLIGFVVGSLILGTVKGNAFADNIVYGLWTGAIAGVVVALVVLVVLSARRRT*
Ga0075421_1007651262	3300006845	Populus Rhizosphere	MWQRAVRIGGYVLVGFVIGSLILGTIKGNAFLTNVVYGLWTGAIAGVIVGILVFGVLAVRSRR*
Ga0075431_1008345361	3300006847	Populus Rhizosphere	MWQRAVRIGGYVLIGFVIGSLILGTIKGNPFLTNVVYGLWTGAIAGAIVGVLVFGVLTVRRRS*
Ga0075431_1011417381	3300006847	Populus Rhizosphere	RALRIGAYVLIGFVVGSLILGTVKGNAFADNIVYGLWTGAIAGVVVALVVLAVLSARRRT
Ga0075433_100351034	3300006852	Populus Rhizosphere	MWQRAVRIGGYVLIGFVIGSLILGTIKGNPFLTNVVYGLWTGAIAGAIVGVLVFGVLAARRRP*
Ga0075420_1012788522	3300006853	Populus Rhizosphere	MWKRALRIGVYVLVGFVVVSLILGTIKGNAFSENLVYGLWTGAIAGAVVAVVVLAVLSARRRT*
Ga0075435_1000120759	3300007076	Populus Rhizosphere	MWQRAVRIGGYVLIGFVIGSLILGTIKGNPFLTNVVYGLWTGAIAGAIVGVLVFGVLAVR
Ga0111539_129710311	3300009094	Populus Rhizosphere	MWQRAVRIGGYVLVGFVIGSLILGTIKGNAFLTNVVYGLWTGAIAGAIVAILVFGVLAVRGRQ*
Ga0075418_110259452	3300009100	Populus Rhizosphere	MWQRAVRVGGYVLIGFVIGSLILGTIKGNAFLTNVVYGLWTGAIAGAIVAILVFGVLAVRGRQ*
Ga0066709_1023818052	3300009137	Grasslands Soil	MWQRAVRIGGYVLIGFVIGSLILGTIKGNSFLTNVVYGLWTGAIAGAIIGILVFGVLAVRRRQ*
Ga0099792_110961292	3300009143	Vadose Zone Soil	VWRRPVRIGGYVLIGFVIGSLILGTIKGNSFVTNVVYGLWTGAIAGAIVGVLVFGVLAVRRRP*
Ga0114129_112162762	3300009147	Populus Rhizosphere	MWQRAVRIGGYVLIGFVIGSLILGTIKGNAFLTNVVYGLWTGAIAGAIVAILVFGVLAVRSRQ*
Ga0114129_118534062	3300009147	Populus Rhizosphere	MWQRAVRIGGYVLVGFVIGSLILGTIKGNAFLTNVVYGLWTGAIAGVIVGIVVFGVLAVRSRQ*
Ga0126307_100318782	3300009789	Serpentine Soil	MAKRAVRVGVYVLIGFVIGSLILGTIKGNAFLTNVVYGLWTGAIAGAIVGILVFGVLAVRRRQ*
Ga0126313_100098666	3300009840	Serpentine Soil	MWQRAVRLGAYVLVGFVIGSLILGTIKGNSFLTNVVYGLWTGAIAGVIVGLVAFSVLAVRRRR*
Ga0126304_102432072	3300010037	Serpentine Soil	MVKRAVRVGVYVLIGFVIGSLILGTIKGNEFVGNVVYGLWTGVIAGAIVAVIYAAVLAARQRQ*
Ga0126304_102860922	3300010037	Serpentine Soil	MAKRAVRVGVYVLIGFVIGSLILGTIKGNAFLTNVWYGLWTGAIAGAIVGILVFGVLAVRRRQ*
Ga0126314_100639054	3300010042	Serpentine Soil	MVKRPVRVGVYVLIGFVIGSLILGTIKGNEFVGNVVYGLWTGVIAGAIVAVIYAAVLAARQRQ*
Ga0126382_124395762	3300010047	Tropical Forest Soil	MWQRPVRIGVYVLIGFVIGSLILGTIKGNPFLTNLTYGLWTGALAGAVVAVLALGVTAARRRS*
Ga0126319_14778282	3300010147	Soil	MWQRAVRIGGYVLIGFVIGSLILGTIKGNSFLTNVVYGLWTGAIAGAVVAILVFGVLAARGRQ*
Ga0127503_103077241	3300010154	Soil	MWQRAVRIGGYVLIGFVIGSLILGTIKGNPFLTNVVYGLWTGAIAGAIVGILVLGVLAVRRRP*
Ga0126306_100989022	3300010166	Serpentine Soil	MVKRAVRVGVFVLIGFVIGSLILGTIKGNEFVGNLVYGLWTGVIAGAIVAAIYAGVMAARQRQ*
Ga0126306_112880541	3300010166	Serpentine Soil	MWKRPVRVGVYVLIGFVIGSLILGTIKGNPCVGNIVYGLWTGAIAGAVVAVIFAGVSAARQRQ*
Ga0134070_100668902	3300010301	Grasslands Soil	MWQRAVRIGGYVLIGFVIGSLILGTIKGNSFLTNVVYGLWTGAIAGAIAGILVFGVLAVRRRQ*
Ga0134067_100796332	3300010321	Grasslands Soil	MWQRAVRIGGYVLIGFVIGSLILGTIKGNSFLTNVVYGLWTGAIAGAIVGILVFGVLAVRRRS*
Ga0134086_102076942	3300010323	Grasslands Soil	SPMWQRAVRIGGYVLIGFVIGSLILGTIKGNSFLTNVVYGLWTGAIAGAIAGILVFGVLAVRRRQ*
Ga0134064_100431283	3300010325	Grasslands Soil	RAVRIGGYVLIGFVIGSLILGTIKGNSFLTNVVYGLWTGAVAGAIVGILVFGVLAVRRRQ
Ga0134080_102364602	3300010333	Grasslands Soil	MWHRAVRIGGYVLIGFVIGSLILGTIKGNSFLTNVVYGLWTGAIAGAIVGVLVFGVLAVRRRP*
Ga0134063_100313512	3300010335	Grasslands Soil	MWQRAVRIGGYVLIGFVIGSLILGTIKGNSFLTNVVYGLWTGAVAGAIVGILVFGVLAVRRRL*
Ga0124850_10184612	3300010863	Tropical Forest Soil	MVKRAVRIGVYVLVGFVIGSLILGTIKGNPFFTNLVYGLWTGALAGAIVGIVVLGLLAARRRL*
Ga0137388_113751192	3300012189	Vadose Zone Soil	MWQRAVRVGVYVLLGFVVGSVILGTVKGNAFLGNVVYGLWTGAIAGAVVAIIYFAVLAARSRQ*
Ga0137364_109022392	3300012198	Vadose Zone Soil	MWKRAVRVGAYVLIGFVVGSLILGTIKGNSFLTNVVYGLWTGAIAGAIVGILVFGALAVRRRP*
Ga0137383_100945922	3300012199	Vadose Zone Soil	MWQRAVRIGAYVLIGFVIGSLILGTIKGNSFLTNVVYGLWTGAIAGAIVGILVFGALAVRRRP*
Ga0137365_101386082	3300012201	Vadose Zone Soil	MWKRALRIGVYVVIGFVVGSLILGTIKGNEFVGNIVYGLWTGVIAGAIVAIIYAGISAARQRQ*
Ga0137365_107130662	3300012201	Vadose Zone Soil	MWQRAVRIGGCVLIGFVIGSLILGTIKGNSFLTNVVYGLWTGAIAGAIVGILVFGVLAVRRRQ*
Ga0137374_100279974	3300012204	Vadose Zone Soil	MLNRAIRVGGYVLLGFVIGSLILGTVKGNAFVDNIVYGLWTGVIAGAVVGLVVFGVLAARSRQ*
Ga0137374_100344933	3300012204	Vadose Zone Soil	MWKRAVRVGGYVLLGFVIGSLILGTVKGNTFVDNVVYGVWTGVIAGAVVGLIVFGVSAARSRQ*
Ga0137374_105311222	3300012204	Vadose Zone Soil	MWQRAVRIGGYVLIGFVIGSLILGTIKGNSFLTNVVYGLWTGAIAGALVAILVFGVTAARGRQ*
Ga0137380_107076892	3300012206	Vadose Zone Soil	MWRRAVRIGGYVLIGFVIGSLILGTIKGNSFLTNVVYGLWTGAIAGAIVGVLVFGVLAVRRRP*
Ga0137381_104977362	3300012207	Vadose Zone Soil	MWQRAVRIGGYVLIGFVIGSLILGTIKGNSFLTNVVYGLWTGAIAGAIVGVLVFAVSAVRRRT*
Ga0137381_106202012	3300012207	Vadose Zone Soil	VWRRPVRIGGYVLIGFVVGSLILGTIKGNSFLTNVVYGLWTGAIAGAIVGLLVFGVLAVRRRQ*
Ga0137379_103147883	3300012209	Vadose Zone Soil	MWRRAVRIGGYVLIGFVIGSLILGTIKGNSFLTNVVYGLWTGAIAGAIVGILVFGVLAVRRRQ*
Ga0137378_107184972	3300012210	Vadose Zone Soil	MWQRAVRIGAYVLIGFVIGSLILGTIKGNSFLTNVVYGLWTGAIAGAIVGLLVFGVLTVRRRP*
Ga0137377_107541353	3300012211	Vadose Zone Soil	AVRIGGYVLIGFVIGSLILGTIKGNSFLTNVVYGLWTGAIAGAIVGVLVFAVLAVRRRT*
Ga0137370_107146572	3300012285	Vadose Zone Soil	MWQRAVRIGGYVLIGFVIGSLILGTIKGNSFLTNVVYGLWTGAIAGAVVGVLVFGVLAVRRRP*
Ga0137372_103753383	3300012350	Vadose Zone Soil	VWRRPVRIGGYVLIGFVVGSLILGTIKGNSFLTNVVYGLWTGAIAGAIVGILVFGVLAVRRRQ*
Ga0137372_110931412	3300012350	Vadose Zone Soil	MWRRAVRIGGYVLIGFVIGSLILGTIKGNSFLTNVVYGLWTGAIAGAIVAILVFGVLAVRRRQ*
Ga0137386_105252572	3300012351	Vadose Zone Soil	MWQRAVRIGGYVLIGFVIGSLILGTIKGNSFLTNVVYGLWTGAIAGAIVGVLVFTVLAVRRRT*
Ga0137367_102969632	3300012353	Vadose Zone Soil	MVKRAVRVGVYVLIGFVIGSLILGTIKGNSFLTNVVYGLWTGAIAGAIVGILVFGVLAVRRRQ*
Ga0137367_104925281	3300012353	Vadose Zone Soil	MWKRAVRVGGYVLLGFVIGSLILGTVKGNAFVDNIVYGLWTGVIAGAVVGLVVFGVLAARSRQ*
Ga0137366_111712432	3300012354	Vadose Zone Soil	LSPYLRGEAAGTVRGMLNRAIRVGGYVLLGFVIGSLILGTVKGNAFVDNIVYGLWTGVIAGAVVGLVVFGVLAARSRQ*
Ga0137369_102165782	3300012355	Vadose Zone Soil	MVKRAVRVGVYVLIGFVIGSLILGTIKGNEFVGNVVYGLWTGVIAGAIVAVIYAVVMAARQRQ*
Ga0137369_104318501	3300012355	Vadose Zone Soil	MCKRAEQVGGYVLLGFVIVSLILGTVKGNAFVDHVVYGLWTGVIAGAVVGLVVFGVLAARSRQ*
Ga0137371_101617293	3300012356	Vadose Zone Soil	MWKRAVRVGVYVLIGFVVGSLILGTIKGNAFVGNVVYGLWTGAIAGMVVAIIYAGVSAARQRQ*
Ga0137371_102680383	3300012356	Vadose Zone Soil	VWRRPVRIGGYVLIGFVVGSLILGTIKGNSFLTNVVYGLWTGAIAGAIVGVLVFGVLAVRRRP*
Ga0137385_104661052	3300012359	Vadose Zone Soil	MWQRAVRIGGYVLIGFVIGSLILGTIKGNSFLTNVVYGLWTGAIAGAIVGILVFGVLAVCRRQ*
Ga0137375_102323942	3300012360	Vadose Zone Soil	MVKRAVRVGVYVLIGFVIGSLILGTIKGNEFVGNVVYGVWTGVIAGAIVAVIYAVVMAARQRQ*
Ga0137373_106763641	3300012532	Vadose Zone Soil	MWRRAVRIGGYVLIGFVIGSLILGTIKGNSFLTNVVYGLWTGAIAGAIVGTLVFGVLAMRRRQ*
Ga0164301_102812522	3300012960	Soil	MWQRAVRIGGYVLIGFVIGSLILGTIKGNPFLTNVVYGLWTGAIAGAIAGVLVFGVLAVRRRS*
Ga0126369_102731153	3300012971	Tropical Forest Soil	MVKRAVRIGVYVLVGFVIGSLILGTIKGNPFFTNLVYGLWTGALAGALVGIVVLGLLAARRRL*
Ga0134087_101672622	3300012977	Grasslands Soil	MWQRPVRIGGYVLIGFVIGSLILGTIKGNPFLTNVVYGLWTGAIAGAIVGILVFGVLAVRRRQ*
Ga0134087_104713982	3300012977	Grasslands Soil	MWQRAVRIGGYVLIGFVIGSLILGTIKGNSFLTNVVYGLWTGAIAGAIAGILVFG
Ga0184635_101831282	3300018072	Groundwater Sediment	MWQRAVRIGGYVLIGFVIGSLILGTIKGNSFLTNVVYGLWTGAIAGAIVAILVFGVLAVRGRQ
Ga0066667_123162132	3300018433	Grasslands Soil	MWQRAVRIGGYVLIGFVIGSLILGTIKGNSFLTNVVYGLWTGAIAGAIIGILVLAVLAVRRRT
Ga0066662_102200142	3300018468	Grasslands Soil	MWQRAVRIGGYVLIGFVVGSLILGTIKGNSFLTNVVYGLWTGAIAGAIVGVLVFAVLAVRRRT
Ga0066669_122716322	3300018482	Grasslands Soil	MWQRPVRIGGYVLIGFVIGSLILGTIKGNSFLTNVVYGLWTGAIAGAIVGVLVFGVLAVRRRP
Ga0210378_103576621	3300021073	Groundwater Sediment	MWQRAVRIGGYVLIGFVIGSLILGTIKGNSFLTNVVYGLWTGAIAGAVVAILVFGVLAARGRQ
Ga0207653_100723312	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MWQRAVRIGGYVLIGFVVGSLILGTIKGNSFLTNVVYGLWTGAIAGAIVGVLVFGVLAARRRS
Ga0207684_100163685	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MWQRAVRIGGYVLIGFVVGSLILGTIKGNSFLTNVVYGLWTGAIAGAIVGVLVFGVLAARRRP
Ga0207684_108227082	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MWQRAVRIGGYVLIGFVIGSLILGTIKGNPFLTNVVYGLWTGAIAGAIVGVLVFGVLAARRRS
Ga0207700_104557042	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MWQRAVRIGGYVLIGFVIGSLILGTIKGNPFLTNVVYGLWTGAIAGAIVGVLVFGVLAVRRRS
Ga0209234_10871012	3300026295	Grasslands Soil	MWQRAVRIGGYVLIGFVIGSLILGTIKGNSFLTNVVYGLWTGAIAGAIVGVLVFAVLAVRRRT
Ga0209265_12199362	3300026308	Soil	MWQRAVRIGGYVLIGFVIGSLILGTIKGNSFLTNVVYGLWTGAIAGAIAGILVFGVLAVRRRL
Ga0209239_13580132	3300026310	Grasslands Soil	MWQRAVRIGGYVLIGFVIGSLILGTIKGNSFLTNVVYGLWTGAIAGAIVGILVFGALAVRRRP
Ga0209056_100707624	3300026538	Soil	MWQRAVRIGGYVLIGFVIGSLILGTIKGNPFLTNVVYGLWTGAIAGAIVGVLVFGVLAVRRRP
Ga0209648_106922202	3300026551	Grasslands Soil	MWQRAVRIGGYVLIGFVIGSLILGAIKGNSFLTNVVYGLWTGAIAGAIVGVLVFGVLRVRRRP
Ga0179587_103917312	3300026557	Vadose Zone Soil	MWQRAVRIGGYVLIGFVIGSLILGTIKGNSFVTNVVYGLWTGAIAGAIVGVLVFGVLAVRRRP
Ga0207981_11048362	3300027560	Soil	MWQRAVRIGGYVLIGFVIGSLILGTIKGNSFLTNVVYGLWTGAIAGAIVGILVFGVLAVRGRQ
Ga0208991_10599972	3300027681	Forest Soil	MWQRAVRIGGYVLIGFVIGSLILGTIKGNSFVTNVVYGLWTGAIAGAIVGVLVFGVLAVRRRS
Ga0208989_101149282	3300027738	Forest Soil	MWQRAVRIGGYVLIGFVIGSLILGTIKGNSFLTNVVYGLWTGAIAGAIVGVLVFGVLAVRRRP
Ga0209814_100009831	3300027873	Populus Rhizosphere	MWRRAVRIGGYVLIGFVIGSLILGTIKGNPFLTNVVYGLWTGAIAGAIVGVLVFGVLAARRRP
Ga0209814_100019752	3300027873	Populus Rhizosphere	MWQRAVRIGGYVLIGFVIGSLILGTIKGNAFLTNVVYGLWTGAIAGAIVAILVFGVLAVRGRQ
Ga0209481_100498583	3300027880	Populus Rhizosphere	MWQRAVRIGGYVLIGFVIGSLILGTIKGNPFLTNVVYGLWTGAIAGAIVGVLVFGVLTVRRRS
Ga0209488_107567361	3300027903	Vadose Zone Soil	VWRRPVRIGGYVLIGFVVGSLILGTIKGNSFVTNVVYGLWTGAIAGAIVGVLVFGVLAVRRRP
Ga0209382_100963524	3300027909	Populus Rhizosphere	MWQRAVRIGGYVLVGFVIGSLILGTIKGNAFLTNVVYGLWTGAIAGVIVGILVFGVLAVRSRR
Ga0307320_102551162	3300028771	Soil	MPQRRPIRVGVYVLFGFVIGSLILGTAKGNSFVDNLVYGIWTGALAGLVVGLLLAAVEARRR
Ga0307323_100803431	3300028787	Soil	GYVLIGFVIGSLILGTIKGNSFLTNVVYGLWTGAIAGAVVAILVFGVLAARGRQ
Ga0307323_101564381	3300028787	Soil	MWQRAVRIGGYVLIGFVIGSLILGTIKGNSFLTNVVYGLWTGAIAGAVVAILVFGVLA
Ga0307323_103493182	3300028787	Soil	VWQRAVRIGGYVLIGFVVGSLILGTIKGNSFLTNVVYGLWTGAIAGAIVAILVFGVLAVRRRQ
Ga0299907_109756032	3300030006	Soil	MTQRALRVALYVVGGFVVGSLALGTIKGNPFVDNLIYGLWTGALAGAVVGAAVYLLRRR
Ga0247826_111083611	3300030336	Soil	MWQRAVRIGVYVLIGFVIGSLILGTIKGNGFLTNVVYGLWTGAIAGVIVGILVFGVLAVRNRQ
Ga0247829_111491811	3300033550	Soil	MWQRAVRIGGYVLVGFVIGSLILGTIKGNAFLTNVVYGLWTGAIAGAIVAILVFG
Ga0372946_0124314_428_619	3300034384	Soil	MWKRALRIGVYVLIGFVVGSLILGTAKGNAFADNIVYGLWTGAIAGAVVAVIVLAVLSARGRA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F063989

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences