Metagenome / Metatranscriptome Family F063950

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F063950
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	43 residues
Representative Sequence	MRDQAIGQPDVRSLALAEPTQHVRHRWIIGLTLASLGMWMATQ
Number of Associated Samples	114
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	79.07 %
% of genes near scaffold ends (potentially truncated)	99.22 %
% of genes from short scaffolds (< 2000 bps)	93.02 %
Associated GOLD sequencing projects	107
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (79.070 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (21.705 % of family members)
Environment Ontology (ENVO)	Unclassified (17.829 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.364 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.48% β-sheet: 0.00% Coil/Unstructured: 53.52%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF02771	Acyl-CoA_dh_N	44.19
PF00583	Acetyltransf_1	13.18
PF13581	HATPase_c_2	2.33
PF03551	PadR	1.55
PF13673	Acetyltransf_10	1.55
PF03109	ABC1	1.55
PF03029	ATP_bind_1	0.78
PF02687	FtsX	0.78
PF00905	Transpeptidase	0.78
PF00082	Peptidase_S8	0.78
PF00296	Bac_luciferase	0.78
PF12679	ABC2_membrane_2	0.78
PF00005	ABC_tran	0.78
PF01717	Meth_synt_2	0.78
PF12323	HTH_OrfB_IS605	0.78
PF08281	Sigma70_r4_2	0.78
PF05223	MecA_N	0.78
PF13635	DUF4143	0.78
PF04030	ALO	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	44.19
COG0661	Predicted protein kinase regulating ubiquinone biosynthesis, AarF/ABC1/UbiB family	Signal transduction mechanisms [T]	1.55
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	1.55
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	1.55
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	1.55
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.78
COG0620	Methionine synthase II (cobalamin-independent)	Amino acid transport and metabolism [E]	0.78
COG1100	GTPase SAR1 family domain	General function prediction only [R]	0.78
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.78
COG2229	Signal recognition particle receptor subunit beta, a GTPase	Intracellular trafficking, secretion, and vesicular transport [U]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	79.07 %
Unclassified	root	N/A	20.93 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	79.07 %
Unclassified	root	N/A	20.93 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	79.07 %
Unclassified	root	N/A	20.93 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	59.69 %
Unclassified	root	N/A	20.93 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.55 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	59.69 %
Unclassified	root	N/A	20.93 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.55 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	34.88 %
Unclassified	root	N/A	20.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.55 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.93 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	20.16 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	1.55 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.55 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.93 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	20.16 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	1.55 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.55 %
unclassified Acidimicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.93 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	20.16 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	1.55 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.55 %
Acidimicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.93 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	20.16 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	1.55 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.55 %
Acidimicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352025\|deepsgr__Contig_143734	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300000567\|JGI12270J11330_10254485	Not Available	564	Open in IMG/M
3300000955\|JGI1027J12803_106872147	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300001356\|JGI12269J14319_10293614	Not Available	588	Open in IMG/M
3300003505\|JGIcombinedJ51221_10019639	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2354	Open in IMG/M
3300004091\|Ga0062387_100300372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1034	Open in IMG/M
3300004092\|Ga0062389_100371733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1536	Open in IMG/M
3300004092\|Ga0062389_104456977	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	527	Open in IMG/M
3300004152\|Ga0062386_101040730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	679	Open in IMG/M
3300004635\|Ga0062388_102426024	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300005445\|Ga0070708_101993797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	537	Open in IMG/M
3300005467\|Ga0070706_100167706	All Organisms → cellular organisms → Bacteria	2050	Open in IMG/M
3300005560\|Ga0066670_10749181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	592	Open in IMG/M
3300005569\|Ga0066705_10414311	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	844	Open in IMG/M
3300005610\|Ga0070763_10049313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1997	Open in IMG/M
3300005842\|Ga0068858_101514719	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	661	Open in IMG/M
3300006052\|Ga0075029_100776552	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	651	Open in IMG/M
3300006174\|Ga0075014_100566463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	645	Open in IMG/M
3300006755\|Ga0079222_11130436	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	692	Open in IMG/M
3300006854\|Ga0075425_102346197	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	592	Open in IMG/M
3300006904\|Ga0075424_101940061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	622	Open in IMG/M
3300009093\|Ga0105240_11295434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	769	Open in IMG/M
3300009520\|Ga0116214_1168262	Not Available	819	Open in IMG/M
3300009522\|Ga0116218_1270933	Not Available	762	Open in IMG/M
3300009683\|Ga0116224_10240529	Not Available	864	Open in IMG/M
3300009698\|Ga0116216_10246067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	1093	Open in IMG/M
3300009792\|Ga0126374_11039805	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300009824\|Ga0116219_10225896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	1067	Open in IMG/M
3300010047\|Ga0126382_11859307	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300010322\|Ga0134084_10211846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	683	Open in IMG/M
3300010358\|Ga0126370_10918689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	792	Open in IMG/M
3300010360\|Ga0126372_11110277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	810	Open in IMG/M
3300010373\|Ga0134128_11185186	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	843	Open in IMG/M
3300010379\|Ga0136449_100505655	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2096	Open in IMG/M
3300010379\|Ga0136449_100905172	All Organisms → cellular organisms → Bacteria	1437	Open in IMG/M
3300010379\|Ga0136449_104063326	Not Available	545	Open in IMG/M
3300010876\|Ga0126361_10690462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1635	Open in IMG/M
3300012205\|Ga0137362_11548857	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M
3300012210\|Ga0137378_11793107	Not Available	518	Open in IMG/M
3300012356\|Ga0137371_10894923	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300012359\|Ga0137385_10582273	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	942	Open in IMG/M
3300012514\|Ga0157330_1034951	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	649	Open in IMG/M
3300012960\|Ga0164301_10215797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1235	Open in IMG/M
3300015264\|Ga0137403_11394673	Not Available	549	Open in IMG/M
3300015356\|Ga0134073_10236697	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300015373\|Ga0132257_104066299	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300016319\|Ga0182033_11018438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	737	Open in IMG/M
3300016357\|Ga0182032_10817425	All Organisms → cellular organisms → Bacteria	788	Open in IMG/M
3300017822\|Ga0187802_10280320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	648	Open in IMG/M
3300017823\|Ga0187818_10364735	Not Available	639	Open in IMG/M
3300017926\|Ga0187807_1067752	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1110	Open in IMG/M
3300017937\|Ga0187809_10435593	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300017955\|Ga0187817_10149163	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1486	Open in IMG/M
3300017970\|Ga0187783_10296974	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1178	Open in IMG/M
3300017972\|Ga0187781_11258425	Not Available	545	Open in IMG/M
3300017975\|Ga0187782_10434118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1000	Open in IMG/M
3300018001\|Ga0187815_10210995	Not Available	822	Open in IMG/M
3300018062\|Ga0187784_10656613	Not Available	841	Open in IMG/M
3300018086\|Ga0187769_10465399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	953	Open in IMG/M
3300018468\|Ga0066662_12724759	Not Available	523	Open in IMG/M
3300019787\|Ga0182031_1554296	Not Available	1727	Open in IMG/M
3300020581\|Ga0210399_10070565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2828	Open in IMG/M
3300020581\|Ga0210399_10579906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	929	Open in IMG/M
3300020582\|Ga0210395_10342942	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1124	Open in IMG/M
3300021384\|Ga0213876_10073319	Not Available	1808	Open in IMG/M
3300021401\|Ga0210393_11360733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	568	Open in IMG/M
3300021403\|Ga0210397_11577546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	510	Open in IMG/M
3300021405\|Ga0210387_10072454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2821	Open in IMG/M
3300021405\|Ga0210387_10758281	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	858	Open in IMG/M
3300021433\|Ga0210391_10582749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	878	Open in IMG/M
3300021474\|Ga0210390_10265529	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1454	Open in IMG/M
3300021474\|Ga0210390_11425140	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300021477\|Ga0210398_10331493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	1241	Open in IMG/M
3300022532\|Ga0242655_10300134	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300025634\|Ga0208589_1110799	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	641	Open in IMG/M
3300025928\|Ga0207700_10648249	Not Available	941	Open in IMG/M
3300025929\|Ga0207664_11079003	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300026023\|Ga0207677_10880488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	806	Open in IMG/M
3300026142\|Ga0207698_10431528	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1267	Open in IMG/M
3300026490\|Ga0257153_1076337	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300027604\|Ga0208324_1209939	Not Available	514	Open in IMG/M
3300027857\|Ga0209166_10407944	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	705	Open in IMG/M
3300027879\|Ga0209169_10452480	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	675	Open in IMG/M
3300027884\|Ga0209275_10422046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	754	Open in IMG/M
3300028072\|Ga0247675_1045329	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300028709\|Ga0307279_10086441	Not Available	566	Open in IMG/M
3300030494\|Ga0310037_10207643	Not Available	865	Open in IMG/M
3300030580\|Ga0311355_10757209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	896	Open in IMG/M
3300030706\|Ga0310039_10110249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1143	Open in IMG/M
3300031184\|Ga0307499_10171726	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300031234\|Ga0302325_12836932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	566	Open in IMG/M
3300031564\|Ga0318573_10594139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	596	Open in IMG/M
3300031572\|Ga0318515_10725330	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300031708\|Ga0310686_102415804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1572	Open in IMG/M
3300031708\|Ga0310686_114209852	Not Available	923	Open in IMG/M
3300031708\|Ga0310686_114969352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1134	Open in IMG/M
3300031715\|Ga0307476_11391245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	511	Open in IMG/M
3300031724\|Ga0318500_10322970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	759	Open in IMG/M
3300031744\|Ga0306918_11251853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	572	Open in IMG/M
3300031747\|Ga0318502_10401491	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	815	Open in IMG/M
3300031747\|Ga0318502_10910990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	535	Open in IMG/M
3300031753\|Ga0307477_10452479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	876	Open in IMG/M
3300031765\|Ga0318554_10202512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1130	Open in IMG/M
3300031768\|Ga0318509_10182625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1164	Open in IMG/M
3300031769\|Ga0318526_10173547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	879	Open in IMG/M
3300031805\|Ga0318497_10544921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	650	Open in IMG/M
3300031805\|Ga0318497_10848768	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300031846\|Ga0318512_10587118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	568	Open in IMG/M
3300031859\|Ga0318527_10302590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	681	Open in IMG/M
3300031879\|Ga0306919_10189603	Not Available	1522	Open in IMG/M
3300031890\|Ga0306925_11678671	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300031910\|Ga0306923_10114147	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3058	Open in IMG/M
3300031910\|Ga0306923_10943473	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	942	Open in IMG/M
3300031938\|Ga0308175_100722029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1084	Open in IMG/M
3300032059\|Ga0318533_10540228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	855	Open in IMG/M
3300032076\|Ga0306924_10005379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	12605	Open in IMG/M
3300032160\|Ga0311301_10793794	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1303	Open in IMG/M
3300032261\|Ga0306920_100496854	Not Available	1810	Open in IMG/M
3300032770\|Ga0335085_11759244	Not Available	636	Open in IMG/M
3300032770\|Ga0335085_12341089	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300032805\|Ga0335078_12731033	Not Available	502	Open in IMG/M
3300032828\|Ga0335080_10689762	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1065	Open in IMG/M
3300032828\|Ga0335080_12124010	Not Available	541	Open in IMG/M
3300032892\|Ga0335081_10117709	All Organisms → cellular organisms → Bacteria	3893	Open in IMG/M
3300032892\|Ga0335081_11206141	Not Available	862	Open in IMG/M
3300032892\|Ga0335081_11293620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	823	Open in IMG/M
3300033134\|Ga0335073_12097579	Not Available	512	Open in IMG/M
3300033158\|Ga0335077_10058661	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4647	Open in IMG/M
3300033290\|Ga0318519_10952011	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.80%
Host-Associated	Host-Associated	6.20%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.72%
Aquatic	Environmental → Aquatic	10.08%
Plants	Host-Associated → Plants	6.20%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.17%
Freshwater	Environmental → Aquatic → Freshwater	8.53%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.10%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.33%
Sediment	Environmental → Aquatic → Sediment	1.55%
Peat	Environmental → Terrestrial → Peat	1.55%
Roots	Host-Associated → Plants → Roots	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	63.57%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	12.40%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	8.53%
Loam	Environmental → Terrestrial → Soil → Loam	6.20%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.55%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	30.23%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.91%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	11.63%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.65%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.10%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.10%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.10%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.55%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.55%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.78%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.78%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.78%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.71%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	10.85%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	7.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.43%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.65%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.10%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.88%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.88%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.33%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.33%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.33%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.55%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.55%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.55%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.55%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.78%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.78%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.78%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.78%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.78%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.78%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.78%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012514	Unplanted soil (control) microbial communities from North Carolina - M.Soil.1.old.130510	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019787	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025634	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300028072	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK16	Environmental	Open in IMG/M
3300028709	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_118	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deepsgr_02348120	2199352025	Soil	MRDQTVGPADALSLALAEPDRHVRHRWILGLTLASLGMW
JGI12270J11330_102544851	3300000567	Peatlands Soil	MRDQAIGQPDVSSLALAEPTRHVRHRWIVGLTLASLGMWMAN
JGI1027J12803_1068721472	3300000955	Soil	MRDQTVGPADALSLALAEPDQHVRRRWILGLTLASLG
JGI12269J14319_102936142	3300001356	Peatlands Soil	MRDQAIGQPDVSSLALAEPTRHVRHRWIVGLTLASLGMWMA
JGIcombinedJ51221_100196394	3300003505	Forest Soil	MRHDPAMADQVIGQPDVQSLALAEPTQQVRIRWIVTLTLASLG
Ga0062387_1003003723	3300004091	Bog Forest Soil	MDQAIGQTQPQSLALAEPTQHVRVRWIITLTLASLGMWMANQTPSQV
Ga0062389_1003717331	3300004092	Bog Forest Soil	MDQAISQPEVQSLALAEPTQHVRIRWIITLTLASLGMWMANQ
Ga0062389_1044569772	3300004092	Bog Forest Soil	MADQAISQPDVQSLALAEPTQHVRVRWIVVLTLASLGMWMANQTPSQVLLAL
Ga0062386_1010407302	3300004152	Bog Forest Soil	MRDQVIGQPDVHSPALAEPTQHVRSRWITGLALASLGMWM
Ga0062388_1024260242	3300004635	Bog Forest Soil	MRDQAIGQPGVGSLALAEPTQYVRYRWITGLALASLGMWMATQT
Ga0070708_1019937971	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MIHVMRDLTIGQADALSLALAEPDQHVRHRWILGLTLASLGMWMATQTPLQVM
Ga0070706_1001677063	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MADQVIGQPDVQSLALAEPTQHVRVRWLFGLTLASLGMWMA
Ga0066670_107491811	3300005560	Soil	MRDQTVGPADALSLALAEPDQHVRRRWILGLTLASLGMWMATQTPLQ
Ga0066705_104143111	3300005569	Soil	MRETIGQADALSLALAEPDQHVRHRWILGLTLASLGMWMATQTPLQVMLA
Ga0070763_100493131	3300005610	Soil	VRDQAIGQPDAASLALAEPTKFVRNRWVIGLTLASLGMWMA
Ga0068858_1015147191	3300005842	Switchgrass Rhizosphere	MRDQTVGPADALSLALAEPDQHVRRRWILGLTLASL
Ga0075029_1007765521	3300006052	Watersheds	MRDQAIGQPDVSSLALAEPTRHVRHRWIVGLTLASLGMWMANQT
Ga0075014_1005664632	3300006174	Watersheds	MADQAIGQPQVQSLALAEPDQHVRIRWIVYLTLASLGMWMANQTPS
Ga0079222_111304362	3300006755	Agricultural Soil	MRETIGQADALSLALAEPDQHVRHRWILGLTLASLGMWMATQTPLQVMLALQLQD
Ga0075425_1023461972	3300006854	Populus Rhizosphere	MTDQTIGQPDVQSLALAEPTEHVRRRWVFGLTLASLGMWMATQTP
Ga0075424_1019400612	3300006904	Populus Rhizosphere	MRDQTIGQADALSRALAEPTEHVRRRWVFGLALASLGMWMATQTP
Ga0105240_112954342	3300009093	Corn Rhizosphere	MRDQTVGPADALSLALAEPDQHVRRRWILGLTLASLGMW
Ga0116214_11682622	3300009520	Peatlands Soil	MRDEAIGRPDVGSLALAEPTVHVRPRWIVGLTLAMLG
Ga0116218_12709331	3300009522	Peatlands Soil	MRDQAIGQPDVSSLALAEPTRHVRHRWIVGLTLASLGMWLANQTP
Ga0116224_102405291	3300009683	Peatlands Soil	MRDQAIGQPDVSSLALAEPTRHVRRRWIVGLTLASLGMWM
Ga0116216_102460672	3300009698	Peatlands Soil	MRDQAIGQPDVSSLALAEPTRHVRRRWIVGLTLASLG
Ga0126374_110398051	3300009792	Tropical Forest Soil	MTDQTIGQPDVLSLALAEPTQHVRRGWIVGLTLASLGMWMA
Ga0116219_102258961	3300009824	Peatlands Soil	MRDQAIGQPDVSSLALAEPTRHVRRRWIVGLTLASLGMWMANQT
Ga0126382_118593071	3300010047	Tropical Forest Soil	MSDQVIGPPDVQSPALAEPTQHVRYRWIVGLTLASLGMWM
Ga0134084_102118461	3300010322	Grasslands Soil	MRETIGQADALSLALAEPDQHVRHRWILGLTLASL
Ga0126370_109186891	3300010358	Tropical Forest Soil	MRDQTVGPADALSLALAEPDQHVRHRWILGLTLASLGMWMAMQ
Ga0126372_111102772	3300010360	Tropical Forest Soil	MRHDLGDEGVMRDQTVGPADALSLALAEPDQHVRHRWILGLTLASLGMWMA
Ga0134128_111851862	3300010373	Terrestrial Soil	MRDQTIGPPDVQSLALAEPTEHVRHRWVYGLTLASLGMWMATQTPQ
Ga0136449_1005056551	3300010379	Peatlands Soil	MRDQAIGQPDVSSLALAEPTRHVRHRWIVGLTLAS
Ga0136449_1009051721	3300010379	Peatlands Soil	MRDQAIGQPEVSSLALAEPTRHVRRRWIVGLTLASLGMWMANQT
Ga0136449_1040633262	3300010379	Peatlands Soil	MRDQAIGQPDLSLALAEPTQHVRRRWIIGLTLASLGMWMATQTP
Ga0126361_106904623	3300010876	Boreal Forest Soil	MADQVIGQPDVQSLALAEPTQQVRVRWIVTLTLASLGMWMANQTPSQVLLALQL
Ga0137362_115488571	3300012205	Vadose Zone Soil	MRHHPAMADQVIGQPDVQSLALAEPTQHVRIRWIIGLTLASL
Ga0137378_117931072	3300012210	Vadose Zone Soil	MRDQTIGQADALSLALAEPDQHVRHRWILGLTLASLGMWMA
Ga0137371_108949232	3300012356	Vadose Zone Soil	MRDQTTGQADALSLALAEPDQHVRHRWILGLTLASLGMWMATQTPLQV
Ga0137385_105822731	3300012359	Vadose Zone Soil	MRDQVIGQPDVSSLALAEPIQHVRHRWVIGLTLASLG
Ga0157330_10349512	3300012514	Soil	MRDQAVGPADALSLALAEPDQHVRHRWILGLTLASLG
Ga0164301_102157971	3300012960	Soil	MRDQTVGQADALSLALAEPDQHVRRRWILGLTLASLGMWMA
Ga0137403_113946731	3300015264	Vadose Zone Soil	MGDQTIGQPGVQSLALAEPTEHVRRRWIFGLALASL
Ga0134073_102366971	3300015356	Grasslands Soil	MRDQTVGPADALSLALAEPDQHVRRRWILGLTLASLGM
Ga0132257_1040662991	3300015373	Arabidopsis Rhizosphere	MSDQAIGQQDVQSLARAEPTQHVRYRWIVGLTLASLGMWMATQT
Ga0182033_110184382	3300016319	Soil	MSDQAIGQPDVQSLALAEPTQHVRYRWIVGLTLASLGMWMATQTP
Ga0182032_108174252	3300016357	Soil	MSDQVIGQPDVQSLALAEPTRHVRYRWIVGLTLASLGMWMATQ
Ga0187802_102803202	3300017822	Freshwater Sediment	VADQVVGQPKVQSLALAEPSQHVRIRWIIWLTLASLGMWMA
Ga0187818_103647352	3300017823	Freshwater Sediment	MRDQAIGQPDVSSLALAEPTRHVRHRWIVGLTLASLGMWM
Ga0187807_10677521	3300017926	Freshwater Sediment	MGQAISQPDVQSLALAEPNQHVRIRWIIYLTLASLGMWMATQ
Ga0187809_104355931	3300017937	Freshwater Sediment	MSDQVIGQPGVQSPALAEPTQHVRYRWIVGLTLASL
Ga0187817_101491634	3300017955	Freshwater Sediment	MDQAISQPDVRSPALAEPTEHVRIRWILGLTLASLGMWMANQTPSQV
Ga0187783_102969743	3300017970	Tropical Peatland	MRDEAIGRPDADSRALAEPVQFVRYRWILGLSLASLGMWMANQTPSQVMLAL
Ga0187781_112584252	3300017972	Tropical Peatland	MRDQVIGQQDALTLALAEPTRHVRYRWIFGLTLASLGMWMATQTPL
Ga0187782_104341183	3300017975	Tropical Peatland	MRDQAIGEPDVRSLALAEPTRHVRYGWIIGLTLASLGMWMATQTPL
Ga0187815_102109952	3300018001	Freshwater Sediment	MRDEAIDRPDVRSLALAEPTTHVRPRWIVGLTLAMLGMWMA
Ga0187784_106566131	3300018062	Tropical Peatland	MRDEAIGRTGVRSLALAEPTNHVRNRWIVGLVLASLGMWMANQTPSQ
Ga0187769_104653992	3300018086	Tropical Peatland	MRHDPAMRDQAIGQPDVASLALAEPTRHVRYRWITGLTLASLGM
Ga0066662_127247591	3300018468	Grasslands Soil	MRETIGQADALSLALAEPDQHVRHRWILGLTLASLGMWMATQTP
Ga0182031_15542962	3300019787	Bog	MRDQARGQPDVLSLALAEPTQHVRYRWITGLSLASLGM
Ga0210399_100705651	3300020581	Soil	MADQVIGQPDVQSLALAEPTQHVRIRWIVTLTLASLGMWMANQTPSQVML
Ga0210399_105799062	3300020581	Soil	MSDQTIGQPDVQSLALAEPTQHVRYRWIVGLTLASLGMWMATQTPLQGML
Ga0210395_103429422	3300020582	Soil	MRETIGQADALSLALAEPDQHVRRRWILGLTLASLGMWMATQTP
Ga0213876_100733192	3300021384	Plant Roots	MSDQTVGQEDVQPAALAEPIQYVRYRWISGLTLASLGMWMATQTPL
Ga0210393_113607331	3300021401	Soil	MRHDPAMADQVIGQPGVQSLALAEPTQQVRIRWIV
Ga0210397_115775462	3300021403	Soil	MADQVIGQPDVQSLALAEPTQHVRIRWIVTLTLASLGMWMANQTPSQVMLALQMQ
Ga0210387_100724541	3300021405	Soil	MADQVIGQPDVQSLALAEPTQHVRIRWIVTLTLASLGMWMANQTPSQVMLALQMQAIT
Ga0210387_107582811	3300021405	Soil	MADQVIGQPGVQSLALAEPTQQVRIRWIVTLTLASL
Ga0210391_105827492	3300021433	Soil	MRDQEIGQADVGSLALAEPTQHVRIRWIVTLTLASVGMWMANQTPSQVLLALQLQDI
Ga0210390_102655291	3300021474	Soil	MRHDPAMADQAISQPDVQSLALAEPTQHVRVRWIF
Ga0210390_114251402	3300021474	Soil	MSDQTIGQEDVQSLALAEPTQHVRYRWIVGLTLASLGMWMA
Ga0210398_103314931	3300021477	Soil	MAMRDDAIGQREVVSRALAEPDQHVRYRWIIGLTLASLGMW
Ga0242655_103001341	3300022532	Soil	DALSLALAEPDQHVRHRWILGLTLASLGMWMATQTPLQVMLALNMPVPYCVY
Ga0208589_11107991	3300025634	Arctic Peat Soil	MADQVIGQPGVQSLALAEPTQHVRVRWIITLTLASLGMWMANQTPSQVMLALQLQD
Ga0207700_106482492	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MRDQTIGPPDVQSLALAEPTEHVRHRWVFGLTLASLGMWMA
Ga0207664_110790032	3300025929	Agricultural Soil	MRDQTVGPADALSLALAEPDQHVRRRWILGLTLASLGMWMA
Ga0207677_108804881	3300026023	Miscanthus Rhizosphere	MRDQTVGPADALSLALAEPDQHVRRHWILGLTLASL
Ga0207698_104315282	3300026142	Corn Rhizosphere	MRDQTVGPADALSLALAEPDQHVRRRWILGLTLASLGMWM
Ga0257153_10763371	3300026490	Soil	MRPSYVMIWVMRDQTIGQADALSLALAEPDQHVRRRWILGLTLASLGMWMATQTPLQ
Ga0208324_12099391	3300027604	Peatlands Soil	MRDQAIGQPDVSSLALAEPTRHVRHRWIVGLTLASLGMWLANQ
Ga0209166_104079441	3300027857	Surface Soil	MADQVIGQPDVQSLALAEPTQQVRVRWIVTLTLASLGMWMANQTP
Ga0209169_104524801	3300027879	Soil	MRHDPAMADQVVGQSDVQSLALAEPTQHVRIRWIFTLTLASLGMWMANQTPSQVMLAL
Ga0209275_104220462	3300027884	Soil	MRHDPAMADQAISQPDVQSLALAEPTQHVRIRWIFGLTLAS
Ga0247675_10453291	3300028072	Soil	MRDQTVGPADALSLALAEPDQHVRRRWILGLTLASLGMWMATQ
Ga0307279_100864411	3300028709	Soil	MRDQTVGQADALSLALAEPDQHVRRRWILGLTLASLGM
Ga0310037_102076431	3300030494	Peatlands Soil	MAAMRDQAIGQPDVSSLALAEPTRHVRRRWIVGLTLAS
Ga0311355_107572092	3300030580	Palsa	VRDQAIGQADVGSLALAEPTQFVRYRWVIGLTLASLGMWMA
Ga0310039_101102491	3300030706	Peatlands Soil	MDQAISQPDVQSLALAEPAEHVRIRWILGLTLASLGMWMANQTPSQVML
Ga0307499_101717262	3300031184	Soil	MRDQTIGQADALSLALAEPDRHVRHRWILGLTLASLGMWMAAQ
Ga0302325_128369321	3300031234	Palsa	MADQAISQPNVQSPALAEPTQHVRVRWIVVLTLASLGM
Ga0318573_105941391	3300031564	Soil	MADQVVGQPQAQSLALAEPDQHVRVRWIGYLTLASLGMWMA
Ga0318515_107253301	3300031572	Soil	MSGQVIGQPGVQSLALAEPTKHVRHRWIVGLTLASLGMW
Ga0310686_1024158043	3300031708	Soil	MRHDPAMDQAIGQAQSLALAEPTQHVRIRWIGTLTLASLGMWMANQTPSQVMLALQMQDI
Ga0310686_1142098521	3300031708	Soil	MRDEAIGRPDVQSLALAEPTTHVRPRWIIGLTLAMLGMWMAVQAPSQVVLA
Ga0310686_1149693522	3300031708	Soil	MSDQVIGQPDVRSMALAEPTVYVRYRWIVGLTLASLGMWMANQT
Ga0307476_113912451	3300031715	Hardwood Forest Soil	MRHDPAMADQAISQPDVQSLALAEPTQHVRVRWIVVLTLASLGMWMANQ
Ga0318500_103229702	3300031724	Soil	VADQVIGQPEVQSLALAEPTRHVRIRWIIGLTLASLG
Ga0306918_112518531	3300031744	Soil	MADQVIGQPQAQSLALAEPDQHVRIRWISYLTLAS
Ga0318502_104014912	3300031747	Soil	MSDQVIGQPDVQSLALAEPTQHVRYRWIVGLTLASLG
Ga0318502_109109902	3300031747	Soil	MDQAIGQPDVQSLALAEPNQHVRIRWIIYLTLASLGMWMATQTPLQVV
Ga0307477_104524791	3300031753	Hardwood Forest Soil	MADQVVGQPQVQSLALAEPTQHVRVRWIITLTLASLGMW
Ga0318554_102025123	3300031765	Soil	MADQVIGHPELHSLALAEPTRHVRIRWIICLALASLGM
Ga0318509_101826253	3300031768	Soil	MADQVIGQPEVQSLALAEPTRHVRIRWIIGLTLAIHMPR
Ga0318526_101735472	3300031769	Soil	MADQVVGQPQAQSLALAEPDQHVRVRWIGYLTLASLGMWMAVQTPSQV
Ga0318497_105449212	3300031805	Soil	MADQVIGHPELHSLALAEPTRHVRIRWIICLALASLGMSMATQTPLQ
Ga0318497_108487682	3300031805	Soil	MRDQVVGQPGAPSLALAEPTRHVRYRWIVGLTLASLGMWMAT
Ga0318512_105871181	3300031846	Soil	MADQVIGHPELHSLALAEPTRHVRIRWIICLALASLGMSMATQT
Ga0318527_103025902	3300031859	Soil	MDQAISQPDVQSLALAEPDQHVRIRWIIYLTLASLGMWMATQTPL
Ga0306919_101896031	3300031879	Soil	MSDQVIGQPGVQSPALAEPTQHVRYRWIVGLTLAS
Ga0306925_116786712	3300031890	Soil	MSDQVIGQPGVQSPALAEPTQHVRYRWIVGLTLASLGMWMATQTP
Ga0306923_101141475	3300031910	Soil	VADQVIGQPEVQSLALAEPTRHVRIRWIIGLTLASLGMWMAT
Ga0306923_109434731	3300031910	Soil	MDQAIGQPDVQSLALAEPNQHVRIRWIIYLTLASLGMWMATQTPLQV
Ga0308175_1007220292	3300031938	Soil	MRDQTIGQPDVQSLALAEPTEHVRRRWIFGLTLASLGMWMATQ
Ga0318533_105402282	3300032059	Soil	VADQVIGQPEVQSLALAEPTRHVRIRWIICLTLASLGMWMATQTPL
Ga0306924_100053791	3300032076	Soil	MSGQVIGQPGVQSLALAEPTKHVRHRWIVGLTLASLGMWMAT
Ga0311301_107937943	3300032160	Peatlands Soil	MRAQAIGRPDVGSLALAEPTQHVRIRWIVTLTLASLGMWMANQT
Ga0306920_1004968542	3300032261	Soil	MSDQAIGQPGVQSPALAEPTQHVRYRWIVGLTLASLGMWMATQTP
Ga0335085_117592441	3300032770	Soil	MRDQAIGQPDVRSLALAEPTQHVRHRWIIGLTLASLGMWMATQ
Ga0335085_123410891	3300032770	Soil	MSDQVIGQPGVQSPALAEPTRHVRYRWIVGLTLAG
Ga0335078_127310331	3300032805	Soil	MSDQVIGQPGVQSPALAEPTRHVRHRWIVGLTLASL
Ga0335080_106897622	3300032828	Soil	MRDQAIGQPGTRSLALAEPTQHVRYRWITGLTLASLGMWMANQTP
Ga0335080_121240102	3300032828	Soil	MSDQVVGQPGLQSLALAEPTRHVRYRWIVGLTLASLGMWMATQ
Ga0335081_101177094	3300032892	Soil	MRDQAVGQPDVRSLALAEPTQHVRYRWITGLTLASLGMWMANQTPSQVMLALQLQD
Ga0335081_112061411	3300032892	Soil	MSDQAIGQQEVQSRALAEPTKHVRRRWIVGLTLASLGMWM
Ga0335081_112936202	3300032892	Soil	MSDQVVGQPGLQSLALAEPTRHVRYRWIVGLTLASLGMWMA
Ga0335073_120975791	3300033134	Soil	MSDQTIGQPDVQPAALAEPTRHVKYRWITGLTLASLGMWMANQT
Ga0335077_100586611	3300033158	Soil	MRDQAIGQPGTRSLALAEPTQHVRYRWITGLTLASLGMWMANQTPSQVM
Ga0318519_109520112	3300033290	Soil	MSDQVIGQPGVQSPALAEPTQHVRYRWIVGLTLASLGMW

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F063950

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences