Metagenome / Metatranscriptome Family F063731

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F063731
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	62 residues
Representative Sequence	THTMIPNIDRSSLRNDVPFGEVVPEQRRAPGVEYGFPDADPKFGARQEEAQKWILKLWESRQK
Number of Associated Samples	114
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.38 %
% of genes near scaffold ends (potentially truncated)	94.57 %
% of genes from short scaffolds (< 2000 bps)	90.70 %
Associated GOLD sequencing projects	107
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (94.574 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (8.527 % of family members)
Environment Ontology (ENVO)	Unclassified (35.659 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (36.434 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 34.07% β-sheet: 0.00% Coil/Unstructured: 65.93%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF00528	BPD_transp_1	29.46
PF08402	TOBE_2	1.55
PF09084	NMT1	0.78
PF07883	Cupin_2	0.78
PF13714	PEP_mutase	0.78
PF00691	OmpA	0.78
PF01799	Fer2_2	0.78
PF08299	Bac_DnaA_C	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG0593	Chromosomal replication initiation ATPase DnaA	Replication, recombination and repair [L]	0.78
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.78
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.57 %
Unclassified	root	N/A	5.43 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.57 %
Unclassified	root	N/A	5.43 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.57 %
Unclassified	root	N/A	5.43 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	59.69 %
Unclassified	root	N/A	5.43 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.78 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	52.71 %
Unclassified	root	N/A	5.43 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	52.71 %
Unclassified	root	N/A	5.43 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	50.39 %
Unclassified	root	N/A	5.43 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	50.39 %
Unclassified	root	N/A	5.43 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000891\|JGI10214J12806_11059838	All Organisms → cellular organisms → Bacteria	1762	Open in IMG/M
3300000955\|JGI1027J12803_101386796	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	576	Open in IMG/M
3300003987\|Ga0055471_10077802	All Organisms → cellular organisms → Bacteria	944	Open in IMG/M
3300004070\|Ga0055488_10219269	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	521	Open in IMG/M
3300004081\|Ga0063454_101157535	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	636	Open in IMG/M
3300004463\|Ga0063356_104455569	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	602	Open in IMG/M
3300005295\|Ga0065707_10208714	All Organisms → cellular organisms → Bacteria	1275	Open in IMG/M
3300005332\|Ga0066388_103201181	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	836	Open in IMG/M
3300005332\|Ga0066388_108318531	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	517	Open in IMG/M
3300005354\|Ga0070675_101579186	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	605	Open in IMG/M
3300005356\|Ga0070674_101024672	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	725	Open in IMG/M
3300005366\|Ga0070659_100133272	All Organisms → cellular organisms → Bacteria	2019	Open in IMG/M
3300005439\|Ga0070711_101051966	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	700	Open in IMG/M
3300005440\|Ga0070705_100662016	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	815	Open in IMG/M
3300005446\|Ga0066686_10186263	All Organisms → cellular organisms → Bacteria	1386	Open in IMG/M
3300005457\|Ga0070662_100358002	All Organisms → cellular organisms → Bacteria	1197	Open in IMG/M
3300005459\|Ga0068867_101402690	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	648	Open in IMG/M
3300005536\|Ga0070697_100308356	All Organisms → cellular organisms → Bacteria	1361	Open in IMG/M
3300005578\|Ga0068854_100425701	All Organisms → cellular organisms → Bacteria	1104	Open in IMG/M
3300005614\|Ga0068856_102110596	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	573	Open in IMG/M
3300005713\|Ga0066905_101469135	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	619	Open in IMG/M
3300005836\|Ga0074470_10452417	All Organisms → cellular organisms → Bacteria	3358	Open in IMG/M
3300005842\|Ga0068858_101907651	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	587	Open in IMG/M
3300005937\|Ga0081455_10353796	All Organisms → cellular organisms → Bacteria	1035	Open in IMG/M
3300006031\|Ga0066651_10142589	All Organisms → cellular organisms → Bacteria	1249	Open in IMG/M
3300006358\|Ga0068871_102038277	All Organisms → cellular organisms → Bacteria → Proteobacteria	546	Open in IMG/M
3300006797\|Ga0066659_11895759	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	506	Open in IMG/M
3300006804\|Ga0079221_10374328	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
3300006845\|Ga0075421_100875150	All Organisms → cellular organisms → Bacteria	1027	Open in IMG/M
3300006845\|Ga0075421_101596063	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	710	Open in IMG/M
3300006847\|Ga0075431_100351581	All Organisms → cellular organisms → Bacteria	1481	Open in IMG/M
3300006865\|Ga0073934_10130334	All Organisms → cellular organisms → Bacteria	1834	Open in IMG/M
3300006954\|Ga0079219_11074939	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	678	Open in IMG/M
3300009174\|Ga0105241_11587442	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	632	Open in IMG/M
3300009553\|Ga0105249_10884432	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	960	Open in IMG/M
3300009609\|Ga0105347_1260192	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	716	Open in IMG/M
3300010029\|Ga0105074_1010120	All Organisms → cellular organisms → Bacteria	1479	Open in IMG/M
3300010043\|Ga0126380_10144041	All Organisms → cellular organisms → Bacteria	1515	Open in IMG/M
3300010043\|Ga0126380_10332461	All Organisms → cellular organisms → Bacteria	1097	Open in IMG/M
3300010047\|Ga0126382_10107384	All Organisms → cellular organisms → Bacteria	1819	Open in IMG/M
3300010047\|Ga0126382_12065302	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	544	Open in IMG/M
3300010326\|Ga0134065_10259722	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	651	Open in IMG/M
3300010336\|Ga0134071_10277406	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	838	Open in IMG/M
3300010360\|Ga0126372_10848429	All Organisms → cellular organisms → Bacteria	910	Open in IMG/M
3300010362\|Ga0126377_12981429	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	546	Open in IMG/M
3300010398\|Ga0126383_10087486	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2743	Open in IMG/M
3300010399\|Ga0134127_13235931	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	532	Open in IMG/M
3300010401\|Ga0134121_12034055	Not Available	607	Open in IMG/M
3300010401\|Ga0134121_12081054	All Organisms → cellular organisms → Bacteria → Proteobacteria	602	Open in IMG/M
3300010403\|Ga0134123_11079918	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	825	Open in IMG/M
3300011422\|Ga0137425_1039030	All Organisms → cellular organisms → Bacteria	1048	Open in IMG/M
3300011443\|Ga0137457_1249256	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	607	Open in IMG/M
3300012161\|Ga0137336_1096257	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	550	Open in IMG/M
3300012199\|Ga0137383_10527634	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300012200\|Ga0137382_10577275	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300012204\|Ga0137374_10830307	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	683	Open in IMG/M
3300012204\|Ga0137374_10830314	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	683	Open in IMG/M
3300012355\|Ga0137369_10185370	All Organisms → cellular organisms → Bacteria	1622	Open in IMG/M
3300012906\|Ga0157295_10170096	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	670	Open in IMG/M
3300012922\|Ga0137394_10374639	All Organisms → cellular organisms → Bacteria	1214	Open in IMG/M
3300012927\|Ga0137416_12176128	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	510	Open in IMG/M
3300012929\|Ga0137404_11880149	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	557	Open in IMG/M
3300012931\|Ga0153915_12316850	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	628	Open in IMG/M
3300012948\|Ga0126375_11122689	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	649	Open in IMG/M
3300012948\|Ga0126375_11137439	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	645	Open in IMG/M
3300012948\|Ga0126375_11683077	All Organisms → cellular organisms → Bacteria → Proteobacteria	549	Open in IMG/M
3300012948\|Ga0126375_11871519	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	526	Open in IMG/M
3300013296\|Ga0157374_10135979	All Organisms → cellular organisms → Bacteria	2383	Open in IMG/M
3300013296\|Ga0157374_10152550	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2247	Open in IMG/M
3300013297\|Ga0157378_10201772	All Organisms → cellular organisms → Bacteria	1881	Open in IMG/M
3300014268\|Ga0075309_1151399	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	592	Open in IMG/M
3300014884\|Ga0180104_1005352	All Organisms → cellular organisms → Bacteria → Proteobacteria	2809	Open in IMG/M
3300015256\|Ga0180073_1134441	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	534	Open in IMG/M
3300015258\|Ga0180093_1003990	All Organisms → cellular organisms → Bacteria → Proteobacteria	2639	Open in IMG/M
3300015371\|Ga0132258_12720214	All Organisms → cellular organisms → Bacteria	1234	Open in IMG/M
3300015372\|Ga0132256_101222398	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	865	Open in IMG/M
3300015372\|Ga0132256_102877312	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	579	Open in IMG/M
3300017966\|Ga0187776_10461392	All Organisms → cellular organisms → Bacteria	862	Open in IMG/M
3300018063\|Ga0184637_10044221	All Organisms → cellular organisms → Bacteria	2709	Open in IMG/M
3300018075\|Ga0184632_10261235	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	755	Open in IMG/M
3300018076\|Ga0184609_10308267	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	740	Open in IMG/M
3300018077\|Ga0184633_10308333	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300018081\|Ga0184625_10215764	All Organisms → cellular organisms → Bacteria	1005	Open in IMG/M
3300018429\|Ga0190272_10515053	All Organisms → cellular organisms → Bacteria	1021	Open in IMG/M
3300018429\|Ga0190272_10948764	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	814	Open in IMG/M
3300018465\|Ga0190269_11289147	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	583	Open in IMG/M
3300019228\|Ga0180119_1201398	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	524	Open in IMG/M
3300019362\|Ga0173479_10061693	All Organisms → cellular organisms → Bacteria	1269	Open in IMG/M
3300019889\|Ga0193743_1061618	All Organisms → cellular organisms → Bacteria → Proteobacteria	1562	Open in IMG/M
3300020186\|Ga0163153_10253610	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	841	Open in IMG/M
3300021073\|Ga0210378_10371165	All Organisms → cellular organisms → Bacteria → Proteobacteria	532	Open in IMG/M
3300025310\|Ga0209172_10370933	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	689	Open in IMG/M
3300025550\|Ga0210098_1052665	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	662	Open in IMG/M
3300025791\|Ga0210115_1070755	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	726	Open in IMG/M
3300025917\|Ga0207660_10228336	All Organisms → cellular organisms → Bacteria	1463	Open in IMG/M
3300025933\|Ga0207706_11581220	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	532	Open in IMG/M
3300025944\|Ga0207661_11919450	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	538	Open in IMG/M
3300025959\|Ga0210116_1113072	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	538	Open in IMG/M
3300026075\|Ga0207708_10363527	All Organisms → cellular organisms → Bacteria	1190	Open in IMG/M
3300026075\|Ga0207708_11588707	Not Available	575	Open in IMG/M
3300026078\|Ga0207702_11957267	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	577	Open in IMG/M
3300026089\|Ga0207648_10926787	All Organisms → cellular organisms → Bacteria → Proteobacteria	814	Open in IMG/M
3300026538\|Ga0209056_10645153	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	534	Open in IMG/M
3300027650\|Ga0256866_1213545	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	520	Open in IMG/M
3300027831\|Ga0209797_10451401	Not Available	516	Open in IMG/M
3300027909\|Ga0209382_10294125	All Organisms → cellular organisms → Bacteria	1833	Open in IMG/M
3300027910\|Ga0209583_10785702	Not Available	505	Open in IMG/M
3300030006\|Ga0299907_10256014	All Organisms → cellular organisms → Bacteria	1437	Open in IMG/M
3300031170\|Ga0307498_10038169	All Organisms → cellular organisms → Bacteria	1231	Open in IMG/M
3300031547\|Ga0310887_10564601	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	693	Open in IMG/M
3300031731\|Ga0307405_10010481	All Organisms → cellular organisms → Bacteria → Proteobacteria	4807	Open in IMG/M
3300031824\|Ga0307413_11155421	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	671	Open in IMG/M
3300031854\|Ga0310904_10455878	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	849	Open in IMG/M
3300031854\|Ga0310904_10657289	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	721	Open in IMG/M
3300031901\|Ga0307406_10279429	All Organisms → cellular organisms → Bacteria	1273	Open in IMG/M
3300031908\|Ga0310900_11092546	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	659	Open in IMG/M
3300032126\|Ga0307415_100221595	All Organisms → cellular organisms → Bacteria	1517	Open in IMG/M
3300032174\|Ga0307470_11332520	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	589	Open in IMG/M
3300032179\|Ga0310889_10194469	All Organisms → cellular organisms → Bacteria	934	Open in IMG/M
3300032205\|Ga0307472_100713270	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	904	Open in IMG/M
3300032205\|Ga0307472_101134085	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	742	Open in IMG/M
3300032828\|Ga0335080_10693852	All Organisms → cellular organisms → Bacteria	1062	Open in IMG/M
3300033408\|Ga0316605_10683424	All Organisms → cellular organisms → Bacteria	967	Open in IMG/M
3300033485\|Ga0316626_10754530	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	851	Open in IMG/M
3300034165\|Ga0364942_0179377	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	691	Open in IMG/M
3300034178\|Ga0364934_0288415	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	622	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	75.19%
Host-Associated	Host-Associated	24.81%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	55.04%
Plants	Host-Associated → Plants	24.81%
Aquatic	Environmental → Aquatic	20.16%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	53.49%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.50%
Sediment	Environmental → Aquatic → Sediment	10.85%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.53%
Freshwater	Environmental → Aquatic → Freshwater	3.88%
Marine	Environmental → Aquatic → Marine	3.88%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.55%
Floodplain	Environmental → Terrestrial → Floodplain	1.55%
Roots	Host-Associated → Plants → Roots	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.31%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	10.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.08%
Loam	Environmental → Terrestrial → Soil → Loam	8.53%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.20%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.43%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.88%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.33%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.55%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.55%
Sediment	Environmental → Aquatic → Thermal Springs → Sediment	1.55%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.55%
Lake	Environmental → Aquatic → Freshwater → Lake	0.78%
Sand	Environmental → Terrestrial → Soil → Sand	0.78%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.13%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	10.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.08%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.20%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.43%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.65%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.10%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	3.88%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.88%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.33%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.33%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.55%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.55%
Unclassified	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified	1.55%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.55%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.55%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.78%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.78%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.78%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.78%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.98%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.20%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	5.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.65%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.10%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.10%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	3.10%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	3.88%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.88%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.33%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.33%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.33%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.33%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.33%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.33%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.55%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment	1.55%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.55%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.55%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.55%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.55%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.55%
Freshwater Microbial Mat	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat	0.78%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.78%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.78%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.78%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.78%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.78%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.78%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.78%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.78%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.78%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.78%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300003987	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2	Environmental	Open in IMG/M
3300004070	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006865	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300010029	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_10_20	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011422	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT640_2	Environmental	Open in IMG/M
3300011443	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT630_2	Environmental	Open in IMG/M
3300012161	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT300_2	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012906	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014268	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D1	Environmental	Open in IMG/M
3300014884	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_1Da	Environmental	Open in IMG/M
3300015256	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT333_16_10D	Environmental	Open in IMG/M
3300015258	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT45_16_1Da	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300019228	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT790_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019889	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2c2	Environmental	Open in IMG/M
3300020186	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP6.IB-1	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300025310	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG (SPAdes)	Environmental	Open in IMG/M
3300025550	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqA_D1 (SPAdes)	Environmental	Open in IMG/M
3300025791	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025959	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D2 (SPAdes)	Environmental	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300027650	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67 HiSeq	Environmental	Open in IMG/M
3300027831	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033408	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCT	Environmental	Open in IMG/M
3300033485	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D5_A	Environmental	Open in IMG/M
3300034165	Sediment microbial communities from East River floodplain, Colorado, United States - 19_s17	Environmental	Open in IMG/M
3300034178	Sediment microbial communities from East River floodplain, Colorado, United States - 27_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10214J12806_110598381	3300000891	Soil	NWFLSKEGQTLTHTLIPNLDRASLRNDIPFGEVMPQQRRGFGKEYAFPDADPAMGEKQEEVQKWAFKLWESRQK*
JGI1027J12803_1013867961	3300000955	Soil	FLSKEGQTLTHTMIPNIDRSSLRNDVPFGEVVPEQRRAPGVEYGFPDADPKFGARQEEAQKWILKLWESRQK*
Ga0055471_100778021	3300003987	Natural And Restored Wetlands	TLTHTMIPAIDRSSLRTDVPVGQVSPDQQRDPGKEYAFPDADPNMGAKQEEAQKWIKKLWESKEK*
Ga0055488_102192691	3300004070	Natural And Restored Wetlands	QTLTHTKIPEIDRSSLRTDIPLGEVSADQRREPGKEYGFPDADPKMGDRQEEAQTWIRKLWESRQK*
Ga0063454_1011575351	3300004081	Soil	TLIPNIDRSSLRNDVPFGEVLPDQRRKPGVEYAFPDGDPKYGARQEEAQKWIRTIWDSRQK*
Ga0063356_1044555691	3300004463	Arabidopsis Thaliana Rhizosphere	GQTLTHTMVPAIDRHSLRTDVPIGEVVADQRREPGKEYAFPDADPGMGAKQEEIQKWVLKLWESRQK*
Ga0065712_100090942	3300005290	Miscanthus Rhizosphere	NDIPFGEVTPDQRRKPGVEYAFPDADPKFAARQEEAQKWIYNIWETRQK*
Ga0065715_100511731	3300005293	Miscanthus Rhizosphere	RNDIPFGEVTPDQRRKPGVEYAFPDADPKFAARQEEAQKWIYNIWETRQK*
Ga0065707_102087141	3300005295	Switchgrass Rhizosphere	DVPFGEVLPQQRRGFGKEYAFPDADPAMGEKQEEVQKWAFKLWESRQK*
Ga0066388_1032011812	3300005332	Tropical Forest Soil	DRSSLRNDIPLGEVVPEQRRVPGVEYGFPDADPKFGARQEEAQKWILKLWESRQK*
Ga0066388_1083185311	3300005332	Tropical Forest Soil	EGQTLTHTMIPNIDRSSLRNDIPLGEVVPEQRRVPGVEYGFPDADPKFGARQEEAQKWILKLWESRQK*
Ga0070675_1015791862	3300005354	Miscanthus Rhizosphere	RNDIPFGEVTPDQRRKAGVEYAFPDADPKFAARQEEAQKWIYKIWETRQK*
Ga0070674_1010246722	3300005356	Miscanthus Rhizosphere	FVNWFLAKEGQTLTHTMIPNIDRSSLRTDVPVGQVVPDQQRQPGKQYTFPDAEPGIGAKHEEAQKWIFKIWESRQK*
Ga0070659_1001332722	3300005366	Corn Rhizosphere	PNIDRSSLRNDIPFGEVTPDQRRKPGVEYAFPDADPKFAARQEEAQKWIYNIWETRQK*
Ga0070711_1010519662	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	DRSSLRNDIPFGEVTLDQRRKPGVEYAFPDADPKFGPRQEEAQKWIYKIWESKQK*
Ga0070705_1006620161	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	TLIPNLDRASLRNDVPFGEVLPQQRRGFGKEYAFPDADPSAGAKQEEIQKWLFKLWESKQK*
Ga0066686_101862632	3300005446	Soil	GQTLTHTLIPNIDRSSLRNDIPFGEVAPDQRRKPGVEYAFPDADPQFGPRQEEAQKWIYKIWESRQK*
Ga0070662_1003580021	3300005457	Corn Rhizosphere	SKEGQTLTHTLVPNIDRSSLRNDIPFGEVTPDQRRKAGVEYAFPDADPKFAARQEEAQKWIYKIWETKQK*
Ga0068867_1014026902	3300005459	Miscanthus Rhizosphere	GQTLTHTLVPNIDRSSLRNDIPFGEVTPDQRRKAGVEYAFPDADPKFAARQEEAQKWIYKIWETKQK*
Ga0070697_1003083562	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	DRSSLRIDVPFGEVVPEQRRAPGVEYGFPDADPKFGARQEEAQKWIVKLWESRQK*
Ga0068854_1004257011	3300005578	Corn Rhizosphere	SKEGQTLTHTLVPNIDRSSLRNDIPFGEVTPDQRRKPGVEYAFPDADPKFAARQEEAQKWIYNIWETRQK*
Ga0068856_1021105961	3300005614	Corn Rhizosphere	PNIDRSSLRNDIPFGEVTPDQRRKAGVEYAFPDADPKFAARQEEAQKWIYKIWETKQK*
Ga0066905_1014691351	3300005713	Tropical Forest Soil	GQTLTHTMIPNIDRSSLRNDIPLGEVVPEQRRVPGVEYGFPDADPKFGARQEEAQKWILKLWESRQK*
Ga0074470_104524174	3300005836	Sediment (Intertidal)	LFINWFLTEEGQTATHTLIPNLDRASLRNDVPFGEVLPQQRRGFGKEYAFPDADPAMGEKQEEVQKWAFKIWESRQK*
Ga0068858_1019076511	3300005842	Switchgrass Rhizosphere	LDRASLRNDVPFGEVLPQQRRGFGKEYAFPDADPSAGAKQEEIQKWLFKLWESKQK*
Ga0081455_103537962	3300005937	Tabebuia Heterophylla Rhizosphere	SLRNDIPFGEVVPEQRRVPGVEYGFPDADPKFGARQEEAQKWILKLWESRQK*
Ga0066651_101425891	3300006031	Soil	LIPNIDRSSLRNDIPFGEVVPDQRRGPSVEYGFPDADPKFGARQEEAQKWILKIWESRQK
Ga0068871_1020382771	3300006358	Miscanthus Rhizosphere	TLTHTLIPNLDRSSLRTDVPFGEVLPQQRRGFGKEYAFPDADPAMGAKQEEVQKWVFKLWESKQK*
Ga0066659_118957592	3300006797	Soil	SKEGQTLTHTLIPNIDRSSLRNDIPFGEVVPDQRRGPSVEYGFPDADPKFGARQEEAQKWILKIWESRQK*
Ga0079221_103743282	3300006804	Agricultural Soil	DRSSLRNDIPFGEVTPDQRRKPGVEYAFPDADPKFAARQEEAQKWIYNIWETRQK*
Ga0075421_1008751501	3300006845	Populus Rhizosphere	TLTHTMIPNIDRSSLRNDVPLGEVVPEQRRAPGVEYGFPDADPKFGARQEEAQKWILKMWESRQK*
Ga0075421_1015960631	3300006845	Populus Rhizosphere	EGQTATHNLIPNLDRASLRNDVPFGEVLPAQRRGFGKEYAFPDADPAMGQKQEEVQKWAFKIWESRQK*
Ga0075431_1003515811	3300006847	Populus Rhizosphere	RASLRNDVPFGEVLPAQRRGFGKEYAFPDADPAMGEKQEEVQKWAFKIWESRQK*
Ga0073934_101303342	3300006865	Hot Spring Sediment	NLDRSSLRNDIPAGEVVPEQRRAPGVEYAFPDADPKTGARQEEAQKWIYKIWESRQK*
Ga0079219_110749391	3300006954	Agricultural Soil	LTKEAQTLTHTLVPNLDRSSLRNDVPVGEVPPDQRRVPGVEYGFPDADPKFGAKQEEAQKWVLKLWESRQK*
Ga0105241_115874422	3300009174	Corn Rhizosphere	LTHTLVPNIDRSSLRNDIPFGEVTPDQRRKAGVEYAFPDADPKFAARQEEAQKWIYKIWETRQK*
Ga0105249_108844323	3300009553	Switchgrass Rhizosphere	IDRSSLRNDIPFGEVTPDQRRKPGVEYAFPDADPKFAARQEEAQKWIYNIWETRQK*
Ga0105347_12601922	3300009609	Soil	INWFLTKEGQTLTHTLIPNLDRASLRTDVPFGEVSPQQRRGYGKEYAFPDADPAMGEKQEEVQKWVFKLWESRQK*
Ga0105074_10101201	3300010029	Groundwater Sand	EGQTLTHTVIPNIDRSSLRNDVPFGEVVPEQRRAPGVEYGFPDADPKFGARQEEAQKWILKLWESRQK*
Ga0126380_101440412	3300010043	Tropical Forest Soil	SKEGQTLTHTMIPNIDRSSLRNDIPLGEVVPEQRRVPGVEYGFPDADPKFGARQEEAQKWILKLWESRQK*
Ga0126380_103324611	3300010043	Tropical Forest Soil	RSSLRNDIPVGVVVQEQRRAPGVEYAFPDADPKFGARQEEAQKWILKVWESRQK*
Ga0126382_101073841	3300010047	Tropical Forest Soil	THTMIPNIDRSSLRNDIPLGEVVPEQRRVPGVEYGFPDADPKFGARQEEAQKWILKLWESRQK*
Ga0126382_120653021	3300010047	Tropical Forest Soil	KEGQTLTHTMIPNIDRSSLRNDIPLGEVVSEQRRVPGVEYGFPDADPKFAARQEEAQKWILKLWESRQK*
Ga0134065_102597221	3300010326	Grasslands Soil	LRNDIPFGEVVPDQRRGPSVEYGFPDADPKFGARQEEAQKWILKIWESRQK*
Ga0134071_102774062	3300010336	Grasslands Soil	WFLSREGQTLTHTMIPNLDRSSLRNDIPVGEVVPEQQRAAGVEYAFPDADPKFGARQEEAQKWVYKIWESRQK*
Ga0126372_108484292	3300010360	Tropical Forest Soil	FANWFLTKEAQTLTHTLVPNLDRSSLRNDVPVGEVPPDQRRVAGVEYGFPDADPKFGPKQEEAQKWILKLWESRQK*
Ga0126377_129814291	3300010362	Tropical Forest Soil	LTHTMIPNIDRSSLRNDIPLGEVVPEQRRVPGVEYGFPDADPKFGARQEEAQKWILKLWESRQK*
Ga0126383_100874863	3300010398	Tropical Forest Soil	SSLRNDIPLGEVVPEQRRVPGVEYGFPDADPKFGARQEEAQKWILKLWESRQK*
Ga0134127_132359312	3300010399	Terrestrial Soil	TKEGQTLTHTLIPNLDRASLRNDVPFGEVLPQQRRGFGKEYAFPDADPSAGAKQEEIQKWLFKLWESKQK*
Ga0134121_120340552	3300010401	Terrestrial Soil	PNLDRASLRNDVPFGEVLPQQRRGFGKEYAFPDADPSAGAKQEEIQKWLFKLWESKQK*
Ga0134121_120810542	3300010401	Terrestrial Soil	FLSKEGQTLTHTLIPNLDRSSLRTDVPFGEVLPQQRRGFGKEYAFPDADPAMGAKQEEVQKWVFKLWESKQK*
Ga0134123_110799182	3300010403	Terrestrial Soil	PNIDRSSLRNDIPFGEVTPDQRRKPGVEYAFPDADPKFGPRQEEAQKWIYKIWESKQK*
Ga0137425_10390301	3300011422	Soil	LFINWFLTKEGQTLTHTLIPNLDRSSLRTDVPFGEVSPQQRRGYGKEYAFPDADPAMGEKQEEVQKWVFKLWESRQK*
Ga0137457_12492562	3300011443	Soil	FLTKEGQTATHNLIPNLDRSSLRNDVPFGEVLPAQRRGFGKEYAFPDADPAMGEKQEEVQKWAFKIWESRQK*
Ga0137336_10962571	3300012161	Soil	SSLRNDIPAGQVVPEQRRAPGVEYAFPDADPKTGARQEEAQKWIYKIWESRQK*
Ga0137383_105276342	3300012199	Vadose Zone Soil	DRSSLRNDIPFGEVVPDQRRGPSVEYGFPDADPKFGARQEEAQKWILKIWESRQK*
Ga0137382_105772751	3300012200	Vadose Zone Soil	LTHTLVPNIDRSSLRNDIPFGEVTPDQRRKSGVEYAFPDADPRFGPRQEEAQKWIYKIWESKQK*
Ga0137374_108303071	3300012204	Vadose Zone Soil	SREGQTLTHTMIPNLDRSSLRNDIPVGEVVPEQRRAAGVEYAFPDADPKFGARQEEAQKWVYKIWESRQK*
Ga0137374_108303141	3300012204	Vadose Zone Soil	SREGQTLTHTMIPNLDRSSLRNDIPVGEVVPEQRRAAGVEYAFPDADPKFGTRQEEAQKWVYKIWESRQK*
Ga0137369_101853702	3300012355	Vadose Zone Soil	SREGQTLTHTMIPNLDRSSLRNDIPAGEVVPEQRRAAGVEYAFPDADPKFGARQEEAQKWVYKIWESRQK*
Ga0157295_101700962	3300012906	Soil	WFLSKEGQTLTHTLVPNIDRSSLRNDIPFGEVTPDQRRKAGVEYAFPDADPKFAARQEEAQKWIYKIWETRQK*
Ga0137394_103746392	3300012922	Vadose Zone Soil	SKEGQTLTHTLVPNIDRSSLRNDIPFGEVTPDQRRKPGVEYAFPDADPKFGPRQEEAQKWIYKIWESKQK*
Ga0137416_121761281	3300012927	Vadose Zone Soil	LTHTLVPNIDRSSLRNDIPFGEVTPDQRRKPGVEYAFPDADPKFGPRQEEAQKWIYKIWESRQK*
Ga0137404_118801491	3300012929	Vadose Zone Soil	TLTHTMVPNIDRLSLRNDVPFGEVVPEQRRAPGVEYGFPDADPKFGARQEEAQKWILKLWESRQK*
Ga0153915_123168501	3300012931	Freshwater Wetlands	LRNDVPIGEVVPDQRRKPGVVYSFPDADPKYGARQEEAQKWILKLWESRQK*
Ga0126375_111226892	3300012948	Tropical Forest Soil	SLRNDIPYGEVLPEERRAPGVKYLFPDADPSFGARQEEAQKWILKIWESRQR*
Ga0126375_111374392	3300012948	Tropical Forest Soil	LRNDIPLGEVVPEQRRVPGVEYGFPDADPKFGARQEEAQKWILKLWESRQK*
Ga0126375_116830771	3300012948	Tropical Forest Soil	NWFLSKEGQTLTHTLIPNIDRSSLRTDVPIGEVVANQRRVPGKEYAFPDADPMMGVKQEEAQRWVLKIWETRQK*
Ga0126375_118715191	3300012948	Tropical Forest Soil	EGQTLTHTMIPNIDRSSLRNDIPLGEVVPEQRRVLGVEYGFPDADPKFGARQEEAQKWILKLWESRQK*
Ga0157374_101359791	3300013296	Miscanthus Rhizosphere	RSSLRNDIPFGEVTPDQRRKPGVEYAFPDADPKFAARQEEAQKWIYNIWETRQK*
Ga0157374_101525503	3300013296	Miscanthus Rhizosphere	SSLRNDIPFGEVTPDQRRKPGVEYAFPDADPKFAARQEEAQKWIYNIWETRQK*
Ga0157378_102017722	3300013297	Miscanthus Rhizosphere	RSSLRTDVPFGEVLPQQRRGFGKEYAFPDADPAMGAKQEEVQKWVFKLWESKQK*
Ga0075309_11513992	3300014268	Natural And Restored Wetlands	KEGQTLTHTMVPNLDRSSLRNDITIGEVVPEQRRAQGVEYAFPDADPRFGARQEEAQKWIYKIWESRQK*
Ga0180104_10053522	3300014884	Soil	LTHTLIPNLDRSSLRNDIPAGQVVPEQRRAPGVEYAFPDADPKTGARQEEAQKWIYKIWESRQK*
Ga0180073_11344412	3300015256	Soil	MPNSGRSSLRNDIPFGEVVPDQRRTPGKQYAFPDAEPGMGAKQEEAQKSIYKIWESRQK*
Ga0180093_10039902	3300015258	Soil	LTHTLVPNIDRSSLRNDIPIGEVVVDQRRKPGVEYGFPDADPAMGAKQEEAQKWVLKIWESRQK*
Ga0132258_127202142	3300015371	Arabidopsis Rhizosphere	FANWFLTKEAQSLTHTLVPNLDRSSLRNDVPIGEVPPDQRRAPGVEYGFPDADPKFGARQEEAQKWIYKLWESRQK*
Ga0132256_1012223981	3300015372	Arabidopsis Rhizosphere	KEGQTLTHTLVPNIDRSSLRNDIPFGEVTPDQRRKPGIEYAFPDADPKFGPRQEEAQKWIYKIWESKQK*
Ga0132256_1028773122	3300015372	Arabidopsis Rhizosphere	SSLRNDIPFGEVTPDQRRKAGVEYAFPDADPKFAARQEEAQKGIYTIWETRQK*
Ga0187776_104613922	3300017966	Tropical Peatland	DRASLRNDVPFGEVLPQQRRGFGKDYAFPDADPAMGTKQEEVQKWAFKIWESRQK
Ga0184637_100442214	3300018063	Groundwater Sediment	DIPFGEVVAQHRRVPGKEYAFPDADPGYGARSEEAQKWILKLWESRQR
Ga0184632_102612351	3300018075	Groundwater Sediment	THTMIPNIDRSSLRNDVPFGEVVPEQRRAPGVEYGFPDADPKFGARQEEAQKWILKLWESRQK
Ga0184609_103082671	3300018076	Groundwater Sediment	INWFLSKEGQTLTHTMIPNIDRSSLRTDVPIGEVVVDQRRAPGRQYSFPDAEPGMGAKQEEAQKWIFKLWESRQK
Ga0184633_103083332	3300018077	Groundwater Sediment	STLRNDVPHGEAQPEQKRAPGKEYFFPDSDPTFPAKQEEAQKWVLKIWESRQK
Ga0184625_102157641	3300018081	Groundwater Sediment	DRSSLRNDVPFGEVVPEQRRAPGVEYGFPDADPKFGARQEEAQKWILKLWESRQK
Ga0190272_105150532	3300018429	Soil	HTLIPNLDRSSLRTDVPFGEVSPQQRRGYGKEYAFPDADPAMGEKQEEVQKWVFKLWESRQK
Ga0190272_109487642	3300018429	Soil	MIPALDRSSLRTDVPFGEVSPDQRREPGKEYAFPDADPSMGAKQEEAQKWIHKIWESKQK
Ga0190269_112891472	3300018465	Soil	FLSKEGQTLTHTMIPNIDRSSLRTDVPVGHVVADQQRKPGKQYTFPDAEPGMGAKHEEAQKWILKIWESRQK
Ga0180119_12013982	3300019228	Groundwater Sediment	RSSLRNDIPIGEVVVDQRRKPGVEYGFPDADPAMGAKQEEAQKWVLKIWESRQK
Ga0173479_100616932	3300019362	Soil	RSSLRNDIPFGEVTPDQRRKAGVEYAFPDADPKFAARQEEAQKWIYNIWETRQK
Ga0193743_10616181	3300019889	Soil	AAKLFTNWFLTKEGQTLTHTLIPNLDRASLRNDVPFGEVLPQQRRGFGKEYAFPDADPSAGAKQEEIQKWLFKLWESKQK
Ga0163153_102536101	3300020186	Freshwater Microbial Mat	FLSKEGQTLTHTMIPAIDRSSLRNDIPIGEVVVDQRRVPGKEYGFPDADPAMGAKQEEAQKWVYKIWETRQK
Ga0210378_103711652	3300021073	Groundwater Sediment	FLSKEGQTLTHTLVPNIDRSSLRNDIPFGEVVPDQRRKPGVEYAFPDADPKFGPRQEEAQKWIYKIWESRQK
Ga0209172_103709331	3300025310	Hot Spring Sediment	NLDRSSLRNDIPAGEVVPEQRRAPGVEYAFPDADPKTGARQEEAQKWIYKIWESRQK
Ga0210098_10526651	3300025550	Natural And Restored Wetlands	TKIPEIDRSSLRTDIPLGEVSADQRREPGKEYGFPDADPKMGDRQEEAQTWIRKIWESRQ
Ga0210115_10707551	3300025791	Natural And Restored Wetlands	TLTHTMIPAIDRSSLRTDVPVGQVSPDQQRDPGKEYAFPDADPNMGAKQEEAQKWIKKLWESKEK
Ga0207660_102283362	3300025917	Corn Rhizosphere	LTKEGQTATHNLIPNLDRASLRNDVPFGEVLPQQRRGFGKEYAFPDADPAMGQKQEEIQKWAFKIWESRQK
Ga0207706_115812201	3300025933	Corn Rhizosphere	LVPNIDRSSLRNDIPFGEVTPDQRRKPGVEYAFPDADPKFAPRQEEAQKWIYKIWETRQK
Ga0207661_119194502	3300025944	Corn Rhizosphere	QTLTHTLVPNIDRSSLRNDIPFGEVTPDQRRKAGVEYAFPDADPKFAARQEEAQKWIYKIWETRQK
Ga0210116_11130721	3300025959	Natural And Restored Wetlands	RTDIPLGEVSADQRREPGKEYGFPDADPKMGDRQEEAQTWIRKLWESRQK
Ga0207708_103635271	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	TLVPNIDRSSLRNDIPFGEVTPDQRRKPGIEYAFPDADPKFGPRQEEAQKWIYKIWESKQ
Ga0207708_115887072	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	DRSSLRTDVPVGQVVPDQQRQPGKQYTFPDAEPGIGAKHEEAQKWIFKIWESRQK
Ga0207702_119572672	3300026078	Corn Rhizosphere	LSKEGQTLTHTLVPNIDRSSLRNDIPFGEVTPDQRRKAGVEYAFPDADPKFAARQEEAQKWIYKIWETKQK
Ga0207648_109267872	3300026089	Miscanthus Rhizosphere	VPNIDRSSLRNDIPFGEVTPDQRRKPGVEYAFPDADPKFGPRQEEAQKWIYKLWESKQK
Ga0209056_106451532	3300026538	Soil	RNDVPFGEVVPEQRRSPNVEYGFPDADPKFGARQEEAQKWILKLWESRQR
Ga0256866_12135452	3300027650	Soil	KEGQTLTHTMIPNIDRSSLRTDVPVGEVVSDQQRKPGKQYSFPDAEPGMGAKHEEAQKWIFKIWESRQK
Ga0209797_104514011	3300027831	Wetland Sediment	REGQTATHTLIPNLDRSSLRNDIPFGEVTPQQRRGFGKEYNFPDAEPTSGDKTEEVQKWVFKLWESRQK
Ga0209382_102941251	3300027909	Populus Rhizosphere	RNDVPFGEVLPAQRRGFGKEYAFPDADPAMGEKQEEVQKWAFKIWESRQK
Ga0209583_107857022	3300027910	Watersheds	LRNDVPLGEAQPEQKRAPGKEYFFPDSDPTFPAKQEEAQKWVYKLWESRQK
Ga0299907_102560142	3300030006	Soil	NIDRSSLRTDVPVGEVVSDQQRKPGKQYSFPDAEPGMGAKHEEAQKWIFKIWESRQK
Ga0307498_100381691	3300031170	Soil	TLVPNIDRSSLRNDIPFGEVTPDQRRKPGVEYAFPDADPKFGPRQEEAQKWIYKIWESKQ
Ga0310887_105646012	3300031547	Soil	RNDVPFGEVLPQQRRGFGKEYAFPDADPAMGEKQEEVQKWAFKLWESRQK
Ga0307405_100104811	3300031731	Rhizosphere	THTLIPNLDRATLRNDVPFGEVLPAQRRGFGKEYAFPDADPAMGEKQEEVQKWAFKLWESRQK
Ga0307413_111554211	3300031824	Rhizosphere	FLSKEGQTLTHTLIPNLDRATLRNDVPFGEVLPAQRRGFGKEYAFPDADPAMGEKQEEVQKWAFKLWESRQK
Ga0310904_104558782	3300031854	Soil	IDRSSLRNDIPFGEVTPDQRRKAGVEYAFPDADPKFAARQEEAQKWIYKIWETRQK
Ga0310904_106572891	3300031854	Soil	IPNIDRSSLRTDVPVGEVVPDQQRQAGKQYAFPDAEPGMGAKQEEAQKWILKLWESRQK
Ga0307406_102794292	3300031901	Rhizosphere	WFLSKEGQTLTHTMIPNIDRSSLRTDVPVGQVVADQQRQPGKQYTFPDAEPGIGAKHEEAQKWIFKIWESRQK
Ga0310900_110925462	3300031908	Soil	PNLDRATLRNDVPFGEVLPQQRRGFGKEYAFPDADPAMGEKQEEVQKWAFKLWESRQK
Ga0306924_123762031	3300032076	Soil	RNDIPFGEVTPDQRRKPGVEYGFPDADPKFAARQEEAQKWIYKVWETRQK
Ga0307415_1002215951	3300032126	Rhizosphere	TLRNDVPFGEVLPAQRRGFGKEYAFPDADPAMGEKQEEIQKWAFKLWESRQK
Ga0307470_113325201	3300032174	Hardwood Forest Soil	DRSSLRLDVPFGEVVPEQRRAPGVEYGFPDADPKFGARQEEAQKWIVKLWESRQK
Ga0310889_101944691	3300032179	Soil	TMIPNIDRSSLRTDVPVGQVVPDQQRQPGKQYTFPDAEPGIGAKHEEAQKWIFKIWESRQ
Ga0307472_1007132702	3300032205	Hardwood Forest Soil	IPNIDRSSLRIDVPFGEVVPEQRRAPGVEYGFPDADPKFGARQEEAQKWIVKLWESRQK
Ga0307472_1011340851	3300032205	Hardwood Forest Soil	SLRIDVPFGEVVPEQRRAPGVEYGFPDADPKFGARQEEAQKWILKLWESRQK
Ga0335080_106938521	3300032828	Soil	PNLDRSSLRNDIPIGEVMADQRRVSGVEYAFPDADPKFGARQEEAQKWILKVWESRQK
Ga0316605_106834242	3300033408	Soil	LRTDVPIGEVVVDQRRVPGKEYGFPDADPAMGAKQEEAQKWVYKIWETRQK
Ga0316626_107545302	3300033485	Soil	LSKEGQTLTHTLIPNLDRASLRNDVPFGEVLPQQRRGFGKEYAFPDADPAMGEKQEEVQKWAFKLWESRQK
Ga0364942_0179377_3_173	3300034165	Sediment	IDRSSLRNDIPVGEVVPEQRRAAGVEYAFPDADPKFGARQEEAQKWVYKIWETRQK
Ga0364934_0288415_444_620	3300034178	Sediment	PNIDRSSLRNDIPFGEVVPDQRRAPGKQYGFPDAEPGMGAKQEEAQKWVYKLWETRQK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F063731

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences