Metagenome Family F063688

Basic Information
Family ID	F063688
Family Type	Metagenome
Number of Sequences	129
Average Sequence Length	64 residues
Representative Sequence	MSRYNSNYGSHDQLQDLRKLNMELHHELDAIKRLLDETTKELHQAQDELTLAIEALVRARDIKP
Number of Associated Samples	92
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Viruses
% of genes with valid RBS motifs	66.67 %
% of genes near scaffold ends (potentially truncated)	18.60 %
% of genes from short scaffolds (< 2000 bps)	72.09 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	No

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Duplodnaviria (67.442 % of family members)
NCBI Taxonomy ID	2731341
Taxonomy	All Organisms → Viruses → Duplodnaviria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake (26.357 % of family members)
Environment Ontology (ENVO)	Unclassified (67.442 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (65.116 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90 1JGI12421J11937_101134712 2B570J29032_1095137572 3JGI25909J50240_10927752 4JGI25907J50239_11136732 5JGI25920J50251_101076272 6Ga0049083_101090972 7Ga0049083_101405982 8Ga0049081_100051853 9Ga0049081_100813872 10Ga0049080_100054679 11Ga0049080_101265922 12Ga0049085_101660562 13Ga0049082_100501652 14Ga0075465_1000087610 15Ga0070744_101373861 16Ga0070744_101550391 17Ga0075467_104705962 18Ga0075464_1000071620 19Ga0070748_12401702 20Ga0102828_10200612 21Ga0102828_11268031 22Ga0104986_14162 23Ga0105747_12680122 24Ga0108970_109388491 25Ga0102829_10280494 26Ga0102860_10971152 27Ga0114973_101433202 28Ga0114973_104410011 29Ga0114980_100354762 30Ga0114980_100460132 31Ga0114968_1000985913 32Ga0114968_101007173 33Ga0114968_105876411 34Ga0114977_100015919 35Ga0114978_102487201 36Ga0114978_103253662 37Ga0114981_101191612 38Ga0114981_104798612 39Ga0114981_106887192 40Ga0114966_100766093 41Ga0114966_107600041 42Ga0114970_102627911 43Ga0114975_104385972 44Ga0114969_106872071 45Ga0114974_1000209721 46Ga0133913_102751261 47Ga0133913_109629551 48Ga0151515_1061221 49Ga0153698_172720 50Ga0153702_160618 51Ga0153699_152121 52Ga0119960_10078662 53Ga0181338_10500722 54Ga0181350_10610652 55Ga0181356_11312361 56Ga0181349_10112186 57Ga0181346_11967012 58Ga0181346_12224351 59Ga0181348_11080092 60Ga0181348_11399242 61Ga0181348_11950942 62Ga0181355_12829671 63Ga0181359_10035522 64Ga0181359_10172924 65Ga0181359_10565322 66Ga0181359_10969122 67Ga0181359_11706001 68Ga0181359_11828262 69Ga0181359_12144201 70Ga0208234_10311222 71Ga0222712_102603691 72Ga0181354_12032531 73Ga0244775_1002138613 74Ga0244775_100634292 75Ga0244775_104217201 76Ga0244775_108993661 77Ga0244775_113141711 78Ga0208426_10007421 79Ga0208800_10008541 80Ga0208923_10329221 81Ga0208966_11415342 82Ga0208974_10053959 83Ga0208942_11850142 84Ga0208133_11223021 85Ga0208975_10049643 86Ga0208975_10717692 87Ga0209443_11969392 88Ga0209443_13292551 89Ga0209297_10011949 90Ga0209087_11364231 91Ga0209190_11212812 92Ga0209190_11688851 93Ga0209597_12525381 94Ga0209596_100194119 95Ga0209596_10024341 96Ga0209296_10668544 97Ga0209598_101420351 98Ga0209246_100696001 99Ga0209246_101349922 100Ga0209246_103205042 101Ga0209107_1000199111 102Ga0209354_103977401 103Ga0209191_13714731 104Ga0209298_100261315 105Ga0209299_12562842 106Ga0304730_10387905 107Ga0315291_106708142 108Ga0315291_112485141 109Ga0315293_108553821 110Ga0315288_111689091 111Ga0315288_117383821 112Ga0315285_105290711 113Ga0315294_108464792 114Ga0315274_102252181 115Ga0315274_110479561 116Ga0315272_106768141 117Ga0315284_104780531 118Ga0334982_0109820_829_1011 119Ga0334994_0136643_772_966 120Ga0335003_0329448_507_674 121Ga0335024_0382944_368_562 122Ga0334987_0230781_565_750 123Ga0335001_0007894_1_186 124Ga0335020_0056938_1115_1309 125Ga0335012_0567443_173_367 126Ga0335035_0072085_1680_1874 127Ga0335035_0333829_3_173 128Ga0335033_0264795_2_190 129Ga0335060_0410656_1_174
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90 1JGI12421J11937_101134712 2Ga0075465_1000087610 3Ga0102828_10200612 4Ga0133913_102751261 5Ga0181348_11080092 6Ga0335035_0072085_1680_1874
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90 1JGI12421J11937_101134712 2Ga0075465_1000087610 3Ga0102828_10200612 4Ga0133913_102751261 5Ga0181348_11080092 6Ga0335035_0072085_1680_1874
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 79.69% β-sheet: 0.00% Coil/Unstructured: 20.31%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF02557	VanY	11.63
PF00145	DNA_methylase	6.98
PF05065	Phage_capsid	3.10
PF14279	HNH_5	3.10
PF04586	Peptidase_S78	1.55
PF03354	TerL_ATPase	0.78
PF02467	Whib	0.78
PF04860	Phage_portal	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG1876	LD-carboxypeptidase LdcB, LAS superfamily	Cell wall/membrane/envelope biogenesis [M]	11.63
COG2173	D-alanyl-D-alanine dipeptidase	Cell wall/membrane/envelope biogenesis [M]	11.63
COG0270	DNA-cytosine methylase	Replication, recombination and repair [L]	6.98
COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	Mobilome: prophages, transposons [X]	3.10
COG3740	Phage head maturation protease	Mobilome: prophages, transposons [X]	1.55
COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	Mobilome: prophages, transposons [X]	0.78

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.22 %
Unclassified	root	N/A	0.78 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	0.78 %
Unclassified	root	N/A	0.78 %
Viruses	superkingdom	All Organisms → Viruses	98.45 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.78 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	67.44 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	31.01 %
Unclassified	root	N/A	0.78 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.78 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	67.44 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	31.01 %
Unclassified	root	N/A	0.78 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	31.01 %
Unclassified	root	N/A	0.78 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	67.44 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.78 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	67.44 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	31.01 %
Unclassified	root	N/A	0.78 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.78 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	67.44 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	31.01 %
Unclassified	root	N/A	0.78 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	31.01 %
Unclassified	root	N/A	0.78 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	67.44 %

Scaffold	Taxonomy	Length	IMG/M Link
3300000756\|JGI12421J11937_10113471	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	718	Open in IMG/M
3300002408\|B570J29032_109513757	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	826	Open in IMG/M
3300003393\|JGI25909J50240_1092775	Not Available	601	Open in IMG/M
3300003394\|JGI25907J50239_1113673	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	526	Open in IMG/M
3300003404\|JGI25920J50251_10107627	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	635	Open in IMG/M
3300005580\|Ga0049083_10109097	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	957	Open in IMG/M
3300005580\|Ga0049083_10140598	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	830	Open in IMG/M
3300005581\|Ga0049081_10005185	All Organisms → Viruses → Predicted Viral	4918	Open in IMG/M
3300005581\|Ga0049081_10081387	All Organisms → Viruses → Predicted Viral	1215	Open in IMG/M
3300005582\|Ga0049080_10005467	All Organisms → Viruses → Predicted Viral	4401	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.22%
Host-Associated	Host-Associated	0.78%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	99.22%
Plants	Host-Associated → Plants	0.78%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	82.95%
Leaf	Host-Associated → Plants → Leaf	0.78%
Marine	Environmental → Aquatic → Marine	16.28%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	4.65%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	4.65%
Lake	Environmental → Aquatic → Freshwater → Lake	45.74%
Lentic	Environmental → Aquatic → Freshwater → Lentic	34.11%
Lotic	Environmental → Aquatic → Freshwater → Lotic	2.33%
Unclassified	Environmental → Aquatic → Marine → Unclassified	6.98%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Leaf → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	0.78%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	4.65%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	1.55%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	8.53%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	37.21%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	31.78%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	6.98%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	4.65%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	2.33%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Leaf → Unclassified → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Aquatic	0.78%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	3.88%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	6.20%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	4.65%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.78%
Estuary	Host-Associated → Plants → Leaf → Unclassified → Unclassified → Estuary	0.78%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	0.78%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	9.30%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	2.33%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.55%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	0.78%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	0.78%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	1.55%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	26.36%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	20.93%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	10.08%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	8.53%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000756	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011	Environmental	Open in IMG/M
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental	Open in IMG/M
3300003393	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD	Environmental	Open in IMG/M
3300003394	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN	Environmental	Open in IMG/M
3300003404	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DCMD	Environmental	Open in IMG/M
3300005580	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG MI27MSRF	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300005582	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF	Environmental	Open in IMG/M
3300005583	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG SU08MSRF	Environmental	Open in IMG/M
3300005584	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRF	Environmental	Open in IMG/M

Showing 1 to 10 of 92 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12421J11937_101134712	3300000756	Freshwater And Sediment	MTRYNSNYGSHDQLQDLRKLNMELHHELDAIKRLLDETTKGLQQSQDELYLALEALRRALP*
B570J29032_1095137572	3300002408	Freshwater	MSRYNGNYGSHDQLQDLRKLNMELHHELDAIKRLLDETTKELHQAQDELTLAIEALVRARDIKP*
JGI25909J50240_10927752	3300003393	Freshwater Lake	MTRYNGNYGSHDQLQDLRKMNMALHHELDAIKRLLDEVTKELHQAQDELTLAIEALVRARGDKP*
JGI25907J50239_11136732	3300003394	Freshwater Lake	MTRYNGNYGSHDQLQDLRKMNMALHHELDAIKRLLDEVTKELHQAQDELTLAIEA
JGI25920J50251_101076272	3300003404	Freshwater Lake	MTRYNSNYGSHDQLQDLRKLXMELHHELDAIKRLLDETTKELHQAQDELTLAIEALVRAREIKP*
Ga0049083_101090972	3300005580	Freshwater Lentic	MTRYNSNYGSHDQLQDLRKLNMGLHHELDAIKRLLDETTKELHQAQDELLLAIEALVRARDIKP*
Ga0049083_101405982	3300005580	Freshwater Lentic	MTRYNSNYGSHDQLQDLRKLNMELHHELDAIKRLLDETTKELHQAQDELTLAIEALVRAREIKP*
Ga0049081_100051853	3300005581	Freshwater Lentic	MTRYNSNYGSHEQLQDLRKLNMGLHHELDAIKRLLDETTKELHQAQDELTLAIEALVRARDVKP*
Ga0049081_100813872	3300005581	Freshwater Lentic	MSRYNSNYGSHDQLQDLRKLNMGLHHELDAIKRLLDETTKELHQAQDELLLAIEALVRARDIKP*
Ga0049080_100054679	3300005582	Freshwater Lentic	MSRYNSNYGSHDQLQDLRKLNMELHHELDAIKRLLDETTKSLQQSQDELYLALEALRRQMP*
Ga0049080_101265922	3300005582	Freshwater Lentic	MSRYNSNYGSHDQLQDLRKLNMGLHHELDAIKRLLDETTKELHQAQDELTLAIEALVRARDVKP*
Ga0049085_101660562	3300005583	Freshwater Lentic	MTRYNGNYGSHDQLQDLRKMNMSLHHELDAIKRLLDEVTKELHQAQDELTLAIEALVRARDGKP*
Ga0049082_100501652	3300005584	Freshwater Lentic	MNRYNGNYGSHDQLQDLRKMNMALHHELDAIKRLLDEVTKELHQAQDELTLAIEALVRARDGKP*
Ga0075465_1000087610	3300006037	Aqueous	MESMSRYNSNYGSHDQLQDLRKLNMDLYHQLDEVKRLLDETTRALETSQDELYLALEALRRETPDWTHE*
Ga0070744_101373861	3300006484	Estuarine	MKRYNNNYGSHDQLQDLRKLNMELHHELDAIKRLLDETTKELHQAQDELLLAIEALVRARDGKP*
Ga0070744_101550391	3300006484	Estuarine	MSRYNSNYGSHDQLQDLRKLNMELHHELDAIKRLLDETTKALHQSQDELLLAIEALVRARDIKP*
Ga0075467_104705962	3300006803	Aqueous	MSRYNSNYGSHDQLQDLRKLNMELHHELDAIKRLLDETTKELHQAQDELTLAIEALVRARDI
Ga0075464_1000071620	3300006805	Aqueous	MSRYNSNYGSHDQLQDLRKLNMDLYHQLDEVKRLLDETTRALETSQDELYLALEALRRETPDWTHE*
Ga0070748_12401702	3300006920	Aqueous	MSRYNSNYGSHDQLQDLRKLNMELHHELDAIKRLLDETTKELHQAQDELTLAIEALVRVRDIKP*
Ga0102828_10200612	3300007559	Estuarine	GFKSYRGMETMSRYNSNYGSHDQLQDLRKLNMELHHELDAIKRLLDETTKALHQSQDELLLAIEALVRARDIKP*
Ga0102828_11268031	3300007559	Estuarine	MSRYNSNYGSHDQLQDLRKLNMELHHELDAIKRLLDETTKGLQQSQDELYLALEALRRAFP*
Ga0104986_14162	3300007734	Freshwater	MTRYNSNYGSHDQLQDLRKLNMELHHELDAIKRLLDETTKALHQSQDELLLAIEALVRARAIKP*
Ga0105747_12680122	3300007974	Estuary Water	MTRYNGNYGSHDQLQDLRKMNMELHHELDAIKRLLDEVTKELHQAQDELTLAIEALV
Ga0108970_109388491	3300008055	Estuary	METMTRYNGNYGSHDQLQDLRKMNMALHHELDAIKRLLDEVTKELHQAQDELTLAIEALVRARDGKP*
Ga0102829_10280494	3300009026	Estuarine	METMSRYNSNYGSHDQLQDLRKLNMELHHELDAIKRLLDETTKALHQSQDELLLAIEALVRARDIKP*
Ga0102860_10971152	3300009056	Estuarine	MTRYNGNYGSHDQLQDLRKMNMELHHELDAIKRLLDEVTKELHQAQDELTLAIEALVRARDGKP*
Ga0114973_101433202	3300009068	Freshwater Lake	MTRYNSNYGSHDQLQDLRKLNMGLHHELDAIKRLLDETTKELHQAQDELTLAIEALVRARDIRP*
Ga0114973_104410011	3300009068	Freshwater Lake	MTRYNSNYGSHEQLQDLRKLNMELHHELDAIKRLLDETTKELHQAQDELTLAIEALVRARDIKP*
Ga0114980_100354762	3300009152	Freshwater Lake	METMSRYDNNYGSHDQLQDLRKLNMGLHHELDAIKRLLDETTKELHQAQDELVLAIEALVRARDIKP*
Ga0114980_100460132	3300009152	Freshwater Lake	METMSRYNSNYGSHDQLQDLRKLNMELHHELDAIKRLLDETTKELHQSQDELTLAIEALVRARDIKP*
Ga0114968_1000985913	3300009155	Freshwater Lake	METMTRYNSNYGSHDQLQDLRKLNMELHHELDAIKRLLDETTKALHQSQDELLLAIEALVRARAIKP*
Ga0114968_101007173	3300009155	Freshwater Lake	MTRYNSNYGSHDQLQDLRKLNMELHHELDAIKRLLDQTTKELHQAQDELTLAIEALVRARDIKP*
Ga0114968_105876411	3300009155	Freshwater Lake	MSRYNSNYGSHDQLQDLRKLNMELHHELDAIKRLLDETTKALHQSQDELLLAIEALVRARAIKP*
Ga0114977_100015919	3300009158	Freshwater Lake	METMSRYNSDYGSHDQLQDLRKLNMELHHELDAIKRLLDETTKALHQSQDELLLAIEALVRARDIKP*
Ga0114978_102487201	3300009159	Freshwater Lake	MSRYNSNYGSHDQLQDLRKLNMELHHELDAIKRLLDETTKGLQQSQDELYLALEALRRQMP*
Ga0114978_103253662	3300009159	Freshwater Lake	MSRYNSNYGSHDQLQDLRKLNMELHHELDAIKRLLDETTKELHQAQDELTLAIEALVRAREIKP*
Ga0114981_101191612	3300009160	Freshwater Lake	MSRYNSNYGSHDQLQDLRKLNMELHHELDAIKRLLDETTKELHQSQDELTLAIEALVRARDIKP*
Ga0114981_104798612	3300009160	Freshwater Lake	MSRYDNNYGSHDQLQDLRKLNMGLHHELDAIKRLLDETTKELHQAQDELVLAIEALVRARDIKP*
Ga0114981_106887192	3300009160	Freshwater Lake	METMSRYNSNYGSHDQLQDLRKLNMELHHELDAVKRLLDETTKELHQAQDELTLAIEALVRARDIKP*
Ga0114966_100766093	3300009161	Freshwater Lake	METMSRYNSNYGSHDQLQDLRKVNMGLHHELDAIKRLLDETTKELQQAQDELTLAIEALVRARDIKP*
Ga0114966_107600041	3300009161	Freshwater Lake	MSRYNSNYGSHDQLQDLRKLNMELHHELDAIKRLLDETTKELHQAQDELTLAIEALVRARDIKP*
Ga0114970_102627911	3300009163	Freshwater Lake	MTRYNSNYGSHDQLQDLRKLYMGLHHELDAIKRLLDETTKELHQAQDELTLAIEALVRARDIRP*
Ga0114975_104385972	3300009164	Freshwater Lake	MSRYDSNYGSHDQLQDLRKLNMGLHHELDAIKRLLDETTKELHQAQDELVLAIEALVRARDIKP*
Ga0114969_106872071	3300009181	Freshwater Lake	MTRYNSNYGSHDQLQDLRKLNMGLHHELDAIKRLLDETTKELHQAQDKLTLAIEALIRARDIKP*
Ga0114974_1000209721	3300009183	Freshwater Lake	METMSRYDSNYGSHDQLQDLRKLNMGLHHELDAIKRLLDETTKELHQAQDELVLAIEALVRARDIKP*
Ga0133913_102751261	3300010885	Freshwater Lake	METMSRYDSNYGSHDQLQDLRKLNMGLHHELDAIKRLLDETTKELHQAQDELVLAIEA
Ga0133913_109629551	3300010885	Freshwater Lake	METMSRYDNNYGSHDQLQDLRKLNMGLHHELDAIKRLLDETTKELHQAQDELVLAIE
Ga0151515_1061221	3300011114	Freshwater	METMSRYNSYYGSHDQLQDLRKLNMELHHELDAIKRLLDETTKALHQSQDELLLAIEALVRVRDIKP*
Ga0153698_172720	3300011335	Freshwater	METMSRYNGNYGSHDQLQDLRKLNMELHHELDAIKRLLDETTKALHQSQDELLLAIEALVRARDGKP*
Ga0153702_160618	3300011337	Freshwater	MTRYNSNYGSHDQLQDLRKLNMELHHELDAIKRLLDETTKALHQSQDELLLAIEALVRARDGKP*
Ga0153699_152121	3300011338	Freshwater	METMSRYNSNYGSHDQLQDLRKLNMELHHELDAIKRLLDVTTKELHQAQDELTLAIEALVRARDIKP*
Ga0119960_10078662	3300014811	Aquatic	FPVTINKSNRGMETMSRYNSNYGSHDQLQDLRKLNMGLHHELDAIKRLLDETTKELHQAQDELTLAIEALVRARETKP*
Ga0181338_10500722	3300015050	Freshwater Lake	MTRYNGNYGSHDQLQDLRKMNMALHHELDAIKRLLDEVTKELHQAQDELTLAIEALVRARDGKP*
Ga0181350_10610652	3300017716	Freshwater Lake	MSRYNSNYGSHDNLQDLRKLNMELHHELDAIKRLLDETTKGLQQSQDELYLALEALRRQM
Ga0181356_11312361	3300017761	Freshwater Lake	MTRYNGNYGSHDQLQDLRKMNMALHHELDAIKRLLDEVTKELHQAQDELTLAIKALVRARDGKP
Ga0181349_10112186	3300017778	Freshwater Lake	METMTLYNGNYGSHDQLQDLRKMNMALHHELDAIKRLLDEVTKELHQAQDELTLAIEALVRARGDKP
Ga0181346_11967012	3300017780	Freshwater Lake	MTRYNSNYGSHDQLQDLRKLNMGLHHELDAIKRLLDETTKELHQAQDELTLAIEALVRAREIKP
Ga0181346_12224351	3300017780	Freshwater Lake	MSRYNSNYGSHDQLQDLRKLNMELHHELDAIKRLLDETTKELQQAQDELTLAIEALVRARGDKL
Ga0181348_11080092	3300017784	Freshwater Lake	MSRYNSNNGSHDQLQDLRKLNMELHHELDAIKRLLDETKKELQQAQDEITLIMQYLLEQK
Ga0181348_11399242	3300017784	Freshwater Lake	MTRYNGNYGSHDQLQDLRKMNMALHHELDAIKRLLDETTKALHQSQDELLLAIEALVRARDGKP
Ga0181348_11950942	3300017784	Freshwater Lake	MTRYNGNYGSHDELQDLRKMNIALQHELDAIKRLLDETTKELHQAQDELTLAIEALVRAR
Ga0181355_12829671	3300017785	Freshwater Lake	NFNNGPGFKSNRGLETMTRYNGNYGSHDQLQDLRKMNMALHHELDAIKRLLDEVTKELHQAQDELTLAIEALVRARDGKP
Ga0181359_10035522	3300019784	Freshwater Lake	METMTRYNGNYGSHDQLQDLRKMNMALHHELDAIKRLLDEVTKELHQAQDELTLAIEALVRARGDKP
Ga0181359_10172924	3300019784	Freshwater Lake	METMTRYNSNYGSHDQLQDLRKLNMGLHHELDAIKRLLDETTKELHQAQDELLLAIEALVRARDIKP
Ga0181359_10565322	3300019784	Freshwater Lake	MTRYNSNYGSHDQLQDLRKLNMGLHHELDAIKRLLDETTKELHQAQDELTLAIEALVRARDIKP
Ga0181359_10969122	3300019784	Freshwater Lake	MTRYNGNYGSHDQLQDLRKMNMALHHELDAIKRLLDEVTKELHQAQDELTLAIEALVRARGDKP
Ga0181359_11706001	3300019784	Freshwater Lake	MTRYNSNYGSHDQLQDLRKLNMELHHELDAIKRLLDETTKELHQAQDELTLAIEALVRAREIKP
Ga0181359_11828262	3300019784	Freshwater Lake	MTRYNGNYGSHDQLQDLRKMNMALHHELDAIKRLLDEVTKELHQAQDELTLAIEALVRARDGK
Ga0181359_12144201	3300019784	Freshwater Lake	MTRYNGNYGSHDQLQDLRKINMALHHELDAIKRLLDEVTKELHQAQDELTLAIEALVRARDGKP
Ga0208234_10311222	3300020515	Freshwater	MSRYNGNYGSHDQLQDLRKLNMELHHELDAIKRLLDETTKELHQAQDELTLAIEALVRARDIKP
Ga0222712_102603691	3300021963	Estuarine Water	MTRYNSNYGSHDQLQDLRKLNMGLHHELDAIKRLLDETTKELHQAQDELLLAIEALVRARGDKP
Ga0181354_12032531	3300022190	Freshwater Lake	MSRYNSNYGSHDQLQDLRKLNMGLHHELDAIKRLLDETTKELHQAQDELTLAIEALVRARDIKP
Ga0244775_1002138613	3300024346	Estuarine	METMSRYNSNYGSHDQLQDLRKLNMELHHELDAIKRLLDETTKALHQSQDELLLAIEALVRARDIKP
Ga0244775_100634292	3300024346	Estuarine	MSRYNSNYGSHDQLQDLRKLNMELHHELDAIKRLLDEVTKALQQSQDELYLALEALRRQI
Ga0244775_104217201	3300024346	Estuarine	MTRYNGNYGSHDQLQDLRKMNMALHHELDAIKGLLDEVTKELHQAQDELTLAIEALVRARDGKP
Ga0244775_108993661	3300024346	Estuarine	MSRYNSNYGSHDQLQDLRKLNMELHHELDAIKRLLDETTKGLQQSQDELYLALEALRRAF
Ga0244775_113141711	3300024346	Estuarine	YNGNYGSHDQLQDLRKLNMGLHHELDAIKRLLDETTKELHQAQDELTLAIEALVRARDGK
Ga0208426_10007421	3300025451	Aqueous	MSRYNSNYGSHDQLQDLRKLNMDLYHQLDEVKRLLDETTRALETSQDELYLALEALRRETPDWTHE
Ga0208800_10008541	3300027193	Estuarine	METMSRYNSNYGSHDQLQDLRKLNMELHHELDAIKRLLDETTKALHQSQDELLLAIEALVRARAIKP
Ga0208923_10329221	3300027320	Estuarine	MSRYNSNYGSHDQLQDLRKLNMELHHELDAIKRLLDETTKALHQSQDELLLAIEALVRARDIKP
Ga0208966_11415342	3300027586	Freshwater Lentic	MTRYNGNYGSHDQLQDLRKMNMALHHELDAIKRLLDEVTKELHQAQDELTLAIEALVRARDGKP
Ga0208974_10053959	3300027608	Freshwater Lentic	MSRYNSNYGSHDQLQDLRKLNMELHHELDAIKRLLDETTKSLQQSQDELYLALEALRRQM
Ga0208942_11850142	3300027627	Freshwater Lentic	MTRYNGNYGSHDQLQDLRKMNMSLHHELDAIKRLLDEVTKELHQAQDELTLAIEALVRARDGKP
Ga0208133_11223021	3300027631	Estuarine	MTRYNGNYGSHDQLQDLRKMNMALHHELDAIKGLLDEVTKELHQAQDELTLAIEALV
Ga0208975_10049643	3300027659	Freshwater Lentic	MTRYNSNYGSHEQLQDLRKLNMGLHHELDAIKRLLDETTKELHQAQDELTLAIEALVRARDVKP
Ga0208975_10717692	3300027659	Freshwater Lentic	MSRYNSNYGSHDQLQDLRKLNMGLHHELDAIKRLLDETTKELHQAQDELLLAIEALVRARDIKP
Ga0209443_11969392	3300027707	Freshwater Lake	MTRYNSNYGSHDQLQDLRKLNMGLHHELDAIKRLLDETTKELHQAQDELTLAIEALVRARGDKP
Ga0209443_13292551	3300027707	Freshwater Lake	KLETMTRYNSNYGSHDQLQDLRKLNMELHHELDAIKRLLDETTKELHQAQDELTLAIEALVRARDIKP
Ga0209297_10011949	3300027733	Freshwater Lake	MSRYNSDYGSHDQLQDLRKLNMELHHELDAIKRLLDETTKALHQSQDELLLAIEALVRARDIKP
Ga0209087_11364231	3300027734	Freshwater Lake	METMSRYNSDYGSHDQLQDLRKLNMELHHELDAIKRLLDETTKALHQSQDELLLAIEALVRARDIKP
Ga0209190_11212812	3300027736	Freshwater Lake	MTRYNSNYGSHDQLQDLRKLNMELHHELDAIKRLLDETTKALHQSQDELLLAIEALVRARAIKP
Ga0209190_11688851	3300027736	Freshwater Lake	MSRYNSNYGSHDQLQDLRKLNMELHHELDAIKRLLDETTKALHQSQDELLLAIEALVRARAIKP
Ga0209597_12525381	3300027746	Freshwater Lake	MTRYNSNYGSHDQLQDLRKLNMGLHHELDAIKRLLDETTKELHQAQDELTLAIEALVRARDIRP
Ga0209596_100194119	3300027754	Freshwater Lake	MSRYNSNYGSHDQLQDLRKVNMGLHHELDAIKRLLDETTKELQQAQDELTLAIEALVRARDIKP
Ga0209596_10024341	3300027754	Freshwater Lake	MTRYNSNYGSHDQLQDLRKLNMELHHELDAIKRLLDQTTKELHQAQDELTLAIEALVRARDIKP
Ga0209296_10668544	3300027759	Freshwater Lake	METMSRYDSNYGSHDQLQDLRKLNMGLHHELDAIKRLLDETTKELHQAQDELVLAIEALVRARDIKP
Ga0209598_101420351	3300027760	Freshwater Lake	MTRYNSNYGSHEQLQDLRKLNMELHHELDAIKRLLDETTKELHQAQDELTLAIEALVRARDIKP
Ga0209246_100696001	3300027785	Freshwater Lake	MSRYNSNYGSHDQLQDLRKLNMELHHELDAIKRLLDETTKGLQQSQDELYLALEALRRQI
Ga0209246_101349922	3300027785	Freshwater Lake	MSRYNSNYGSHDQLQDLRKLNMELHHELDAIKRLLDETKKELQQAQDEITLIMQYLLEQK
Ga0209246_103205042	3300027785	Freshwater Lake	MTRYNSNYGSHDQLQDLRKLNMELHHELDAIKRLLDETTKELHQAQDELTLAIEALVRARDIKP
Ga0209107_1000199111	3300027797	Freshwater And Sediment	MTRYNSNYGSHDQLQDLRKLNMELHHELDAIKRLLDETTKGLQQSQDELYLALEALRRAL
Ga0209354_103977401	3300027808	Freshwater Lake	SNYGSHDQLQDLRKLNMELHHELDAIKRLLDETTKELHQAQDELTLAIEALVRAREIKP
Ga0209191_13714731	3300027969	Freshwater Lake	RYDSNYGSHDQLQDLRKLNMGLHHELDAIKRLLDETTKELHQAQDELVLAIEALVRARDIKP
Ga0209298_100261315	3300027973	Freshwater Lake	METMSRYNSNYGSHDQLQDLRKLNMELHHELDAIKRLLDETTKELHQSQDELTLAIEALVRARDIKP
Ga0209299_12562842	3300027974	Freshwater Lake	MSRYDNNYGSHDQLQDLRKLNMGLHHELDAIKRLLDETTKELHQAQDELVLAIEALVRARDIKP
Ga0304730_10387905	3300028394	Freshwater Lake	METMSRYNSNYGSHDQLQDLRKVNMGLHHELDAIKRLLDETTKELQQAQDELTLAIEALVRARDIKP
Ga0315291_106708142	3300031707	Sediment	MSRYNSNYGSHDQLQDLRKLNMELHHELDAIKRLLDETTKALHQSQDELLLAIEALVRTRAIKP
Ga0315291_112485141	3300031707	Sediment	YGSHDQLQDLRKLNMELHHELDAIKRLLDETTKGLQQSQDELYLALEALRRQMP
Ga0315293_108553821	3300031746	Sediment	MTHYNSNYGSHDQLQDLRKLNMELHHELDAIKRLLDETTKALHQSQDELLLAIEALVRARAIKP
Ga0315288_111689091	3300031772	Sediment	MSRYNSNYGSHDQLQDLRKLNMELHHELDAIKRLLDEVTKALHQSQDELYLALEALRKEF
Ga0315288_117383821	3300031772	Sediment	MTRYNSNYGSHDQLQDLRKLNMELHHELDAIKRLLDETTKELHQAQDELLLAIEALVRARDGKP
Ga0315285_105290711	3300031885	Sediment	MSRYNSNYGSHDQLQDLRKLNMELHHELDAIKRLLDETTKALHQSQDELLLAIEA
Ga0315294_108464792	3300031952	Sediment	MTRYNGNYGSHDQLQDLRKMNMELHHELDAIKRLLDEVTKELHQAQDELTLAIEALVRARDGKP
Ga0315274_102252181	3300031999	Sediment	METMTRYNSNYGSHDQLQDLRKLNMELHHELDAIKRLLDETTKELHQAQDELLLAIEALVRARDGKP
Ga0315274_110479561	3300031999	Sediment	YRDMETMSRYNSNYGSHDQLQDLRKLNMELHHELDAIKRLLDETTKALHQSQDELLLAIEALVRARAIKP
Ga0315272_106768141	3300032018	Sediment	MTRYNSNYGSHDQLQDLRKLNMGLHHELDAIKRLLDETTKELQQAQDELTLAIEALVRARGDKP
Ga0315284_104780531	3300032053	Sediment	METMTRYNGNYGSHDQLQDLRKMNMALHHELDAIKRLLDEVTKELHQAQDELTLAIEALVRARDGKP
Ga0334982_0109820_829_1011	3300033981	Freshwater	MSRYNSNYGSHDQLQDLRKLNMELHHELDAIKRLLDETTKSLQQSQDELYLALEALRRQI
Ga0334994_0136643_772_966	3300033993	Freshwater	MTRYNGNYGSHDQLQDLRKLNMELHHELDAIKRLLDETTKELHQAQDELTLAIEALVRARDIKP
Ga0335003_0329448_507_674	3300033995	Freshwater	SNYGSHDQLQDLRKLNMELHHELDAIKRLLDETTKSLQQSQDELYLALEALRRQI
Ga0335024_0382944_368_562	3300034051	Freshwater	MTRYNSNYGSHDQLQDLRKLNMGLHHELDAIKRLLDETTKELHQAQDELTLAIEALVRARDAKP
Ga0334987_0230781_565_750	3300034061	Freshwater	MSRYNSNYGSHDQLQDLRKLNMELHHELDAIKRLLDETTKSLQQSQDELYLALEALRRAM
Ga0335001_0007894_1_186	3300034064	Freshwater	TMSRYNSNYGSHDQLQDLRKLNMELHHELDAIKRLLDETTKSLQQSQDELYLALEALRRQ
Ga0335020_0056938_1115_1309	3300034082	Freshwater	MTRYNSNYGSHDQLQDLRKLNMGLHHELDAIKRLLDETTKELHQAQDELLLAIEALVRARDIKP
Ga0335012_0567443_173_367	3300034093	Freshwater	MSRYNGNYGSHDQLQDLRKLNMELHHELDAIKRLLDETTTELHQAQDELTLAIEALVRARGDKP
Ga0335035_0072085_1680_1874	3300034105	Freshwater	MMSRYNSNWGSHDQLQDLRKANMALHRELDATKKLLSDTLQDLAQAQDELVLALEALARVGTDK
Ga0335035_0333829_3_173	3300034105	Freshwater	NSNYGSHDQLQDLRKLNMELHHELDAIKRLLDETTKSLQQSQDELYLALEALRRQI
Ga0335033_0264795_2_190	3300034117	Freshwater	TMSRYNSNYGSHDQLQDLRKLNMELHHELDAIKRLLDETTKSLQQSQDELYLALEALRRQMP
Ga0335060_0410656_1_174	3300034122	Freshwater	YNSNYGSHDQLQDLRKLNMELHHELDAIKRLLDETTKSLQQSQDELYLALEALRRQI

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F063688

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences