NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F063652

Metagenome Family F063652

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F063652
Family Type Metagenome
Number of Sequences 129
Average Sequence Length 52 residues
Representative Sequence SVEAIKGFLAIIFAVLSGSENFCGPERIRIKPNANGIQDRTGQIGFKATKSK
Number of Associated Samples 55
Number of Associated Scaffolds 129

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 97.67 %
% of genes from short scaffolds (< 2000 bps) 62.79 %
Associated GOLD sequencing projects 34
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (90.698 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous
(86.047 % of family members)
Environment Ontology (ENVO) Unclassified
(97.674 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(96.124 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 28.85%    β-sheet: 1.92%    Coil/Unstructured: 69.23%
Feature Viewer
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 129 Family Scaffolds
PF08401ArdcN 3.88
PF12844HTH_19 0.78
PF00145DNA_methylase 0.78

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 129 Family Scaffolds
COG4227Antirestriction protein ArdCReplication, recombination and repair [L] 3.88
COG0270DNA-cytosine methylaseReplication, recombination and repair [L] 0.78


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A90.70 %
All OrganismsrootAll Organisms9.30 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000116|DelMOSpr2010_c10021874Not Available3106Open in IMG/M
3300000117|DelMOWin2010_c10117964Not Available934Open in IMG/M
3300006025|Ga0075474_10014569Not Available2937Open in IMG/M
3300006025|Ga0075474_10023039All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria2239Open in IMG/M
3300006025|Ga0075474_10053225Not Available1366Open in IMG/M
3300006026|Ga0075478_10022859Not Available2101Open in IMG/M
3300006026|Ga0075478_10091357Not Available976Open in IMG/M
3300006637|Ga0075461_10016828All Organisms → cellular organisms → Bacteria2413Open in IMG/M
3300006637|Ga0075461_10028456Not Available1841Open in IMG/M
3300006637|Ga0075461_10067732Not Available1143Open in IMG/M
3300006637|Ga0075461_10203365Not Available592Open in IMG/M
3300006637|Ga0075461_10241719Not Available531Open in IMG/M
3300006802|Ga0070749_10060462Not Available2287Open in IMG/M
3300006802|Ga0070749_10062385Not Available2246Open in IMG/M
3300006802|Ga0070749_10074559Not Available2031Open in IMG/M
3300006802|Ga0070749_10081485Not Available1932Open in IMG/M
3300006802|Ga0070749_10118942Not Available1552Open in IMG/M
3300006802|Ga0070749_10168665Not Available1266Open in IMG/M
3300006802|Ga0070749_10384640Not Available776Open in IMG/M
3300006802|Ga0070749_10479423Not Available679Open in IMG/M
3300006802|Ga0070749_10536290Not Available635Open in IMG/M
3300006802|Ga0070749_10607716Not Available589Open in IMG/M
3300006802|Ga0070749_10705507Not Available539Open in IMG/M
3300006802|Ga0070749_10776550Not Available509Open in IMG/M
3300006810|Ga0070754_10031991Not Available2925Open in IMG/M
3300006810|Ga0070754_10038261Not Available2621Open in IMG/M
3300006810|Ga0070754_10040691Not Available2522Open in IMG/M
3300006810|Ga0070754_10099524Not Available1438Open in IMG/M
3300006810|Ga0070754_10124219Not Available1255Open in IMG/M
3300006810|Ga0070754_10133690All Organisms → cellular organisms → Bacteria1198Open in IMG/M
3300006810|Ga0070754_10167935Not Available1039Open in IMG/M
3300006810|Ga0070754_10208693Not Available907Open in IMG/M
3300006867|Ga0075476_10023602Not Available2631Open in IMG/M
3300006867|Ga0075476_10057009All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae1566Open in IMG/M
3300006870|Ga0075479_10144788Not Available971Open in IMG/M
3300006870|Ga0075479_10151682Not Available945Open in IMG/M
3300006874|Ga0075475_10032446Not Available2520Open in IMG/M
3300006874|Ga0075475_10043952Not Available2119Open in IMG/M
3300006874|Ga0075475_10191628Not Available879Open in IMG/M
3300006916|Ga0070750_10098538Not Available1357Open in IMG/M
3300006916|Ga0070750_10224462Not Available823Open in IMG/M
3300006919|Ga0070746_10035677Not Available2652Open in IMG/M
3300006919|Ga0070746_10040078Not Available2480Open in IMG/M
3300006919|Ga0070746_10094323Not Available1499Open in IMG/M
3300006919|Ga0070746_10296603Not Available743Open in IMG/M
3300006919|Ga0070746_10307427Not Available727Open in IMG/M
3300006919|Ga0070746_10402537Not Available613Open in IMG/M
3300007234|Ga0075460_10019672Not Available2654Open in IMG/M
3300007234|Ga0075460_10105553Not Available1009Open in IMG/M
3300007234|Ga0075460_10201198Not Available677Open in IMG/M
3300007234|Ga0075460_10215395Not Available649Open in IMG/M
3300007234|Ga0075460_10254630Not Available584Open in IMG/M
3300007234|Ga0075460_10323208Not Available503Open in IMG/M
3300007344|Ga0070745_1024914Not Available2613Open in IMG/M
3300007344|Ga0070745_1027606Not Available2460Open in IMG/M
3300007344|Ga0070745_1053735Not Available1651Open in IMG/M
3300007345|Ga0070752_1030718All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium2613Open in IMG/M
3300007345|Ga0070752_1094137Not Available1291Open in IMG/M
3300007346|Ga0070753_1092260Not Available1190Open in IMG/M
3300007346|Ga0070753_1301493Not Available572Open in IMG/M
3300007538|Ga0099851_1052709Not Available1595Open in IMG/M
3300007539|Ga0099849_1022707Not Available2725Open in IMG/M
3300007539|Ga0099849_1135717Not Available960Open in IMG/M
3300007539|Ga0099849_1367049Not Available509Open in IMG/M
3300007541|Ga0099848_1280052Not Available577Open in IMG/M
3300007541|Ga0099848_1290878All Organisms → Viruses562Open in IMG/M
3300007542|Ga0099846_1098682Not Available1076Open in IMG/M
3300007542|Ga0099846_1263286Not Available596Open in IMG/M
3300007640|Ga0070751_1028068All Organisms → Viruses → Predicted Viral2617Open in IMG/M
3300007640|Ga0070751_1084267Not Available1331Open in IMG/M
3300007960|Ga0099850_1026055All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria2573Open in IMG/M
3300008012|Ga0075480_10037239Not Available2913Open in IMG/M
3300008012|Ga0075480_10056159All Organisms → Viruses → Predicted Viral2292Open in IMG/M
3300009027|Ga0102957_1121180Not Available919Open in IMG/M
3300010296|Ga0129348_1107078Not Available982Open in IMG/M
3300010297|Ga0129345_1017293Not Available2805Open in IMG/M
3300010297|Ga0129345_1082047Not Available1207Open in IMG/M
3300010297|Ga0129345_1354014Not Available505Open in IMG/M
3300010299|Ga0129342_1146932Not Available861Open in IMG/M
3300010300|Ga0129351_1092141Not Available1220Open in IMG/M
3300010300|Ga0129351_1381564Not Available527Open in IMG/M
3300010318|Ga0136656_1019776Not Available2446Open in IMG/M
3300010368|Ga0129324_10027559Not Available2745Open in IMG/M
3300010368|Ga0129324_10039294Not Available2213Open in IMG/M
3300010368|Ga0129324_10052838Not Available1852Open in IMG/M
3300010368|Ga0129324_10172410Not Available890Open in IMG/M
3300010368|Ga0129324_10324912Not Available602Open in IMG/M
3300017951|Ga0181577_10521684Not Available741Open in IMG/M
3300021958|Ga0222718_10094487Not Available1775Open in IMG/M
3300022071|Ga0212028_1088346Not Available578Open in IMG/M
3300022168|Ga0212027_1027395Not Available761Open in IMG/M
3300022176|Ga0212031_1065199Not Available617Open in IMG/M
3300022187|Ga0196899_1015401Not Available2915Open in IMG/M
3300022187|Ga0196899_1020618All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria2425Open in IMG/M
3300022187|Ga0196899_1021113Not Available2388Open in IMG/M
3300022187|Ga0196899_1022134Not Available2322Open in IMG/M
3300022198|Ga0196905_1005804Not Available4318Open in IMG/M
3300022198|Ga0196905_1017180Not Available2302Open in IMG/M
3300022200|Ga0196901_1088046Not Available1097Open in IMG/M
3300025543|Ga0208303_1078729Not Available734Open in IMG/M
3300025610|Ga0208149_1067537Not Available897Open in IMG/M
3300025630|Ga0208004_1019142Not Available2153Open in IMG/M
3300025630|Ga0208004_1031445Not Available1550Open in IMG/M
3300025653|Ga0208428_1070707Not Available1023Open in IMG/M
3300025655|Ga0208795_1007705Not Available3956Open in IMG/M
3300025671|Ga0208898_1024076Not Available2612Open in IMG/M
3300025674|Ga0208162_1030583Not Available1974Open in IMG/M
3300025674|Ga0208162_1137607Not Available682Open in IMG/M
3300025751|Ga0208150_1038507Not Available1656Open in IMG/M
3300025759|Ga0208899_1022849Not Available3086Open in IMG/M
3300025759|Ga0208899_1027987All Organisms → Viruses → Predicted Viral2685Open in IMG/M
3300025759|Ga0208899_1048925Not Available1823Open in IMG/M
3300025759|Ga0208899_1053502Not Available1714Open in IMG/M
3300025769|Ga0208767_1034123Not Available2578Open in IMG/M
3300025769|Ga0208767_1034679Not Available2547Open in IMG/M
3300025815|Ga0208785_1012561Not Available2984Open in IMG/M
3300025828|Ga0208547_1035773Not Available1830Open in IMG/M
3300025840|Ga0208917_1042389Not Available1835Open in IMG/M
3300025853|Ga0208645_1033426All Organisms → Viruses → Predicted Viral2637Open in IMG/M
3300025853|Ga0208645_1176119Not Available783Open in IMG/M
3300025889|Ga0208644_1024990Not Available3686Open in IMG/M
3300025889|Ga0208644_1050161Not Available2320Open in IMG/M
3300025889|Ga0208644_1253958Not Available725Open in IMG/M
3300025889|Ga0208644_1338178Not Available580Open in IMG/M
3300025889|Ga0208644_1352738Not Available560Open in IMG/M
3300034374|Ga0348335_024474Not Available2801Open in IMG/M
3300034374|Ga0348335_086501Not Available1036Open in IMG/M
3300034375|Ga0348336_029319Not Available2628Open in IMG/M
3300034375|Ga0348336_080961Not Available1174Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous86.05%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient10.08%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine1.55%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh0.78%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water0.78%
Pond WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water0.78%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000116Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010EnvironmentalOpen in IMG/M
3300000117Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010EnvironmentalOpen in IMG/M
3300006025Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006026Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006637Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNAEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01EnvironmentalOpen in IMG/M
3300006867Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300006870Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNAEnvironmentalOpen in IMG/M
3300006874Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNAEnvironmentalOpen in IMG/M
3300006916Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24EnvironmentalOpen in IMG/M
3300006919Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21EnvironmentalOpen in IMG/M
3300007234Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNAEnvironmentalOpen in IMG/M
3300007344Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4EnvironmentalOpen in IMG/M
3300007345Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30EnvironmentalOpen in IMG/M
3300007346Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31EnvironmentalOpen in IMG/M
3300007538Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007539Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaGEnvironmentalOpen in IMG/M
3300007541Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaGEnvironmentalOpen in IMG/M
3300007542Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaGEnvironmentalOpen in IMG/M
3300007640Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28EnvironmentalOpen in IMG/M
3300007960Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaGEnvironmentalOpen in IMG/M
3300008012Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300009027Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_H2O_MGEnvironmentalOpen in IMG/M
3300010296Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_DNAEnvironmentalOpen in IMG/M
3300010297Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_20_0.8_DNAEnvironmentalOpen in IMG/M
3300010299Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.2_DNAEnvironmentalOpen in IMG/M
3300010300Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_DNAEnvironmentalOpen in IMG/M
3300010318Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.8_DNAEnvironmentalOpen in IMG/M
3300010368Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNAEnvironmentalOpen in IMG/M
3300017951Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300021958Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27DEnvironmentalOpen in IMG/M
3300022071Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v2)EnvironmentalOpen in IMG/M
3300022168Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v2)EnvironmentalOpen in IMG/M
3300022176Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v2)EnvironmentalOpen in IMG/M
3300022187Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v3)EnvironmentalOpen in IMG/M
3300022198Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300022200Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300025543Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025610Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025630Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025653Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025655Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025671Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (SPAdes)EnvironmentalOpen in IMG/M
3300025674Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025751Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025759Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)EnvironmentalOpen in IMG/M
3300025769Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)EnvironmentalOpen in IMG/M
3300025815Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025828Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025840Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025853Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (SPAdes)EnvironmentalOpen in IMG/M
3300025889Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)EnvironmentalOpen in IMG/M
3300034374Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v4)EnvironmentalOpen in IMG/M
3300034375Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 (v4)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
DelMOSpr2010_1002187413300000116MarineEAIKGFLAIIFAVLSGSENFCGLERIRIKPNANEIQDRMSQIGFKAAKSK*
DelMOWin2010_1011796413300000117MarineSSSVMVCRQSVEAIKGFLAIIFAVLSGSEIFCGLERIRIKPNANGIQDRTGQIGFKATKSK*
Ga0075474_1001456913300006025AqueousCRQSVEAIKGFLAIIFAVLSGSENFCGLERIRIKPNANGIQDQAGRMGFIAANQW*
Ga0075474_1002303963300006025AqueousCRQSVEAIKGFLAIIFAVLSGSENFCGLERIRIKPNANGMQDQAGRMGFIAANQW*
Ga0075474_1005322513300006025AqueousVCRQSVEAIKGFLAIIFAVLSGSENFCGHERIRIKPNANGIQDQTGQIGFKATKNK*
Ga0075478_1002285973300006026AqueousRQSVEAIKGFLAIIFAVLSGSENFCGPERIRIKPNANGIQDRTGQIGFKATKSK*
Ga0075478_1009135713300006026AqueousVMVCRQSVEAIKGFLAIIFAVLSGSENFCGLERIRIKPNANEIQDRTGQIGFKATKSK*
Ga0075461_1001682813300006637AqueousKGFLAIIFAVLSGSENFCGHERIRIKPNANEIQDRTSQIGFKAAKSN*
Ga0075461_1002845613300006637AqueousKGFLAIIFAVLSGSENFCGPERIRIKPNANGIQDRTGQIGFKATKSK*
Ga0075461_1006773213300006637AqueousVEAIKGFLAIIFAVLSGSENFCGHERIRIKPNANEIQDRTGQIGFMAANRW*
Ga0075461_1020336523300006637AqueousVEAIKGFLAIIFAVLSGSENFCGPERIRIKPNANGIQDQTGQIGFKAMKSK*
Ga0075461_1024171913300006637AqueousVEAIKGFLAIIFAVLSGSENFCGHERIRIKPNANEIQDRTGQIGLKAAKSK*
Ga0070749_1006046273300006802AqueousSVEAIKGFLAIIFAVLSGSENFCGHERIRIKPNANEIQDRTGQIGFKAAKSK*
Ga0070749_1006238563300006802AqueousSVEAIKGFLAIIFAVLSGSENFCGPERIRIKPNANGIQDRTSQIGFKATKSK*
Ga0070749_1007455953300006802AqueousQSVEAIKGFLAIIFAVLSGSENFCGPERIRIKPNANEIQDRTSQIGFKATKSK*
Ga0070749_1008148513300006802AqueousIKGFLAIIFAVLSGSENFCGHERIRIKPNANEIQDRTSQIGFKAAKSN*
Ga0070749_1011894213300006802AqueousAIKGFLAIIFAVLSGSENFCGPERIRIKPNANGIQDRTGQIGFKATKSK*
Ga0070749_1016866543300006802AqueousEAIKGFLAIIFAVLSGSENFCGLERIRIKPNANEIQDRTGQIGFKATKSK*
Ga0070749_1038464033300006802AqueousMVCRQSVEAIKGFLAIIFAVLSGSENFCGPERIRIKPNANGMQDQTGQIRFKATKSK*
Ga0070749_1047942323300006802AqueousVEAIKGFLAIIFAVLSGSENFCGLERIRIKPNANGIQDQAGRMGFIAANQW*
Ga0070749_1053629023300006802AqueousVEAIKGFLAIIFAVLSGSENFCGPERIRIKPNANEIQDRTGQIGFKAAKSK*
Ga0070749_1060771613300006802AqueousQSVEAIKGFLAIIFAVLSGSENFCGPERIRIKPNANEIQDQTGQIGFKAANCK*
Ga0070749_1070550713300006802AqueousQSVEAIKGFLAIIFAVLSGSENFCGPERIRIKPNANGIQDQTGQIGFKAMKSK*
Ga0070749_1077655013300006802AqueousAIIFAVLSGSENFCGHERIRIKPNANEIQDRTSQIGFKAAKSK*
Ga0070754_1003199113300006810AqueousQSVEAIKGFLAIIFAVLSGSENFCGLERIRIKPNANGIQDQAGRMGFIAANQW*
Ga0070754_1003826113300006810AqueousIKGFLAIIFAVLSGSENFCGPERIRIKPNANGIQDQTGQIGFKAMKSK*
Ga0070754_1004069183300006810AqueousSVEAIKGFLAIIFAVLSGSENFCGPERIRIKPNANGIQDQTGQIGFKATKSK*
Ga0070754_1009952413300006810AqueousQSVEAIKGFLAIIFAVLSGSENFCGPERIRIKPNANGIQDRTGQIGFKATKSK*
Ga0070754_1012421943300006810AqueousMVCRQSVEAIKGFLAIIFAVLSGSENFCGLERIRIKPNANEIQDRTGQIGFKATKSK*
Ga0070754_1013369033300006810AqueousMSGSENFCGPERIRIKPNANGIQDQTGQIGFKASKSK*
Ga0070754_1016793513300006810AqueousQSVEAIKGFLAIIFAVLSGSENFCGLERIRIKPNANGIQDQTGRMGFIAANQW*
Ga0070754_1020869343300006810AqueousMVCRQSVEAIKGFLAIIFAVLSGSENFCGPERIRIKPNANEIQDRIGQIGFKAAKSK*
Ga0075476_1002360273300006867AqueousSVEAIKGFLAIIFAVLSGSENFCGPERIRIKPNANGIQDQTGQIGFKAMKSK*
Ga0075476_1005700913300006867AqueousSGSENFCGPERIRIKPNANGIQDQTGQIGFKASKSK*
Ga0075479_1014478843300006870AqueousVCRQSVEAIKGFLAIIFAVLSGSENFCGLERIRIKPNANEIQDRTGQIGFKATKSK*
Ga0075479_1015168233300006870AqueousVCRQSVEAIKGFLAIIFAVLSGSENFCGLERIRIKPNANGIQDQAGRMGFIAANQW*
Ga0075475_1003244683300006874AqueousVMVCRQSVEAIKGFLAIIFAVLSGSENFCGLERIRIKPNANGIQDQAGRMGFIAANQW*
Ga0075475_1004395213300006874AqueousSSVMVCRQSVEAIKGFLAIIFAVLSGSENFCGPERIRIKPNANGIQDRTGQIGFKATKSK
Ga0075475_1019162823300006874AqueousRQSVEAIKGFLAIIFAVLSGSENFCGHERIRIKPNANGIQDQTGQIGFKATKNK*
Ga0070750_1009853853300006916AqueousMVCRQSVEAIKGFLAIIFAVLSGSENFCGHERIRIKPNANGMQDQVGRMGFIAANQW*
Ga0070750_1022446223300006916AqueousEAIKGFLAIIFAVLSGSENFCGPERIRIKPNANEIQDRTGQIGFKATKSK*
Ga0070746_1003567713300006919AqueousSVEAIKGFLAIIFAVLSGSENFCGPERIRIKPNANEIQDRTGQIGFKATKSK*
Ga0070746_1004007863300006919AqueousSVEAIKGFLAIIFAVLSGSENFCGHERIRIKPNANEIQDRTGQIGFKATKSK*
Ga0070746_1009432343300006919AqueousRQSVEAIKGFLAIIFAVLSGSENFCGPERIRIKPNANEIQDRTSQIGFKATKSK*
Ga0070746_1029660333300006919AqueousLSGSENFCGPERIRIKPNANGIQDQTSQIGFKAANCK*
Ga0070746_1030742713300006919AqueousSVEAIKGFLAIIFAVLSGSENFCGPERIRIKPNANGMQDQTGQIRFKATKSK*
Ga0070746_1040253713300006919AqueousSVEAIKGFLAIIFAVLSGSENFCGPERIRIKPNANGIQDRTGQIGFKATKSK*
Ga0075460_1001967253300007234AqueousRQSVEAIKGFLAIIFAVLSGSENFCGPERIRIKPNANEIQDRTGQIGFKATKSK*
Ga0075460_1010555313300007234AqueousGLLSPKKSSSVMVCRQSVEAIKGFLAIIFAVLSGSENFCGLERIRIKPNANGIQDQAGRMGFIAANQW*
Ga0075460_1020119823300007234AqueousVLSGSENFCGHERIRIKPNANEIQDRTGQIGFKAAKSK*
Ga0075460_1021539513300007234AqueousLAIIFAVLSGSENFCGPERIRIKPNANGIQDQTGQIGFKAAKSK*
Ga0075460_1025463013300007234AqueousLAIIFAVLSGSENFCGPERIRIKPNANGIQDQTGQIGFKAMKSK*
Ga0075460_1032320813300007234AqueousKGFLAIIFAVLSGSENFCGHERIRIKPNANEIQDRTSQIGFKAAKSK*
Ga0070745_102491413300007344AqueousFLAIIFAVLSGSENFCGPERIRIKPNANGIQDQTGQIGFKAMKSK*
Ga0070745_102760613300007344AqueousQSVEAIKGFLAIIFAVLSGSENFCGPERIRIKPNANGIQDQTGQIGFKATKSK*
Ga0070745_105373513300007344AqueousRQSVEAIKGFLAIIFAVLSGSENFCGLERIRIKPNANGIQDQAGRMGFIAANQW*
Ga0070752_103071873300007345AqueousVEAIKGFLAIIFAVLSGSENFCGHERIRIKPNANEIQDRTSQIGFKAANCK*
Ga0070752_109413713300007345AqueousQSVEAIKGFLAIIFAVLSGSENFCGHERIRIKPNANGIQDRTGQIGFKATKSK*
Ga0070753_109226043300007346AqueousRQSVEAIKGFLAIIFAVLSGSENFCGLERIRIKPNANEIQDRTGQIGFKATKSK*
Ga0070753_130149313300007346AqueousRQSVEAIKGFLAIIFAVLSGSENFCGPERIRIKPNANEIQDRIGQIGFKAAKSK*
Ga0099851_105270913300007538AqueousIKGFLAIIFAVLSGSENFCGPERIRIKPNANEIQDRTGQIGFKTANCNQNYNYVQIC*
Ga0099849_102270713300007539AqueousVEAIKGFLAIIFAVLSGSENFCGLERIRIKPNANGIQDQTGQIGFKATKSK*
Ga0099849_113571713300007539AqueousEAIKGFLAIIFAVLSGSENFCGPERIRIKPNANEIQDRTSQIGFKATKSK*
Ga0099849_136704913300007539AqueousKGFLAIIFAVLSGSENFCGLERIRIKPNANEIQDRTGQIGLKAANCK*
Ga0099848_128005223300007541AqueousSVEAIKGFLAIIFAVLSGSENFCGPERIRIKPNANGIQDRTGQIGLKAANCK*
Ga0099848_129087823300007541AqueousSVEAIKGFLAIIFAVLSGSENFCGPERIRIKPNANGIQDRTSQIGFKAANCK*
Ga0099846_109868213300007542AqueousIKGFLAIIFAVLSGSENFCGPERIRIKPNANEIQDRTGQIGFKATKSK*
Ga0099846_126328623300007542AqueousSVEAIKGFLAIIFAVLSGSENFCGPERIRIKPNANEIQDRTGQIGLKATKNK*
Ga0070751_102806813300007640AqueousRQSVEAIKGFLAIIFAVLSGSENFCGLERIRIKPNANGMQDQAGRMGFIAANQW*
Ga0070751_108426713300007640AqueousRQSVEAIKGFLAIIFAVLSGSENFCGLERIRIKPNANEIQDRTSQIGFKATKSK*
Ga0099850_102605513300007960AqueousPGLLSPKKSSSVMVCRQSVEAIKGFLAIIFAVLSGSENFCGLERIRIKPNANGMQDQAGRMGFIAANQW*
Ga0075480_1003723913300008012AqueousGFLAIIFAVLSGSENFCGLERIRIKPNANGIQDQAGRMGFIAANQW*
Ga0075480_1005615963300008012AqueousVCRQSVEAIKGFLAIIFAVLSGSENFCGLERIRIKPNANGMQDQAGRMGFIAANQW*
Ga0102957_112118013300009027Pond WaterKSSSVMVCRQSVEAIKGFLAIIFAVLSGSENFCGPERIRIKPNANEIKDQTGQIGFKATKSK*
Ga0129348_110707813300010296Freshwater To Marine Saline GradientMVCRQSVEAIKGFLAIIFAVLSGSENFCGPERIRIKPNANEIQDRTSQIGFKATKSK*
Ga0129345_101729363300010297Freshwater To Marine Saline GradientSSVMVCRQSVEAIKGFLAIIFAVLSGSENFCGLERIRIKPNANGIQDQTGQIGFKATKSK
Ga0129345_108204743300010297Freshwater To Marine Saline GradientVEAIKGFLAIIFAVLSGSENFCGLERIRIKPNANEIQDRTSQIGFKATKSK*
Ga0129345_135401413300010297Freshwater To Marine Saline GradientGLLSPKKSSSVMVCRQSVEAIKGFLAIIFAVLSGSENFCGLERIRIKPNANGMQDQAGRMGFIAANQW*
Ga0129342_114693213300010299Freshwater To Marine Saline GradientKGFLAIIFAVLSGSENFCGHERIRIQPNANEIQDRTSQIGFKAAKSN*
Ga0129351_109214113300010300Freshwater To Marine Saline GradientIKGFLAIIFAVLSGSENFCGPERIRIKPNANEIQDRTGQIGFKAAKSK*
Ga0129351_138156413300010300Freshwater To Marine Saline GradientIKGFLAIIFAVLSGSENFCGPERIRIKPNANEIQDRTGQIGFKAANCK*
Ga0136656_101977683300010318Freshwater To Marine Saline GradientEAIKGFLAIIFAVLSGSENFCGPERIRIKPNANEIQDRTGQIGFKAANCK*
Ga0129324_1002755913300010368Freshwater To Marine Saline GradientIKGFLAIIFAVLSGSENFCGPERIRIKPNANEIQDRTGQIGLKATKNK*
Ga0129324_1003929413300010368Freshwater To Marine Saline GradientVCRQSVEAIKGFLAIIFAVLSGSENFCGLERIRIKPNANEIQDRTGQIGFKAMKSK*
Ga0129324_1005283853300010368Freshwater To Marine Saline GradientKKSSSVMVCRQSVEAIKGFLAIIFAVLSGSENFCGHERIRIKPNANEIQDRTGQIGFKAAKSK*
Ga0129324_1017241033300010368Freshwater To Marine Saline GradientAIIFAVLSGSENFCGPERIRIKPNANGIQDQTGQIGFKAAKSK*
Ga0129324_1032491223300010368Freshwater To Marine Saline GradientMVCRQSVEAIKGFLAIIFAVLSGSENFCGPERIRIQPNANEIQDRTSQIGFKAAKSK*
Ga0181577_1052168413300017951Salt MarshKGFLAIIFAVLSGSENFCGPERIRIKPNANGIQDRTGQIGFKAMKSK
Ga0222718_1009448713300021958Estuarine WaterGSENFCGPERIRIKPNANGIQDQTGQIGFKAANWW
Ga0212028_108834613300022071AqueousSGSENFCGHERIRIKPNANGIQDQTGQIGFKATKNK
Ga0212027_102739513300022168AqueousEAIKGFLAIIFAVLSGSENFCGHERIRIKPNANGIQDQTGQIGFKATKNK
Ga0212031_106519913300022176AqueousERGICRQSVEAIKGFLAIIFAVLSGSENFCGPERIRIKPNANGIQDQTGQIGFKATNCK
Ga0196899_101540113300022187AqueousMVCRQSVEAIKGFLAIIFAVLSGSENFCGLERIRIKPNANGIQDQAGRMGFIAANQW
Ga0196899_102061813300022187AqueousMVCRQSVEAIKGFLAIIFAVLSGSENFCGLERIRIKPNANGMQDQAGRMGFIAANQW
Ga0196899_102111313300022187AqueousSVMVCRQSVEAIKGFLAIIFAVLSGSENFCGLERIRIKPNANEIQDRTGQIGFKATKSK
Ga0196899_102213473300022187AqueousRQSVEAIKGFLAIIFAVLSGSENFCGPERIRIKPNANGIQDQTGQIGFKATKSK
Ga0196905_1005804113300022198AqueousEAIKGFLAIIFAVLSGSENFCGPERIRIKPNANEIQDRTGQIGFKTANCNQNYNYVQIC
Ga0196905_101718013300022198AqueousIKGFLAIIFAVLSGSENFCGPERIRIKPNANEIQDRTGQIGFKATKSK
Ga0196901_108804613300022200AqueousQSVEAIKGFLAIIFAVLSGSENFCGPERIRIKPNANEIQDRTGQIGFKATKSK
Ga0208303_107872913300025543AqueousAIKGFLAIIFAVLSGSENFCGPERIRIKPNANGMQDQAGRMGFIAANQW
Ga0208149_106753723300025610AqueousAIKGFLAIIFAVLSGSENFCGHERIRIKPNANGIQDQTGQIGFKATKNK
Ga0208004_101914253300025630AqueousFLAIIFAVLSGSENFCGPERIRIKPNANGIQDQTGQIGFKAMKSK
Ga0208004_103144533300025630AqueousAIKGFLAIIFAVLSGSENFCGPERIRIKPNANEIQDRTGQIGFKATKSK
Ga0208428_107070723300025653AqueousSVMVCRQSVEAIKGFLAIIFAVLSGSENFCGHERIRIKPNANGIQDQTGQIGFKATKNK
Ga0208795_100770513300025655AqueousQSVEAIKGFLAIIFAVLSGSENFCGPERIRIKPNANEIQDRTGQIGFKTANCNQNYNYVQIC
Ga0208898_102407613300025671AqueousLAIIFAVLSGSENFCGPERIRIKPNANGIQDQTGQIGFKAMKSK
Ga0208162_103058313300025674AqueousAVLSGSENFCGPERIRIKPNANGIQDQTGQIGFKATKSK
Ga0208162_113760723300025674AqueousKKSSSVMVCRQSVEAIKGFLAIIFAVLSGSENFCGLERIRIKPNANGIQDQTGQIGFKATKSK
Ga0208150_103850713300025751AqueousSLVMVCRQSVEAIKGFLAIIFAVLSGSENFCGLERIRIKPNANGIQDQAGRMGFIAANQW
Ga0208899_102284913300025759AqueousLAIIFAVLSGSENFCGPERIRIKPNANEIQDRTGQIGFKAAKSK
Ga0208899_102798783300025759AqueousGFLAIIFAVLSGSENFCGPERIRIKPNANGIQDQTGQIGFKAMKSK
Ga0208899_104892513300025759AqueousSPGLLSPKKSSSVMVCRQSVEAIKGFLAIIFAVLSGSENFCGPERIRIKPNANGIQDRTGQIGFKATKSK
Ga0208899_105350213300025759AqueousAIKGFLAIIFAVLSGSENFCGHERIRIKPNANGMQDQVGRMGFIAANQW
Ga0208767_103412313300025769AqueousQSVEAIKGFLAIIFAVLSGSENFCGPERIRIKPNANGIQDRTSQIGFKATKSK
Ga0208767_103467913300025769AqueousCRQSVEAIKGFLAIIFAVLSGSENFCGHERIRIKPNANEIQDRTGQIGFKATKSK
Ga0208785_101256183300025815AqueousPKKSSLVMVCRQSVEAIKGFLAIIFAVLSGSENFCGLERIRIKPNANGIQDQAGRMGFIAANQW
Ga0208547_103577313300025828AqueousSVEAIKGFLAIIFAVLSGSENFCGPERIRIKPNANGIQDQTGQIGFKAMKSK
Ga0208917_104238913300025840AqueousRQSVEAIKGFLAIIFAVLSGSENFCGHERIRIKPNANGIQDQTGQIGFKATKNK
Ga0208645_103342613300025853AqueousSVEAIKGFLAIIFAVLSGSENFCGHERIRIKPNANEIQDRTSQIGFKAANCK
Ga0208645_117611913300025853AqueousGFLAIIFAVLSGSENFCGHERIRIKPNANGIQDRTGQIGFKATKSK
Ga0208644_102499073300025889AqueousEAIKGFLAIIFAVLSGSENFCGHERIRIKPNANEIQDRTGQIGLKAAKSK
Ga0208644_105016113300025889AqueousVEAIKGFLAIIFAVLSGSENFCGLERIRIKPNANGIQDQAGRMGFIAANQW
Ga0208644_125395823300025889AqueousCRQSVEAIKGFLAIIFAVLSGSENFCGHERIRIKPNANGIQDQTGQIGFKATKNK
Ga0208644_133817813300025889AqueousGFLAIIFAVLSGSENFCGPERIRIKPNANGMQDQAGRMGFIAANQW
Ga0208644_135273813300025889AqueousSVMVCRQSVEAIKGFLAIIFAVLSGSENFCGHERIRIKPNANEIQDRTSQIGFKAAKSK
Ga0348335_024474_2468_26413300034374AqueousMVCRQSVEAIKGFLAIIFAVLSGSENFCGPERIRIKPNANGIQDQTGQIGFKAMKSK
Ga0348335_086501_806_9793300034374AqueousMVCRQSVEAIKGFLAIIFAVLSGSENFCGLERIRIKPNANEIQDRTGQIGFKATKSK
Ga0348336_029319_64_2373300034375AqueousMVCRQSVEAIKGFLAIIFAVLSGSENFCGPERIRIKPNANGIQDQTGQIGFKATKSK
Ga0348336_080961_2_1243300034375AqueousFASMSGSENFCGPERIRIKPNANGIQDQTGQIGFKASKSK


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.