Metagenome / Metatranscriptome Family F063575

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F063575
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	56 residues
Representative Sequence	VRGLESTPRQLALPVEGPGRIERMWESFSPAAQERILRLLAAAIARILDQEKEQR
Number of Associated Samples	106
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	82.17 %
% of genes near scaffold ends (potentially truncated)	24.03 %
% of genes from short scaffolds (< 2000 bps)	82.95 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (86.047 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland (15.504 % of family members)
Environment Ontology (ENVO)	Unclassified (20.930 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (63.566 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 39.76% β-sheet: 0.00% Coil/Unstructured: 60.24%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF00239	Resolvase	35.66
PF13408	Zn_ribbon_recom	12.40
PF07508	Recombinase	10.08
PF01548	DEDD_Tnp_IS110	9.30
PF02371	Transposase_20	6.20
PF01061	ABC2_membrane	0.78
PF13692	Glyco_trans_1_4	0.78
PF02595	Gly_kinase	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	45.74
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	35.66
COG3547	Transposase	Mobilome: prophages, transposons [X]	15.50
COG1929	Glycerate kinase	Carbohydrate transport and metabolism [G]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	86.05 %
Unclassified	root	N/A	13.95 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	86.05 %
Unclassified	root	N/A	13.95 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	86.05 %
Unclassified	root	N/A	13.95 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	49.61 %
Unclassified	root	N/A	13.95 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.55 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	43.41 %
Unclassified	root	N/A	13.95 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	6.20 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1.55 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	37.98 %
Unclassified	root	N/A	13.95 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	6.20 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	1.55 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.78 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	20.93 %
Unclassified	root	N/A	13.95 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	6.20 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	3.88 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1.55 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	1.55 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.78 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.78 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	20.93 %
Unclassified	root	N/A	13.95 %
Alicyclobacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Alicyclobacillaceae	6.20 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.88 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1.55 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1.55 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	0.78 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.78 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
unclassified Nocardioidaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → unclassified Nocardioidaceae	20.93 %
Unclassified	root	N/A	13.95 %
Alicyclobacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Alicyclobacillaceae → Alicyclobacillus	6.20 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.88 %
unclassified Gemmatimonadaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae	1.55 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1.55 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	0.78 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.78 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Nocardioidaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → unclassified Nocardioidaceae → Nocardioidaceae bacterium	20.93 %
Unclassified	root	N/A	13.95 %
Alicyclobacillus tolerans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Alicyclobacillaceae → Alicyclobacillus → Alicyclobacillus tolerans	6.20 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.88 %
Mycobacterium kansasii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium kansasii	1.55 %
Gemmatimonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	1.55 %
unclassified Solirubrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter	0.78 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.78 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Nocardioidaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → unclassified Nocardioidaceae → Nocardioidaceae bacterium	20.93 %
Unclassified	root	N/A	13.95 %
Alicyclobacillus tolerans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Alicyclobacillaceae → Alicyclobacillus → Alicyclobacillus tolerans	6.20 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.88 %
Mycobacterium kansasii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium kansasii	1.55 %
Gemmatimonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	1.55 %
Solirubrobacter sp. URHD0082	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	0.78 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.78 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.78 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10164264	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300000880\|AL20A1W_1236312	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300000956\|JGI10216J12902_113067925	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300001333\|A21PFW6_1140573	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300002548\|JGI24974J35850_1001186	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Alicyclobacillaceae → Alicyclobacillus → Alicyclobacillus tolerans	2763	Open in IMG/M
3300002568\|C688J35102_118660078	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300002568\|C688J35102_119102738	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → unclassified Nocardioidaceae → Nocardioidaceae bacterium	638	Open in IMG/M
3300002568\|C688J35102_119447891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → unclassified Nocardioidaceae → Nocardioidaceae bacterium	697	Open in IMG/M
3300002568\|C688J35102_119608293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → unclassified Nocardioidaceae → Nocardioidaceae bacterium	730	Open in IMG/M
3300003369\|JGI24140J50213_10054369	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1410	Open in IMG/M
3300003861\|Ga0031654_10107002	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300004114\|Ga0062593_100491441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium kansasii	1134	Open in IMG/M
3300004153\|Ga0063455_100798280	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300004479\|Ga0062595_100419208	All Organisms → cellular organisms → Bacteria	968	Open in IMG/M
3300004480\|Ga0062592_100164297	All Organisms → cellular organisms → Bacteria	1509	Open in IMG/M
3300004480\|Ga0062592_100820213	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300005339\|Ga0070660_101617899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → unclassified Nocardioidaceae → Nocardioidaceae bacterium	551	Open in IMG/M
3300005435\|Ga0070714_102085614	Not Available	553	Open in IMG/M
3300005539\|Ga0068853_102098557	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300005764\|Ga0066903_104623893	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → unclassified Nocardioidaceae → Nocardioidaceae bacterium	733	Open in IMG/M
3300005944\|Ga0066788_10041408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium kansasii	1071	Open in IMG/M
3300005944\|Ga0066788_10088844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → unclassified Nocardioidaceae → Nocardioidaceae bacterium	758	Open in IMG/M
3300005950\|Ga0066787_10037157	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	900	Open in IMG/M
3300005994\|Ga0066789_10336812	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300005995\|Ga0066790_10074547	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	1460	Open in IMG/M
3300006046\|Ga0066652_102026285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → unclassified Nocardioidaceae → Nocardioidaceae bacterium	512	Open in IMG/M
3300006059\|Ga0075017_101135750	Not Available	611	Open in IMG/M
3300006102\|Ga0075015_101012378	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → unclassified Nocardioidaceae → Nocardioidaceae bacterium	509	Open in IMG/M
3300006755\|Ga0079222_10976277	Not Available	724	Open in IMG/M
3300009012\|Ga0066710_100389883	Not Available	2073	Open in IMG/M
3300009098\|Ga0105245_12377456	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300009137\|Ga0066709_100149004	All Organisms → cellular organisms → Bacteria	2987	Open in IMG/M
3300009137\|Ga0066709_101054433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1193	Open in IMG/M
3300009400\|Ga0116854_1013812	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3353	Open in IMG/M
3300009698\|Ga0116216_10050304	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Alicyclobacillaceae → Alicyclobacillus → Alicyclobacillus tolerans	2573	Open in IMG/M
3300009700\|Ga0116217_10795312	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300009789\|Ga0126307_10059033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Alicyclobacillaceae → Alicyclobacillus → Alicyclobacillus tolerans	3008	Open in IMG/M
3300009789\|Ga0126307_11029240	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300009840\|Ga0126313_10053453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Alicyclobacillaceae → Alicyclobacillus → Alicyclobacillus tolerans	2857	Open in IMG/M
3300010038\|Ga0126315_10692368	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300010039\|Ga0126309_10783198	Not Available	621	Open in IMG/M
3300010039\|Ga0126309_10852620	Not Available	599	Open in IMG/M
3300010044\|Ga0126310_10307507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1094	Open in IMG/M
3300010045\|Ga0126311_10107282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1928	Open in IMG/M
3300010166\|Ga0126306_10369082	All Organisms → cellular organisms → Bacteria	1118	Open in IMG/M
3300010379\|Ga0136449_101327748	All Organisms → cellular organisms → Bacteria	1118	Open in IMG/M
3300011107\|Ga0151490_1458053	Not Available	506	Open in IMG/M
3300012350\|Ga0137372_10328237	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1178	Open in IMG/M
3300012354\|Ga0137366_10309871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1160	Open in IMG/M
3300012355\|Ga0137369_10404492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	984	Open in IMG/M
3300012359\|Ga0137385_10332126	All Organisms → cellular organisms → Bacteria	1303	Open in IMG/M
3300012911\|Ga0157301_10038315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1174	Open in IMG/M
3300012915\|Ga0157302_10386308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → unclassified Nocardioidaceae → Nocardioidaceae bacterium	573	Open in IMG/M
3300015197\|Ga0167638_1013674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Alicyclobacillaceae → Alicyclobacillus → Alicyclobacillus tolerans	1922	Open in IMG/M
3300016319\|Ga0182033_10929508	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300016357\|Ga0182032_11391921	Not Available	607	Open in IMG/M
3300016371\|Ga0182034_10442865	All Organisms → cellular organisms → Bacteria	1074	Open in IMG/M
3300016387\|Ga0182040_10539793	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → unclassified Nocardioidaceae → Nocardioidaceae bacterium	937	Open in IMG/M
3300016387\|Ga0182040_11186469	All Organisms → cellular organisms → Bacteria → Proteobacteria	642	Open in IMG/M
3300016422\|Ga0182039_11626977	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → unclassified Nocardioidaceae → Nocardioidaceae bacterium	590	Open in IMG/M
3300016445\|Ga0182038_10522253	Not Available	1016	Open in IMG/M
3300017821\|Ga0187812_1271236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	540	Open in IMG/M
3300017939\|Ga0187775_10396592	Not Available	569	Open in IMG/M
3300017955\|Ga0187817_10253420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1121	Open in IMG/M
3300017959\|Ga0187779_10625061	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300017961\|Ga0187778_10121310	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	1636	Open in IMG/M
3300017961\|Ga0187778_11042767	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	568	Open in IMG/M
3300017966\|Ga0187776_10043783	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2529	Open in IMG/M
3300017966\|Ga0187776_10351081	All Organisms → cellular organisms → Bacteria	974	Open in IMG/M
3300017966\|Ga0187776_10404938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → unclassified Nocardioidaceae → Nocardioidaceae bacterium	913	Open in IMG/M
3300017966\|Ga0187776_10548217	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → unclassified Nocardioidaceae → Nocardioidaceae bacterium	798	Open in IMG/M
3300017966\|Ga0187776_10657061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → unclassified Nocardioidaceae → Nocardioidaceae bacterium	737	Open in IMG/M
3300017973\|Ga0187780_10236204	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1279	Open in IMG/M
3300017973\|Ga0187780_10385103	All Organisms → cellular organisms → Bacteria	993	Open in IMG/M
3300017974\|Ga0187777_10428313	All Organisms → cellular organisms → Bacteria	918	Open in IMG/M
3300017974\|Ga0187777_10468139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → unclassified Nocardioidaceae → Nocardioidaceae bacterium	878	Open in IMG/M
3300017999\|Ga0187767_10014957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → unclassified Nocardioidaceae → Nocardioidaceae bacterium	1593	Open in IMG/M
3300018058\|Ga0187766_10184118	All Organisms → cellular organisms → Bacteria	1312	Open in IMG/M
3300018058\|Ga0187766_11010447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → unclassified Nocardioidaceae → Nocardioidaceae bacterium	592	Open in IMG/M
3300018064\|Ga0187773_10186598	All Organisms → cellular organisms → Bacteria	1095	Open in IMG/M
3300018064\|Ga0187773_10538509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → unclassified Nocardioidaceae → Nocardioidaceae bacterium	703	Open in IMG/M
3300018072\|Ga0184635_10352118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → unclassified Nocardioidaceae → Nocardioidaceae bacterium	565	Open in IMG/M
3300018481\|Ga0190271_10798999	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1068	Open in IMG/M
3300019356\|Ga0173481_10239569	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300019361\|Ga0173482_10579785	Not Available	560	Open in IMG/M
3300020150\|Ga0187768_1003909	All Organisms → cellular organisms → Bacteria	2972	Open in IMG/M
3300020150\|Ga0187768_1071080	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300021358\|Ga0213873_10007266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2211	Open in IMG/M
3300021362\|Ga0213882_10009219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3539	Open in IMG/M
3300021362\|Ga0213882_10430664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → unclassified Nocardioidaceae → Nocardioidaceae bacterium	559	Open in IMG/M
3300022915\|Ga0247790_10140635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → unclassified Nocardioidaceae → Nocardioidaceae bacterium	617	Open in IMG/M
3300026142\|Ga0207698_11744952	Not Available	638	Open in IMG/M
3300027497\|Ga0208199_1008144	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2520	Open in IMG/M
3300027604\|Ga0208324_1003916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5400	Open in IMG/M
3300027905\|Ga0209415_10055389	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4995	Open in IMG/M
3300027907\|Ga0207428_10078937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Alicyclobacillaceae → Alicyclobacillus → Alicyclobacillus tolerans	2574	Open in IMG/M
3300028747\|Ga0302219_10006768	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	4373	Open in IMG/M
3300028801\|Ga0302226_10003180	All Organisms → cellular organisms → Bacteria	11291	Open in IMG/M
3300028803\|Ga0307281_10133312	All Organisms → cellular organisms → Bacteria	860	Open in IMG/M
3300030043\|Ga0302306_10341780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → unclassified Nocardioidaceae → Nocardioidaceae bacterium	573	Open in IMG/M
3300031543\|Ga0318516_10545647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → unclassified Nocardioidaceae → Nocardioidaceae bacterium	664	Open in IMG/M
3300031544\|Ga0318534_10188645	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1191	Open in IMG/M
3300031544\|Ga0318534_10369869	All Organisms → cellular organisms → Bacteria	824	Open in IMG/M
3300031544\|Ga0318534_10578605	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300031573\|Ga0310915_10896300	Not Available	622	Open in IMG/M
3300031670\|Ga0307374_10168767	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → unclassified Nocardioidaceae → Nocardioidaceae bacterium	1646	Open in IMG/M
3300031672\|Ga0307373_10116589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Alicyclobacillaceae → Alicyclobacillus → Alicyclobacillus tolerans	2228	Open in IMG/M
3300031719\|Ga0306917_11009327	Not Available	650	Open in IMG/M
3300031744\|Ga0306918_10980950	Not Available	657	Open in IMG/M
3300031751\|Ga0318494_10595981	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300031781\|Ga0318547_10485309	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → unclassified Nocardioidaceae → Nocardioidaceae bacterium	763	Open in IMG/M
3300031795\|Ga0318557_10163968	All Organisms → cellular organisms → Bacteria	1008	Open in IMG/M
3300031879\|Ga0306919_10738164	Not Available	758	Open in IMG/M
3300031890\|Ga0306925_10346019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1597	Open in IMG/M
3300031897\|Ga0318520_10342064	Not Available	907	Open in IMG/M
3300031938\|Ga0308175_100840532	All Organisms → cellular organisms → Bacteria	1007	Open in IMG/M
3300031942\|Ga0310916_11486107	Not Available	553	Open in IMG/M
3300032008\|Ga0318562_10625957	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300032041\|Ga0318549_10311957	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300032042\|Ga0318545_10252541	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300032160\|Ga0311301_11136961	All Organisms → cellular organisms → Bacteria	1010	Open in IMG/M
3300032770\|Ga0335085_10147935	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Alicyclobacillaceae → Alicyclobacillus → Alicyclobacillus tolerans	2952	Open in IMG/M
3300032782\|Ga0335082_10751667	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300032805\|Ga0335078_10104416	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4085	Open in IMG/M
3300032828\|Ga0335080_11868295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → unclassified Nocardioidaceae → Nocardioidaceae bacterium	585	Open in IMG/M
3300032892\|Ga0335081_10418958	All Organisms → cellular organisms → Bacteria	1715	Open in IMG/M
3300033181\|Ga0272431_10003641	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	22334	Open in IMG/M
3300033181\|Ga0272431_10013410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8613	Open in IMG/M
3300033289\|Ga0310914_10434051	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → unclassified Nocardioidaceae → Nocardioidaceae bacterium	1189	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.35%
Host-Associated	Host-Associated	4.65%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.92%
Aquatic	Environmental → Aquatic	5.43%
Plants	Host-Associated → Plants	4.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.50%
Freshwater	Environmental → Aquatic → Freshwater	3.10%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.10%
Sediment	Environmental → Aquatic → Sediment	2.33%
Peat	Environmental → Terrestrial → Peat	2.33%
Rock-Dwelling (Endoliths)	Environmental → Terrestrial → Rock-Dwelling (Endoliths)	1.55%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	1.55%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.55%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	54.26%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	23.26%
Loam	Environmental → Terrestrial → Soil → Loam	5.43%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.33%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.33%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.55%
Clay	Environmental → Terrestrial → Soil → Clay	1.55%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified	1.55%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	1.55%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.55%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.78%
Ice	Environmental → Aquatic → Freshwater → Ice	0.78%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.26%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	19.38%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	19.38%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.65%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.88%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.88%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.33%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.33%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.33%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.55%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	1.55%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified	1.55%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	1.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.55%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.78%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.78%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	15.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.53%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	6.98%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	6.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.43%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.10%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.88%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	3.88%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.88%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.33%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.33%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.55%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.55%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.55%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	1.55%
Rock	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified → Rock	1.55%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	1.55%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.55%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.78%
Polar Desert	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert	0.78%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.78%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.78%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.78%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.78%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300000880	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A35-65cm-20A)- 1 week illumina	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001333	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A21-PF)- 6 month illumina	Environmental	Open in IMG/M
3300002548	Polar desert microbial communities from Antarctic Dry Valleys - UQ255	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003369	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 002-22A	Environmental	Open in IMG/M
3300003861	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005944	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048	Environmental	Open in IMG/M
3300005950	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009400	Soil microbial community of the Robinson Ridge, Antarctica. Combined Assembly of Gp0139162, Gp0138857, Gp0138858	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011107	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300015197	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G6B, Proglacial plain, adjacent to northern proglacial tributary)	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300020150	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_20_MG	Environmental	Open in IMG/M
3300021358	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3	Host-Associated	Open in IMG/M
3300021362	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09	Environmental	Open in IMG/M
3300022915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S171-409R-4	Environmental	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027497	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG (SPAdes)	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028801	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_3	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300030043	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_1	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031670	Soil microbial communities from Risofladan, Vaasa, Finland - OX-3	Environmental	Open in IMG/M
3300031672	Soil microbial communities from Risofladan, Vaasa, Finland - OX-2	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033181	Rock endolithic microbial communities from Victoria Land, Antarctica - Linnaeus Terrace sud	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_101642642	3300000567	Peatlands Soil	VRGLQSTPRQLALPLEGRQSIDRMWESFSPAVQERILRLLAGAIARVLSKTEEQR*
AL20A1W_12363121	3300000880	Permafrost	LESSAPRQLALPIEGRDQIYGMWESFGPEAQERILRLLAPAVARILRQLEER*
JGI10216J12902_1130679252	3300000956	Soil	VRGLQPTGASRQLALPVAGSGPLDAVWESLSPEARERILRLLAAAIARILSDAEQRR*
A21PFW6_11405731	3300001333	Permafrost	VRGLESSAPRQLALPIEGRDQIYGMWESFGPEAQERILRLLAPAVARILRQLEER*
JGI24974J35850_10011862	3300002548	Polar Desert	VRGLESTPRQLALPVGGRDRTDRMWESFSPAAQEQVLRLLAGAIARILEQRERER*
C688J35102_1186600782	3300002568	Soil	VRGLQSSAARQLALPIVDGRDRRVDRMWESLSPAAQERILRLLARSIARVLSGEQR*
C688J35102_1191027381	3300002568	Soil	VRGLQPTGAPRQLALPVEGLSAIDRVWETLSPAAQERILRLLARAIVHVLTQREQQR*
C688J35102_1194478912	3300002568	Soil	VRGLQSTSRQLALPVEGRDPVEGMWESLGADAQERILRLLARAIARILSQQEQQ*
C688J35102_1196082932	3300002568	Soil	VRGLQLTGAARQLALPIVDGGDRVDRMWESFSPAAQERILRLLARAIARVLSQEEASR*
JGI24140J50213_100543692	3300003369	Arctic Peat Soil	VRGLDSTPRQLALPVEGPGRTDRMWESFSPAAQERILRLLARAIARILNPEEER*
Ga0031654_101070022	3300003861	Freshwater Lake Sediment	VRGLESTPCQLALPVEGRDRTDRMWESFSPAAQERVLRLLAGAIARILDQQEEER*
Ga0062593_1004914412	3300004114	Soil	VRGFESTPRQLALRLEGPDRIGGMWESFSPAAQERILRLLATVIARILSDGEQRR*
Ga0063455_1007982802	3300004153	Soil	PVRGLQSTSRQLALPVEGRDPVEGMWESLGADAQERILRLLARAIARILSQQEQQ*
Ga0062595_1004192082	3300004479	Soil	VRGFESTPRQLALRREGPDRIGGMWESFSPAAQERILRLLATVIARILSDAERRR*
Ga0062592_1001642971	3300004480	Soil	VRGLESTPRQLALPLEGPDRIGGMWESFSPAAQERILRLLARAIARILSQREEGR*
Ga0062592_1008202132	3300004480	Soil	VRGLQPTGASRQLALPVAGCPIEAVWESLGPEARERILRLLAAAIARILSDAEEVRG*
Ga0070660_1016178991	3300005339	Corn Rhizosphere	VRGLQSSAARQLALPIGDGRDRRVDRMWESFSPAAQERILRLLARSIARVLSGEEQR*
Ga0070714_1020856142	3300005435	Agricultural Soil	VRGLQSTPRQLALPVEGPSRIDRMWGSFSPAARERILRLLAAAIARILDQEKEQR*
Ga0068853_1020985572	3300005539	Corn Rhizosphere	VRGLQPTGAARQLALPIVDGRDRRVDRMWESFSPAAQERILRLLARSIAGVLSG
Ga0066903_1046238932	3300005764	Tropical Forest Soil	VRGLESTPRQLALPVEGPNRIDRMWGSFSPAAQERILRLLAAAIARILDQEKEQL*
Ga0066788_100414083	3300005944	Soil	VNPVRGLESTPRQLALPVEGPGQTDRMWESCSPAAQERILRLLARAIARILNPGEER*
Ga0066788_100888442	3300005944	Soil	VRGLESTPRQLALPVEGPGRTGRMWESFSPAAQERVLRLLAGAIARVLNQQEEER*
Ga0066787_100371573	3300005950	Soil	VRGLDSTPRQLALPVEGPGQTDRMWESFSPAAQERILRLLAG
Ga0066789_103368122	3300005994	Soil	VRGLESTPRQLALPVEGPGRTDRMWESFSPAAQERVLRLLAGAIARVLNQQKEER*
Ga0066790_100745473	3300005995	Soil	VRGLESTPRQLALPVEGPGRTDRMWESFSPAAQERVLRLLAG
Ga0066652_1020262852	3300006046	Soil	VRGLESSAARQLALPMEGRDRIGGMWESFSPAAQERILR
Ga0075017_1011357502	3300006059	Watersheds	VRGLESTPRQLALPVVEGRESIDRMWESLSPAAQERILRLLAAAIARILDQEKEEL*
Ga0075015_1010123782	3300006102	Watersheds	VRGLESTPRQLALPVEGRERIDRMWESFSPDAQERILRLLGRAIARILDQQEEQ*
Ga0079222_109762772	3300006755	Agricultural Soil	VRGLQSTPRQLALPVEGPSRIDRMWGSFSPAAQERILRLLAAAIARILDQEKEQ*
Ga0066710_1003898833	3300009012	Grasslands Soil	VRGLESSAPRQLALPLHGRERSDRIWESFSPEAQERILRLLARAIAHILSRQGEER
Ga0105245_123774562	3300009098	Miscanthus Rhizosphere	FVRGLQSSAARQLALPIGDGRDRRVDRMWESFSPAAQERILRLLARSIAGVLSGEEQR*
Ga0066709_1001490043	3300009137	Grasslands Soil	VRGLESSAPRQLALPLHGRERSDRIWESFSPEAQERILRLLARAIAHILSRQGEER*
Ga0066709_1010544332	3300009137	Grasslands Soil	VRGLQPSGASRQLALPVAGSGPLDAVWESLSPEARERILRLLAAAIARVLSDAGQRR*
Ga0116854_10138122	3300009400	Soil	VEVNPVRGLESTPRQLALPLEGRDRIGQMWESFSPAAQERVLRLLAGAIARVLSNDIEEQS*
Ga0116216_100503043	3300009698	Peatlands Soil	MEVNPVRGLESTPRQLALPLEGRDPIHGMWESFGAEAQERVLRLLAPAIARILSQLEDR*
Ga0116217_107953122	3300009700	Peatlands Soil	VRGLESTPRQLALPVEGIGRIDRMWESFSPEAQERVLRLLARAIARILNPEEER*
Ga0126307_100590333	3300009789	Serpentine Soil	VRGLESTPGQLALPLDGGDRIGGRWESFSPAVQERILRLLAVAIARVLSDELEEQKRR*
Ga0126307_110292402	3300009789	Serpentine Soil	VRGLQPTGAARQLALPIVDRRDTVDRMWESFSPAAQERILRLLARANARVLSQEASR*
Ga0126313_100534533	3300009840	Serpentine Soil	VRGLQPTGAARQLALPIVDRRDRVDRVWESFSPAAQERILRLLARAIARVVSQEEASR*
Ga0126315_106923682	3300010038	Serpentine Soil	VRGLESTPHQLALPLDGRDRIGGRWESFSPAAQERILRLLAVAIARVLSDVGEEQR*
Ga0126309_107831981	3300010039	Serpentine Soil	VRGLQSSAARQLALPIVEGAGGVDRMWESFSPAAQARILRV
Ga0126309_108526202	3300010039	Serpentine Soil	VRGFESTPHQLALPLDGRDRIGGRWESFSPAAQERILRLLAVAIARVLSDVGEEPR*
Ga0126310_103075071	3300010044	Serpentine Soil	VRGLQPTGAARQLALPIVDRRDRVDRMWESFSPAAQERILRLLARAI
Ga0126311_101072823	3300010045	Serpentine Soil	VRGLQPTGAARQLALPIVDRRDRVDRVGESFSPAAQERILRLLARAIARVVSQEEASR*
Ga0126306_103690822	3300010166	Serpentine Soil	VRGLQPTGAARQLALPIVDRRDTVDRMWESFSPAAQERILRLLARAIARVLSQEASR*
Ga0136449_1013277482	3300010379	Peatlands Soil	MEVNPVRGLESTPRQLALPVEGPSRIERMWETFSPAAQERILRLLAGAIARILNKEEQL*
Ga0151490_14580531	3300011107	Soil	QQLERRTFVRGLQPTRASRQLALPLEGQGRIDRMWESFSPAAQERILRLLARAIARILSQREEGR*
Ga0137372_103282371	3300012350	Vadose Zone Soil	LQSNAARQLALPIVDGRDAVDRMWESLPPVAQERILRLLARAIARVLSGEAQR*
Ga0137366_103098712	3300012354	Vadose Zone Soil	ERRTFVRGLQSNAARQLALPIVDRRDAVDRMWESLPPVAQERILRLLARAIARVLSGEAQR*
Ga0137369_104044923	3300012355	Vadose Zone Soil	VRGLQSNAARQLALPIVDGRGGVDRMWESLPPVAQERILRLLARAIARVLSGEAQP*
Ga0137385_103321262	3300012359	Vadose Zone Soil	VRGLQSNAARQLALPIIDGRDGVDRMWESLSPVAQERILRLLARAIARVLSGEPQR*
Ga0157301_100383152	3300012911	Soil	FVRGFESTPRQLALRLEGPDRIGGMWESFSPAAQERILRLLATVIARILSDGEQRR*
Ga0157302_103863082	3300012915	Soil	VRGLQPTRASRQLALPLEGPGSIDRVWESFSPAAQERILRLLARAIARIL
Ga0167638_10136742	3300015197	Glacier Forefield Soil	LESTPRQLALALEGRDRIDGMWESFSPAAQERILRLLAGAIARVLSDTEEEQ*
Ga0182033_109295082	3300016319	Soil	VRGLESTPRQLALPVEGPNRIDRMWGSFSPAAQERILRLLAAAIARILDEEKEQR
Ga0182032_113919212	3300016357	Soil	VRGLESTPRQLALPVEGPNRIDRLWGSFPPAAQERILRLLAPAIARILNQQQEEER
Ga0182034_104428652	3300016371	Soil	VRGLESTPRQLALPVVEGRESIDRMWESFSPAAQERILRLLAPAIARILNQQQEEER
Ga0182040_105397933	3300016387	Soil	VRGLESTAARQLALPLEGPNRIERMWESFSPQAQERILRLLAGAIARILNQQQEEER
Ga0182040_111864692	3300016387	Soil	VRGLESTPRQLALPVEGPNRIERMWESFSPAAQERILRLLAAAIARILDQEKEQR
Ga0182039_116269772	3300016422	Soil	VRGLESTPRQLALPVEGPNRIERMWESFSPAAQERILRLLAAAIARILEQEKRSGDEQQG
Ga0182038_105222532	3300016445	Soil	VRGLESTPRQLALPVEGPNRMDRMWGSFSPAAQERILRLLAAAIARILDQEKEQR
Ga0187812_12712361	3300017821	Freshwater Sediment	VRRLESTPRQLALPVVEGRESIDRMWDSFSPAAQEQILRLLAGVIARILDQEKEEL
Ga0187775_103965922	3300017939	Tropical Peatland	VRGLESTPRQLALPVEGPGRIERMWESFSPAAQERILRLLAAAIARVLDREKEEL
Ga0187817_102534202	3300017955	Freshwater Sediment	VRGLESTPRQLALPVVEGRESIDRMWESLSPAAQERILRLLAGVIARILDQEKEEL
Ga0187779_106250612	3300017959	Tropical Peatland	MEVNPVRELQSTPRQLALPVERPGRVERMWESFSPHAQERVLRVLASAIARIINGDQEDE
Ga0187778_101213102	3300017961	Tropical Peatland	VRGLQSTPRQLALPLERSRRIDRMWESFSPQAQERVLRVLASAIARIINGQRQETSDE
Ga0187778_110427673	3300017961	Tropical Peatland	EKRQQLMGVNPVRGLESTPRQLALPVEGRCRIERMWGSFSPAAQERILRLLAGAIARILDQEKEQR
Ga0187776_100437831	3300017966	Tropical Peatland	EVNPVRGLESTPRQLALPVERPGRIERMWESFSPAAQERILRLLAAAIARILNQQQEEER
Ga0187776_103510812	3300017966	Tropical Peatland	EVNPVRGFQSTPRQLALPVERPGRVERMWESFSPHAQERVLRVLASAIARIISGDQQEDE
Ga0187776_104049383	3300017966	Tropical Peatland	VRGLQSTPRQLALPVEGRASIDQMWESFSPAAQDLVLRLLASAITRILAGQQE
Ga0187776_105482172	3300017966	Tropical Peatland	MEVNPVRGLQSTPRQLALPVERPDRLERMWESFSPHAQERVVRVLASAIARIINGDQQEDER
Ga0187776_106570612	3300017966	Tropical Peatland	VRGLESTPRQLALPVEGPGQIERMWESFSPAAQERILRLLAAAIARILDQEMEQR
Ga0187780_102362042	3300017973	Tropical Peatland	VRGFQSTPRQLALPVERPGRVERMWDSFSPHAQERVLRVLASAIARIISGDQQEDKR
Ga0187780_103851032	3300017973	Tropical Peatland	QSTPRQLALPLEGPGQVERMWESFSPHAQERVLHVLASAIARIIHGDQQEDER
Ga0187777_104283132	3300017974	Tropical Peatland	VRGLESTPCQLALPVVEGRESIDRMWESFSPAAQEQILRLLAGAIARILEQEKEEL
Ga0187777_104681392	3300017974	Tropical Peatland	MEVNPVRGLQSTPRQLALPLERPRRIDLMWESFSPQAQERVLRVLASAIARIINGQRQETSDE
Ga0187767_100149572	3300017999	Tropical Peatland	MEVNPVRELQSTPRQLALPVERPGRVERMWDSFSPHAQERVLRVLASAIARIISGDQQEDER
Ga0187766_101841182	3300018058	Tropical Peatland	MEVNPVRGLQSTPRQLALPLERSRRIDRMWESFSPQAQERVLRVLASAIARIINGQRQETSDE
Ga0187766_110104471	3300018058	Tropical Peatland	MEVNPVRGLQSTPRQLALPLEGPGQVERMWESFSPHAQERVLRVLASAIARIIHGDQQEDER
Ga0187773_101865982	3300018064	Tropical Peatland	VRGLESTPRQLALPVEGPDRIDRMWGSFSPSAQERILRLLAAAIARILEQEKEQR
Ga0187773_105385092	3300018064	Tropical Peatland	MEVNPVRGFQSTPRQLALPVERPDRLERMWESFSPHAQERVLRVLASAIARIISGDQQEDER
Ga0184635_103521182	3300018072	Groundwater Sediment	VRGLQSSAAHQLALPIVDGADGVDRKWESFSPAAQERILRLLARAIARVLNQEEASR
Ga0190271_107989993	3300018481	Soil	VRGLQPTGASRQLALPVAGSGPIEAVWESLGPEARERILRLLAAAIARILSDAEEVRG
Ga0173481_102395692	3300019356	Soil	VRGLESTPRQLALPLEGPDRIGGMWESFSPAAQERILRLLAAAIARILNPREEER
Ga0173482_105797852	3300019361	Soil	TFVRGFESTPRQLALRLEGPDRIGGMWESFSPAAQERILRLLATVIARILSDGEQRR
Ga0187768_10039093	3300020150	Tropical Peatland	VRELQSTPRQLALPVERPGRVERMWESFSPHAQERVLRVLASAIARIINGDQEDER
Ga0187768_10710802	3300020150	Tropical Peatland	VRGFQSTPRQLALPVERPGRVERMWDSFSPHAQERVLRVLASAIARIISGDQQEDER
Ga0213873_100072663	3300021358	Rhizosphere	VRGLESTPRQLALPMEGPNRIERMWESFSPAAQERILRLLAAAIARILDQEKEQR
Ga0213882_100092193	3300021362	Exposed Rock	VRGLESTPRQLALPVEGPSRIDRMWESFSSAAQERILRLLAGAIARILDQEKDEL
Ga0213882_104306641	3300021362	Exposed Rock	VRGLESTPRQLALPVEGPNRIDRMWGSFSPAAQERILRLLAAAIARILDQEKEQR
Ga0247790_101406351	3300022915	Soil	VRGLQPTGAARQLALPIVDPRDGVDRMWESFSPATQERILRLLARAIARVLSQEKASR
Ga0207698_117449522	3300026142	Corn Rhizosphere	VRGLQPTGAARQLALPIVDGRDRRVDRMWESFSPAAQERILRLLARSIAGVLSGEEQR
Ga0208199_10081443	3300027497	Peatlands Soil	MEVNPVRGLQSTPRQLALPLEGRQSIDRMWESFSPAVQERILRLLAGAIARVLSKTEEQR
Ga0208324_10039166	3300027604	Peatlands Soil	VRGLQSTPRQLALPLEGRQSIDRMWESFSPAVQERILRLLAGAIARVLSKTEEQR
Ga0209415_100553893	3300027905	Peatlands Soil	VRGLESTPRQLALPLEGRDPIHGMWESFGAEAQERVLRLLAPAIARILSQLEDR
Ga0207428_100789373	3300027907	Populus Rhizosphere	VRGLEPSASRQLALPLEGRGRIDRMWESFSPEAQECILRLLARAIARILDGREEP
Ga0302219_100067683	3300028747	Palsa	VEVNPVRGLESTPRQLALPVEGLDRTDRMWESLSPAAQERILRLLARAIARILNPEEQR
Ga0302226_100031804	3300028801	Palsa	VRGLESTPRQLALPVEGLDRTDRMWESLSPAAQERILRLLARAIARILNPEEQR
Ga0307281_101333121	3300028803	Soil	VRGLQSTSRQLALPVEGRDRVDGMWESLGADAQERILRLLARAIARILSQQEQQ
Ga0302306_103417802	3300030043	Palsa	VEVNPVRGLESTPRQLALPVEGLDRTNRMWESLSPAAQERILRLLARAIARILNPEEQR
Ga0318516_105456473	3300031543	Soil	VRGLESTAARQLALPLEGPNRIERMWESFSPEAQERILRLLAGAIARVLAEQKEER
Ga0318534_101886452	3300031544	Soil	STAARQLALPLEGPNRIERMWESFSPEAQERILRLLAGAIARVLAEQKEER
Ga0318534_103698692	3300031544	Soil	LESTPRQLALPVEGPNRIERMWESFSPAAQERILRLLAPAIARILNQQQEEER
Ga0318534_105786052	3300031544	Soil	MEVNPVRGLQSTPRQLALPLEGRQSIDRMWESFSPAVQERILRLLAGAIARVLSRTEEER
Ga0310915_108963002	3300031573	Soil	VRGLESTPRQLALPVVGPNRIERMWESFSPAAQERILRLLAPAIARILNQQQEEER
Ga0307374_101687673	3300031670	Soil	VRGLESTPRQLALPLEGPGRMERMWESFSPAAQERILRLLARAIARIVTQCEEEEE
Ga0307373_101165892	3300031672	Soil	VRGLESTPRQLALPLEGRDPIHGMWESLSPAAQERILRLLARAIARILSQQEGQ
Ga0306917_110093271	3300031719	Soil	ESTPRQLALPVEGPNRIDRMWGSFSPAAQERILRLLAPAIARILNQQQEEER
Ga0306918_109809501	3300031744	Soil	VRGLESTPRQLALPVEGPNRIDRMWGSFSPAAQERILRLLAAAIARILDEEKEQG
Ga0318494_105959811	3300031751	Soil	VNPVRGLQSTPRQLALPLEGRQSIDRMWESFSPAVQERILRLLAGAIARVLSRTEEER
Ga0318547_104853092	3300031781	Soil	VRGLESTPRQLALPVEGPGRIERMWESFSPAAQERILRLLAAAIARILDQEKEQR
Ga0318557_101639682	3300031795	Soil	VRGLESTPRQLALPVEGPNRIERMWESFSPEAQERILRLLAGAIARVLAEQKEER
Ga0306919_107381642	3300031879	Soil	VRGLESTPRQLALPVEGPSRIERMWGSFSPAAQERILRLLAAAIARILDQEKEQR
Ga0306925_103460192	3300031890	Soil	VRGLESTPRQLALPVEGPNRIERMWESFSPAAQERILRLLAPAIARILNQQQEEER
Ga0318520_103420642	3300031897	Soil	VRGLESTPRQLALPVEGPNRIDRMWGSFSPAAQERILRLLAPAIARILNQQQEEER
Ga0308175_1008405322	3300031938	Soil	VRGFESTPRQLALRLEGPDRIGGMWESFSPAAQERILRLLATVIARILSDAEQRR
Ga0310916_114861072	3300031942	Soil	VRGLESTPRQLALPVEGPNRIDRMWGSFSPATRERILRLLAAAIARILEQEKRSSDEQQG
Ga0318562_106259572	3300032008	Soil	VRGLESTAARQLALPLEGPNRIERMWESFSPEAQERILRLLARAIARVLAEQKEER
Ga0318549_103119572	3300032041	Soil	VEVNPVRGLQSTPRQLALPLEGRQSIDRMWESFSPAVQERILRLLAGAIARVLSRTEEER
Ga0318545_102525412	3300032042	Soil	RGLESTAARQLALPLEGPNRIERMWESFSPEAQERILRLLAGAIARVLAEQKEER
Ga0311301_111369612	3300032160	Peatlands Soil	VRGLESTPRQLALPVEGPSRIERMWETFSPAAQERILRLLAGAIARILNKEEQL
Ga0335085_101479353	3300032770	Soil	EKRQQLVEVNPVRGLESTPRQLALPVEGPNRIDRMWGSFSPAAQERILRLLAAAIARILDQEKEQR
Ga0335082_107516673	3300032782	Soil	TPRQLALPVEGPSRIDRMWGSFSPAAQERILRLLAAAIARILEQEKEQR
Ga0335078_101044165	3300032805	Soil	VRGLESTRRQLALPVDGRGQVNRMWESFSPEAQEQILRLLARAIARILSPGEEQ
Ga0335080_118682951	3300032828	Soil	VRGLESTRRQLALPVMEGSGRIERMWESFSPAAQERILRLLA
Ga0335081_104189583	3300032892	Soil	VRGLESTRRQLALPVMEGSGRIERMWESFSPAAQERILRLLAAAIARILNQQQEEEL
Ga0272431_100036412	3300033181	Rock	VEVNPVRGLESTPCQLALPLEGRDRIDRMWESFSPAAQERILRLLAGAIARILSDTEEQR
Ga0272431_100134102	3300033181	Rock	VRGLESTPRQLALSLEGRDRIGGMWESFSPAAQERVLRLLAGAIARVLSNDIEEQS
Ga0310914_104340512	3300033289	Soil	VRGLESTPRQLALPVEGPNRMDRMWGSFSPAAQERILRLLAPAIARILNQQQEEER

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F063575

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences