NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F063574

Metagenome / Metatranscriptome Family F063574

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F063574
Family Type Metagenome / Metatranscriptome
Number of Sequences 129
Average Sequence Length 96 residues
Representative Sequence VSLHGNPIVETAHLPDGRNAHIRVGIAEDPYIADRDSNTVVLEVRIGHAVVAVIDTVLDAQQVDEARHLANRVREGLSSGSLEPTVHSLEPLADAVL
Number of Associated Samples 93
Number of Associated Scaffolds 129

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 27.13 %
% of genes near scaffold ends (potentially truncated) 25.58 %
% of genes from short scaffolds (< 2000 bps) 88.37 %
Associated GOLD sequencing projects 89
AlphaFold2 3D model prediction Yes
3D model pTM-score0.76

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (63.566 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(13.178 % of family members)
Environment Ontology (ENVO) Unclassified
(20.155 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(48.837 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128
1N57_07155050
2INPhiseqgaiiFebDRAFT_1050217533
3JGI10216J12902_1003579911
4JGI10216J12902_1090366941
5JGI10216J12902_1114121352
6Ga0062385_107284051
7Ga0063454_1000120453
8Ga0062593_1001413792
9Ga0062593_1035152961
10Ga0063455_1000681882
11Ga0062595_1000893303
12Ga0062595_1009571132
13Ga0062595_1021010282
14Ga0062595_1026625971
15Ga0062591_1003997542
16Ga0062594_1017488381
17Ga0062594_1030090461
18Ga0066671_104892992
19Ga0066388_1001130232
20Ga0066388_1026698172
21Ga0066388_1027070642
22Ga0066388_1056403841
23Ga0070714_1001464711
24Ga0070714_1012650182
25Ga0070711_1005756442
26Ga0066682_107281792
27Ga0070707_1016122111
28Ga0070741_100163952
29Ga0070741_100311836
30Ga0070741_116693912
31Ga0070734_102947322
32Ga0070735_108026322
33Ga0070696_1007252852
34Ga0070763_106059602
35Ga0066905_1004000272
36Ga0066903_1000428933
37Ga0066903_1001556161
38Ga0066903_1005036732
39Ga0066903_1006566762
40Ga0066903_1015154882
41Ga0066903_1016419431
42Ga0066903_1025128542
43Ga0066903_1032321822
44Ga0066903_1041683602
45Ga0066903_1071541252
46Ga0066651_103601562
47Ga0066656_104915771
48Ga0066656_110364142
49Ga0066652_1014373832
50Ga0079222_109776021
51Ga0079221_109531581
52Ga0075433_102312322
53Ga0075425_1011528321
54Ga0075425_1025547322
55Ga0075434_1025034332
56Ga0075434_1025087282
57Ga0075434_1025693152
58Ga0066709_1010610612
59Ga0114129_114259772
60Ga0075423_100564512
61Ga0126382_116399852
62Ga0126377_117371621
63Ga0126379_130165871
64Ga0134128_130272131
65Ga0136449_1023208392
66Ga0137364_110256382
67Ga0137376_109295082
68Ga0150985_1204127611
69Ga0164298_113241171
70Ga0164308_106224502
71Ga0157370_116584512
72Ga0181534_105604311
73Ga0181519_102914922
74Ga0132258_109598662
75Ga0132258_112508131
76Ga0132258_117923461
77Ga0132258_126751763
78Ga0132256_1025457271
79Ga0132257_1033463551
80Ga0182035_102882782
81Ga0187776_108090721
82Ga0187777_103669002
83Ga0066667_121528601
84Ga0206353_109842123
85Ga0210384_105893942
86Ga0207688_109486151
87Ga0207663_104646472
88Ga0207646_115900992
89Ga0207664_101200041
90Ga0209006_104848912
91Ga0265338_107980851
92Ga0311339_113877192
93Ga0073998_116902591
94Ga0302325_100780445
95Ga0302324_1015362572
96Ga0318534_107810701
97Ga0318573_103308271
98Ga0307374_101302044
99Ga0318574_106561921
100Ga0310686_1076264621
101Ga0318493_102469122
102Ga0318502_109543091
103Ga0318554_108549531
104Ga0318547_107730581
105Ga0318564_105258151
106Ga0318512_106935801
107Ga0318551_101051023
108Ga0308175_1019181321
109Ga0318505_105074502
110Ga0318510_100847892
111Ga0318510_102570162
112Ga0318514_106661721
113Ga0318525_103281311
114Ga0306920_1023468441
115Ga0306920_1025389042
116Ga0335085_102169492
117Ga0335085_112754172
118Ga0335082_108773941
119Ga0335079_100655002
120Ga0335078_103918731
121Ga0335081_104713232
122Ga0335081_118509601
123Ga0335069_117958682
124Ga0335071_103467093
125Ga0335071_111597712
126Ga0335071_112528062
127Ga0335072_106500351
128Ga0335077_104251123
129Ga0335077_121965332
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 25.60%    β-sheet: 29.60%    Coil/Unstructured: 44.80%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

102030405060708090VSLHGNPIVETAHLPDGRNAHIRVGIAEDPYIADRDSNTVVLEVRIGHAVVAVIDTVLDAQQVDEARHLANRVREGLSSGSLEPTVHSLEPLADAVLSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.76
Powered by PDBe Molstar

Structural matches with SCOPe domains



 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
63.6%36.4%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Bog Forest Soil
Bog
Soil
Vadose Zone Soil
Terrestrial Soil
Tropical Forest Soil
Surface Soil
Peatlands Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Soil
Agricultural Soil
Soil
Grasslands Soil
Grass Soil
Soil
Soil
Soil
Soil
Tropical Peatland
Soil
Tropical Forest Soil
Forest Soil
Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Agricultural Soil
Soil
Palsa
Arabidopsis Rhizosphere
Avena Fatua Rhizosphere
Corn, Switchgrass And Miscanthus Rhizosphere
Populus Rhizosphere
Corn Rhizosphere
Rhizosphere
Arabidopsis Rhizosphere
3.9%7.0%7.8%13.2%10.9%11.6%3.9%3.9%6.2%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
N57_071550502170459013Grass SoilLHGNPIHETAHLPDGRHAHIRVGIAEDSYIADRDLNTVVLEVRIGNGVVAALDTILDAEQVSEARHLANRVRDGLHEGSLEPTAHSLGPLTDELL
INPhiseqgaiiFebDRAFT_10502175333300000364SoilVSLHGNPIVETAQLPDGRNARIRVGVAEDPYIADRDLNTVVLEVRIGNDVAAVIDTVLDAAQVDAARHLATHVRDGLSSGELEPSVHSLERLADEVL*
JGI10216J12902_10035799113300000956SoilVSLHGNPIVETAHLPDGRNAHIRVGIAEDPYIADRDSNTVVLEVRIGHAVVAVIDTVLDAQQVDEARHLANRVREGLSSGSLEPTVHSLEPLADAVL
JGI10216J12902_10903669413300000956SoilVSLHGNPVVETAHLPDGRNARIRVGMAEDSYISDRDTNTVVLEVRIGQAVVAVLDTVLDARQVDEARHLANRVREGLSSGSLEPTVHSLEPLADAVL*
JGI10216J12902_11141213523300000956SoilVSLHGNPIVETAHLPDGRNARIRVGMAEDSYIADRDTNTVVLEVRVGQAVVAVVDTVLDGRQVDEARHLATLVREGLSSGSLEPTVHSLEPLANAVL*
Ga0062385_1072840513300004080Bog Forest SoilLHGNPIVESAHLPDGRQARIRVGVAEDPYIADRDLSTVVLEVRIGNGVVAVLDTILDPAQVEEAKHLADRVRDGLHSGELEPTAHSLGPLTDELL*
Ga0063454_10001204533300004081SoilMQPRPIRSSNPSSHPEPRPQSLCRVVYKAVVSLHGNPIVESAHLPDGRNAHIRVGMAEDPYIADRDTNTVVLEVRIGHAVVAVVDTVLDARQVDEARHLATRVREGLSSGSLEPTVHSLEPLADAVL*
Ga0062593_10014137923300004114SoilVSLHGNPIVETAHLPDGRNARIRVGLAEDPYIADRDMNTVVLEVRVGDAVLAVLDTVLDARQVDEARHLASRVREGLSSGSLEPTVHSLEPLADAVL*
Ga0062593_10351529613300004114SoilRNAHIRVGIAEDSYVADRELNTVVLEVRVGHGVAAVIDTVLDGDQVDAARHLAARVRDGLASGELEPNASSLERLADSVL*
Ga0063455_10006818823300004153SoilVYKAVVSLHGNPIVESAHLPDGRNAHIRVGMAEDPYIADRDTNTVVLEVRIGHAVVAVVDTVLDARQVDEARHLATRVQEGLSSGSLEPTVHSLEPLADAVL*
Ga0062595_10008933033300004479SoilMSLHGNPIVEHAHLPDGRNARIRIGIAEDSYVADRDLNTVTLDIRIGNNVAAVMDTVLDAEQVDEARHLAQRVREGLSSGELQPTTHSLEPFADEIL*
Ga0062595_10095711323300004479SoilVSLHGNPIIETARLPDGRQARIRVGVAEDSYIADRDSNTVVLEVRIGPGVAAVLDTVLDPDQVSEARHLAARVHEGLSSGTLQPTASSLEPLTDEFL*
Ga0062595_10210102823300004479SoilMSLHGNPIVETAHLPDGRNARIRVGIAEDSYVADRDLNTVVLEVRVGNGVAAVIDTVLDADQVDAARHLATRVRDGLSSGELEPTTHALERLADSVL*
Ga0062595_10266259713300004479SoilGSCKNARVSLHGNPIHETARLPDGGEVTIRVGIAEDSYIADKDLNTVVLEVRVGRSVVATLDTILGADQVDEARHLANRVREGLSSGELEPTAHSLGPLTDELL*
Ga0062591_10039975423300004643SoilVSLHGNPVIETTHLPDGRNAHIRVGIAEDSYVADRLLNTVVLEVRVGHGVAAVIDTVLDGDQVDAARHLAARVRDGLASGELEPNASSLERLADSVL*
Ga0062594_10174883813300005093SoilDRAVSLHGNPITDTARLPDGRVAEIRVGIAEDPYIADRDLDTVVLEVRVGHEVEAVIDTILGGSHVTEAEHLVTRVRDGLASGELQPTAASLEPLADSLL*
Ga0062594_10300904613300005093SoilVTLHANPIVETAHLPDGREAQIRVGIAEDSYVADSDLNTVVLEVRIGHGVVAVVDTILSADQVTEARHLATRVREGLSDGSLAPTAHALGPLTDELL*
Ga0066671_1048929923300005184SoilVSLHGNPIVENAHLPDGRNAQIHVGVAEDPYIADRDMNTVVLEVRIGRGVEAVIDTVLEPSQVTEARHLADRVREGLSSGELKPTTSSLERLADEIL*
Ga0066388_10011302323300005332Tropical Forest SoilVSLHGNPILETAHLPDGRNARIRVGIAEDPYVADRDLNTVVLEVRIGHAVAAVIDTVLDAQQEDEARHLANRVREGLSSGSLEPTVHSLEPLADAVL*
Ga0066388_10266981723300005332Tropical Forest SoilVSLHGNPIHESAHLPDGRNASIRVGIAEDPYIADRDSNTVVLEVRIGHAVVAVIDTVLDAQQVDEARHLANRVREGLSSGSLEPTVHSLEPLADAIL*
Ga0066388_10270706423300005332Tropical Forest SoilMTGTARLPDGREASIRVGIAEDSYVADRDLNTVVLEVRIGHAVAAVVDTILDASHVSEARHLLARVRDGLSSGELQPTVASLEPL
Ga0066388_10564038413300005332Tropical Forest SoilVSLHGNPIFESAHLPDGRNAHIRVGIAQDPYIADRDSNTVVLEVRIGHAVAAVIDTVLDASQVDEARHLANRVRDGLSSGALEPTVHSLEPLADAVL*
Ga0070714_10014647113300005435Agricultural SoilHGNPIVEHAHLPDGRNARIRIGIAEDSYVADRDLNTVTLDIRIGNNVAAVMDTVLDAEQVDEARHLAQRVREGLSSGELQPTTHSLEPFADEIL*
Ga0070714_10126501823300005435Agricultural SoilVSLHGHPIHETARLPHGGEVTIRVGIAEDPYIADKDLNTVVLEVRVGRSVLVALDTILDAEQVDQARHLAERVRDGLSSGELEPTAHSLGPLTDELL*
Ga0070711_10057564423300005439Corn, Switchgrass And Miscanthus RhizosphereVSLHGNPVHEKAHLPGGGEVTIRVGLAEDPYIADKDMNTVVLEVRIGRSVVAVLDTILDAEQVTEARHLAERVRDGLSAGELEPTAHSLGPLTDELL*
Ga0066682_1072817923300005450SoilVHLPDGRNASVRVGIAEDSYIPDRELNTVVLEVRVGHGVAAVIDTVLDAEQVDAARHLANRVRDGLASGELEPTVHALERLADSVL*
Ga0070707_10161221113300005468Corn, Switchgrass And Miscanthus RhizosphereVSLHGNPIIETADLPDGRQAHIRVGIAEDSYVADRELDTVVLEVRIEHDVVAVLDTILNGDQVTEAQHLATRVRDGLSDGSLAPTSHSLGPLTDEFL*
Ga0070741_1001639523300005529Surface SoilVTLHGNPVIESAHLPDGRNARIRVGIAEDSYVADRDLNTVVLEVRIGRSVAAVIDTVLNADQVDAARHLATRVRDGLASGELSPLASSLERLADEVL*
Ga0070741_1003118363300005529Surface SoilVSLHGNPVFESAHLPDGRNARIRVGIAEDPYVADKDSTTVVLEVRVGNGVAAVIDTVLAPDQVEAARHLAARVRDGLASGDLEPATSSLERLADEVL*
Ga0070741_1166939123300005529Surface SoilVTLHGNPVIESAHLPDGRNARIRVGIAEDSYVADRDLNTVVLEVRIGHSVAAVIDTVLNADQVDAARHLATRVRDGLASGELSPSASSLERLADEVL*
Ga0070734_1029473223300005533Surface SoilVSLHGNPINETARLPDGREVTVHVGILEDPYIADRDLNTVVLELRAGHGVLASVTTILDADQESEAKHLADRVVEGLHSGELEPHASALERLADEIL*
Ga0070735_1080263223300005534Surface SoilVSLHGNPVVEMARLPDGREARIRVGVAEDPYIADAELNTIVLEVRIGRGVVAVLDTILDAEQVSEARHLAGRVKEGLSSGELKPTASSLGPLTDELL*
Ga0070696_10072528523300005546Corn, Switchgrass And Miscanthus RhizosphereVSLHGNPILESAHLPDGRNARIRVGIAEDSYIADRDSNTVVLEVRVGHGVAAVIDTVLDADQVDAARHLANRVRDGLSSGELEPTVHALERLADSVL*
Ga0070763_1060596023300005610SoilVSLHGNPILETARLPDGREARIRVGVAEDPYIADRDMNTVVLELRLGRGVAAALDTILDPAQVSEARHLAERVREGLSSGA
Ga0066905_10040002723300005713Tropical Forest SoilVSLHGNPILETAHLPDGRNARIRVGIAEDPYIADRDLNTVVLEVRIGHAVAAVIDTVLDAQQEDEARHLANRVREGLSSGALEPTVHSLEPLADAVL*
Ga0066903_10004289333300005764Tropical Forest SoilMTGTARLPDGREASIRVGIAEDSYVADRDLNTVVLEVRIGHAVAAVIDTILDASHVSEARHLLTRVRDGLSSGELQPTVASLEPLADTLL*
Ga0066903_10015561613300005764Tropical Forest SoilVSLHGNPVHETARLPGGGEVTIRVGIAEDSYIADKDMNTVVLEVRVGRSVVATLDTILDADQVDEARHLAERVRDGLSSGELEPTA
Ga0066903_10050367323300005764Tropical Forest SoilVSLHGNPIFESAQLPDGRNAHIRVGIAEDPYIADRDSNTVVLEVRIGNAVAAVIDTVLDASQVDEARHLANRVREGLSSGALEPTVHSLEPLADAVL*
Ga0066903_10065667623300005764Tropical Forest SoilVSLHGNPIFESAHLPDGRNAHIRVGIAEDPYIADRDSNTVVLEVRIGNAVAAVVDTVLDASQVDEARHLANRVREGLSSGALEPTVHSLEPLADAVL*
Ga0066903_10151548823300005764Tropical Forest SoilVSLHGNPVHETAHLPNGGEVSIRVGIAEDPYIADKDLNTVVLEVRVGRSVVATLDTILDAQQVDEARHLAERVRDGLRTGELEPTAHSLGPLTDELL*
Ga0066903_10164194313300005764Tropical Forest SoilMSLHGNPIVESAHLPDGRNARIRVGVAQDSYIPDSESHTVVLEVHIGNAVTAVIDTILDPVQVDAARHLATRVRDGLSSGELEPTTSSLERLADAIL*
Ga0066903_10251285423300005764Tropical Forest SoilVTLHGNPIHETARLPDGREATIRVGIAEDPYIADKDLNTVVLEVKVGRGVLAVLDTILDADQVDQARHLARRVRDGLSTGELQPTAHSLGPLTDELL*
Ga0066903_10323218223300005764Tropical Forest SoilVTLHGNPIHETARLPDGREATIRVGIAEDPYIADKDLNTVVLEVRVGRGVLAVLDTILDADQVTEARHLAERVRDGLRSGELQPTAHSLGPLTDEVL*
Ga0066903_10416836023300005764Tropical Forest SoilVSLHGNPVHEKARLPNGGEVTIRVAIAEDSYIADKDMNTVVLEVRVGRSVVVTLDTILDAEQVDEARHLAERVRDGLSSGELEPTAHSLGPLTDELL*
Ga0066903_10715412523300005764Tropical Forest SoilVSLHGNPILETAHLPDGRNARIRVGIAEDPYIADRDSNTVVLEVRVGHAVVAVVDTVLDAAQVDEARHLANRVREGLSSGSLEPTVHSLEPLADAVL*
Ga0066651_1036015623300006031SoilVYKAVVSLHGNPIVESAHLPDGRNAHIRVGMAEDPYIADRDTNTVVLEVRIGQAVVAVVDTVLDGRQVDEARHLATRVREGLSSGSLEPTVHSLEPLADA
Ga0066656_1049157713300006034SoilVYKAVVSLHGNPIVESAHLPDGRNAHIRVGMAEDPYIADRDTNTVVLEVRIGHAVVAVVDTVLDARQVDEARHLATRVREGLSSGSLEPTVHSLEPLADAVL*
Ga0066656_1103641423300006034SoilMSLHGHPVLEQVHLPDGRNASVRVGIAEDSYIPDRELNTVVLEVRVGHGVAAVIDTVLDAAQVDAARHLARRVRDGLSSGELEPSTSALERLADSVL*
Ga0066652_10143738323300006046SoilACVSLHGNPIVENAHLPDGRNAQIHVGVAEDPYIADRDMNTVVLEVRIGRGVEAVIDTVLEPSQVTEARHLADRVREGLSSGELKPTTSSLERLADEIL*
Ga0079222_1097760213300006755Agricultural SoilVSLHGNPIVEDAHLPDGRNARIRVGIAEDPYIADRDSTTVVLEIRIGHSVAAVIDTILEPDQTTEANHLVTRVREGLSSGELEPNVHSLERLADSIL*
Ga0079221_1095315813300006804Agricultural SoilVSLHGNPIVEDAHLPDGRNARIRVGIAEDPYIADRDSTTVVLEIRIGHSVAAVIDTILEPDQTTEANHLVTRVREGLSSGELEPNVHSLERLADS
Ga0075433_1023123223300006852Populus RhizosphereMSLHGNPIVETAHLPDGRNARIRVAIAEDSYVADRDLNTVVLEVRVGHGVAAVIDTVLDADQVDAARHLATRVRDGLSSGELEPTTHALERLADSVL*
Ga0075425_10115283213300006854Populus RhizosphereMSLHGNPIFESAHLPDGRNARIRVGIAEDSYIPDSESSTVVLEVHIGNAVTAVIDTILDPAQVDAARHLATRVRDGLTSGELEPTTHSLERLADAIL*
Ga0075425_10255473223300006854Populus RhizosphereVTLHGNPIVESAHLPDGRNAHIRVGIAEDPYIADRDSNTVVLEVRIGHAVVAVLDTVLDAQQVDEARHLANRVREGLSSGSLEPTAHSLEPLADAVL*
Ga0075434_10250343323300006871Populus RhizosphereVSLHGNPIIETARLPDGRQARIRVGIAEDSYIADRDSNTVVLEVRIGPGVAAVLDTVLDPDQVSEARHLAARVHEGLSSGTLQPTASSLEPLTDEFL*
Ga0075434_10250872823300006871Populus RhizosphereMSLHGNPIVETAHLPDGRNARVRVGIAEDSYVADRDLNTVVLEVRVGHGVAAVIDTVLDADQVDAARHLATRVRDGLSSGELEPTTHALERLADSVL*
Ga0075434_10256931523300006871Populus RhizosphereVSLHGNPIIETAHLPDGRNAHIRVGIAEDSYVADRDLNTVVLEVRIGQAVAAVIDTVLDAKQEDEARHLANRVREGLSSGTLEPTVHSLEPLADAVL*
Ga0066709_10106106123300009137Grasslands SoilVSLHGNPVIETVHLPDGRNASIRVGIAEDSYVPDRELNTVVLEVRVGHGVAAVIDTVLDAAQVDAARHLASRVRDGLSSGELEPSTSALERLADSVL*
Ga0114129_1142597723300009147Populus RhizospherePDGRNARIRVAIAEDSYVADRDLNTVVLEVRVGHGVAAVIDTVLDADQVDAARHLATRVRDGLSSGELEPTTHALERLADSVL*
Ga0075423_1005645123300009162Populus RhizosphereMSLHGNPIVETAHLPDGRNARIRVGIAEDSYVADRDLNTVVLEVRVGHGVAAVIDTVLDADQVDAARHLATRVRDGLSSGELEPTTHALERLADSVL*
Ga0126382_1163998523300010047Tropical Forest SoilARIRVGIAQDSYIADRDSNTVVLEVRIGHAVVAVIDTVLDAAQVDEARHLANRVRDGLSSGSLEPTVHALEPLADAVL*
Ga0126377_1173716213300010362Tropical Forest SoilVSLHGNPILETAHLPDGRNARIRVGIAEDPYIADRDLNTVVLEVRIGHAVAAVIDTVLDAQQEDEARHLANRVREGLSSGSLEPTVHSLEPLADAVL*
Ga0126379_1301658713300010366Tropical Forest SoilVSLHGNPIFESAHLPDGRNAHIRVGIAEDPYIADRDSNTVVLEVRIGNAVAAVVDTVLDASQVDEARHLANRVREGLSSGSLEPTVHSLEPLADAVL*
Ga0134128_1302721313300010373Terrestrial SoilVSLHGNPIFEEAHLPDGRNTRIRVGVAEDPYIADRESTTVVLEVRIGHSVVAVIDTILDPDQTEAAHHLATRVKEGLSSGDLEPTVRSLERLADEIL*
Ga0136449_10232083923300010379Peatlands SoilVSLHGNPIVETARLPDGREARIRVGVAEDPYVSDSDMRTVVLELRLGRGVAAVLDTILDPSQVSEARHLAERVREGLTSGVLEPTAHSLEPLTDRIL*
Ga0137364_1102563823300012198Vadose Zone SoilVYKAVVSLHGNPIIETAHLPDGRNAHIRVGMAEDAYIADRDTNTVVLEVRIGQAVLAVVDTVLDARQVDEARHLATRVREGLSSGSLEPTVHALEPLADAVL*
Ga0137376_1092950823300012208Vadose Zone SoilMSLHGNPVVETAHLPDGRNAHIRVGIAEDSYIPDSELNTVVLEVRVGHGVAAVIDTVLDAAQVDAAQHLASRVRDGLASGELEPTTSALERLADSVL*
Ga0150985_12041276113300012212Avena Fatua RhizosphereGNPIVESAHLPDGRNAHIRVGMAEDPYIADRDTNTVVLEVRIGQAVVAVVDTVLDARQVDEARHLATRVREGLSSGSLEPTVHSLEPLADAVL*
Ga0164298_1132411713300012955SoilLHGNPINETAQLPDGRHAHIRVGIAEDSYIADRDLNTVVLEVRIGNGVVAALDTILGAEQVSEAQHLADRVRDGLHEGSLEPTAHSLGPLTDELL*
Ga0164308_1062245023300012985SoilSCKTPVVSLHGNPINETAQLPDGRHAHIRVGIAEDSYIADRDLNTVVLEVRIGNGVVAALDTILGAEQVSEAQHLADRVRDGLHEGSLEPTAHSLGPLTDELL*
Ga0157370_1165845123300013104Corn RhizosphereVTLHGNPVVETVQLPDGRNASIRVGVAEDSYVADRDLTTVTLDVRIGRSVVAVIDTILDPSQFTEARHLVARIREGLASGELEPATSSLERLADQIL*
Ga0181534_1056043113300014168BogVSLHGNPIVETARLPDGREARIRVGVAEDAYIADAEMNTVVLELRIGRGVAAVLDTILNPSQVSEARHLAERVRDGLVSGELEPTAHS
Ga0181519_1029149223300014658BogVSLHGNPIVETARLPDGREARIRVGVAEDAYIADAEMNTVVLELRIGRGVAAVLDTILNPSQVSEARHLAERVRDGLVSGELEPTAHSLGPLTDELL*
Ga0132258_1095986623300015371Arabidopsis RhizosphereVSLHGNPIIETAHLPDGRNAHIRVGIAEDSYVADRDLNTVVLEVRIGHAVAAVIDTVLDAEQEDEARHLANRVREGLSSGTLEPTVHSLEPLADAVL*
Ga0132258_1125081313300015371Arabidopsis RhizospherePLIDTTGLPDGREATIRVGIAEDSYVAERELNTVVLEVRVEHVVAAVIDTILGASHVSEARHLVARVRDGLSSGDLQPTAASLEPLADTLP*
Ga0132258_1179234613300015371Arabidopsis RhizosphereVSLHGNPVIETAHLPDGRQAHIRVGIAEDSYVADSDLNTVVLEVRIGHGVVAVVDTILRADQVTEARHLANRVRDGLSDGSLAPTSHALGPLADEYP*
Ga0132258_1267517633300015371Arabidopsis RhizosphereVSLHGNPIHETARLPDGGEVTIRVGIAEDSYIADKDLNTVVLEVRVGRSVVATLDTILGAEQVEEARHLANRVREGLSSGELEPTAHSLGPLTDELL*
Ga0132256_10254572713300015372Arabidopsis RhizosphereVSLHGNPIHEKARLPDGGEVTIRVGIAEDSYIADKDLNTVVLEVRVGRSVVATLDTILGAEQVDEARHLANRVREGLSSGELEPTALSLGPLTDELL*
Ga0132257_10334635513300015373Arabidopsis RhizosphereVRLHGNPVIETAHLPDGRQAHIRVGIAEDSYVADSDLNTVVLEVRIGHGVVAVVDTILRADQVTEARHLANRVRDGLSDGSLAPTSHALGPLADEYL*
Ga0182035_1028827823300016341SoilVSLHGNPVHEKARLPNGGEVAIRVGIAEDPYIADKDLNTVVLEVRVGRSVVATLDTILDAEQVDEARHLAERVREGLSSGELEPTAHSLGP
Ga0187776_1080907213300017966Tropical PeatlandMSLHGNPILESGHLPDGRPFRIRVGVAEDPYIADSELSTVVLEVKVGGHVAAVMDTILSPDQESQALHLAERVRDGLAAGELEPTVHSLGPLTDEFL
Ga0187777_1036690023300017974Tropical PeatlandVSLHGNPILETAHLPDGRQARIRVGVAEDPYIADRDLSTVVLEVRIGGGVVAVLDTILDPAQVSEARHLAERVRQGLSTGELPPTAHALGPLTDELL
Ga0066667_1215286013300018433Grasslands SoilMSLHGNPVVETAHLPDGRNAHIRVGIAEDSYIPDSELNTVVLEVRVGHGVAAVIDTVLDAAQVDAARHLASRVRDGLSSGELEPSTSALERLADSVL
Ga0206353_1098421233300020082Corn, Switchgrass And Miscanthus RhizosphereMSLHGNPVVEQAQLPDGREATIRVGIFEDPYVADKLLNTVTLEVSVGGELVAGMDTVLDAGQVDEARRLAARVREGLAGGELEPTVHSLEPLADSIL
Ga0210384_1058939423300021432SoilVSLHGNPIVETARLPDGREARIRVGVAEDSYIADRDMHTVVLEVRIGRGVVAVHDTILDPGQVEEARHLAARVHEGLSSGELKPTASSLGPLTDELL
Ga0207688_1094861513300025901Corn, Switchgrass And Miscanthus RhizosphereVSLHGNPITDTARLPDGRVAEIRVGIAEDPYIADRDLDTVVLEVRVGHEVEAVIDTILGGSHVTEAEHLVTRVRDGLASGELQPTAASLEPLADSLL
Ga0207663_1046464723300025916Corn, Switchgrass And Miscanthus RhizosphereVSLHGNPVHEKAHLPGGGEVTIRVGLAEDPYIADKDMNTVVLEVRIGRSVVAVLDTILDAEQVTEARHLAERVRDGLSAGELEPTAHSLGPLTDELL
Ga0207646_1159009923300025922Corn, Switchgrass And Miscanthus RhizosphereVSLHGNPIIETADLPDGRQAHIRVGIAEDSYVADRELDTVVLEVRIEHDVVAVLDTILNGDQVTEAQHLATRVRDGLSDGSLAPTSHSLGPLTDEFL
Ga0207664_1012000413300025929Agricultural SoilNAMSLHGNPIVEHAHLPDGRNARIRIGIAEDSYVADRDLNTVTLDIRIGNNVAAVMDTVLDAEQVDEARHLAQRVREGLSSGELQPTTHSLEPFADEIL
Ga0209006_1048489123300027908Forest SoilVSLHGNPILETARLPDGREARIRVGVAEDPYIADRDMNTVVLELRLGRGVAAVLDTILDPAQVSEARHLAERVREGLISGDLQPTAHSLGPLTDEIL
Ga0265338_1079808513300028800RhizosphereGCRRRKLSRSCRTQPMSLHGNPIVESAHLPDGRQARIRVGIAEDSYIADSELNTVVLEVRIGNGVAAVLDTILDAEQVSEARHLANRVREGLSDGSLEPTAHSLGPLTDELL
Ga0311339_1138771923300029999PalsaMSLHGNPIVETARLPDGREAKIRVGVAEDPYIADRDMTTVVLEVRLGRGVAAVLDTILDPAQVSEARHLAERVREGLISGALEPTAHSLGPLTDEIL
Ga0073998_1169025913300031023SoilILETARLPDGREARIRVGVAEDPYIADRDMNTVVLEVRLGRGVAAVLDTILGAAQVSEARHLAERVREGLASGALEPTAHSLGPLTDELL
Ga0302325_1007804453300031234PalsaMSLHGNPIVETARLPDGREARIRVGVAEDPYIADRDMNTVVLELRIGRGVAAVLDTILDPAQVSEARHLAERVREGLRSGALQPTAHSLGPLTDELL
Ga0302324_10153625723300031236PalsaKEVMSLHGNPIVETARLPDGREARIRVGVAEDPYIADRDMNTVVLELRIGRGVAAVLDTILDPAQVSEARHLAERVREGLRSGALQPTAHSLGPLTDELL
Ga0318534_1078107013300031544SoilVSLHGNPVHAKARLPNGGEVAIRVGIAEDSYIADKDMNTVVLEVRVGRSVVATLDTILDAEQVDEARHLAERVREGLSSGELEPTAHSLGPLTDELL
Ga0318573_1033082713300031564SoilVSLHGNPVHEKAHLPNGGEVSIRVGIAEDPYIADKDLNTVVLEVRVGRSVVATLDTILDADQVDEARQLAERVRDGLGSGELEPTAHSLGPLTDELL
Ga0307374_1013020443300031670SoilPPSFAASWPRPRPLCVVYKGRVSLHGNPILETARLPDGREARIRVGMAEDPYIADRDMNTVVLEIKLGRGVAAVLNTILDPLQVTEARHLAARVREGLNSGELTPTASSLEPLTDEIL
Ga0318574_1065619213300031680SoilVSLHGNPVHEKAHLPNGGEVSIRVGIAEDPYIADKDLNTVVLEVRVGRSVVATLDTILDADQVDEARHLAERVRDGLGSGELEPTAHSLGPLTDELL
Ga0310686_10762646213300031708SoilMSLHGNPIVELARLPDGREAKIRVGLAEDPYIAERDENTVVLEVRIGSGVVAVLDTILGADQVEQAQHLVKRVREGLSSGELKPTASALGPLTDEFL
Ga0318493_1024691223300031723SoilVSLHGNPIVETAHLPDGRHARIRVGVAEDPYIADRDLSTVVLEVRIGNGVVAVLDTILDPAQVAEARHLADRVREGLGSGELEPTAHSLGPLTDELL
Ga0318502_1095430913300031747SoilVSLHGNPVHEKAHLPNGGEVSIRVGIAEDPYIADKDLNTVVLEVRVGRSVVATLDTILDADQVDEARHLAERVRDGLGTGELEPTAHSLGPLTDELL
Ga0318554_1085495313300031765SoilPNGGEVSIRVGIAEDPYIADKDLNTVVLEVRVGRSVVATLDTILDADQVDEARHLAERVRDGLGSGELEPTAHSLGPLTDELL
Ga0318547_1077305813300031781SoilVSLHGNPVHEKARLPNGGEVAIRVGIAEDPYIADKDLNTVVLEVRVGRSVVATLDTILDADQVDEARHLAERVRDGLGSGELEPTAHSLGPLTDELL
Ga0318564_1052581513300031831SoilVSLHGNPVHETARLPNGGEVAIRVGLAEDSYIADKDMNTVVLEVRVGRSVVATLDTILDADQVDEARHLAERVRDGLGTGELEPTAHSLGPLTDELL
Ga0318512_1069358013300031846SoilHLPDGRHARIRVGVAEDPYIADRDLSTVVLEVRIGNGVVAVLDTILDPAQVAEARHLADRVREGLGSGELEPTAHSLGPLTDELL
Ga0318551_1010510233300031896SoilVSLHGNPIVETAHLPDGRHARIRVGVAEDSYIADRDLNTVVLEVRIGSGVVAVLDTILDAAQVAEARHLADRVREGLASGALEPTAHSLGPLTDELL
Ga0308175_10191813213300031938SoilNPVVETVQLPDGRNASIRVGVAEDSYVADRDLTTVTLDVRIGRSVVAVIDTILDPSQFTEARHLVARIREGLASGELEPATSSLERLADQIL
Ga0318505_1050745023300032060SoilVSLHGNPVHAKARLPNGGEVAIRVGIAEDSYIADKDMNTVVLEVRVGRSVVATLDTILDAEQVDEARHLAERVRDGLSSGELEPTAHSLGPLTDELL
Ga0318510_1008478923300032064SoilVETAHLPDGRHARIRVGVAEDSYIADRDLNTVVLEVRIGSGVVAVLDTILDAAQVAEARHLADRVREGLASGALEPTAHSLGPLTDELL
Ga0318510_1025701623300032064SoilVSLHGNPVHEKARLPNGGEVAIRVGIAEDPYIADKDLNTVVLEVRVGRSVVATLDTILDADQVDEARHLAERVREGLSSGELEPTAHSLG
Ga0318514_1066617213300032066SoilVSLHGNPVHETARLPNGGEVAIRVGLAEDSYIADKDMNTVVLEVRVGRSVLATLDTILDAEQVDEAHHLATRVRDGLSSGELEPTAHSLGPLTDELL
Ga0318525_1032813113300032089SoilVHETAHLPNGGEVSIRVGIAEDPYIADKDLNTVVLEVRVGRSVVATLDTILDADQVDEARHLAERVRDGLGSGELEPTAHSLGPLTDELL
Ga0306920_10234684413300032261SoilVHETARLPNGGEVKIRVGIAEDSYIADKDLNTVVLEVRVGRSVVATLDTILDAEQVDEARHLAERVREGLSSGELEPTAHSLGPLTDELL
Ga0306920_10253890423300032261SoilVSLHGNPVHAKARLPNGGEVAIRVGIAEDSYIADKDMNTVVLEVRVGRSVVATLDTILDAEQVDEARHLAERVREGLSSGELEPTAHSLGPL
Ga0335085_1021694923300032770SoilMSLHGSPIIEHVRLPDGRQARIRVGVAEDSYIADSEMSTVVLEVRIGSGVAAVLDTILDPEQEKAAQHLADRVRDGLSSGELEPTAHSLGPLTDEIL
Ga0335085_1127541723300032770SoilMSLHGSPIIEEAHLPDGRQAQIRVGIAQDSYIDERDMDTVVLEVRIGRGVVAVMDTILGSAQVSEARHLANRVREGLTCGTLEPSAASLGPLTDQLL
Ga0335082_1087739413300032782SoilVSLHGNPIHETARLPDGREVSIRVGIAEDSYIADRDLNTVVLEVRAGRGVLAVLDTILGAEQVDEARHLAERVREGLGSGELEPTAHSLGPLTDELL
Ga0335079_1006550023300032783SoilMSLHGSPIIEHVRLPDGRQARIRVGVAEDSYIADSEMSTVVLEVRIGGGVAAVLDTILDPEQEKAAQHLADRVRDGLSSGELEPTAHSLGPLTDEIL
Ga0335078_1039187313300032805SoilGRETVIRVGIPEDSYIADRDLNTVVLELRSGRAVLAVVTTILNADQESAARRLADRVAEGLRSGELEPHASALGPLADEIL
Ga0335081_1047132323300032892SoilVSNNDVVSLHAHPIHETVRLPDGRETVIRVGIPEDSYIADRDLNTVVLELRSGRAVLAVVTTILNADQESEARRLADRVAEGLRSGELEPHASALEPLADEIL
Ga0335081_1185096013300032892SoilGSPIIEEAHLPDGRQAQIRVGIAQDSYIDERDMDTVVLEVRIGRGVVAVMDTVLGSAQVSEARHLANRVREGLTCGTLEPSAASLGPLTDQLL
Ga0335069_1179586823300032893SoilMSLHGSPIIEEAHLPDGRQAQIRVGIAQDSYIDERDMDAVVLEVRSGRGVVAVMDTILGSAQVSEARHLANRVREGLTCSTLEPSAASLGPLTDQLL
Ga0335071_1034670933300032897SoilMSLHGSPVVETAKLPDGRHAHIRVGVAEDSYIPESELRTVVLEVRVGGGVAAVLDTILDPEQVSEARHLAERVRDGLASGELAPTAHALGPLTDEFL
Ga0335071_1115977123300032897SoilVSLHGNPIHETARLPDGREVSIRVGIAEDSYIADRDLNTVVLEVRAGRGVLAVLDTILGAEQVDEARHLADRVREGLGSGELEPTAHSLGPLTDELL
Ga0335071_1125280623300032897SoilMSLHGSPIIEEAHLPDGRQAQIRVGIAQDSYIDERDMDTVVLEVRIGRGVVAVMDTILGSAQVSEARHLANRVREGLTGGTLEPSAASLGPLTDQLL
Ga0335072_1065003513300032898SoilVSLHGNPIVETARLPDGREARIRVGIAEDPYIADRDLSTVVLELRIGHGVVAVLDTILDPDQVDEARHLVRRVHEGLSSGELQPTAHSLGPLTDEFL
Ga0335077_1042511233300033158SoilVSNNDVVSLHAHPIHETVRLPDGRETVIRVGIPEDSYIADRDLNTVVLELRSGRAVLAVVTTILNADQESAARRLADRVAEGLRSGELEPHASALGPLADEIL
Ga0335077_1219653323300033158SoilLHGSPIIEHVRLPDGRQARIRVGVAEDSYIADSEMSTVVLEVRIGSGIAAVLDTILDPEQEKAARHLADRVRDGLSSGELEPTAHSLGPLTDEIL


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.