NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F063558

Metagenome / Metatranscriptome Family F063558

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F063558
Family Type Metagenome / Metatranscriptome
Number of Sequences 129
Average Sequence Length 60 residues
Representative Sequence EYLAAVRLFQESAVEVLKMFEDGRDDHMLAAYPKSQEGSNKIREVGGKFWPNEFPPN
Number of Associated Samples 117
Number of Associated Scaffolds 129

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 1.55 %
% of genes near scaffold ends (potentially truncated) 96.90 %
% of genes from short scaffolds (< 2000 bps) 92.25 %
Associated GOLD sequencing projects 115
AlphaFold2 3D model prediction Yes
3D model pTM-score0.75

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (99.225 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(13.178 % of family members)
Environment Ontology (ENVO) Unclassified
(20.930 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(37.209 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 52.94%    β-sheet: 0.00%    Coil/Unstructured: 47.06%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.75
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
f.13.1.0: automated matchesd6eida_6eid0.79028
a.24.2.0: automated matchesd4z9ha_4z9h0.76682
a.138.1.3: Di-heme elbow motifd1oaha_1oah0.75825
a.7.2.1: Enzyme IIa from lactose specific PTS, IIa-lacd1e2aa_1e2a0.75812
a.29.13.1: Bacillus cereus metalloprotein-liked3d19a13d190.75694

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 129 Family Scaffolds
PF00753Lactamase_B 40.31
PF03824NicO 0.78
PF06496DUF1097 0.78
PF00296Bac_luciferase 0.78

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 129 Family Scaffolds
COG2141Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)Coenzyme transport and metabolism [H] 0.78

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms99.22 %
UnclassifiedrootN/A0.78 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000956|JGI10216J12902_119370565All Organisms → cellular organisms → Bacteria624Open in IMG/M
3300002562|JGI25382J37095_10200390All Organisms → cellular organisms → Bacteria604Open in IMG/M
3300003267|soilL1_10136764All Organisms → cellular organisms → Bacteria1343Open in IMG/M
3300004267|Ga0066396_10034111All Organisms → cellular organisms → Bacteria755Open in IMG/M
3300004479|Ga0062595_101625165All Organisms → cellular organisms → Bacteria604Open in IMG/M
3300005178|Ga0066688_10313386All Organisms → cellular organisms → Bacteria1013Open in IMG/M
3300005295|Ga0065707_10221348All Organisms → cellular organisms → Bacteria1224Open in IMG/M
3300005328|Ga0070676_11388829All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria538Open in IMG/M
3300005332|Ga0066388_106510554All Organisms → cellular organisms → Bacteria589Open in IMG/M
3300005334|Ga0068869_100687266All Organisms → cellular organisms → Bacteria872Open in IMG/M
3300005353|Ga0070669_100519456All Organisms → cellular organisms → Bacteria990Open in IMG/M
3300005363|Ga0008090_13941498All Organisms → cellular organisms → Bacteria500Open in IMG/M
3300005450|Ga0066682_10597261All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium693Open in IMG/M
3300005454|Ga0066687_10837166All Organisms → cellular organisms → Bacteria548Open in IMG/M
3300005467|Ga0070706_100027983All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium5185Open in IMG/M
3300005547|Ga0070693_101292636All Organisms → cellular organisms → Bacteria563Open in IMG/M
3300005554|Ga0066661_10746869All Organisms → cellular organisms → Bacteria573Open in IMG/M
3300005558|Ga0066698_10300164All Organisms → cellular organisms → Bacteria1112Open in IMG/M
3300005719|Ga0068861_101300839All Organisms → cellular organisms → Bacteria707Open in IMG/M
3300005764|Ga0066903_100283797All Organisms → cellular organisms → Bacteria2599Open in IMG/M
3300005764|Ga0066903_105134102All Organisms → cellular organisms → Bacteria693Open in IMG/M
3300005764|Ga0066903_108788119All Organisms → cellular organisms → Bacteria513Open in IMG/M
3300006791|Ga0066653_10104918All Organisms → cellular organisms → Bacteria1297Open in IMG/M
3300006791|Ga0066653_10461080All Organisms → cellular organisms → Bacteria647Open in IMG/M
3300006806|Ga0079220_11710316All Organisms → cellular organisms → Bacteria550Open in IMG/M
3300006871|Ga0075434_102219860All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria553Open in IMG/M
3300006893|Ga0073928_10637622All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ARR65749Open in IMG/M
3300006904|Ga0075424_100059889All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3981Open in IMG/M
3300006914|Ga0075436_100809046All Organisms → cellular organisms → Bacteria698Open in IMG/M
3300007255|Ga0099791_10189334All Organisms → cellular organisms → Bacteria968Open in IMG/M
3300007255|Ga0099791_10396710All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria664Open in IMG/M
3300007255|Ga0099791_10401458All Organisms → cellular organisms → Bacteria660Open in IMG/M
3300007255|Ga0099791_10443963All Organisms → cellular organisms → Bacteria627Open in IMG/M
3300009038|Ga0099829_10025402All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales4146Open in IMG/M
3300009100|Ga0075418_10232295All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1963Open in IMG/M
3300009147|Ga0114129_11847532All Organisms → cellular organisms → Bacteria734Open in IMG/M
3300009147|Ga0114129_12575360All Organisms → cellular organisms → Bacteria607Open in IMG/M
3300009156|Ga0111538_13021835All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria587Open in IMG/M
3300009162|Ga0075423_12649451All Organisms → cellular organisms → Bacteria548Open in IMG/M
3300009810|Ga0105088_1046657All Organisms → cellular organisms → Bacteria726Open in IMG/M
3300010043|Ga0126380_11239891All Organisms → cellular organisms → Bacteria645Open in IMG/M
3300010046|Ga0126384_10191348All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella aerolata1612Open in IMG/M
3300010048|Ga0126373_10796477All Organisms → cellular organisms → Bacteria1007Open in IMG/M
3300010119|Ga0127452_1024764All Organisms → cellular organisms → Bacteria1166Open in IMG/M
3300010147|Ga0126319_1354966All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria554Open in IMG/M
3300010303|Ga0134082_10493255All Organisms → cellular organisms → Bacteria533Open in IMG/M
3300010360|Ga0126372_12481077All Organisms → cellular organisms → Bacteria569Open in IMG/M
3300010366|Ga0126379_12692581All Organisms → cellular organisms → Bacteria594Open in IMG/M
3300010376|Ga0126381_100917192All Organisms → cellular organisms → Bacteria1262Open in IMG/M
3300010398|Ga0126383_13366828All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria522Open in IMG/M
3300010400|Ga0134122_13379172All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria502Open in IMG/M
3300010403|Ga0134123_10040377All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3457Open in IMG/M
3300010862|Ga0126348_1044137All Organisms → cellular organisms → Bacteria1332Open in IMG/M
3300011120|Ga0150983_15681621All Organisms → cellular organisms → Bacteria689Open in IMG/M
3300011269|Ga0137392_11640869All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria501Open in IMG/M
3300011270|Ga0137391_10390908All Organisms → cellular organisms → Bacteria1190Open in IMG/M
3300012038|Ga0137431_1129842All Organisms → cellular organisms → Bacteria715Open in IMG/M
3300012204|Ga0137374_10250859All Organisms → cellular organisms → Bacteria1484Open in IMG/M
3300012205|Ga0137362_11678093All Organisms → cellular organisms → Bacteria522Open in IMG/M
3300012206|Ga0137380_11070078All Organisms → cellular organisms → Bacteria688Open in IMG/M
3300012207|Ga0137381_10355609All Organisms → cellular organisms → Bacteria1277Open in IMG/M
3300012208|Ga0137376_11506831All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria564Open in IMG/M
3300012211|Ga0137377_11299212All Organisms → cellular organisms → Bacteria658Open in IMG/M
3300012212|Ga0150985_103934903All Organisms → cellular organisms → Bacteria664Open in IMG/M
3300012401|Ga0134055_1142639All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria629Open in IMG/M
3300012401|Ga0134055_1287478All Organisms → cellular organisms → Bacteria945Open in IMG/M
3300012923|Ga0137359_11686618All Organisms → cellular organisms → Bacteria521Open in IMG/M
3300012929|Ga0137404_11459712All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria632Open in IMG/M
3300012948|Ga0126375_11646597All Organisms → cellular organisms → Bacteria554Open in IMG/M
3300012972|Ga0134077_10004787All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria4131Open in IMG/M
3300015373|Ga0132257_104019639All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria535Open in IMG/M
3300015374|Ga0132255_104376587All Organisms → cellular organisms → Bacteria599Open in IMG/M
3300018028|Ga0184608_10381393All Organisms → cellular organisms → Bacteria615Open in IMG/M
3300018072|Ga0184635_10247898All Organisms → cellular organisms → Bacteria705Open in IMG/M
3300018469|Ga0190270_10099504All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2223Open in IMG/M
3300019229|Ga0180116_1118361All Organisms → cellular organisms → Bacteria727Open in IMG/M
3300019249|Ga0184648_1434481All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria569Open in IMG/M
3300019249|Ga0184648_1505096All Organisms → cellular organisms → Bacteria1266Open in IMG/M
3300019259|Ga0184646_1215199All Organisms → cellular organisms → Bacteria642Open in IMG/M
3300019269|Ga0184644_1592592All Organisms → cellular organisms → Bacteria957Open in IMG/M
3300021151|Ga0179584_1388027All Organisms → cellular organisms → Bacteria604Open in IMG/M
3300021560|Ga0126371_10281181All Organisms → cellular organisms → Bacteria1786Open in IMG/M
3300021560|Ga0126371_13029672All Organisms → cellular organisms → Bacteria569Open in IMG/M
3300022195|Ga0222625_1665866All Organisms → cellular organisms → Bacteria667Open in IMG/M
3300022467|Ga0224712_10103600All Organisms → cellular organisms → Bacteria1210Open in IMG/M
3300022532|Ga0242655_10208185All Organisms → cellular organisms → Bacteria601Open in IMG/M
3300026089|Ga0207648_12180841All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria515Open in IMG/M
3300026118|Ga0207675_101771362All Organisms → cellular organisms → Bacteria637Open in IMG/M
3300026295|Ga0209234_1072892All Organisms → cellular organisms → Bacteria1306Open in IMG/M
3300026301|Ga0209238_1091878All Organisms → cellular organisms → Bacteria1040Open in IMG/M
3300026334|Ga0209377_1242295All Organisms → cellular organisms → Bacteria592Open in IMG/M
3300026547|Ga0209156_10223728All Organisms → cellular organisms → Bacteria888Open in IMG/M
3300027821|Ga0209811_10285235All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria634Open in IMG/M
3300027862|Ga0209701_10261020All Organisms → cellular organisms → Bacteria1009Open in IMG/M
3300027874|Ga0209465_10514910All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria597Open in IMG/M
3300028380|Ga0268265_10205403All Organisms → cellular organisms → Bacteria1712Open in IMG/M
3300028381|Ga0268264_10169966All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1971Open in IMG/M
3300028608|Ga0247819_10430272All Organisms → cellular organisms → Bacteria767Open in IMG/M
3300030993|Ga0308190_1091749All Organisms → cellular organisms → Bacteria653Open in IMG/M
3300031094|Ga0308199_1036039All Organisms → cellular organisms → Bacteria914Open in IMG/M
3300031114|Ga0308187_10019727All Organisms → cellular organisms → Bacteria1561Open in IMG/M
3300031114|Ga0308187_10024510All Organisms → cellular organisms → Bacteria1456Open in IMG/M
3300031231|Ga0170824_108351251All Organisms → cellular organisms → Bacteria1148Open in IMG/M
3300031474|Ga0170818_101586721All Organisms → cellular organisms → Bacteria606Open in IMG/M
3300031572|Ga0318515_10081456All Organisms → cellular organisms → Bacteria1678Open in IMG/M
3300031719|Ga0306917_10834697All Organisms → cellular organisms → Bacteria722Open in IMG/M
3300031720|Ga0307469_10123151All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella aerolata1880Open in IMG/M
3300031744|Ga0306918_11515684All Organisms → cellular organisms → Bacteria512Open in IMG/M
3300031777|Ga0318543_10145926All Organisms → cellular organisms → Bacteria1038Open in IMG/M
3300031798|Ga0318523_10468804All Organisms → cellular organisms → Bacteria624Open in IMG/M
3300031820|Ga0307473_10148703All Organisms → cellular organisms → Bacteria1329Open in IMG/M
3300031833|Ga0310917_10072357All Organisms → cellular organisms → Bacteria2166Open in IMG/M
3300031833|Ga0310917_11148921All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria517Open in IMG/M
3300031941|Ga0310912_11501673All Organisms → cellular organisms → Bacteria507Open in IMG/M
3300032003|Ga0310897_10100175Not Available1150Open in IMG/M
3300032012|Ga0310902_10317212All Organisms → cellular organisms → Bacteria965Open in IMG/M
3300032025|Ga0318507_10085872All Organisms → cellular organisms → Bacteria1297Open in IMG/M
3300032043|Ga0318556_10124876All Organisms → cellular organisms → Bacteria1318Open in IMG/M
3300032180|Ga0307471_101624313All Organisms → cellular organisms → Bacteria802Open in IMG/M
3300032205|Ga0307472_100083804All Organisms → cellular organisms → Bacteria2131Open in IMG/M
3300032211|Ga0310896_10030306All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2027Open in IMG/M
3300033550|Ga0247829_10830648All Organisms → cellular organisms → Bacteria769Open in IMG/M
3300034480|Ga0314789_007460All Organisms → cellular organisms → Bacteria847Open in IMG/M
3300034661|Ga0314782_007198All Organisms → cellular organisms → Bacteria1590Open in IMG/M
3300034663|Ga0314784_004646All Organisms → cellular organisms → Bacteria1693Open in IMG/M
3300034668|Ga0314793_098107All Organisms → cellular organisms → Bacteria607Open in IMG/M
3300034675|Ga0314800_051759All Organisms → cellular organisms → Bacteria587Open in IMG/M
3300034677|Ga0314802_002103All Organisms → cellular organisms → Bacteria1498Open in IMG/M
3300034818|Ga0373950_0083204All Organisms → cellular organisms → Bacteria → Proteobacteria671Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil13.18%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil8.53%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil7.75%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil7.75%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil6.98%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere6.20%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment4.65%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil4.65%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.10%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere3.10%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.88%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil3.88%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.33%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.55%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.55%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil1.55%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.55%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.55%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.55%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.55%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil0.78%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring0.78%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.78%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.78%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.78%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.78%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.78%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.78%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil0.78%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.78%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand0.78%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.78%
Rhizosphere SoilHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil0.78%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.78%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.78%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil0.78%
Tropical Rainforest SoilEnvironmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil0.78%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300002562Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300003267Sugarcane bulk soil Sample L1EnvironmentalOpen in IMG/M
3300004267Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBioEnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005363Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005454Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136EnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005547Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaGEnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006791Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006893Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaGEnvironmentalOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009810Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30EnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010119Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_0_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010147Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010303Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300010862Boreal forest soil eukaryotic communities from Alaska, USA - C4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300012038Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT800_2EnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012401Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012972Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018072Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2EnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300019229Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_1_16_1Ra (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019249Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019259Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019269Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021151Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_06_16RNAfungal (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300022195Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022467Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022532Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026295Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026334Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)EnvironmentalOpen in IMG/M
3300026547Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)EnvironmentalOpen in IMG/M
3300027821Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027874Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028608Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6EnvironmentalOpen in IMG/M
3300030993Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031094Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_203 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031114Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031474Fir Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031572Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19EnvironmentalOpen in IMG/M
3300031719Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031744Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)EnvironmentalOpen in IMG/M
3300031777Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24EnvironmentalOpen in IMG/M
3300031798Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031833Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178EnvironmentalOpen in IMG/M
3300031941Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080EnvironmentalOpen in IMG/M
3300032003Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1EnvironmentalOpen in IMG/M
3300032012Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3EnvironmentalOpen in IMG/M
3300032025Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20EnvironmentalOpen in IMG/M
3300032043Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032211Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1EnvironmentalOpen in IMG/M
3300033550Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4EnvironmentalOpen in IMG/M
3300034480Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0R2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034661Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R3 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034663Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034668Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0R1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034675Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48R1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034677Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48R3 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034818Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI10216J12902_11937056513300000956SoilAVRLFEESAQEVMKMFSDGREDHLLAAHPKGQAGSDKIREIGGKFWPNEFAPH*
JGI25382J37095_1020039013300002562Grasslands SoilAVRLFQESAAEAIKMFKDGRDEHLLAAYPKSQEGSDKIREVGGKFWPNEFPPN*
soilL1_1013676423300003267Sugarcane Root And Bulk SoilPPESLRADHTVYLSAVKLFKESAGELLKMSSDGRDDHMHAAYPKSQEASDRIREVGGKFWPHEFPPH*
Ga0066396_1003411123300004267Tropical Forest SoilLARAHEEYLAAVRLFQRSAIETMKMFEDGDDGHLLAAYPASREGSDKIREIGVKFWEDEFPPN*
Ga0062595_10162516523300004479SoilAVALFQQSAIEVLKMFEDGRDDHLVAAYPLSQKASDKIREVGGKFWPNEFAPN*
Ga0066688_1031338613300005178SoilVRLFQRSALEVLKMFDDGGEEHLRAAYPLSQEGSDKIREVGAKFWPDEFPPN*
Ga0065707_1022134813300005295Switchgrass RhizosphereDDYLAAVRLFEESANEVMKMFSDGREDHLLAAHPKGQAGADKIREIGGKFWPNEFAPH*
Ga0070676_1138882913300005328Miscanthus RhizosphereRIRHLDPPASLRGDHEQYLAAVRLFEESAVEAMKMFKDGRDDHLLAAYPKSQEGSDKIREVGGKLWPSEFPPN*
Ga0066388_10651055423300005332Tropical Forest SoilAVQLFQKSALEVLKMFDDGKDDHLLAAYPLSLEGSNKIRVIGAQFWRDEFSPN*
Ga0068869_10068726623300005334Miscanthus RhizosphereHEDYLAAVRLFEESASEAMKMFDDGREDHLLAAHPKAQAGTDKIREIGGKFWPNEFAPH*
Ga0070669_10051945613300005353Switchgrass RhizosphereVRLLRESAVEAMKMFKDGREDHLLTAYPKSQAASDKIREVGGKLWPNEFPPN*
Ga0008090_1394149813300005363Tropical Rainforest SoilAHEEYLAAVRLFQQSVLETRKMFEDGDDGHLLAAYPASREGSDKIREIGVKFWEDEFPPH
Ga0066682_1059726113300005450SoilEYLSAVRLFKESAAEVLKMFTDGRDDHMLVAYPKSQEGSNKIREVGGKFWPHEFPPN*
Ga0066687_1083716623300005454SoilAVELFEKSALEVLKMFDDGNDDHLLAAYPLSQEGSNKIREIGAKFWQDEFPPN*
Ga0070706_10002798383300005467Corn, Switchgrass And Miscanthus RhizosphereAVQLFQKSALEVLKMFDDGNDDHLLAAYPLSLEGSNKIRAIGAEFWRDEFQPN*
Ga0070693_10129263613300005547Corn, Switchgrass And Miscanthus RhizosphereAAVRQFEQSAHEVMKMFSDGREEHLLAAHPSGQAGADKIREIGGKFWPNEFAPH*
Ga0066661_1074686913300005554SoilAHDDYLAAVELFQKSALEVIKMFDDGNDEHLLAAYPLSQEGSDKIREIGVRFWQDEFPPN
Ga0066698_1030016413300005558SoilAVRLFKESAAEVLKMFTDGRDDHMLVAYPKSQEGSNKIREVGGKFWPHEFPPH*
Ga0068861_10130083923300005719Switchgrass RhizosphereASLRPAHEEYLAAVRLFQQSAVEVLKMFDDGRDDHLLAAYPLSQEGSDKIREVGLRFWPGEFPPN*
Ga0066903_10028379743300005764Tropical Forest SoilPSLAGPHGEYLGAVRLFQQSAIETLKMFEDGDDGHLLAAYPASREGSDKVREVGVKFWEDEFPPH*
Ga0066903_10513410223300005764Tropical Forest SoilPSLAGPHGEYLGAVRLFQQSAIETLKMFEDGDDGHLLAAYPVSREGSDKIREIGVKFWEDEFPPH*
Ga0066903_10878811913300005764Tropical Forest SoilHDDYLAAVRLFEQSAVEVLKMFDDGNDEHLLAAYPMSQEGSNKIREIGVKFWEDEFPPH*
Ga0066653_1010491813300006791SoilPSLQSAHSDYLGAVRLFQRSALEVLKMFDDGGEEHLRAAYPLSQEGSDKIREVGAKFWPDEFPPN*
Ga0066653_1046108013300006791SoilQRSAVEVLKMFDDGSEEHLRTAHPFGLEGSDKIREVGAKFWPDEFPPN*
Ga0079220_1171031613300006806Agricultural SoilAIALLQRSAIELQKMFDDGNNEHLLAAYPLSREASNKIREVGVKFWLDEFPPN*
Ga0075434_10221986013300006871Populus RhizosphereAVRLFQESAVEVLKMFEDGRDDHMLAAYPKSQEGSNKIRELGGKFWPNEFPPN*
Ga0073928_1063762223300006893Iron-Sulfur Acid SpringDHEEYLEAVRLFKQSTLEMLKMFDDSNDEHLVTAFPLSHEGSNKIREVGARFWQDAFPPN
Ga0075424_10005988953300006904Populus RhizosphereEHEQYLAAVRLFQEAAVEANKMFTDGREDHLLAAYPKSQEGSDKIREVGGKFWSNEFPPN
Ga0075436_10080904613300006914Populus RhizosphereLQLFQQSTLEMLKVFDDGNDEHLTTAYPLSLEGSNKIREVGVKLWPDEFPPN*
Ga0099791_1018933413300007255Vadose Zone SoilPAHDEYGAAVRLFHKSAVEVSKIFADGREDHLRAAYPLAQEASDKIREIGGRFWPGEFPAN*
Ga0099791_1039671013300007255Vadose Zone SoilPPASLRGEHGEYLAAVRLFRESALEVLKMFEDGRDDHMLAAYPKSQEGANKIREVGGKFWPDEFRPN*
Ga0099791_1040145823300007255Vadose Zone SoilREIYLDAVRLLRESAVEAMKMFKDGREDHLLTAYPKSQEASDKIREVGGKFWPSEFPPN*
Ga0099791_1044396313300007255Vadose Zone SoilREIYLDAVRLLRESAVEAMKMFKDGREDHLVTAYPKSQEASDKIREVGGKFWPNEFPPN*
Ga0099829_1002540213300009038Vadose Zone SoilHEQYLAAVRFFQESAVEAIKMFKDGREEHLLAAYPKSQEGSDKIMRVGGKFWPNEFPPN*
Ga0075418_1023229513300009100Populus RhizosphereIRLFEESATEAMQMFKDGREEHLLAAYPKSQVASDKIREVGGKFWPNEFPPN*
Ga0114129_1184753213300009147Populus RhizosphereVRLFKQSAIEVLKLFDDGRDDHLLAAYPLSQKGSDKIREVGAKFWPEEFPPN*
Ga0114129_1257536013300009147Populus RhizospherePPATLRAQHDEYLAAVRLFEESANEVMKMFSDGREDHLLAAHPKGQAGADKIREIGGKFWPQEFAPH*
Ga0111538_1302183513300009156Populus RhizosphereNDHQIYLDGVRLLRESAVEAMKMFKDGREDHLLTAYPKSQEASDKIREVGGKFWPNEFPPN*
Ga0075423_1264945113300009162Populus RhizosphereTSLRNDREIYLDAVRLLRESVVEAMKMFKDGREDHLVTAYPKSQEASDKIREVGGKFWPNEFPPN*
Ga0105088_104665713300009810Groundwater SandPPSVKREHDEYLDAIRLFHQSAIEVLKMFQDGRDDHMNAAYPLSQKASDKIREVGGKFWPDEFPPN*
Ga0126380_1123989113300010043Tropical Forest SoilPPASIQRDHEEYLSAIELFQKSAVEVLRMFEDGREEHMLAAYPLGQKATDKIREVGGKFWPNEFAPN*
Ga0126384_1019134813300010046Tropical Forest SoilAHLRALAPPPTLQTAHEQYLGALALFQRSAVEVLRMFEDGRDDHMLAAYPHSQKASDTIREVGSRFWPNEFPPN*
Ga0126373_1079647713300010048Tropical Forest SoilLAAAHEEYLAAVRLFQQSALETLKMFDDGDDAHLLAAYPIGQEGSDKIREVGVKFWRDEFPPH*
Ga0127452_102476423300010119Grasslands SoilLRPAHDEYGAAVRLFHKSAVEVSKIFADGREDHLRAAYPLAQEASDKIREIGGRFWPGEFPPN*
Ga0126319_135496623300010147SoilVAVRLFEESANEVMKMFGDGREDHLLAAHPKGQAGADKIREIGGKFWPNEFAPH*
Ga0134082_1049325513300010303Grasslands SoilAVRLFHKSAVEVSKIFADGREDHLRAAHPLAQEASDKIREIGGRFWPGEFPPN*
Ga0126372_1248107713300010360Tropical Forest SoilHEEYLAAIDLFEQSAVEIMKMFTDGRDDHLNAAYPLSQLASNKIREVGLKFWRDEFPAN*
Ga0126379_1269258123300010366Tropical Forest SoilSLARSHNDYLAAVRLFEQSAVEVLKMFDDGNDEHLLAAYPLSQEGSDKIREVGARFWQDEFTPH*
Ga0126381_10091719223300010376Tropical Forest SoilGPHAEYLAAVRLFQQSAIETLKMFEDGDDGHLLTAHPASREGSDKIREIGVKFWEDEFPPH*
Ga0126383_1336682813300010398Tropical Forest SoilEEYLVAVRLFQQSALETLKMFDDGDDGHLLAAYPASQEGSDKIREVGTKFWQDEFPPH*
Ga0134122_1337917213300010400Terrestrial SoilPATVQADHDEYLAAIRLFQESATEVLRMFNDGRDDHMMAAYPLGQTAADKIREVGGKFWPNEFPPN*
Ga0134123_1004037743300010403Terrestrial SoilLRNDREVYLDAVRLLRESAVEAMQMFKDGREDHLLIAYPKSQAASDKIREVGGKLWPNEFPPN*
Ga0126348_104413713300010862Boreal Forest SoilEPPATLRGEHEEYLAAVRLFQESAVEAIKMFADGREEHLLAAYPKGQAGSDKIRQVGGKFWPDEFPPN*
Ga0150983_1568162113300011120Forest SoilAVALFQQSALETLKLFDDGNDDHLLAAYPFSQEASNKIREVGAKFWQDEFPPN*
Ga0137392_1164086913300011269Vadose Zone SoilPTSLRSEHEQYLAAVRLFQESAVEAIKMFKDGREEHLLAAYPKSQEGSDKIMRVGGKFWPNEFPPN*
Ga0137391_1039090823300011270Vadose Zone SoilYLTAVRLFQESAVEAIKMFKDGREEHLLAAYPKSQEGSDKIMRVGGKFWPNEFPPN*
Ga0137431_112984213300012038SoilSLRGDHEEYLSAVRLFQVSAAEVQKMFTDGQDDHMKAAYPKGQEASDKIREVGGKFWPQEYPPH*
Ga0137374_1025085913300012204Vadose Zone SoilARLLALDPPASLRGEHGEYLAAVRLFQESAVEVLRMFEDGRDDHMLAAYPKSQEGSNKIREVGGKFWPNEFPPN*
Ga0137362_1167809323300012205Vadose Zone SoilAAVGLFQKSALEVLKMFDDGNDDHLLAAYPLSQEGSNKIREVGAQFWQDEFPPN*
Ga0137380_1107007813300012206Vadose Zone SoilPPASLRGEHGEYLAAVRLFQESAVEVLKMFEDGRDEHMLAAYPKSQEGSNKIREVGGKFWPNEFPPN*
Ga0137381_1035560913300012207Vadose Zone SoilAVRLFQRSALEVLKMFDDGGEEHLRAAYPLSQEGSDKIREVGAKFWPDEFPPN*
Ga0137376_1150683113300012208Vadose Zone SoilASLRNDHEQYLAAVGLFQQAALEVLKMFKDGQEDHLLAAYPKSQEGSDKIREVGGKFWPNEFPPN*
Ga0137377_1129921223300012211Vadose Zone SoilSFRNDHQIYLTAVRLLQESAVEAMKMFKDGSEEHLLAAYPKSQEASDKIREVGGKFWPNEFPPN*
Ga0150985_10393490313300012212Avena Fatua RhizosphereRAHDDYLAAVELFEKSALEVLKMFDDGNDDHLLAAYPLSQEGSNKIREIGAKFWQDEFPPN*
Ga0134055_114263923300012401Grasslands SoilPPTSLRSEHLEYLLAVRLFKESAAEVLKMFTDGRDDHMLVAYPKSQEGSNKIREVGGKFWPHEFPPH*
Ga0134055_128747813300012401Grasslands SoilHKSAVEVSKIFADGREDHLRAAYPLAQEASDKIREIGGRFWPGEFPPN*
Ga0137359_1168661813300012923Vadose Zone SoilRAHDEYLAAVGLFQKSALEVLKMFDDGDDDHLLAAYPFSQEASNKIREVGAQFWQDEFPPN*
Ga0137404_1145971223300012929Vadose Zone SoilVRLFEQSAVEVLKMFDDGRDDHLLAAYPLSQKGSDKIMEVGGRFWPGEFPPN*
Ga0126375_1164659723300012948Tropical Forest SoilSHNDYLAAVRLFEQSAVEVLKMFDDGNDEHLLAAYPASQQASDKIREVGVKFWQDEFPAH
Ga0134077_1000478753300012972Grasslands SoilEYLLAVRLFKESAAEVLKMFTDGRDDHMLVAYPKSQEGSNKIREVGGKFWPHEFPPH*
Ga0132257_10401963913300015373Arabidopsis RhizosphereDDYLAAVRLFEESASEVMKMFADGREDHLLAAHPKGQAGADKIREIGGRFWPNEFAPH*
Ga0132255_10437658723300015374Arabidopsis RhizosphereSLRNDHEQYLAAVGLFQQAAVEVLKMFGDGREDHLLAAYPKSQEGSDKIREVGGKFWPNEFPPN*
Ga0184608_1038139313300018028Groundwater SedimentMRALEPPASLKKDHEQYLAAIVLFQESAVEANKMFKDGQEDHLLAAYPKSQKGSDKIREVGGKFWPNEFPPN
Ga0184635_1024789823300018072Groundwater SedimentSLRREHEEYVSAVRLFKESAVEVLKMFEDGRDDHMIAAYPKSQEGSDKIREVGGKFWPNEFPPN
Ga0190270_1009950413300018469SoilPESLRAQHDDYLVAVRLFEESAHEVMKMFVDGREEHLLAAHPKGQAGADKIREIGGKFWPNEFAPH
Ga0180116_111836123300019229Groundwater SedimentLEPPPSVQREHDEYLAAVRLFQQSTAEVLKMFSDGRDDHLMAAYPLGQQASDKIREVGGKFWPNEFPPN
Ga0184648_143448123300019249Groundwater SedimentAAVRLFQESAVEVLKMFEDGRDDHMLAAYPKSQEGSNKIREVGGKFWPNEFPPN
Ga0184648_150509623300019249Groundwater SedimentVSAVRLFKESAVEVLKMFEDGRDDHMIAAYPKSQEGSDKIREVGGKFWPNEFPPN
Ga0184646_121519923300019259Groundwater SedimentVGLFHRSAIEVLKMFADGRDDHLNAAYPLSQQASDKIREIGVKF
Ga0184644_159259213300019269Groundwater SedimentRGDHEQYLAAVRLFEESAVEAMKMFKDGRDDHLLAAYPKSQEGSDKIREVGGKFWPSEFPPN
Ga0179584_138802713300021151Vadose Zone SoilAVRLLRESVVEGMKMFKDGREDHLLTAYPKSQEASDKIREVGGKFWPSEFPPN
Ga0126371_1028118133300021560Tropical Forest SoilRAAHEEYLAAVRLFKQSAIEVLKLFDDGRDDHLLAAYPLSQEGSDKIREVGGKFWPEEFPPN
Ga0126371_1302967223300021560Tropical Forest SoilYLAAVRLFEQSALEVLKMFEDGNDEHLLAAYPPSQEGSNKIREVGAKFWQDEFTPH
Ga0222625_166586613300022195Groundwater SedimentAVRLFQQSAVEVLKMFDDGRDDHLLAAYPLSQEGSDKIREVGGRFWPGEFPPN
Ga0224712_1010360023300022467Corn, Switchgrass And Miscanthus RhizosphereAEYLAAIQLFEQSAVEELKMFNDRNDEHLLAAHSLSQEGTNKIREVGIQFWRDEYPPN
Ga0242655_1020818513300022532SoilLEGAHKEYLAAVQLFQQSALETLKMFDDGDDGHLLAAYPVSQEGSDKIREVGTKFWQDEFPPH
Ga0207648_1218084123300026089Miscanthus RhizosphereLEPPTSLRNDHQIYLDAVRLLRESAVEAMKMFKDGREDHLLTAYPKSQAASDKIREVGGKLWPNEFPPN
Ga0207675_10177136213300026118Switchgrass RhizosphereVALFQQSAIEVLKMFEDGRDDHLIAAYPFSQKASDKIREVGGKFWPNEFAPN
Ga0209234_107289213300026295Grasslands SoilLDAVRLLRESVVEGMKMFKDGREDHLLTAYPKSQEASDKIREVGGKFWPSEFPPN
Ga0209238_109187813300026301Grasslands SoilLFHKSAVEVSKIFADGREDHLRAAYPLAQEASDKIREIGGRFWPGEFPPN
Ga0209377_124229523300026334SoilRGLDPPASLRNDQQIYLTAVRLLQESAVEALKMFKDGSEGHLLAAYPKSQEASDKIREVGGKFWPNEFPPN
Ga0209156_1022372823300026547SoilEEYLSAVRFFEESAVELLKMFKDGRDDHMLAAYPKSQQGSDKIREVGGKFWPNEFPAN
Ga0209811_1028523513300027821Surface SoilAIGLFQQSTVEILKMFADGREDHLMAAYPLGQQATDKIREVGGKFWPNEFPPN
Ga0209701_1026102013300027862Vadose Zone SoilEYLAAVRLFQESAVEVLKMFEDGRDDHMLAAYPKSQEGSNKIREVGGKFWPNEFPPN
Ga0209465_1051491013300027874Tropical Forest SoilSLRNDHEQYLAAVRLFEESAVELQKMFKDGQDDHMLVAYPKSQEGSDKIREVGGKFWPHEFPPH
Ga0268265_1020540333300028380Switchgrass RhizosphereLRNDHQIYLDGVRLLRESAVEAMKMFKDGREDHLLTAYPKSQEASDKIREVGGKFWPNEFPPN
Ga0268264_1016996613300028381Switchgrass RhizosphereSLRAPHEDYLAAVRLFEESASEAMKMFDDGREDHLLAAHPKAQAGTDKIREIGGKFWPNEFAPH
Ga0247819_1043027213300028608SoilLFQESAVEANKMFKDGKEDHLLAAYPKSQEGSDKIREVGGKFWPNEFPPN
Ga0308190_109174913300030993SoilGAREEYLAAVRLFQQSALETLKMFDDGDDEHLLASYPVSQEGSDKIRKVGAKFWRDEFPP
Ga0308199_103603913300031094SoilASLRNDHAQYLAAVRLFQQSAAEAVKMFKDGREDHLLAAYPKSQEGSDKIREVGGKFWPNEFPPN
Ga0308187_1001972713300031114SoilQPPPTVERDHQEYLAAVALFQQSAIEVLRMFEDGRDDHLMAAYPLSQKASDKIREVGGKFWPNEFAPN
Ga0308187_1002451013300031114SoilPPAALRGEHEHYLTAVGLFEESAVEALRMFKDGRDDHLVAAYPKSQKGSDMIREVGGKFWPNEFPPN
Ga0170824_10835125113300031231Forest SoilVRLFQESAVEVLKMFDDGRDDHLLAAYPLSQEGSDKIREVGGRFWPGEFPPN
Ga0170818_10158672123300031474Forest SoilFERAHDEYLAAVGLFQKSALEVLKMFDDGNDDHLLAAYPLSQEGSNKIREVGAQFWQDEFTPN
Ga0318515_1008145623300031572SoilEYLAAVRLVEQSALEVLKMFDDGNDEHLLAAYPMSREGSDKIREVGAKFWEDEFPPH
Ga0306917_1083469713300031719SoilVQLFQKSALEVLKMFDDGNDDHLLAAYPLSLEGSNKIRAVGAQFWRDEFPPN
Ga0307469_1012315133300031720Hardwood Forest SoilEYLAAVRLFQQSAVEVLKMFDDGRDDHLLAAYPLSQEGSDKIREVGLRFWPGEFPPN
Ga0306918_1151568413300031744SoilAVRLFQQSVLETRKMFEDGDDGHLLAAYPASREGSDKIREIGVKFWEDEFPPH
Ga0318543_1014592613300031777SoilLAAVRLFQQSVLETRKMFEDGDDGHLLAAYPASREGSDKIRAIGVKFWEDEFPPH
Ga0318523_1046880423300031798SoilLAAVRLFQQSVLETRKMFEDGDDGHLLAAYPASREGSDKIREIGVKFWEDEFPPH
Ga0307473_1014870323300031820Hardwood Forest SoilEEYLAAVRLFQQSAIEVLKLFDDGRDDHLLAAYPLSQEGSDKIREVGAKFWPEEFPPN
Ga0310917_1007235713300031833SoilLARAHEEYLAAVRLFQQSVLETRKMFEDGDDGHLLAAYPASREGSDKIREIGVKFWEDEFPPH
Ga0310917_1114892113300031833SoilEYLAAVRLFEQSAVEVLKMFDDGNDEHLLAAYPMSKEGSDKIREIGVKFWEDEFPPH
Ga0310912_1150167323300031941SoilLVHAHDEYLAAVRLFQQSALEALKMFEDGNDEHLLAAYPLSQLGSDKIREVGAKFWEDEFPPH
Ga0310897_1010017523300032003SoilERYIAAVRLLQESAVEALKMFKDGKDDHLLAAYPKSQEASDLIREVGGKFWPNEFPPN
Ga0310902_1031721213300032012SoilRAQHDDYLVAVRLFEESAQEIMKMFVDGREEHLLAAHPKGQAGADKIREIGGKFWPNEFAPH
Ga0318507_1008587223300032025SoilEYLAAVRLFQQSVLETRKMFEDGDDGHLLAAYPASREGSDKIREIGVKFWEDEFPPH
Ga0318556_1012487613300032043SoilHDDYLAAVRLFEQSAVEVLKMFDDGNDEHLLAAYPMSHEGSDKIREIGAKFWEDEFPPN
Ga0307471_10162431313300032180Hardwood Forest SoilASVRHEHEEYLTAVDLFRQSVVEVLKMFEDGRDDHLNAAYPLSQQASDKIREVGLKFWRDEFPPN
Ga0307472_10008380433300032205Hardwood Forest SoilMRALQPPDSLRKDHDTYLVAVRLFQESAVEANKMFKDGREDHLLAAYPKSQEGSDKIREVGGKFWPNEFPPN
Ga0310896_1003030613300032211SoilRLFEESAQEIMKMFVDGREEHLLAAHPKGQAGADKIREIGGKFWPNEFAPH
Ga0247829_1083064813300033550SoilVRLFEESAHEVMKMFSDGREDHLLAAHPKGQAGADKIREIGGKFWPNEFAPH
Ga0314789_007460_2_1693300034480SoilLAAVRLFEESATEAMKMFTDGREDHLLAAHPKGQAGADKIREIGGKFWPNEFAPH
Ga0314782_007198_1_2043300034661SoilPPESLRAQHDDYLVAVRLFEESAQEIMKMFVDGREEHLLAAHPKGQAGADKIREIGGKFWPNEFAPH
Ga0314784_004646_1500_16913300034663SoilLRVQHDDYLAAVGLFEQSANEIMKMFEDGRDDHLLAAYPKGQEGADKIREVGGKFWPNEFPPH
Ga0314793_098107_3_1553300034668SoilLFQESAVEANKMFADGREDHLLAAYPKSQEGSDKIREVGGKFWPNEFPPN
Ga0314800_051759_1_2043300034675SoilAPASLRVEHDDYLAAVGLFEQSANEIMKMFEDGRDDHLLAAYPKGQEGADKIREVGGKFWPNEFPPH
Ga0314802_002103_1290_14963300034677SoilQPPESLRAQHDDYLVAVRLFEESAQEIMKMFVDGREEHLLAAHPKGQAGADKIREIGGKFWPNEFAPH
Ga0373950_0083204_461_6703300034818Rhizosphere SoilLEPPGSLVRDHERYIAAVRLLQESAVEALKMFKDGKDDHLLAAYPKSQEASDLIREVGGKFWPNEFPPN

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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