NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F063520

Metagenome Family F063520

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F063520
Family Type Metagenome
Number of Sequences 129
Average Sequence Length 88 residues
Representative Sequence YSVNVSGSNLTAETFLDVRFISPGSNESAVVLNWQKGLVARHDVPAGTASGVWAINGVRAHQIETDHTDSFVPVSATITVSP
Number of Associated Samples 73
Number of Associated Scaffolds 129

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 5.60 %
% of genes near scaffold ends (potentially truncated) 89.92 %
% of genes from short scaffolds (< 2000 bps) 92.25 %
Associated GOLD sequencing projects 70
AlphaFold2 3D model prediction Yes
3D model pTM-score0.69

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (65.891 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil
(24.031 % of family members)
Environment Ontology (ENVO) Unclassified
(34.884 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(58.915 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134.136.138.140.142.144.146.148.150.152.154.156.158.160.162.
14ZMR_04386320
2JGI1027J12803_1003144762
3JGI1027J12803_1006882782
4Ga0062590_1023518842
5Ga0063356_1006732051
6Ga0063356_1008631201
7Ga0066395_104071722
8Ga0062591_1013709661
9Ga0065705_111409411
10Ga0065707_111299391
11Ga0066388_1003870521
12Ga0066388_1028483891
13Ga0066388_1055792501
14Ga0066388_1061228061
15Ga0066388_1078751462
16Ga0066686_109636311
17Ga0066691_108260162
18Ga0068864_1025537852
19Ga0066905_1020304772
20Ga0066905_1022608151
21Ga0066903_1056433901
22Ga0066903_1072701202
23Ga0066903_1078088922
24Ga0066665_101305932
25Ga0066665_115171742
26Ga0075428_1007015171
27Ga0075433_107445891
28Ga0075425_1002928631
29Ga0075425_1008765141
30Ga0075425_1010503511
31Ga0075434_1001803881
32Ga0075434_1007084051
33Ga0075434_1020989381
34Ga0075434_1026583862
35Ga0075429_1018698071
36Ga0075426_106877261
37Ga0075424_1010994771
38Ga0075424_1011106541
39Ga0075424_1021704962
40Ga0075436_1000798961
41Ga0079219_109399962
42Ga0075435_1011869692
43Ga0066710_1036655981
44Ga0066710_1040076842
45Ga0066710_1043042761
46Ga0111539_104002772
47Ga0066709_1002238745
48Ga0114129_104836533
49Ga0114129_111388561
50Ga0111538_104451771
51Ga0111538_117947732
52Ga0111538_126921832
53Ga0075423_105938971
54Ga0075423_130348221
55Ga0105242_132451001
56Ga0126380_120630741
57Ga0126384_118437761
58Ga0126384_120294712
59Ga0126382_105454931
60Ga0126382_108541732
61Ga0126382_114872521
62Ga0126382_116271161
63Ga0126382_117767901
64Ga0126382_124649851
65Ga0126373_132857331
66Ga0134086_104316762
67Ga0126370_119787961
68Ga0126376_119776051
69Ga0126376_125654132
70Ga0126377_104284482
71Ga0126377_115036352
72Ga0126377_117193232
73Ga0126377_131553572
74Ga0126379_109878992
75Ga0126379_113287372
76Ga0126381_1016211912
77Ga0126383_113200111
78Ga0126383_123311681
79Ga0134122_124198472
80Ga0105246_114818041
81Ga0157334_10719031
82Ga0126375_113032011
83Ga0126375_116325662
84Ga0126375_119298151
85Ga0164299_114019391
86Ga0126369_113478512
87Ga0126369_114757821
88Ga0126369_128209152
89Ga0163162_107798883
90Ga0157380_131667921
91Ga0132258_102479764
92Ga0132258_107253991
93Ga0132258_116175952
94Ga0132258_118104692
95Ga0132256_1026435221
96Ga0132256_1026516512
97Ga0132257_1021009852
98Ga0132257_1027676641
99Ga0132255_1029299632
100Ga0132255_1029999062
101Ga0132255_1037403282
102Ga0132255_1041822662
103Ga0132255_1057923762
104Ga0182033_112334412
105Ga0182035_113472912
106Ga0182035_114026091
107Ga0182032_112746432
108Ga0182037_108710233
109Ga0182039_101613702
110Ga0182038_112984762
111Ga0187773_107789762
112Ga0187773_111609661
113Ga0126371_114438011
114Ga0126371_131572351
115Ga0126371_132282621
116Ga0247664_10503751
117Ga0209687_12509041
118Ga0209382_111636211
119Ga0306917_113545011
120Ga0306917_114390492
121Ga0307473_104141232
122Ga0307473_115436271
123Ga0310916_109571521
124Ga0306926_125820331
125Ga0310899_106592971
126Ga0310896_105586691
127Ga0306920_1029728982
128Ga0306920_1036166942
129Ga0306920_1037128592
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 30.91%    Coil/Unstructured: 69.09%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

1020304050607080YSVNVSGSNLTAETFLDVRFISPGSNESAVVLNWQKGLVARHDVPAGTASGVWAINGVRAHQIETDHTDSFVPVSATITVSPSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.69
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
66.7%33.3%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Soil
Terrestrial Soil
Tropical Forest Soil
Grasslands Soil
Switchgrass Rhizosphere
Soil
Agricultural Soil
Soil
Grasslands Soil
Soil
Soil
Hardwood Forest Soil
Soil
Tropical Peatland
Tropical Forest Soil
Arabidopsis Rhizosphere
Switchgrass Rhizosphere
Arabidopsis Thaliana Rhizosphere
Switchgrass Rhizosphere
Populus Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Arabidopsis Rhizosphere
Switchgrass, Maize And Mischanthus Litter
24.0%5.4%3.1%10.1%8.5%8.5%19.4%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
4ZMR_043863202170459017Switchgrass, Maize And Mischanthus LitterYSVSVSGSNLTSETFLDVRFISPGSNASNVVLNWQRGVAASHDVVAGTASGNWAIIGVRAHEIETDHTSSFVPVSATITVSP
JGI1027J12803_10031447623300000955SoilVGSSFSANFSGSNLTSQTFFDVRFTSPGNNNSDVVLNWQRGLEVSHDVAVGTVAGSYTIIGVRAHEIETDHTGIFFPVSATITVSP*
JGI1027J12803_10068827823300000955SoilSVSAELYTPSILMPIPVVETVRFDRSVVPAGASYSVDVSGSYLTSEMFFDVRFISPETTEFAVVLNWQRGFTGEHDLPAGTTLGNWTINGVRAHEIETDHTGNFFPVSATITVSR*
Ga0062590_10235188423300004157SoilSLNSQTFFDVRFSFPGSTASDVVLNWQKGLTASHGVATGTAQGTWTITGVRPHQVEAEHTGDFLPVLATISVAQ*
Ga0063356_10067320513300004463Arabidopsis Thaliana RhizosphereLETFFDVRFVSPGSTSSVVVLNWQRGIAASHGVLAGTTSGRWTITAVRPHEIETDHTGNFFPVSATITVSP*
Ga0063356_10086312013300004463Arabidopsis Thaliana RhizosphereSAPAVVAPGASYSVEVSGSNLTSQMFFDVRFTDPRSNDSAVVLNWQKGLTASHEVPAGIAPGGWTITGVRAHEIETDHTGTFVPVSATIGVSR*
Ga0066395_1040717223300004633Tropical Forest SoilSLLVPAQIITDLRFDRTSVVAGSSYSVNVSGSNLTPQTFFDVRFTSPGSNAWNVAPNWQRGVAVSHDVPVGLAPGSWTINGVRAHEVETDHTGIFFPVSATITVSP*
Ga0062591_10137096613300004643SoilMPIPVVGAVRFDRMVVPAGSSYSVDLSGSNLTPEMFFDVRLTSPESNESVVALNWQNGLAENHEVPAGIASGSWKITGVRAHKIETDDTGIFFP
Ga0065705_1114094113300005294Switchgrass RhizosphereVIGDLHFDRTNVAAGSTYSVNVSGSNLTAETFFDVRFTRPGSNDSDVALNWQKGLSGRHGIPNDTASGIWKITGVRAHEIETDHTDSFVPVSATITVSP*
Ga0065707_1112993913300005295Switchgrass RhizosphereLSAVHQHPTVLSNQSAVVLNWQKGLVVRHDVPAGIASGVWAINGVRAHQIETDHTGSFASVSATITVSP*
Ga0066388_10038705213300005332Tropical Forest SoilRASVATGSFYSVNFSGPNLIDEMFFDVRFTAPGSKESVVVLNWQKGLLANHSVPAGTTSGIWTINGVRAHKIETDYSGNFVPVSAKITVSP*
Ga0066388_10284838913300005332Tropical Forest SoilVGAVRFDRMVVPAGSSYSVDLSGSNLAPDMFFDVRFTSPENNESAVALNWQKGLAENHEVPAGIASGSWKITGVRAHKIETNHTGIFFPVSATLTVSP*
Ga0066388_10557925013300005332Tropical Forest SoilNLPMDALFDVRFIIPGTNESVVALNWQRGLAQRHDVPAGVTPGAWAINGVRPHQEEADHTGDFIPVSATITVVELPWQ*
Ga0066388_10612280613300005332Tropical Forest SoilVFVGAFYSADVSGSNLTSETFFDVRFVSPGSNESGVALNWQKGFVATHDVPAGTASGVWTINGVRAHQVETDHTGSFVPVSAKITVP*
Ga0066388_10787514623300005332Tropical Forest SoilVRFTAPGSNTSSVVLNWQKGLAASHAVAVGTPAGKWTITGVRAHQVEGDHSGDFVPVYATITVAP*
Ga0066686_1096363113300005446SoilEMFFDVRFIGPGSNESAVVLNWQRGLAVKHDVPAGTPLGAWIINGVRAHEIETDHTGIFFPVSATITVSP*
Ga0066691_1082601623300005586SoilITAGTFFDVRFTSPGSNAFAVVLNWQRGLAASHDVPIGTASGNWTINGVRAHQIEADHTGGFVPVSATITVSPSN*
Ga0068864_10255378523300005618Switchgrass RhizosphereRTNVAAGGSYAVTVSGSSLTPQTFFDVRFSAPGSGAASVVLNWQKGLVVSHNLPAGIAAGAWTITGVRAHELEADHTDSFVPVSATITVSR*
Ga0066905_10203047723300005713Tropical Forest SoilPAGSSYSVDLSGSSLTAKMFFDVRFISPESNESAVVLNWQKGLAASHEVPAGIAPGSWKIMGVRAHKIETDHTGNFSQVSATITVSP*
Ga0066905_10226081513300005713Tropical Forest SoilGSNLTPQTFFDVRFISPDSNESAVVLNWQRGLVANHDVPAGIASGNWTINGMRAHQVETDHTGGFFRVSATITVSP*
Ga0066903_10564339013300005764Tropical Forest SoilFTSPGSNESAVVLNWQRGLGARHDVPAGTASGMWAINGVRAHQIETDHTGNFVPASATITVFP*
Ga0066903_10727012023300005764Tropical Forest SoilTDLQFDRMNVAAGSSYSVKLSGSNLTSQTFFDVRFTSPGSNDSAVVLNWQRGLTANHDVAAGTPSGRWTINGVRAHEIQADHTGSLIPVSATITVSP*
Ga0066903_10780889223300005764Tropical Forest SoilDVRFTAPGSNDSDVALNWQKGVTANHSVPAGIRSGNWTINGVRVHQIETDHSGNFSPLSITITVSP*
Ga0066665_1013059323300006796SoilVLAVRFLRNFSASVSGSDILTSQTFFDVRVTAPGSNASDVALNWQRGLAASHAVSVGTPAGNWTVTGVRAQQVEADHTGDFIPVNATITVAP*
Ga0066665_1151717423300006796SoilGLAVVIANTSYSVNISGSGLTTETFFDVRFTDPESHTGVVLNWQRGLAASHGVPIGTASGNWTINGVRAHQIEEDHTSSFVPVSATITVSH*
Ga0075428_10070151713300006844Populus RhizosphereSNLTPKMFFDVRFISPESSESAVALNWQRGLFASHDVPASIARGSWKITGVRAHEIETDHSGDFFSVSATITVSP*
Ga0075433_1074458913300006852Populus RhizosphereVALNWQKGLSENHAVIVGTAAGNWTITGVRAHQVEADHTGDFLPVFARITVLP*
Ga0075425_10029286313300006854Populus RhizospherePAGSSYSVGLSGSNLTPDMFFDVRFTSPENNESAVALTWQTGLVENHDVPAGLAPGNWKITGVRAHQIETDHTGIFFPASATITVSP*
Ga0075425_10087651413300006854Populus RhizosphereDLRFDQTSVVAGSSYSLSVSGSNLTSETFLDVRFISPGSNESAVVLNWQRGLAASHDVAAGTASGTWTINGVRAHEIETDHTGDFVPVSATITVSP*
Ga0075425_10105035113300006854Populus RhizosphereNVAAGSSYSVNLSGSNLTPQTFFDVRFTRPGSTESAVLLNWQRGLAASHAVAAGTTSGSWTINGVRPHEIETDHTGSFIPVSATITVSP*
Ga0075434_10018038813300006871Populus RhizosphereGSNLTSQTFFDVRFTAPGSNASNVALNWQTGVASSHDVPPALALGNWTINGVRAHEVETDHTGIFFPVSATITVVP*
Ga0075434_10070840513300006871Populus RhizosphereMSELYVPPLSVPAPFVAELRFDRSNVAAGSSFKVSFSGSSLAPQSFFDVRFSAPESNSYQVVLNWQKGVELSHSVPASTAPGMWTINGVRAHQMETDHTGSFNPVSAVITVSQ*
Ga0075434_10209893813300006871Populus RhizosphereSVVAGSSYSLSVSGSNLTSETFLDVRFISPGSNESAVVLNWQRGLAASHDVAAGTASGTWTINGVRAHEIETDHTGDFVPVSATITVSRWI*
Ga0075434_10265838623300006871Populus RhizosphereMVVPAGSSFSVDLSGSNLTTEMFFDVRFISPESNQSAVVLNWQKGLAASHEVPAGIAPGSWKIAGVRAHKIEANHTGIFFPVSAT
Ga0075429_10186980713300006880Populus RhizosphereLYVPSVLAPTPVVTGMRFDRTTSVAGGSFSVSISGTNLTTQTFFDVRFTSPGTNESAVVLNWQQGFATSHDLATGIAAGRWTVIGVRAHEIETDHTGSFFPVSATLTVFP*
Ga0075426_1068772613300006903Populus RhizosphereVAGTSYSVNVSVADITAQTFFDVRFIAPGNKTSDVVLNWQRGVTASHGVPAGTASGIWTINGVRPHQIETDHTGSFIPVSATITVSP*
Ga0075424_10109947713300006904Populus RhizosphereSDLRFDVTAVTAGGSFSVNIAGSNLTSQTFFDVRFKAPGSNAYSVLLNWQKGLVASHDVPAGTAAGSWTIDGVRAHEIEADHTGSFFPVSATIIVSP*
Ga0075424_10111065413300006904Populus RhizosphereFSFSGSSLTPQSFFDVRFSAPESNSYQVVLNWQKGVELSHSVPASTAPGMWTINGVRAHQMETDHTGSFNPVSAVITVSQ*
Ga0075424_10217049623300006904Populus RhizosphereLSVSGPNLTSETFLDVRFISPGSNESAVVLNWQRGLAASHDVAAGTASGTWTINGVRAHEIETDHTGDFVPVSATITVSR*
Ga0075436_10007989613300006914Populus RhizosphereVVSRFELDRSVVASGSSYSVELSGSNLTPPMFFDIRVRRSGSNDPFVVLNWQRGLAANHDVPAGIASGSWTITGVRAHEIETDHTGNFFPVSATITVSQ*
Ga0079219_1093999623300006954Agricultural SoilFDVRFSAQGSNATDVVLNWQRGPAASHALPSGTASGIWTIKGVRAHQIETDHTGTFFPISATIRVFNPLSPQTLVESNAAAR*
Ga0075435_10118696923300007076Populus RhizosphereVNLSGSNLTPQTFFDVRFTAPGSSDSDVVLNWQRGLAATHSVPAGTALGIWTITGVRAHQVETDHTGNFVQVSATMTVSP*
Ga0066710_10366559813300009012Grasslands SoilNSYSVNVSGSNLTSQAFFDVRVTAPGSYTSDVVLNWQRGLAPIHSVPAGTASGIWTITGVRAHEIETDHTGNFVPVSATITVSP
Ga0066710_10400768423300009012Grasslands SoilVLAVRFLRNFSASVSGSDILTSQTFFDVRFTAPGSNASDVALNWQRGLVANHDVSVGTPAGNWTVTGVRAHQVETDHTGDFDPVYATIMVAP
Ga0066710_10430427613300009012Grasslands SoilLYIPSILIPTPVVKTVRFDRVVVPAGSSYSVDLSGSNLTPEMFFDVRFIGPGSNESAVVLNWQRGLAVKHDVPAGTPLGAWIINGVRAHEIETDHTGIFFPVSATITVSP
Ga0111539_1040027723300009094Populus RhizosphereLAKFSGSNLTSQTFFDVRFTAPGSNASNVALNWQTGVASSHDVPPALALGNWTINGVRAHEVETDHTGIFFPVSATITVVP*
Ga0066709_10022387453300009137Grasslands SoilGSNLRPDTFFDVRFISPGSNESAVALNWQRGLAQRHDLPAGIAPGAWTINGVRAHLEDVDHTGDFIPISAT*
Ga0114129_1048365333300009147Populus RhizosphereSQTFFDVRFTAPGSNVSDVALNWQRGLAASHSVPVGTSAGNWTVTGVRPHQIEADHTGDFVPVFATITVAP*
Ga0114129_1113885613300009147Populus RhizosphereTNLAPQPFFDVRFISPESSESAVALNWQRGLFASHDVPASIARGSWKITGVRAHEIETDHSGDFFSVSATITVSP*
Ga0111538_1044517713300009156Populus RhizosphereTPETFFDIRFTSPESNVSDVVLNWQRGVAASHAVPVGTAPGTWTINSVRAHQIETDHTGSFIPVRATITVSPALSN*
Ga0111538_1179477323300009156Populus RhizosphereAILVPAAVVTDLQFDRTTAGAGASFSVNVSGLNLDAQTFFDVRFTSPGNADSAVVLNWQRGLTATHTVAADTTPGDWTINGVRAHQIETDHTGRFVAVSATITVPR*
Ga0111538_1269218323300009156Populus RhizosphereGSSYSVNVSGFNLTPETFFDIRFISPESNVSDVVLNWQRGVAASHALPAGTAPGTWTINGVRAHQSETDHTGSFVPVQATITISPAP*
Ga0075423_1059389713300009162Populus RhizosphereKTVRFDRVVVPAGSSFSVDLSGSNLTTEMFFDVRFISPESSESAVALNWQRGLFASHDVPASIARGSWKITGVRAHEIETDHSGDFFSVSATITVSP*
Ga0075423_1303482213300009162Populus RhizosphereYDVRFTSPESNESAVALNWQKGFAENHEAPAGLASGSWKITSVRAHEIETDHTGIFFPVSATITVP*
Ga0105242_1324510013300009176Miscanthus RhizosphereIQFDRTTVVAGTSYSVNVSGVNLTPQTFFDVRFTAPGSNATDVVLNWQRGVASAHGVSAATSPGIWTINGIRAHQQEEDHTGDLLPVSARITVSH*
Ga0126380_1206307413300010043Tropical Forest SoilVRFDRVAVPAGSSYSVDLSGSNLTQEMFFDVRFTSPESNQSVVVLNWQKGLVENHEVPAGIALGSWTITDVRAHKIETDHTGIFFPVSATIIVSP*
Ga0126384_1184377613300010046Tropical Forest SoilPAPIITALRFDRSTVVAGTSYLVTVSGSNLTPQTYFDVRFTTPGSNDSAVVLNWQRGLATSHAVSVGTAVGIWTITGIRAHDIETDHTGNFVPVSATITVAP*
Ga0126384_1202947123300010046Tropical Forest SoilSSYSASIAGSDQLTSQTFFDVRFIAPGSNGSDVVLNWQKGLAASHALSIGTAAGTWTITGVRAHQVEGDHAGNFVPVYATIRVVP*
Ga0126382_1054549313300010047Tropical Forest SoilNLTSQTFFDVRCTSPGSNVSMIVLNWQRGVTATHDVPAGTASGTWTISGVRAHEIETDHTGNFFPVSAPMIVLP*
Ga0126382_1085417323300010047Tropical Forest SoilVRFDRMVVPAGSSYSVDLSGSNLTPEMFFDVRFTSPESNESAVALNWQQGLVAQHEVPAALGSWTITGVRAHKIETDHTGSFFPVSATLTVSP*
Ga0126382_1148725213300010047Tropical Forest SoilQTFFDVRFTSPGSNSSAVALNWQRGLTASHVVAVGTAAGNWTVTGVRAHQAEADHSGNFDPVYATITVAP*
Ga0126382_1162711613300010047Tropical Forest SoilTGSFYSVNFSGPNLIDEMFFDVRFTAPGSNDSVVVLNWQKGLVAKHSVPADTTSGVWTINGVRAHKTETDHNGNFVPVPATITVSQ*
Ga0126382_1177679013300010047Tropical Forest SoilTPQTFFDVRFTGPGSNDSAVVLNWQRGLAASHGVAAGTAFGLWTINGVRAHEIETDHTGSFFPVSAAITVSP*
Ga0126382_1246498513300010047Tropical Forest SoilYSVNVSGSNLTAETFLDVRFISPGSNESAVVLNWQKGLVARHDVPAGTASGVWAINGVRAHQIETDHTDSFVPVSATITVSP*
Ga0126373_1328573313300010048Tropical Forest SoilYSVTFPGPNLSDETFFDVRYAAPGSNDSGVAVNWQIGLAANHNVPADMTLGIWTITGVRAHQIETDHSGNFVPVWATITVSP*
Ga0134086_1043167623300010323Grasslands SoilFDVRFTDPESHTGVVSNWQRGLAASHGVPIGTASGNWTINGVRAHQIEEDHTSSFVPVSATITVSP*
Ga0126370_1197879613300010358Tropical Forest SoilIVTDLQFDRTSVVAGSSYSVDVSGSNLTSQTFFDVRFISPGSNESAVVLNWQKGLAARHDILAATASGVWAINGIRAHQIETDHTGNFVPVSATITVSR*
Ga0126376_1197760513300010359Tropical Forest SoilTSISGSNLTDQTFFDVRFTKPGSNSSTVALNWQKGVVADHDVPAGSASGVWIINGVRAHSVEGDHTGNFFPVSATITVP*
Ga0126376_1256541323300010359Tropical Forest SoilAELYTPAVLVPVSIVADLQFDRMNVVAGASYLATVSGSNLTPDTFFDVRFSSPGSNESAVVLNWQKGLVAKHDVPGGCASGVWTINGVRAHQIETDHAGNFVTFSAAITVSP*
Ga0126377_1042844823300010362Tropical Forest SoilSYSVNVSGTNLTPETFFDIRFISPDSKESAVVLNWQRGVAASHGVLVGTASGVWTINGARAHQIETDHTGDFFPISATITVSR*
Ga0126377_1150363523300010362Tropical Forest SoilPVVEKVRFDRVAVPAGSSYSVDLSGSNLTQEMFFDVRFTSPESNQSVVVLNWQKGLVENHEVPAGIALGSWTITDVRAHKIETDHTGIFFPVSATIIVSP*
Ga0126377_1171932323300010362Tropical Forest SoilTAETFFDVEFTGPESNDSVVALNWQKGLSASHSVPAIIASGNWTITGLRAHKIETDHTGNFFPVSATITVSP*
Ga0126377_1315535723300010362Tropical Forest SoilSDFRFDRTNVVAGGSYSVTVSGSNLTTQTFFDVRVTAPGSSTSDVVLNWQKGLVASHDVPAGIAAGTWTVTGVRAHEIESDHIDTFVPVSATITVLQ*
Ga0126379_1098789923300010366Tropical Forest SoilASYTVNVSGFNLTPDTFFDVRFISPDGNESAVALNWQRGLAQIHDVPAGVASGDWTINGVRAHRVETDHTGSFASVSATITVSP*
Ga0126379_1132873723300010366Tropical Forest SoilAPDMFFDVRFSSPQSNESAVALNWQKGLAENHEVPTGIASGSWKITGVLAHKIETDHTGIFFPVSATLTVSP*
Ga0126381_10162119123300010376Tropical Forest SoilVVTGGSYLVNLSGSNLTPQTFFDVQFTAPGSNTSNVALNWQTGLTASHTVSLDTAPGNWTINGVRAHQNEADHTGDFIPVSATITVVQVSP*
Ga0126383_1132001113300010398Tropical Forest SoilLNISGSNLTPETFFDIRFIGPDTDSDVTLNWQKGLAASHDLPTGTPLGKWTINGVRAHEGEADHTGNFFPVSATITVSP*
Ga0126383_1233116813300010398Tropical Forest SoilNLTDETFFDVHFTAPWSNDSGVVLDWQEGVVANHTVPAGITSGIWTINAVRAHQIETDHTGNFVPVSAMITVFP*
Ga0134122_1241984723300010400Terrestrial SoilNLSGSNLTQETFFDVRVTSPGTNESTVVLNWQRGLAVSHGLPFGTVSGRWTITGVRAHEIETDHTGGFFPVLATITVSP*
Ga0105246_1148180413300011119Miscanthus RhizosphereKFDRTSVVAGASYSAGFSGSYLTSQTFFDVRFTAPGTNASDVSLNWQRGLDTNHDVPAGIAPGNWTINGVRAHEIETDHTGGFFPVSATIMVYP*
Ga0157334_107190313300012509SoilGGGAFVITFGPDLVVTEFRFDRANVPSGGSFSVNISGPNLTSQTYFDVRFTSPGSNESADALNWQRGLAASHEVAAGTALGTWTINGVRAHEIETDHTGDFFPVSSTITVSP*
Ga0126375_1130320113300012948Tropical Forest SoilVVVPAGSSYSVDLSGSNLTPEMFFDVRFIGPGSNESAVVLNWQRGLAVKHDVPAGTPLGAWIINGVRAHEIETDHTGIFFPVSATITVSP*
Ga0126375_1163256623300012948Tropical Forest SoilVTNLQFDHMNVFAGASYWADISGSNLTPETFFDVRFVSPGSNESAVALNWQKGLAERHEVPRGTASGEWTINGVRAHQVETDHTGSFVPVSAKITVEMSLQHESQEADSGGQIKCTPER*
Ga0126375_1192981513300012948Tropical Forest SoilMFFDVRFISPGSNQSSVVLNWQKGLAASHEVPAGIAPGSWKIMGVRAHKIETDHTGNFSQVSATITVSP*
Ga0164299_1140193913300012958SoilSAEVYIPSILVPIPVVRAVRFDRMVVPTGSSFSVDLSGSNLTREMFFDIRFTSPESNESVVALNWQNGLAENHELPAGLAPGSWTITGVRAHRIETDHTGNFFPVSATITVSP*
Ga0126369_1134785123300012971Tropical Forest SoilSGSNLTAQTFFDVRLTSPGSTDSAVVSNWQRGVAASHDVPVGIAAGSWTINGVRAHEVETDHTGIFFPVSATITVSP*
Ga0126369_1147578213300012971Tropical Forest SoilGSSFSVNLSGSNLAPEMFFDVRFTSPESNESAVALNWQEGLVANHEVPRSLALGSWTITDVRAHEIETDHTGIFFPVSATITVSP*
Ga0126369_1282091523300012971Tropical Forest SoilMVVPAGSSFSVDLSGSNLTPEMFFDVRLTSPESNESVVALNWQKGLAENHEVPAGLAPGSWTITGVRAHKIEGNHTGIFFPVSATLTVSP*
Ga0163162_1077988833300013306Switchgrass RhizosphereSSYSVDLSGSNLTPEMFFDVRFTSPESNELVVALNWQKGLAGNHEVPAGIASGSWTITGVRAHKIETDHTGIFFPVSATLTVSP*
Ga0157380_1316679213300014326Switchgrass RhizosphereVLKPVPVVNNLRIDRSVVSAGSSFAADFSGSNLTSEMFFDVRFISPETNESAVVLNWQKGQKGSHVVEAGVASGNWTITGVRAHQIETDHTEGFLPVLASVTVLP*
Ga0132258_1024797643300015371Arabidopsis RhizosphereVVPVGSSYSVDFSGSNLTPDLFFDVRFTNPESSESAVALNWQKGLAENHQVPADLAPGSWKITSVRTHAIETDHTGNFFPVSATITVSR*
Ga0132258_1072539913300015371Arabidopsis RhizosphereMLLPDLLIRSKLSGSNLTSQTFFDVRFTSPGGNDSIVVFNWQRGLTASHDVAAGIASGRWTINGVRAHEIEADHTGSFVPVSATITVSP*
Ga0132258_1161759523300015371Arabidopsis RhizosphereLLDDEQPLGGSYSVNLSGSNLSAQTFFDVRFTAPGSDSSDVVLNWQRGVVLSHDVPTDLASGMWAINGVRAHEIETDHTGNFDPVSATIIVSR*
Ga0132258_1181046923300015371Arabidopsis RhizosphereGLQFDRTTVAAGSSYSVNVSGSNLTSETFFDVRFTGPGSNAAAFVLNWQKGVAAKHDIPAGAASGVWTITGVRAHQIETDHIGIFVPASATITVFP*
Ga0132256_10264352213300015372Arabidopsis RhizosphereMFFDVRFTTPESNESAVALNWQNRLAENHEAPAGLAPGSWTITGVRAHEIETDHTGIFFPVSATLTVSP*
Ga0132256_10265165123300015372Arabidopsis RhizosphereMFFDVRFTSPENNESVVALSWQKGLAENHEVTAGVASGSWRITGVRAHKIETDHPGIFFPVSATLTVSP*
Ga0132257_10210098523300015373Arabidopsis RhizosphereAGLGFDRMSVVAGTSYSVNVSGASITAQTFFDVRFIAPGSRTSDVVLNWQRGVTATHEVPIGTASGIWTINGVRPHQIETDHTGSFIPVSATITVSP*
Ga0132257_10276766413300015373Arabidopsis RhizosphereIPSILVPIPVVRAVRLNQMVVPARSSYSVDLSGSNLTPEMFFDVRFTSPESNELVVALNWQKGLAGNHEVPAGIASGSWTITGVRAHKIETDHTGIFFPVSATLTVSP*
Ga0132255_10292996323300015374Arabidopsis RhizosphereAVRFDRMVVPAGSSFSVDLSGSNLTPEMFFDVRFTSPESNESAVALNWQNGLAENHEVPAGLAPGSWTITDVRAHELETDHTGNFYPVSATITVSP*
Ga0132255_10299990623300015374Arabidopsis RhizosphereSSFAVDISGSNLTPQTFFDVRFAAPDSDAYQVVLNWQKGLEASHSVPAGTAPGMWTINGVRAHQIETDHTGEFVPVSATITVSS*
Ga0132255_10374032823300015374Arabidopsis RhizosphereGGSSYLVDVSGSNLTSETFFDIRFTSPGTNGSDVALNWQRGVTAGHYVPASTALGIWNINGVRAHQIETDHTGSFSPVSATIMVAP*
Ga0132255_10418226623300015374Arabidopsis RhizosphereAEVYIPSVLMPIPVVRGVRFDRMVVPAGSSYSVDFSGSNLTPEMFYDVRFTSPESNESAVALNWQKGFAENHEAPAGLASGSWKITSVRAHEIETDHTGIFFPVSATITVP*
Ga0132255_10579237623300015374Arabidopsis RhizosphereGLGFDRTTVATGSTYSVNVSGPNLTPQTFFDVRFIAPGSAASDVVLNWQRGVTTNHDVPFGTASGIWAITGVRPHQIESDHTGSFIRVSATITVSR*
Ga0182033_1123344123300016319SoilFDLAVVGASYSVDISGSGITAGTFFDVRFTSPGNNASPVVLNWQRGLAASHDVPIGTASRNWTINGVRAHRIETDHTGNFYPVSATITVSQ
Ga0182035_1134729123300016341SoilDRTSVLVGGSFSVNISGPNLTTQTFFDVRYTSPGSNESAVVLNWQRGLAASHDVTAGTASGTWTINGVRAHEIETDHTGDFFPVTATITVFPMTPSIQIFSDLGKAPQPR
Ga0182035_1140260913300016341SoilLTTETFFDVRFISPGSNESAVVLNWQKGPAASHALPAGIAPGIWTINGVRAHEIETDHTGIFFPVSATITVSNPLSP
Ga0182032_1127464323300016357SoilNNLTDKTFFDIRFTAPGSNDSGVVLNWQTGTAANHSVTAGTTPGSWTITGVRAHQIETDHDGNFVPLSAVITVVTR
Ga0182037_1087102333300016404SoilLTADTFFDVRFTSPGSTRSAVVLNWQTGTVESHDVPAGLAPGKWTINGVRPHETETDHSGDFVLVSATITVSQ
Ga0182039_1016137023300016422SoilFDRMVVPAGSSYSVDLSGSNLTPEMFFDVRFTSPESNESAVALNWQKGLAENHKVPASLAPGSWTITGVRAHKIEPDHTGSFFPVSATIRVSPDRFNCTKCANPFLD
Ga0182038_1129847623300016445SoilTFGPDLVVTELRFDRTSVLVGGSFSVNISGPNLTTQTFFDVRYTSPGSNESAVVLNWQRGLAASHDVTAGTASGTWTINGVRAHEIETDHTGDFFPVTATITVFPMTPSIQIFSDLGKAPQPH
Ga0187773_1077897623300018064Tropical PeatlandFTSTFSGSNLAVDTFFDVRFSAQGSNATDVVLNWQRGPAASHALPAGTPSGTWTIKGVRAHQIETDHTGNFEPVSATITVSP
Ga0187773_1116096613300018064Tropical PeatlandVRFTSPESNESAVVLNWQKGLVANHDVPAGLALGSWTITGVRAHEIETDHTGIFFPVTATITVSP
Ga0126371_1144380113300021560Tropical Forest SoilSVVAGSSYAASFSGLNLTDETFFDVRYTASGSNDSSVALNWQKGIAANHSVPADISSGIWMINGVRAHQIETDHSGNFVPVLATITVSP
Ga0126371_1315723513300021560Tropical Forest SoilVSGFNLTSQTFFDVRFVSPGGNQSLVVLNWQKGIVAGHDVPAGTASGVWNINGVRAHQIQTDHTGNFVPVSATITVSP
Ga0126371_1322826213300021560Tropical Forest SoilGSSYSVDLSGSNLTSGMFFDVRFTSPESNESAVVLNWQQGLTENHAIPAGLVSGSWTITGVRAHQIETDHTGTFFPVSATITVTP
Ga0247664_105037513300024232SoilAPVITDFHFDRTTVVAGTSYSVNVSGTNLAPQTFFDVRFTSPGSNESAVVLNWQKGLAASHDVPVGIASGVWAINGVRAHQIETDHTGTFVTVSASITVFP
Ga0209687_125090413300026322SoilFDIRFTTPGSNASDVVLNWQRGVAARHDVSVGAAVGRWTINGVRAHEVETDHTGWFIPVSETMTVSR
Ga0209382_1116362113300027909Populus RhizosphereGSDLTAQTFFDVRFTAPGSNASAVVLNWQRGMALSHDVSPDTAAGNWTINGVRPHEIETDHTGIFFPVSATITVTP
Ga0306917_1135450113300031719SoilIPVVNAVRFDRMVVPAGSSYSVALSGSNLAPDMFFDVRFTSPERNRSAVVWNWQKGLVENHEVPVGLSPGSWTITSVRAHEIETDHTGIFFPVSATITVSPLVPSIQIFSDHGKAPQPH
Ga0306917_1143904923300031719SoilTNLRFDRTNTVTGSSYSLNISGSNLTPETFFDIRFIGPGHTDFDVALNWQKGLAARHDVPGGTASGVWTINGVRAHQIETDHTGDFVPASATLTVSP
Ga0307473_1041412323300031820Hardwood Forest SoilLRFDQTSLAAGSSFNVSVSGSNLTSQSFFDVRFSAPGSNSYQVVLNWQKGLEASHIVPAGTASGMWTINGVRAHQIETDQTGIFNPVSAVITVSP
Ga0307473_1154362713300031820Hardwood Forest SoilQFDRMNTVAGSSYSVSISGSNLNSQTFFDVRFASPGSNQSAVVLNWQKGFAARHDVAAGIASGAWAINGVRAHQIETDHTGNFVPVSATITVSP
Ga0310916_1095715213300031942SoilFSVNISGPNLTTQTFFDVRYTSPGSNESAVVLNWQRGLAASHDVTAGTASGTWTINGVRAHEIETDHTGDFFPVTATITVFPMTPSIQIFSDLGKAPQPH
Ga0306926_1258203313300031954SoilNWWSVSAGNSYSVNVSGSNLTSQTFFDVRVTAPGSYTSDVILNWQKGLAAIHSVPAGTASGMWTISGVRAHEIETDHTGNFYPVSATITVSQ
Ga0310899_1065929713300032017SoilYIPSVLVPTPVVTGMQFDRTTIVAGGSFSVSISGPNLTTQTFFDVRFTSPGTTESAVVLNWQKGLATSHDVAAGIASGNWTVIGVRAHEIETDHTGSFFPVSATITVSP
Ga0310896_1055866913300032211SoilYSVNISGSNLTPQTFFDVRFIAPGSTLSDVAMNWQNGVAGDHFVLAGTAPGIWTINGVRAHEVETDHTGSFVPVNATITVSP
Ga0306920_10297289823300032261SoilLPVSATIVLVAPFVESFRFDRSEVVSGSSFSADISGSNLTSQTFFDVQFTAPGSNGAAVALNWQRGLSMSHDVPAEMAIGSWTINGVRAHEIETDHTGNFSPVSATITVSP
Ga0306920_10361669423300032261SoilFFDVRFISPGSNESAVALNWQKGLVQIHDVPAGTPLGAWTINGVRGHQIETDHTGNFVPVSATITVSQGIIFLRRGGN
Ga0306920_10371285923300032261SoilLTTQTFFDVRYTSPGSNESAVVLNWQRGLAASHDVTAGTASGTWTINGVRAHEIETDHTGDFFPVTATITVFPMTPSIQIFSDLGKAPQPH


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.