Basic Information | |
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Family ID | F063392 |
Family Type | Metagenome |
Number of Sequences | 129 |
Average Sequence Length | 42 residues |
Representative Sequence | MFADEMGATLDLSPAAKLALIATIAAAIQAAVAEEGQKLTWVL |
Number of Associated Samples | 83 |
Number of Associated Scaffolds | 129 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 41.18 % |
% of genes near scaffold ends (potentially truncated) | 10.85 % |
% of genes from short scaffolds (< 2000 bps) | 10.85 % |
Associated GOLD sequencing projects | 74 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.56 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (97.674 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (59.690 % of family members) |
Environment Ontology (ENVO) | Unclassified (82.946 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Unclassified (58.140 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62. |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 52.11% β-sheet: 0.00% Coil/Unstructured: 47.89% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.56 |
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Visualization |
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All Organisms Unclassified |
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Visualization |
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Vadose Zone Soil Tropical Forest Soil Soil Grasslands Soil Soil Soil Tropical Forest Soil Forest Soil Avena Fatua Rhizosphere |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
Ga0066699_106093783 | 3300005561 | Soil | MMFSDEMGATLDLSPAARMALIEKIAAAIQTAVTEKREET* |
Ga0066702_101067201 | 3300005575 | Soil | MMFSDEMGATLDLSPAARMALIEKIAAAIQTAVTEKR |
Ga0066903_1065576461 | 3300005764 | Tropical Forest Soil | MFAEEMGAILDLGPAAKMALIVKIAAAIEAAVAEERQRRA* |
Ga0099793_104397662 | 3300007258 | Vadose Zone Soil | MFADEMGATLVLSPAARVALISKIAAAIQAAVAEDRERLVCAL* |
Ga0099792_100683882 | 3300009143 | Vadose Zone Soil | MGATLDLSPAAKVALITTVAAAIEAAVAEEHERLACAQ* |
Ga0126372_131380041 | 3300010360 | Tropical Forest Soil | MGGTLGLSQAAKIALIATIPAAIQAAVAEERQQLTWVL* |
Ga0126378_104108582 | 3300010361 | Tropical Forest Soil | MGATLDLSPAAKAALIATISAAIQTAVAEETRGLTWAL* |
Ga0126378_116962392 | 3300010361 | Tropical Forest Soil | MFAAEMGATLDLSPAAKMALIVKIAAAIEAAVAEEKQKLT* |
Ga0126379_129186721 | 3300010366 | Tropical Forest Soil | KIFADEMGATLDLIPAAKAASIVTIAAAIHAAVAQ* |
Ga0126381_1010720344 | 3300010376 | Tropical Forest Soil | EKIFADEMGAILDLTPAAKMALIATITAAIQVAVGEESQRLTWLL* |
Ga0126381_1033764961 | 3300010376 | Tropical Forest Soil | MGATLDLSPAAKAALIATISAAIQTAVAKETRGLTWAL* |
Ga0137382_101686494 | 3300012200 | Vadose Zone Soil | FAHEMGATLDLSPAARMALIEKIAAAIQTAVTEKREET* |
Ga0137362_108187342 | 3300012205 | Vadose Zone Soil | FVEEMGATLDLSRAARVALIATIAAAIQAAGEEQERP* |
Ga0150985_1144538963 | 3300012212 | Avena Fatua Rhizosphere | MMFADEMGATLDLSPAARMALIEKIAAAIQTAVTEKREET* |
Ga0137361_109863373 | 3300012362 | Vadose Zone Soil | MMYADEMGASLDLSPAARMALIETTAAAIRTAIAEEQQ |
Ga0182036_106405842 | 3300016270 | Soil | EAIEAAEVMFADEIGATLDLSPAAKVVLISRIAAAIQAAVVEEREKLIYTE |
Ga0182041_116412981 | 3300016294 | Soil | RRSYRTAERMFAEEMGATLDLSPAAKLALTATISAAIQAAVAEDTRGLTPAL |
Ga0182041_118973452 | 3300016294 | Soil | FAEEMGATLDLSPAAKITLILKITAAIKAAVAEERQEPTRVL |
Ga0182033_102081651 | 3300016319 | Soil | AEAIEAAEVMFADEIGATLDLSPAAKVVLISRIAAAIQAAVVEEREKLIYTE |
Ga0182035_103892104 | 3300016341 | Soil | AELMFIKDMGVALDLSPAAKVALIAKIAAAIEAAVAEDRQRLTWVL |
Ga0182035_119644971 | 3300016341 | Soil | MGATLDLSPAAKLALIATIAAAIQAAVAEEGQKLTWVL |
Ga0182032_104305353 | 3300016357 | Soil | AVEAAEMTFAEEMGATLDLSPAAKMALIVKIAAAIEAAVAEEQKLT |
Ga0182032_104809712 | 3300016357 | Soil | FADEMGGTLGLSPAAKIALVATITAAIQAAIAEERQHLTWVL |
Ga0182034_101877574 | 3300016371 | Soil | GGTLGLSPAAKIALIATITAAIQAAVAEERQRLTPAL |
Ga0182034_115597142 | 3300016371 | Soil | MFADEMGATLDLSPAAKLALVATITAAIQAAVAEERQQLTWVANVRSL |
Ga0182034_115642932 | 3300016371 | Soil | EIMFAEEMGATLDLSPAAKMALILKITAAIEAAVAEERQELTWVL |
Ga0182040_101885243 | 3300016387 | Soil | MFAEEMGATLDLSPAAKLALIATIAAAIQAAVAEERPQLTSVP |
Ga0182039_113129141 | 3300016422 | Soil | EAAERMFAEEMGATLDLSPAAKLALIATIAAAIHAAVAEERRQLTWVV |
Ga0182039_117759851 | 3300016422 | Soil | EEMGATLDLTPAAKIALIATITAAIQAAVAEERQQLTGVL |
Ga0182039_118866821 | 3300016422 | Soil | MFAEEMGTTLDLSPAAKMALIATIAAAIQAAVAEEGQRLTWVL |
Ga0182038_107396421 | 3300016445 | Soil | IMFAEETGTTLDLIPAAKVALIVKIAAAIQSDVAEETQRLSWVL |
Ga0182038_111497932 | 3300016445 | Soil | ATLDLTSAAKTVLIATITAAIHAAVAEERQQLTWVA |
Ga0182038_120436852 | 3300016445 | Soil | AEKMFADEMGATLDLSPAAKLALIATIAAAIQAAVAEERQRLT |
Ga0066655_112799952 | 3300018431 | Grasslands Soil | EMMFADEMGAALDLSPAARMALIEKIAAAIRTAVAEVG |
Ga0210404_106478382 | 3300021088 | Soil | DEMGATLDLSPAAKVALITTVAAAIEAAVAEEQERIICAQ |
Ga0210409_113844421 | 3300021559 | Soil | IEAAEVMFTDEMGATLDLSPAAKVALITTVAAAIEAAVAEEQERIICAQ |
Ga0126371_100927784 | 3300021560 | Tropical Forest Soil | MGATLDLSPAAKAALIATISAAIQTAVAEETRGLTWAL |
Ga0208365_10505742 | 3300027070 | Forest Soil | MFADEMGVTLDLSPAAKVALISKIAAAIQAAVAEEREKLIYAE |
Ga0209488_105649372 | 3300027903 | Vadose Zone Soil | MGATLDLSPAAKVALITTVAAAIEAAVAEEQERLSCVQ |
Ga0209488_107001071 | 3300027903 | Vadose Zone Soil | GGNGAILDLSTTAKVALITTIAAAIEVAVVEEQERLSCAQ |
Ga0318516_100370861 | 3300031543 | Soil | MFAEEMGATLDLSPAAKLALIATIAAAIHAAVAEETEQLSGVGM |
Ga0318516_106296802 | 3300031543 | Soil | IEAAENIFAEEMGATLDLTAAAKTALIATITVAIHAAVAEERQQLTRLV |
Ga0318516_108504091 | 3300031543 | Soil | MGATLDLSPAAKMALIVKIAAAIEAAVTEEKQKLT |
Ga0318541_100389831 | 3300031545 | Soil | AAEKVCADEMGATLGLSPAAKVALIVKIAAAIEAAVAEERQQLT |
Ga0318541_100867704 | 3300031545 | Soil | AVEAAEMTFAEEMGATLDLSPAAKMALIVKIAAAIEAAVAEEKQKLT |
Ga0318541_100876834 | 3300031545 | Soil | MGGTLGLSQAAKIALIPTIPAAIQAAVAEERQEPKWVL |
Ga0318541_102768951 | 3300031545 | Soil | VEAAERIYADEMGATLDLSPAAKMTLIATITAAIQAAVAEETQKLTWVL |
Ga0318538_100314103 | 3300031546 | Soil | MFAEETGTTLDLSPAAKVALIVKIAAAIQSDVAEETQRLSWVL |
Ga0318515_102190061 | 3300031572 | Soil | TIEAAEIMFAEEMGATLDLSPAAKMALIVKIAAAIEAAVTEEKQKLT |
Ga0318515_106190982 | 3300031572 | Soil | AIEAAEIVFAEEMGATLDLSPAAKMALIVKIAAAIEAAVAEERQSSHGCCSLTSA |
Ga0310915_100881412 | 3300031573 | Soil | MGGTLGLSQAAKIALIPTIPAAIQAAVAEERQQLTWVL |
Ga0318555_100162491 | 3300031640 | Soil | FADEIGATLDLSPAAKAVLISRIAAAIQAAVVEEREKLIYTE |
Ga0318555_103331831 | 3300031640 | Soil | IFAEEMGVTLDLSPAAKITLIATITAAIQAAVAEERQQLTGVL |
Ga0318555_104728462 | 3300031640 | Soil | AAEIMFAEETGTTLDLSPAAKVALIVKIAAAIQSDVAEETQRLSWVL |
Ga0318574_1000583410 | 3300031680 | Soil | MFAEEMGATLDLSPAAKMALILKITAAIEAAVAEERQEL |
Ga0318560_100197631 | 3300031682 | Soil | ATLDLSPAAKVVLISRIAAAIQAAVVEEREKLIYTE |
Ga0318560_105343861 | 3300031682 | Soil | MFAQEMGATLDLSPAAKMALIVKIAAAIEAAVAEERQKLTWVL |
Ga0318496_102999731 | 3300031713 | Soil | MFADEIGATLDLSPAAKAVLISRIAAAIQAAVVEEREKLIYTE |
Ga0306917_100411679 | 3300031719 | Soil | AEIMFAEEMGATLDLSPAAKMALILKITAAIEAAVAEERQELPWVL |
Ga0318493_100392124 | 3300031723 | Soil | MFADEIGATLDLSPAAKVVLISRIAAAIQAAVVEEREKLIYTE |
Ga0318500_105587091 | 3300031724 | Soil | RRRKSLLAKMGGTLGLSQAAKIALIPTIPAAIQAAVAEERQQLTWVL |
Ga0318500_107187411 | 3300031724 | Soil | EEAVEAAEIMFAEEMGATLDLSPAAKMALIVKIAAAIEAAVDEEKQKLT |
Ga0318492_105983151 | 3300031748 | Soil | MFADEMGATLDLSPAAKLALVATITAAIQAAVAEERQRLTWVL |
Ga0318492_107124851 | 3300031748 | Soil | AERMFAEEMGATLDLSPAAKAALIATIAAAIQAAVAEETEQLSGAGM |
Ga0318494_108605642 | 3300031751 | Soil | GTTLDLSPAAKVALIVKIAAAIQSDVAEETQRLPWVL |
Ga0318537_100052407 | 3300031763 | Soil | NGSHLGPDPGSKNDLIATITAVIQAAIAEERQQLTSAL |
Ga0318509_101233094 | 3300031768 | Soil | MGATLDLSPAAKMALTVKIAAAIEAAVAEEKYKVTWVL |
Ga0318521_101986151 | 3300031770 | Soil | GTTLDLSPAAKVALIVKIAAAIQSDVAEETQRLSWVL |
Ga0318546_108231682 | 3300031771 | Soil | MFAEEMGATLDLSPAAKMALILKITAAIEAAVAEERQELTWVL |
Ga0318508_11293383 | 3300031780 | Soil | MFAEEMGATLDLSPAAKMALILKITAAIEAAVAEERQELTW |
Ga0318529_100539763 | 3300031792 | Soil | AEEMGATLDLSPAAKMALIVKIAAAIEAAVTEEKQKLT |
Ga0318529_103685031 | 3300031792 | Soil | TLDLSPAAKMALTVKIAAAIEAAVAEEKYKVTWVL |
Ga0318548_102402373 | 3300031793 | Soil | AEEMGATLDLSPAAKMALIVKIAAAIEAAVAEEKQKLT |
Ga0318576_105627161 | 3300031796 | Soil | VLDLSPAAKGALISKIAAAIQAAVAEERERLIGAQ |
Ga0318565_100914513 | 3300031799 | Soil | MFADEMGATLDLSPAAKLALIATIAAAIQAAVAEERRRLTLAM |
Ga0318497_101134823 | 3300031805 | Soil | PIEAAEIMFAEEMGATLDLSPAAKMALILKITAAIEAAVAEERQELTWVL |
Ga0318568_101347161 | 3300031819 | Soil | MFAEEMGATLDLSPAAKMALIVKIAAAIEAAVDEEKQKLT |
Ga0318567_105632241 | 3300031821 | Soil | MFVDEIGAVLDLSPAAKVALISKIAAAIQAAVAEERERLIGAQ |
Ga0310917_100307401 | 3300031833 | Soil | EIIFAEEMGATLDLSPAAKMALIVKIAAAIEAAVTEEKQKLT |
Ga0310917_101378403 | 3300031833 | Soil | EIMFVEETGTTLDLSPAAKVALIVKIAAAIQSDVAEETQRLSWVL |
Ga0310917_105506861 | 3300031833 | Soil | AERMFAEEMGATLDLSPAAKLALIATIAAAIHAAVAEERRQLTWVV |
Ga0310917_109064222 | 3300031833 | Soil | EKSFADEMGATLDLTAAAKTVLIATITAAIHAAVAEERQQPTWVL |
Ga0306919_100522948 | 3300031879 | Soil | EAAEIMFAEETGTTLDLIPAAKVALIVKIAAAIQSDVAEETQRLSWVL |
Ga0306919_102629971 | 3300031879 | Soil | EMGATLDLSPAAKLALIATIAAAIHAAVAEERRQLTWVV |
Ga0306919_103706162 | 3300031879 | Soil | MFADEMGATLDLSPAAKLALVATITAAIQAAVAEERQQLTWVL |
Ga0306925_118923731 | 3300031890 | Soil | AEIMFAEEMGATLDLSPAAKMALILKITAAIEAAVAEERQELTWVL |
Ga0318536_105503891 | 3300031893 | Soil | MFAEETGTTLDLSPAAKVALIVKIAAAIQSDVAEET |
Ga0318536_106183213 | 3300031893 | Soil | TLGLSPAAKIALVATITAAIQAAIAEERQHLTWVL |
Ga0318551_105411012 | 3300031896 | Soil | DEIGAVLDLSPAAKVALISKIAAAIQAAVAEERERLIGAQ |
Ga0306923_103443063 | 3300031910 | Soil | MFADEMGATLDLSPAAKLALIATIAAAIQAAVAEEGQKLTWVL |
Ga0306923_107387111 | 3300031910 | Soil | TLDLSPAAKLALIATIAAAIHAAVAEERRQLTWVV |
Ga0306921_105509953 | 3300031912 | Soil | MFVEETGTTLDLSPAAKVALIVKIAAAIQSDVAEETQRLSWVL |
Ga0310912_100738851 | 3300031941 | Soil | MFAEEMGATLDLSPAAKLALIATIAAAIHAAVAEERRQLTWVV |
Ga0310912_106501501 | 3300031941 | Soil | AVEAAERIYADEMGATLDLSPAAKMTLIATITAAIQAAVAEETQKLTWVL |
Ga0310912_107069371 | 3300031941 | Soil | EAAEIVFAEEMGATLDLSPAAKMALIVKIAAAIEAAVAEERQKLTWVL |
Ga0310912_108087091 | 3300031941 | Soil | IFADEMGGTLGLSPPAKIALVATITAAIQAAIAEERQHLTWVL |
Ga0310916_101091411 | 3300031942 | Soil | TLDLSPAAKAALIGTIAAAIQAAVAEEMRKLTPAL |
Ga0310913_102743421 | 3300031945 | Soil | AEKIFANEMGGTLGLSPAAKIALIATITAAIQAAVAEERQRLTPAL |
Ga0310913_111639222 | 3300031945 | Soil | MFADEMGATLDLSPAAKLALIATIAAAIQAAVAEEGQKLTWV |
Ga0310913_112584141 | 3300031945 | Soil | EAVEAAEMTFAEEMGATLDLSPAAKMALIVKIAAAIEAAVAKRNRKLT |
Ga0306926_114523982 | 3300031954 | Soil | AAEKIFADEMAVSLDLSPAAKMALIATITAAIQAAVAEEGQKLTWVL |
Ga0318530_100716141 | 3300031959 | Soil | ALDLSPAAKLALIATIAAAIQAAVAEERRRLTLAM |
Ga0306922_114805061 | 3300032001 | Soil | FAEETGTTLDLSPAAKVALIVKIAAAIQSDVAEETQRLSWVL |
Ga0318569_100952471 | 3300032010 | Soil | AIEAAEVMFADEIGATLDLSPAAKVVLISRIAAAIQAAVVEEREKLIYTE |
Ga0318549_102104373 | 3300032041 | Soil | MFAEEMGATLDLSPAAKMALILKITAAIEAAVAEER |
Ga0318558_100464033 | 3300032044 | Soil | MFAEETGTTLDLSPAAKVALIVKIAAAIQSDVAEETQRLSWV |
Ga0318532_100897221 | 3300032051 | Soil | MFADEMGATLDLSPAAKMALIVKIAAAIEAAVAEERLR |
Ga0318506_104090571 | 3300032052 | Soil | ERMFAEEMGATLDLSPAAKLALIATIAAAIHAAVAEETEQLSGVGM |
Ga0318533_111287981 | 3300032059 | Soil | ADEMGATLSLSATVKTALVATITAAIQAAVAEEMRRLTPAR |
Ga0318505_104223312 | 3300032060 | Soil | EAAEKIFADEMAVSLDLSPAAKMALIATITAAIQAAVAEEGQKLTWVL |
Ga0318504_102370112 | 3300032063 | Soil | AIEAAEIMFAEEMGATLDLSPAAKMALILKITAAIEAAVAEERQELTWVL |
Ga0318504_103127441 | 3300032063 | Soil | GGTLGLSPATKIALIATITAAIQAAVAEERQQLMWVP |
Ga0318514_102949661 | 3300032066 | Soil | AEKIFAEEMGATLDLTPAAKMALIATITGAIQAAVAEERQRLTPAL |
Ga0318553_101778771 | 3300032068 | Soil | DEMGATLDLSPAAKMALTVKIAAAIEAAVAEEKYKVTWVL |
Ga0306924_115610591 | 3300032076 | Soil | AERMFAEEMGATLDLSPAAKLALIATIAAAIQAAVAEERPQLTSVP |
Ga0306924_117508311 | 3300032076 | Soil | FAEEMGATLDLSPAAKMALIVKIAAAIEAAVTEEKQKLT |
Ga0318518_100716921 | 3300032090 | Soil | VEETGTTLDLSPAAKVALIVKIAAAIQSDVAEETQRLSWVL |
Ga0318518_102049484 | 3300032090 | Soil | MGATLDLTLAAKAALIATITAAIHAAVAEERQRLTPAL |
Ga0318518_102587501 | 3300032090 | Soil | MFAEETGATLDLSPAAKAALIAKIAAAIQATVAEKE |
Ga0318518_104801462 | 3300032090 | Soil | MGTTLDLSPVAKTALMKTITAAIQAAVAEERQQLKWVL |
Ga0318518_105744862 | 3300032090 | Soil | KIFADEMAVSLDLSPAAKMALIATITAAIQAAVAEEGQKLTWVL |
Ga0318540_102228663 | 3300032094 | Soil | GGTLGLSPAAKIALVATITAAIQAAIAEERQHLTWVL |
Ga0318540_102874211 | 3300032094 | Soil | AERIFAEEMGAPLDLTATAKTVLIATITAAIHAAVAEERQQLTWVA |
Ga0306920_1002846472 | 3300032261 | Soil | MGATLDLTPAAKIALIATITAAIQAAVAEERQQLTGVL |
Ga0306920_1040359202 | 3300032261 | Soil | EAAEKIFAEEMGATLDLSPAAKAALIATITAAIQAAVAEERQRLTPAL |
Ga0310914_115308772 | 3300033289 | Soil | AAEMTFAEEMGATLDLSPAAKMALIVKIAAAIEAAVAEEQKLT |
Ga0310914_115493162 | 3300033289 | Soil | MFADEMGATLDLSPAAKLALIATIAAAIQAAVAEEGQK |
Ga0310914_115939212 | 3300033289 | Soil | SLDLSPAAKMALIATITAAIQAAVAEEGQKLTWVL |
Ga0318519_103243491 | 3300033290 | Soil | SGGEMFADEMGATLDLSPAAKLALVATITAAIQAAVAEERQRLTWVL |
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