Metagenome Family F063169

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F063169
Family Type	Metagenome
Number of Sequences	130
Average Sequence Length	42 residues
Representative Sequence	MESQLIDDILQHLDKFEKTGDWFHFSLALDALDDLKKQIESI
Number of Associated Samples	79
Number of Associated Scaffolds	130

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	62.31 %
% of genes near scaffold ends (potentially truncated)	8.46 %
% of genes from short scaffolds (< 2000 bps)	73.08 %
Associated GOLD sequencing projects	66
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.64

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (84.615 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (45.385 % of family members)
Environment Ontology (ENVO)	Unclassified (90.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (94.615 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.29% β-sheet: 0.00% Coil/Unstructured: 45.71%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.64
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.64
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 130 Family Scaffolds
PF13730	HTH_36	2.31
PF02739	5_3_exonuc_N	2.31
PF08401	ArdcN	1.54
PF07486	Hydrolase_2	1.54
PF03796	DnaB_C	0.77

COG ID	Name	Functional Category	% Frequency in 130 Family Scaffolds
COG0258	5'-3' exonuclease Xni/ExoIX (flap endonuclease)	Replication, recombination and repair [L]	2.31
COG3773	Cell wall hydrolase CwlJ, involved in spore germination	Cell cycle control, cell division, chromosome partitioning [D]	1.54
COG4227	Antirestriction protein ArdC	Replication, recombination and repair [L]	1.54
COG0305	Replicative DNA helicase	Replication, recombination and repair [L]	0.77
COG1066	DNA repair protein RadA/Sms, contains AAA+ ATPase domain	Replication, recombination and repair [L]	0.77

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	86.92 %
Unclassified	root	N/A	13.08 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	84.62 %
Unclassified	root	N/A	13.08 %
Viruses	superkingdom	All Organisms → Viruses	2.31 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	84.62 %
Unclassified	root	N/A	13.08 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.31 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	60.00 %
Unclassified	root	N/A	13.08 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.31 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.31 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	30.77 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	28.46 %
Unclassified	root	N/A	13.08 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.31 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.31 %

Name	Rank	Taxonomy	Distribution
Acidiferrobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales	30.77 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	28.46 %
Unclassified	root	N/A	13.08 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	2.31 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.31 %

Name	Rank	Taxonomy	Distribution
Acidiferrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae	30.77 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	28.46 %
Unclassified	root	N/A	13.08 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.31 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.31 %

Name	Rank	Taxonomy	Distribution
Acidiferrobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter	30.77 %
unclassified Rhodospirillaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae	28.46 %
Unclassified	root	N/A	13.08 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.31 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.31 %

Name	Rank	Taxonomy	Distribution
unclassified Acidiferrobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter → unclassified Acidiferrobacter	30.77 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	28.46 %
Unclassified	root	N/A	13.08 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.31 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.31 %

Name	Rank	Taxonomy	Distribution
Acidiferrobacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter → unclassified Acidiferrobacter → Acidiferrobacter sp.	30.77 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	28.46 %
Unclassified	root	N/A	13.08 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.31 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.31 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000116\|DelMOSpr2010_c10057681	All Organisms → cellular organisms → Bacteria	1652	Open in IMG/M
3300000116\|DelMOSpr2010_c10155321	Not Available	778	Open in IMG/M
3300000116\|DelMOSpr2010_c10212619	Not Available	612	Open in IMG/M
3300001450\|JGI24006J15134_10017064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	3407	Open in IMG/M
3300001450\|JGI24006J15134_10049399	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1729	Open in IMG/M
3300001450\|JGI24006J15134_10191384	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter → unclassified Acidiferrobacter → Acidiferrobacter sp.	632	Open in IMG/M
3300001460\|JGI24003J15210_10010735	All Organisms → cellular organisms → Bacteria	3702	Open in IMG/M
3300001460\|JGI24003J15210_10014016	All Organisms → cellular organisms → Bacteria	3170	Open in IMG/M
3300001460\|JGI24003J15210_10032515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1889	Open in IMG/M
3300001472\|JGI24004J15324_10037533	All Organisms → Viruses → Predicted Viral	1521	Open in IMG/M
3300001472\|JGI24004J15324_10060261	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1093	Open in IMG/M
3300001472\|JGI24004J15324_10105968	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter → unclassified Acidiferrobacter → Acidiferrobacter sp.	713	Open in IMG/M
3300001718\|JGI24523J20078_1019102	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	849	Open in IMG/M
3300001720\|JGI24513J20088_1013879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	950	Open in IMG/M
3300002482\|JGI25127J35165_1007754	All Organisms → cellular organisms → Bacteria	2783	Open in IMG/M
3300002482\|JGI25127J35165_1009457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	2493	Open in IMG/M
3300002482\|JGI25127J35165_1027257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter → unclassified Acidiferrobacter → Acidiferrobacter sp.	1330	Open in IMG/M
3300002482\|JGI25127J35165_1051870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	887	Open in IMG/M
3300004448\|Ga0065861_1003893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1540	Open in IMG/M
3300004448\|Ga0065861_1019209	Not Available	707	Open in IMG/M
3300004457\|Ga0066224_1012102	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter → unclassified Acidiferrobacter → Acidiferrobacter sp.	930	Open in IMG/M
3300004457\|Ga0066224_1012136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1616	Open in IMG/M
3300004460\|Ga0066222_1038373	Not Available	513	Open in IMG/M
3300004461\|Ga0066223_1005288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1399	Open in IMG/M
3300004461\|Ga0066223_1052509	Not Available	631	Open in IMG/M
3300005086\|Ga0072334_11043559	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter → unclassified Acidiferrobacter → Acidiferrobacter sp.	500	Open in IMG/M
3300006026\|Ga0075478_10004009	All Organisms → cellular organisms → Bacteria	5241	Open in IMG/M
3300006026\|Ga0075478_10013063	All Organisms → cellular organisms → Bacteria	2826	Open in IMG/M
3300006026\|Ga0075478_10232350	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter → unclassified Acidiferrobacter → Acidiferrobacter sp.	557	Open in IMG/M
3300006027\|Ga0075462_10049863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1331	Open in IMG/M
3300006027\|Ga0075462_10221752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter → unclassified Acidiferrobacter → Acidiferrobacter sp.	565	Open in IMG/M
3300006029\|Ga0075466_1043118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1357	Open in IMG/M
3300006735\|Ga0098038_1011456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	3469	Open in IMG/M
3300006735\|Ga0098038_1290097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter → unclassified Acidiferrobacter → Acidiferrobacter sp.	510	Open in IMG/M
3300006752\|Ga0098048_1025552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1946	Open in IMG/M
3300006802\|Ga0070749_10039885	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	2890	Open in IMG/M
3300006810\|Ga0070754_10128439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter → unclassified Acidiferrobacter → Acidiferrobacter sp.	1228	Open in IMG/M
3300006810\|Ga0070754_10132145	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1207	Open in IMG/M
3300006868\|Ga0075481_10333063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter → unclassified Acidiferrobacter → Acidiferrobacter sp.	526	Open in IMG/M
3300006919\|Ga0070746_10275703	Not Available	779	Open in IMG/M
3300006929\|Ga0098036_1150678	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter → unclassified Acidiferrobacter → Acidiferrobacter sp.	711	Open in IMG/M
3300007229\|Ga0075468_10058696	All Organisms → cellular organisms → Bacteria	1289	Open in IMG/M
3300007345\|Ga0070752_1177525	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter → unclassified Acidiferrobacter → Acidiferrobacter sp.	861	Open in IMG/M
3300007346\|Ga0070753_1230996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter → unclassified Acidiferrobacter → Acidiferrobacter sp.	676	Open in IMG/M
3300007539\|Ga0099849_1037091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	2067	Open in IMG/M
3300008012\|Ga0075480_10423774	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter → unclassified Acidiferrobacter → Acidiferrobacter sp.	652	Open in IMG/M
3300008012\|Ga0075480_10517544	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter → unclassified Acidiferrobacter → Acidiferrobacter sp.	573	Open in IMG/M
3300009172\|Ga0114995_10225771	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1037	Open in IMG/M
3300009422\|Ga0114998_10221876	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter → unclassified Acidiferrobacter → Acidiferrobacter sp.	895	Open in IMG/M
3300009422\|Ga0114998_10335381	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	707	Open in IMG/M
3300009422\|Ga0114998_10527676	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter → unclassified Acidiferrobacter → Acidiferrobacter sp.	554	Open in IMG/M
3300009422\|Ga0114998_10623454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter → unclassified Acidiferrobacter → Acidiferrobacter sp.	508	Open in IMG/M
3300009512\|Ga0115003_10512625	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter → unclassified Acidiferrobacter → Acidiferrobacter sp.	702	Open in IMG/M
3300009603\|Ga0114911_1157468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	635	Open in IMG/M
3300009705\|Ga0115000_10100941	Not Available	1942	Open in IMG/M
3300009785\|Ga0115001_10166090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1436	Open in IMG/M
3300009785\|Ga0115001_10441727	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	808	Open in IMG/M
3300010368\|Ga0129324_10261602	Not Available	688	Open in IMG/M
3300011118\|Ga0114922_11084190	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter → unclassified Acidiferrobacter → Acidiferrobacter sp.	649	Open in IMG/M
3300017708\|Ga0181369_1038366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter → unclassified Acidiferrobacter → Acidiferrobacter sp.	1105	Open in IMG/M
3300017709\|Ga0181387_1015224	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter → unclassified Acidiferrobacter → Acidiferrobacter sp.	1487	Open in IMG/M
3300017710\|Ga0181403_1009103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	2145	Open in IMG/M
3300017713\|Ga0181391_1033197	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1252	Open in IMG/M
3300017713\|Ga0181391_1131865	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter → unclassified Acidiferrobacter → Acidiferrobacter sp.	557	Open in IMG/M
3300017719\|Ga0181390_1037843	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter → unclassified Acidiferrobacter → Acidiferrobacter sp.	1473	Open in IMG/M
3300017720\|Ga0181383_1122351	Not Available	698	Open in IMG/M
3300017725\|Ga0181398_1030373	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1329	Open in IMG/M
3300017735\|Ga0181431_1013709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1917	Open in IMG/M
3300017735\|Ga0181431_1117407	Not Available	594	Open in IMG/M
3300017735\|Ga0181431_1155087	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter → unclassified Acidiferrobacter → Acidiferrobacter sp.	508	Open in IMG/M
3300017755\|Ga0181411_1040137	All Organisms → cellular organisms → Bacteria	1464	Open in IMG/M
3300017759\|Ga0181414_1090647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter → unclassified Acidiferrobacter → Acidiferrobacter sp.	807	Open in IMG/M
3300017763\|Ga0181410_1023137	All Organisms → cellular organisms → Bacteria	2034	Open in IMG/M
3300017764\|Ga0181385_1085295	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter → unclassified Acidiferrobacter → Acidiferrobacter sp.	970	Open in IMG/M
3300017765\|Ga0181413_1057974	All Organisms → cellular organisms → Bacteria	1196	Open in IMG/M
3300017765\|Ga0181413_1258231	Not Available	512	Open in IMG/M
3300017769\|Ga0187221_1221081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter → unclassified Acidiferrobacter → Acidiferrobacter sp.	542	Open in IMG/M
3300017782\|Ga0181380_1013571	All Organisms → cellular organisms → Bacteria	3097	Open in IMG/M
3300017783\|Ga0181379_1008279	All Organisms → cellular organisms → Bacteria	4416	Open in IMG/M
3300017783\|Ga0181379_1215330	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	670	Open in IMG/M
3300017786\|Ga0181424_10181025	Not Available	898	Open in IMG/M
3300017786\|Ga0181424_10298045	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter → unclassified Acidiferrobacter → Acidiferrobacter sp.	669	Open in IMG/M
3300021335\|Ga0213867_1032727	All Organisms → cellular organisms → Bacteria	2056	Open in IMG/M
3300022071\|Ga0212028_1001162	All Organisms → cellular organisms → Bacteria	2707	Open in IMG/M
3300022071\|Ga0212028_1005981	All Organisms → cellular organisms → Bacteria	1767	Open in IMG/M
3300022187\|Ga0196899_1009076	All Organisms → cellular organisms → Bacteria	4013	Open in IMG/M
3300022187\|Ga0196899_1011096	All Organisms → cellular organisms → Bacteria	3550	Open in IMG/M
3300022187\|Ga0196899_1044532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1485	Open in IMG/M
3300025048\|Ga0207905_1001122	All Organisms → cellular organisms → Bacteria → Proteobacteria	5844	Open in IMG/M
3300025048\|Ga0207905_1004109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	2829	Open in IMG/M
3300025070\|Ga0208667_1013604	All Organisms → cellular organisms → Bacteria	1763	Open in IMG/M
3300025071\|Ga0207896_1004306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter → unclassified Acidiferrobacter → Acidiferrobacter sp.	2629	Open in IMG/M
3300025120\|Ga0209535_1013200	All Organisms → cellular organisms → Bacteria	4512	Open in IMG/M
3300025120\|Ga0209535_1085279	All Organisms → cellular organisms → Bacteria	1181	Open in IMG/M
3300025127\|Ga0209348_1000655	Not Available	17621	Open in IMG/M
3300025127\|Ga0209348_1007176	All Organisms → cellular organisms → Bacteria	4653	Open in IMG/M
3300025127\|Ga0209348_1012490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	3344	Open in IMG/M
3300025127\|Ga0209348_1029718	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1970	Open in IMG/M
3300025127\|Ga0209348_1031165	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter → unclassified Acidiferrobacter → Acidiferrobacter sp.	1912	Open in IMG/M
3300025132\|Ga0209232_1017545	All Organisms → cellular organisms → Bacteria	2847	Open in IMG/M
3300025137\|Ga0209336_10030567	All Organisms → cellular organisms → Bacteria	1811	Open in IMG/M
3300025137\|Ga0209336_10116293	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter → unclassified Acidiferrobacter → Acidiferrobacter sp.	738	Open in IMG/M
3300025138\|Ga0209634_1043014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2286	Open in IMG/M
3300025138\|Ga0209634_1059583	All Organisms → cellular organisms → Bacteria	1843	Open in IMG/M
3300025138\|Ga0209634_1167324	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter → unclassified Acidiferrobacter → Acidiferrobacter sp.	877	Open in IMG/M
3300025138\|Ga0209634_1289608	Not Available	569	Open in IMG/M
3300025168\|Ga0209337_1018809	All Organisms → cellular organisms → Bacteria	4079	Open in IMG/M
3300025168\|Ga0209337_1154612	All Organisms → cellular organisms → Bacteria	988	Open in IMG/M
3300025168\|Ga0209337_1241516	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter → unclassified Acidiferrobacter → Acidiferrobacter sp.	699	Open in IMG/M
3300025168\|Ga0209337_1314169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	558	Open in IMG/M
3300025508\|Ga0208148_1035803	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter → unclassified Acidiferrobacter → Acidiferrobacter sp.	1306	Open in IMG/M
3300025610\|Ga0208149_1154481	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter → unclassified Acidiferrobacter → Acidiferrobacter sp.	522	Open in IMG/M
3300025645\|Ga0208643_1115701	Not Available	717	Open in IMG/M
3300025652\|Ga0208134_1053410	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter → unclassified Acidiferrobacter → Acidiferrobacter sp.	1270	Open in IMG/M
3300025853\|Ga0208645_1031916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	2725	Open in IMG/M
3300025853\|Ga0208645_1157437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	856	Open in IMG/M
3300027687\|Ga0209710_1014889	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	4253	Open in IMG/M
3300027687\|Ga0209710_1070356	All Organisms → cellular organisms → Bacteria	1487	Open in IMG/M
3300027687\|Ga0209710_1296966	Not Available	502	Open in IMG/M
3300027791\|Ga0209830_10048043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2278	Open in IMG/M
3300027791\|Ga0209830_10077597	All Organisms → cellular organisms → Bacteria	1690	Open in IMG/M
3300028125\|Ga0256368_1066483	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter → unclassified Acidiferrobacter → Acidiferrobacter sp.	621	Open in IMG/M
3300029448\|Ga0183755_1011780	All Organisms → Viruses → Predicted Viral	3362	Open in IMG/M
3300029448\|Ga0183755_1019059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	2329	Open in IMG/M
3300029787\|Ga0183757_1006007	All Organisms → cellular organisms → Bacteria	3949	Open in IMG/M
3300031621\|Ga0302114_10062120	All Organisms → Viruses → Predicted Viral	1807	Open in IMG/M
3300031622\|Ga0302126_10230254	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter → unclassified Acidiferrobacter → Acidiferrobacter sp.	648	Open in IMG/M
3300031626\|Ga0302121_10003396	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	6722	Open in IMG/M
3300032373\|Ga0316204_10779001	Not Available	688	Open in IMG/M
3300033742\|Ga0314858_142328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter → unclassified Acidiferrobacter → Acidiferrobacter sp.	615	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	99.23%
Unclassified	Environmental → Aquatic → Unclassified	0.77%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	46.92%
Coastal	Environmental → Aquatic → Marine → Coastal	30.77%
Strait	Environmental → Aquatic → Marine → Strait	16.92%
Unclassified	Environmental → Aquatic → Marine → Unclassified	2.31%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	2.31%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified	0.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	46.15%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	30.00%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	16.92%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	2.31%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	2.31%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	0.77%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	0.77%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified → Unclassified	0.77%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	45.38%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	21.54%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	16.92%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	5.38%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	2.31%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	2.31%
Sea-Ice Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine	1.54%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	0.77%
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	0.77%
Microbial Mat	Environmental → Aquatic → Marine → Coastal → Sediment → Microbial Mat	0.77%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	0.77%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.77%
Water	Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Water	0.77%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000116	Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010	Environmental	Open in IMG/M
3300001450	Marine viral communities from the Pacific Ocean - LP-53	Environmental	Open in IMG/M
3300001460	Marine viral communities from the Pacific Ocean - LP-28	Environmental	Open in IMG/M
3300001472	Marine viral communities from the Pacific Ocean - LP-32	Environmental	Open in IMG/M
3300001718	Marine viral communities from the Pacific Ocean - LP-48	Environmental	Open in IMG/M
3300001720	Marine viral communities from the Pacific Ocean - LP-36	Environmental	Open in IMG/M
3300002482	Marine viral communities from the Pacific Ocean - ETNP_2_30	Environmental	Open in IMG/M
3300004448	Marine viral communities from Newfoundland, Canada BC-1	Environmental	Open in IMG/M
3300004457	Marine viral communities from Newfoundland, Canada MC-1	Environmental	Open in IMG/M
3300004460	Marine viral communities from Newfoundland, Canada BC-1	Environmental	Open in IMG/M
3300004461	Marine viral communities from Newfoundland, Canada BC-2	Environmental	Open in IMG/M
3300005086	Microbial Community from Halfdan Field MHDA3	Environmental	Open in IMG/M
3300006026	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA	Environmental	Open in IMG/M
3300006027	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA	Environmental	Open in IMG/M
3300006029	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNA	Environmental	Open in IMG/M
3300006735	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG	Environmental	Open in IMG/M
3300006752	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006810	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01	Environmental	Open in IMG/M
3300006868	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA	Environmental	Open in IMG/M
3300006919	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21	Environmental	Open in IMG/M
3300006929	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG	Environmental	Open in IMG/M
3300007229	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNA	Environmental	Open in IMG/M
3300007345	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30	Environmental	Open in IMG/M
3300007346	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31	Environmental	Open in IMG/M
3300007539	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG	Environmental	Open in IMG/M
3300008012	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNA	Environmental	Open in IMG/M
3300009172	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154	Environmental	Open in IMG/M
3300009422	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138	Environmental	Open in IMG/M
3300009512	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88	Environmental	Open in IMG/M
3300009603	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_904	Environmental	Open in IMG/M
3300009705	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128	Environmental	Open in IMG/M
3300009785	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130	Environmental	Open in IMG/M
3300010368	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNA	Environmental	Open in IMG/M
3300011118	Deep subsurface microbial communities from Aarhus Bay to uncover new lineages of life (NeLLi) - Aarhus_00045 metaG	Environmental	Open in IMG/M
3300017708	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_04 viral metaG	Environmental	Open in IMG/M
3300017709	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 10 SPOT_SRF_2010-04-27	Environmental	Open in IMG/M
3300017710	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 26 SPOT_SRF_2011-09-28	Environmental	Open in IMG/M
3300017713	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 14 SPOT_SRF_2010-08-11	Environmental	Open in IMG/M
3300017719	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21	Environmental	Open in IMG/M
3300017720	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23	Environmental	Open in IMG/M
3300017725	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 21 SPOT_SRF_2011-04-29	Environmental	Open in IMG/M
3300017735	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 54 SPOT_SRF_2014-05-21	Environmental	Open in IMG/M
3300017755	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 34 SPOT_SRF_2012-07-09	Environmental	Open in IMG/M
3300017759	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 37 SPOT_SRF_2012-11-28	Environmental	Open in IMG/M
3300017763	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 33 SPOT_SRF_2012-06-20	Environmental	Open in IMG/M
3300017764	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11	Environmental	Open in IMG/M
3300017765	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 36 SPOT_SRF_2012-09-28	Environmental	Open in IMG/M
3300017769	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22 (version 2)	Environmental	Open in IMG/M
3300017782	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 3 SPOT_SRF_2009-08-19	Environmental	Open in IMG/M
3300017783	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 2 SPOT_SRF_2009-07-10	Environmental	Open in IMG/M
3300017786	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 47 SPOT_SRF_2013-09-18	Environmental	Open in IMG/M
3300021335	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO540	Environmental	Open in IMG/M
3300022071	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v2)	Environmental	Open in IMG/M
3300022187	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v3)	Environmental	Open in IMG/M
3300025048	Marine viral communities from the Subarctic Pacific Ocean - LP-49 (SPAdes)	Environmental	Open in IMG/M
3300025070	Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025071	Marine viral communities from the Pacific Ocean - LP-36 (SPAdes)	Environmental	Open in IMG/M
3300025120	Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)	Environmental	Open in IMG/M
3300025127	Marine viral communities from the Pacific Ocean - ETNP_2_30 (SPAdes)	Environmental	Open in IMG/M
3300025132	Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes)	Environmental	Open in IMG/M
3300025137	Marine viral communities from the Pacific Ocean - LP-32 (SPAdes)	Environmental	Open in IMG/M
3300025138	Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)	Environmental	Open in IMG/M
3300025168	Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)	Environmental	Open in IMG/M
3300025508	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025610	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025645	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (SPAdes)	Environmental	Open in IMG/M
3300025652	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (SPAdes)	Environmental	Open in IMG/M
3300025853	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (SPAdes)	Environmental	Open in IMG/M
3300027687	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138 (SPAdes)	Environmental	Open in IMG/M
3300027791	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130 (SPAdes)	Environmental	Open in IMG/M
3300028125	Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - SB	Environmental	Open in IMG/M
3300029448	Marine viral communities collected during Tara Oceans survey from station TARA_023 - TARA_E500000082	Environmental	Open in IMG/M
3300029787	Marine viral communities collected during Tara Oceans survey from station TARA_018 - TARA_A100000172	Environmental	Open in IMG/M
3300031621	Marine microbial communities from Western Arctic Ocean, Canada - AG5_Surface	Environmental	Open in IMG/M
3300031622	Marine microbial communities from Western Arctic Ocean, Canada - CB4_20m	Environmental	Open in IMG/M
3300031626	Marine microbial communities from Western Arctic Ocean, Canada - CB21_surface	Environmental	Open in IMG/M
3300032373	Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 6-month pyrrhotite 2	Environmental	Open in IMG/M
3300033742	Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - 2018 seawater	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSpr2010_100576813	3300000116	Marine	MQSQLIDDILKHLDEFEKTGDWFHFSLALDALDDLKREIES*
DelMOSpr2010_101553214	3300000116	Marine	MQGQLIDEVLQHLDEFEKTGDWYHFSLALDALDDLKKQIESI*
DelMOSpr2010_102126191	3300000116	Marine	MQRQLIDDILQHLDEFEKTGDWYHFSLALDALDDLKKQIESI*
JGI24006J15134_100170642	3300001450	Marine	MQSELIDEVLRHLDKFEKTGDWFHFSLALDALDDLKREIES*
JGI24006J15134_100493995	3300001450	Marine	MQSELIDEVLRHLDKFEKTGDWFHFSLALDALDDLKKQIESI*
JGI24006J15134_101913842	3300001450	Marine	MQRELIDDILRHLDKFENTGDWYHFSLALDALDDLKREIENQ*
JGI24003J15210_100107357	3300001460	Marine	MQSELINDIVQYLESFEKTGDWFHFSLALDALDDLKREIENQ*
JGI24003J15210_100140163	3300001460	Marine	MQRQLINDIVQHLESFERTGDWYHFSLALDALEDLKREIENQ*
JGI24003J15210_100325152	3300001460	Marine	MQRELIEDILKYLDKFEKTGDWFHFSLALDALDDLKKQIESI*
JGI24004J15324_100375332	3300001472	Marine	MQSELINEVLQCLDKFEKTGDWYHFSLALDALDDLKREIENH*
JGI24004J15324_100602613	3300001472	Marine	MQSQLIDDILQHLDKFENTGDWFHFSLALDALDDLKKQIESI*
JGI24004J15324_101059682	3300001472	Marine	MQSELIDEVLRHLDKFEKTGDWFHFSLALXALDDLKREIES*
JGI24523J20078_10191021	3300001718	Marine	MQSELIDEVLRHLDKFEKTGDWFHFSLALDALDDLKREIE
JGI24513J20088_10138791	3300001720	Marine	MQGQLIDDILRHLDKFEKTGDWFHFSLALDALDDLKKQIESI*
JGI25127J35165_10077545	3300002482	Marine	MESQLIDDILKHLNEFEKTGDWFHFSLALDALDDLKKQIESNNNEK*
JGI25127J35165_10094573	3300002482	Marine	MESQLIEDVLRYLDEFEKTGDWYHFSLALDALDDLKNKIENN*
JGI25127J35165_10272574	3300002482	Marine	MESQLIDDVLRYLDEFEKTGDWYHFSLALDALDDLKNEIENN*
JGI25127J35165_10518703	3300002482	Marine	MQSQLIDDVLRYLDQFEKTGDWFHFSLALDALDDLKNEIESNNNE*
Ga0065861_10038932	3300004448	Marine	MQSELIDEVLRHLDKFENTGDWFHFSLALDALDDLKKQIESI*
Ga0065861_10192091	3300004448	Marine	ECIKMQRELIEDILKYLDKFEKTGDWFHFSLALDALDDLKRAIENE*
Ga0066224_10121022	3300004457	Marine	MQRELIEDILKYLDKFEKTGDWFHFSLALDALDDLKRAIENE*
Ga0066224_10121364	3300004457	Marine	MQRELIDDILQHLDKFEKTGDWFHFSLALDALDDLKKQIESI*
Ga0066222_10383731	3300004460	Marine	MQSELINEVLQCLDKFEKTGDWFHFSLALDALDDLKRAIENE*
Ga0066223_10052882	3300004461	Marine	MQSQLISDIVQYLESFERTGDWFHFSLALDALDDLKREIENQ*
Ga0066223_10525091	3300004461	Marine	MQRQLINDIVQYLESFERTGDWFHFSLALDALDDLKREIENQ*
Ga0072334_110435592	3300005086	Water	MQSQLIDDILKHLDEFEKTGDWFHFSLALDALDDLKKEIESIIK*
Ga0075478_100040097	3300006026	Aqueous	MQSQLIDDILQHLDKFEKTGDWFHFSLALDALDDLKKQIESNNNE*
Ga0075478_100130634	3300006026	Aqueous	MQSELINEVLQCLDKFEKTGDWFHFSLALNALDDLKRAIENE*
Ga0075478_102323502	3300006026	Aqueous	MESQLIDDILSHLDQFEKTGDWFHFSLALDALDDLKKQIKSNNNE*
Ga0075462_100498632	3300006027	Aqueous	MESQLIDDILSHLDKFEKTGDWFHFSLALDALDDLKKQIESNNNE*
Ga0075462_102217522	3300006027	Aqueous	MQGQLIDEVLQHLDKFENTGDWYHFSLALDALDDLKREIENQ*
Ga0075466_10431182	3300006029	Aqueous	MESQLINDIVQYLESFERTGDWFHFSLALDALDDLKREIENQ*
Ga0098038_10114567	3300006735	Marine	MENQLIDDILRHLNEFEKTGDWFYFSLALDALDDLKKEIENN*
Ga0098038_12900972	3300006735	Marine	MESQLIDDILSHLDEFEKTGDWFHFSLALDALDDLKKEIENN*
Ga0098048_10255524	3300006752	Marine	MQSELINEVLQCLDKFEKTGDWFHFSLALDALDDLKRAIENA*
Ga0070749_100398857	3300006802	Aqueous	MESQLIDDILSHLDKFEKTGDWFYFSLALDALDDLKKQIKSNNNE*
Ga0070754_101284392	3300006810	Aqueous	MQNQLIDDILSHLDKFEKTGDWFHFSLALDALDDLKKEIENN*
Ga0070754_101321452	3300006810	Aqueous	MESELIEDILKHLDEFEKTGDWFHFSLALDALDDLKREIENQ*
Ga0075481_103330632	3300006868	Aqueous	MESQLIDDILSHLDKFEKTGDWFYFSLALDALDDLKNEIESNNNG*
Ga0070746_102757031	3300006919	Aqueous	ISLMESQLIDDILSHLDQFEKTGDWFQFSLALDALDDLRKEIENN*
Ga0098036_11506783	3300006929	Marine	MESQLIDDILSHLDEFEKTGDWFHFSLALDALDDLKIKIESNNNE*
Ga0075468_100586963	3300007229	Aqueous	MESQLINEVLQCLDKFEKTGDWFHFSLALDALDDLKRAIENE*
Ga0070752_11775254	3300007345	Aqueous	MQSQLIDDILSHLDQFEKTGDWFHFSLALDALDDLKKQIKSNNNE*
Ga0070753_12309962	3300007346	Aqueous	MESELIEDILQHLDEFEKTGDWFHFSLALDALDDLKREIENQ*
Ga0099849_10370917	3300007539	Aqueous	MQSELIDEVLRHLDKFENTGDWFHFSLALDALDDLKREIENQ*
Ga0075480_104237743	3300008012	Aqueous	MQRQLIDDILQQLDEFEKTGDWFHFSLALDALDDLKREIES*
Ga0075480_105175442	3300008012	Aqueous	MESQLIDDILSHLDNFEKTGDWFHVSLALDALDDLKREIENQ*
Ga0114995_102257712	3300009172	Marine	MQSELIDEVLRHLDKFEKTGDWFHFSLALDALDDLKRKIENA*
Ga0114998_102218762	3300009422	Marine	MQSQLIDEVLQHLDKFENTGDWYHFSLALDALDDLKREIENQ*
Ga0114998_103353812	3300009422	Marine	MQGELIEDILKYLDKFEKTGDWFHFSLALDALDDLKREIENQ*
Ga0114998_105276761	3300009422	Marine	MQSELIDEVLRHLDKFENTGDWFHFSLALDALDDLKREIES*
Ga0114998_106234542	3300009422	Marine	MQKQLINEVLQCLDKFEKTGDWFHFSLALDALDDLKREIENA*
Ga0115003_105126253	3300009512	Marine	MQSELIDEVLRHLDKFEKTGDWFHFSLALDALDDLKKQIES*
Ga0114911_11574682	3300009603	Deep Ocean	MESQLIDDILSHLDKFEKTGDWFHFSLALDALDDLKNEIESI*
Ga0115000_101009418	3300009705	Marine	MQSQLIDEVLQHLDKFENTGDWYHFSLALDALDDLKKQIESI*
Ga0115001_101660904	3300009785	Marine	MQRQLINDILSHLNKFEKTGDWFHFSLALDALDDLKREIAS*
Ga0115001_104417272	3300009785	Marine	MQKQLINEVLQCLDKFEKTGDWFHFSLALDALDDLKKQI
Ga0129324_102616023	3300010368	Freshwater To Marine Saline Gradient	MQRQLIDDILKHLDKFEKTGDWFHFSLALDALDDLKKQIKSNNNE*
Ga0114922_110841902	3300011118	Deep Subsurface	MQRELIEDILQHLDEFEKTGDWFHFSLALDALDDLKREIENQ*
Ga0181369_10383665	3300017708	Marine	MESELIDDILKHLDEFEKTGDWFHFSLALDALDDLKTKIESI
Ga0181387_10152242	3300017709	Seawater	MQSQLINDIAQYLESFERTGDWFHFSLALDALDDLKREIENQ
Ga0181403_10091036	3300017710	Seawater	MQRQLINDIVQYLESFERTGDWFHFSLALDALDDLKREIENQ
Ga0181391_10331974	3300017713	Seawater	MQGELIEDILKYLDKFEKTGDWYHFSLALDALDDLKREIENH
Ga0181391_11318652	3300017713	Seawater	MQRQLIDDILQHLDKFEKTGDWFHFSLALDALDDLKKQIESNNNE
Ga0181390_10378436	3300017719	Seawater	MESELIEDILQHLDKFENTGDWYHFSLALDALDDLKKQIESI
Ga0181383_11223512	3300017720	Seawater	MESELIEDILQHLDKFEKTGDWFHFSLALDALDDLKKQIESI
Ga0181398_10303732	3300017725	Seawater	MQSELIDEVLQHLDEFEKTGDWYHFSLALDALDDLKRKIENQ
Ga0181431_10137093	3300017735	Seawater	MQRQLIEDILQHLDEFEKTGDWFHFSLALDALDDLKREIES
Ga0181431_11174071	3300017735	Seawater	SELIEDILQHLDKFEKTGDWFHFSLALDALDDLKKQIESI
Ga0181431_11550872	3300017735	Seawater	MDSELIEDILQHLDKFEKTGDWFHFSLALDALDDLKKQIESI
Ga0181411_10401372	3300017755	Seawater	MQSQLIDDILQHLDEFEKTGDWFHFSLALDALDDLKKQIESI
Ga0181414_10906473	3300017759	Seawater	MKSQLIDDILSHLDKFEKTGDWFHFSLALDALDDLRKEIESI
Ga0181410_10231374	3300017763	Seawater	MESELIEDILQHLDKFENTGDWFHFSLALDALDDLKKQIESNNNE
Ga0181385_10852952	3300017764	Seawater	MESQLIDDILQHLDKFEKTGDWFHFSLALDALDDLKKQIESI
Ga0181413_10579742	3300017765	Seawater	MESELIEDILQHLDKFENTGDWFHFSLALDTLDDLKKQIESNNNE
Ga0181413_12582312	3300017765	Seawater	IDDILQHLDKFENTGDWYHFSLALDALDDLKREFENQ
Ga0187221_12210812	3300017769	Seawater	MQSQLIDDILRHLDQFEKTGDWFHFSLALDALDDLKKQIESI
Ga0181380_10135713	3300017782	Seawater	MESELIEDILQHLDKFENTGDWYHFSLALDALDDLKKQIESNNNE
Ga0181379_10082795	3300017783	Seawater	MQSQLIDDILRHLDQFEKTGDWFHFSLALDALDDLKIEIENQ
Ga0181379_12153302	3300017783	Seawater	MESELIEDILQHLDKCEKTGDWFNFSLALDALDDLKREIENH
Ga0181424_101810251	3300017786	Seawater	QRQLIEDILQHLDKFEKTGDWFHFSLALDALDDLKREIENQ
Ga0181424_102980452	3300017786	Seawater	MQSELINEVLQCLDKFEKTGDWYHFSLALDALDDLKKAIENA
Ga0213867_10327273	3300021335	Seawater	MQRQLIDDILKHLDKFEKTGDWFHFSLALDALDDLKKQIESIIK
Ga0212028_10011625	3300022071	Aqueous	MQSQLIDDILQHLDEFEKTGDWFHFSLALDALDDLKKQIESNNNE
Ga0212028_10059812	3300022071	Aqueous	MQSELINEVLQCLDKFEKTGDWFHFSLALNALDDLKRAIENE
Ga0196899_10090767	3300022187	Aqueous	MQSQLIDDILQHLDKFEKTGDWFHFSLALDALDDLKKQIESNNNE
Ga0196899_10110964	3300022187	Aqueous	MQGQLIDEVLQHLDKFENTGDWYHFSLALDALDDLKREIENQ
Ga0196899_10445324	3300022187	Aqueous	MESQLIDDILSHLDQFEKTGDWFHFSLALDALDDLKKQIKSNNNE
Ga0207905_100112214	3300025048	Marine	MQSELIDEVLRHLDKFEKTGDWFHFSLALDALDDLKREIES
Ga0207905_10041098	3300025048	Marine	MQRELIEDILKYLDKFEKTGDWFHFSLALDALDDLKKQIESI
Ga0208667_10136042	3300025070	Marine	MQSELINEVLQCLDKFEKTGDWFHFSLALDALDDLKRAIENA
Ga0207896_10043062	3300025071	Marine	MQSELIDEVLRHLDKFEKTGDWFHFSLALDALDDLKKQIESI
Ga0209535_10132008	3300025120	Marine	MQSELINDIVQYLESFEKTGDWFHFSLALDALDDLKREIENQ
Ga0209535_10852792	3300025120	Marine	MQSELIEDILKYLDKFEKTGDWFHFSLALDALDDLKRKIENQ
Ga0209348_10006554	3300025127	Marine	MESQLIDDILSHLDEFEKTGDWFHFSLALDALDDLKKQIESIIK
Ga0209348_10071766	3300025127	Marine	MESQLIDDILKHLNEFEKTGDWFHFSLALDALDDLKKQIESNNNEK
Ga0209348_10124904	3300025127	Marine	MESQLIDDILSHLDEFEKTGDWFHFSLALDALDDLRKEIESIIK
Ga0209348_10297182	3300025127	Marine	MESQLIEDVLRYLDEFEKTGDWYHFSLALDALDDLKNKIENN
Ga0209348_10311652	3300025127	Marine	MESQLIDDVLRYLDEFEKTGDWYHFSLALDALDDLKNEIENN
Ga0209232_10175457	3300025132	Marine	MESQLIDDILSHLDKFEKTGDWFHFSLALDALDDLKNKIESI
Ga0209336_100305672	3300025137	Marine	MQSELINEVLQCLDKFEKTGDWYHFSLALDALDDLKREIENH
Ga0209336_101162933	3300025137	Marine	MQSQLIDDILQHLDKFENTGDWFHFSLALDALDDLKKQIESI
Ga0209634_10430142	3300025138	Marine	VFTKMQSELIDEVLRHLDKFEKTGDWFHFSLALDALDDLKREIES
Ga0209634_10595834	3300025138	Marine	MQGQLIDDILRHLDKFEKTGDWFHFSLALDALDDLKKQIESI
Ga0209634_11673242	3300025138	Marine	MQSQLISDIVQYLESFERTGDWFHFSLALDALDDLKREIENQ
Ga0209634_12896081	3300025138	Marine	MQRELIEDILQYLESFERTGDWFHFSLALDALDDLKREFENQ
Ga0209337_10188095	3300025168	Marine	MQSELINDIVQHLESFERTGDWFHFSLALDALDDLKSEIENQ
Ga0209337_11546121	3300025168	Marine	MQGELIEDILKYLDKFEKTGDWFHFSLALDALDDLKKQIESI
Ga0209337_12415161	3300025168	Marine	MQRELIDDILRHLDKFENTGDWYHFSLALDALDDLKREIENQ
Ga0209337_13141692	3300025168	Marine	MQRELIEDILKYLDKFEKTGDWFHFSLALDALDDL
Ga0208148_10358032	3300025508	Aqueous	MQSELINEVLQCLDKFEKTGDWFHFSLALDALDDLKRAIENE
Ga0208149_11544812	3300025610	Aqueous	MESQLIDDILSHLDKFEKTGDWFYFSLALDALDDLKKQIKSNNNE
Ga0208643_11157013	3300025645	Aqueous	DDILQHLDKFEKTGDWFHFSLALDALDDLKRAIENE
Ga0208134_10534102	3300025652	Aqueous	MESQLINEVLQCLDKFEKTGDWFHFSLALDALDDLKRAIENE
Ga0208645_10319166	3300025853	Aqueous	MESQLIDDILSHLDKFEKTGDWFYFSLALDALDDLKNEIESNNNG
Ga0208645_11574372	3300025853	Aqueous	MESELIEDILKHLDEFEKTGDWFHFSLALDALDDLKREIENQ
Ga0209710_10148893	3300027687	Marine	MQSELIDEVLRHLDKFEKTGDWFHFSLALDALDDLKRKIENA
Ga0209710_10703562	3300027687	Marine	MQSQLIDEVLQHLDKFENTGDWYHFSLALDALDDLKREIENQ
Ga0209710_12969663	3300027687	Marine	MQRELIDDILQHLDKFEKTGDWFHFSLALDALDDLKKQIESI
Ga0209830_100480431	3300027791	Marine	MQGELIEDILKYLDKFEKTGDWFHFSLALDALDDL
Ga0209830_100775974	3300027791	Marine	MQSELIDEVLRHLDKFENTGDWFHFSLALDALDDLKREIES
Ga0256368_10664832	3300028125	Sea-Ice Brine	MQRELIEDILKHLDEFENTGDWFHFSLALDALDDLKKQIESINE
Ga0183755_10117807	3300029448	Marine	MESQLIDDILSHLDKFEKTGDWFHFSLALDALDDLKNEIESI
Ga0183755_10190593	3300029448	Marine	MESQLIDDILQHLDEFEKTGDWFHFSLALDALDDLKNEIES
Ga0183757_10060075	3300029787	Marine	MESQLIDDILQHLDEFEKTGDWFHFSLALDALDDLKREIENQ
Ga0302114_100621202	3300031621	Marine	MQSELIDEVLRHLDKFEKTGDWFHFSLALDALDDLKKQIES
Ga0302126_102302542	3300031622	Marine	MQSELIEDILKYLDKFEKTGDWFHFSLALDALDDLKKQIESIIK
Ga0302121_100033967	3300031626	Marine	MQSELIEDILKYLDKFEKTGDWFHFSLALDALDDLKREIENQ
Ga0316204_107790013	3300032373	Microbial Mat	MQSELIDEVLRHLDKFENTGDWFHFSLALDALDDLKREIENQ
Ga0314858_142328_153_281	3300033742	Sea-Ice Brine	MQSELINDIVQHLESFERTGDWFHFSLALDALDDLKRKIENQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F063169

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences