NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F062947

Metagenome / Metatranscriptome Family F062947

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F062947
Family Type Metagenome / Metatranscriptome
Number of Sequences 130
Average Sequence Length 80 residues
Representative Sequence MAAMADLLLRRAPAASGEVYDVLRGRKIVGRIMLSNGSAASQWVWTISYHYHEDRTPTHGYEPTRDAAMKAFFRSWHRE
Number of Associated Samples 108
Number of Associated Scaffolds 130

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 21.54 %
% of genes near scaffold ends (potentially truncated) 40.00 %
% of genes from short scaffolds (< 2000 bps) 97.69 %
Associated GOLD sequencing projects 101
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (93.077 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(36.154 % of family members)
Environment Ontology (ENVO) Unclassified
(43.077 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(38.462 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.
1F62_03321990
2JGI12032J12867_10035282
3JGI12053J15887_100171782
4Ga0066823_100128223
5Ga0070690_1014890531
6Ga0070682_1017301151
7Ga0070687_1008464212
8Ga0070668_1017476182
9Ga0070669_1006594063
10Ga0070674_1003028141
11Ga0070667_1004237961
12Ga0070662_1007959281
13Ga0070672_1004544672
14Ga0070664_1003440742
15Ga0068858_1020053811
16Ga0075365_105667491
17Ga0070712_1015372282
18Ga0074055_117028522
19Ga0074048_129630681
20Ga0074062_128141782
21Ga0068865_1014975181
22Ga0074063_101119142
23Ga0099795_101316713
24Ga0105245_120645562
25Ga0099792_101556493
26Ga0099792_112720582
27Ga0105243_116736051
28Ga0105242_125894821
29Ga0105237_122559841
30Ga0105249_117558111
31Ga0105249_119804242
32Ga0099796_102643441
33Ga0134128_105647402
34Ga0134127_128465111
35Ga0134127_130373511
36Ga0134122_121091801
37Ga0150985_1183075002
38Ga0150984_1047574791
39Ga0137398_107339952
40Ga0137397_112622402
41Ga0137413_100466472
42Ga0137413_116331551
43Ga0137419_110327791
44Ga0162652_1000368752
45Ga0164300_101562602
46Ga0164298_116770901
47Ga0164303_110388302
48Ga0164303_113306621
49Ga0164301_113871951
50Ga0164302_106582632
51Ga0164308_101946081
52Ga0164308_106907252
53Ga0164304_110186801
54Ga0164306_120102121
55Ga0164305_103942482
56Ga0157378_118442702
57Ga0157378_122066561
58Ga0163162_120280061
59Ga0173480_101485653
60Ga0163161_104020822
61Ga0163161_105212632
62Ga0184605_102003182
63Ga0184619_104135711
64Ga0184611_12574551
65Ga0184618_103067402
66Ga0184628_105732062
67Ga0190274_138014661
68Ga0193723_11144901
69Ga0193693_10643132
70Ga0193693_10696651
71Ga0193731_10917334
72Ga0193730_11470494
73Ga0193730_11662732
74Ga0222622_101410813
75Ga0222622_104482933
76Ga0207642_103900091
77Ga0207645_107704882
78Ga0207659_109667951
79Ga0207690_110387792
80Ga0207706_102814802
81Ga0207706_105779751
82Ga0207669_100777273
83Ga0207704_115660762
84Ga0207712_114221691
85Ga0207712_115001491
86Ga0207668_111604992
87Ga0207639_120289542
88Ga0208997_10100231
89Ga0208984_11110481
90Ga0208988_10417832
91Ga0268266_103936072
92Ga0247822_114286571
93Ga0307321_10244031
94Ga0307295_100792472
95Ga0307295_101590641
96Ga0307311_101668942
97Ga0307298_100245622
98Ga0307317_101210011
99Ga0307317_103490582
100Ga0307315_101565011
101Ga0307319_101546321
102Ga0307320_103989572
103Ga0307282_103690991
104Ga0307282_104346041
105Ga0307323_103514011
106Ga0307287_100494001
107Ga0307284_101411962
108Ga0307305_102457942
109Ga0307292_100896531
110Ga0307292_103748711
111Ga0307296_101623033
112Ga0307296_103893552
113Ga0307296_106809611
114Ga0307300_102082422
115Ga0308187_103259902
116Ga0307500_100798722
117Ga0307500_101239112
118Ga0307500_101674392
119Ga0307497_103230301
120Ga0307497_104235981
121Ga0170824_1223076761
122Ga0170820_163444133
123Ga0170818_1001255411
124Ga0307468_1003020701
125Ga0310907_103267312
126Ga0310904_113307452
127Ga0307472_1010207052
128Ga0310896_106172061
129Ga0247830_113063181
130Ga0364929_0321540_233_472
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 26.58%    β-sheet: 24.05%    Coil/Unstructured: 49.37%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

10203040506070MAAMADLLLRRAPAASGEVYDVLRGRKIVGRIMLSNGSAASQWVWTISYHYHEDRTPTHGYEPTRDAAMKAFFRSWHRESequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
93.1%6.9%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Groundwater Sediment
Groundwater Sediment
Soil
Soil
Vadose Zone Soil
Terrestrial Soil
Grass Soil
Forest Soil
Hardwood Forest Soil
Soil
Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Sediment
Soil
Avena Fatua Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Populus Endosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Avena Fatua Rhizosphere
3.8%36.2%3.8%6.9%3.1%3.8%3.8%3.1%3.8%3.8%3.8%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
F62_033219902170459010Grass SoilMPAMAELLLKRATAASDEVYDVLSGSRIVGRIWLSDASPASQWVWTVSYGYHEGRTPTHGYAESREAAMQASATGWHRE
JGI12032J12867_100352823300000912Forest SoilMPAMAELLLKRATAASGEVYDVLSGSRIVGRILLSDASPASQWVWTVSYGYHEGRTPTHGYAESREAAMQAFAKGWHRE*
JGI12053J15887_1001717823300001661Forest SoilMPAMAELLLKRATAASGEVYDVLSGSRIVGRILLSDASPASQWVWTVSYGYHEGRTPTYGYAESREAAMQAFAKGWHRE*
Ga0066823_1001282233300005163SoilMAAMADLLLRRAPAASGEVYDVLRGRKIVGRIMLSNGSAASQWVWTISYHYHEDRTPTHGYEPSRD
Ga0070690_10148905313300005330Switchgrass RhizosphereMAAMVELLLRRAPAASGEVYDVLRGRTIVGWIMLSIGSAASQWVWTISYHHHEDRTPTHGYEPTRDAAMKAFFRSWHRE*
Ga0070682_10173011513300005337Corn RhizosphereSALASAAPRRMMPAMADLLLRRAPAAPGEVYDVLSGSRIVGRILLSNESAASQWVWTLSYDYHEDRTPTHGYAATRDAALHAFARSWNRET*
Ga0070687_10084642123300005343Switchgrass RhizosphereMPAMAELLLKRATAASVEVYAVEAELSRILLSDASPASQWVWTVSYGYHEGRTPTRGYAESREAAMQAFAK
Ga0070668_10174761823300005347Switchgrass RhizosphereMAAMVDLLLRRAPAASGEAYDVRRGTRIVGRIMLSNGSAASQWVWTLSYHYHKDRTPTHGCEPTRDAAMKAFFRSWHRE*
Ga0070669_10065940633300005353Switchgrass RhizosphereMMPAMADLLLRRAPAAPGEVYDVLSGSRIVGRILLSDASAASQWVWTLSYDYHEDRTPTHGYAATRDAALQAFARSWNRET*
Ga0070674_10030281413300005356Miscanthus RhizosphereMSAMADLLLRRAPAAPGEVYDVLSGSRIVGRILLSNTSAASQWVWTLSYDYHEDRTPTHGYAATRDAALHAFARSWNRET*
Ga0070667_10042379613300005367Switchgrass RhizosphereMAAMVELLLRRAPAASGEVYDVLRGRKIVGRIMLSNGSAASQWVWTISYHYHEDRTPTHGYEPTRDAAMKAFFRSWHRE*
Ga0070662_10079592813300005457Corn RhizosphereRTMAAMVDLLLRRAPAASGEVYDVLRGRKIVGRIMLSNGSAASQWVWTISFHYHEDRTPTHGYELSRDAAMKAFFRSWHRE*
Ga0070672_10045446723300005543Miscanthus RhizosphereMAAMVDLLLRRAPAASGEVYDVLRGRKIVGRIMLSNGSATSQWVWTISYHYHEDRTPTHGYEPTRDAAMKAFFRSWHRE*
Ga0070664_10034407423300005564Corn RhizosphereMPAMADLLLRRAPAAPGEVYDVLSGSRIVGRILLSNESAASQWVWTLSYDYHEDRSPTHGYAATRDAALHAFARSWNRET*
Ga0068858_10200538113300005842Switchgrass RhizosphereMPAMEDLLLRRAPAAPGEVYDILSGSRIVGRILLSNAPAASQWVWTLSYDYHEDRTPTHGNAATRDAALH
Ga0075365_1056674913300006038Populus EndospherePLAALATAAPRRMMSAMADLLLRRAPAAPGEVYDVLSGSRIVGRILLSNTSAASQWVWTLSYDYHEDRTPTHGYAATRDAALHAFARSWNRET*
Ga0070712_10153722823300006175Corn, Switchgrass And Miscanthus RhizosphereMAAMVDLLLRRAPAASGEVYDVLRGRKIVGRIMLSNGSAASQWVWTISYHYHEDRTPTHGYEPSRDAAMKAFSRSWHRE*
Ga0074055_1170285223300006573SoilMAAMVDLLLRRAPAASGEVYDVLRGRTIVGRIMLSNGSAASQWVWTISYHYHEDRTPTHGYEPSRDAAMKAFFRS
Ga0074048_1296306813300006581SoilMPAMADLLLRRAPAAPGEVYDVLSGSRIVGRILLSDASAASQWVWTLSYDYHEDRTPTHGYAATRDAALHAFARSWNMIRPTSSPWL
Ga0074062_1281417823300006606SoilMAAMADLLLRRAPAASGEVYDVLRGRKIVGRIMLSNGSAASQWVWTISYHYHEDRTPTHGYEPARDAAMKAFFRSWHRE*
Ga0068865_10149751813300006881Miscanthus RhizosphereMAAMADLLLRRAPAASGEVYDVLRGRKIVGRIMLSNGSAASQWVWTISYHYHEDRTPTHGYEPSRDAAMKAFSRSWHRE*
Ga0074063_1011191423300006953SoilMAAMADLLLRRAPAASGEVYDVLRGRKIVGRIMLSNGSAASQWVWTISYHYHEDRTPTHGYEPTRDAAMKAFFRSWHRE*
Ga0099795_1013167133300007788Vadose Zone SoilMVVLAASSRDHTMAAMADLLLRRAPAAPGEVYDVLRGRRIVGRIMLSNGSAASQWVWTMSYHYHEDRTPTHGYEPTRDAAMKAFAKSWHRE*
Ga0105245_1206455623300009098Miscanthus RhizosphereMAAMVDLLLRRAPAASGEVYDVLRGRKIVGRIMLSNGSAASQWVWTISYHHHEDRTPTHGYEPTRDAAMKAFFRSWHRE*
Ga0099792_1015564933300009143Vadose Zone SoilMLAMAELLLKRATAASGEVYDVLSGSRIVGRILLSDASPASQWVWTVSYGYHEGRTPTHGYAESREAAMQAFAKGWHRE*
Ga0099792_1127205823300009143Vadose Zone SoilMVVLAASSRDRTMAAMADLLLRRAPAASGEVYDVLRGRTIVGRIMLSNGSAASQWVWTMSYHYHEDRTPTHGYEPTRDAAMKAFAKSWHRE*
Ga0105243_1167360513300009148Miscanthus RhizosphereMMPAMEDLLLRRAPAAPGEVYDILSGSRIVGRILLSNESAASQWVWTLSYDYHEDRSPTHGYAATRDAALHAFARSWNRET*
Ga0105242_1258948213300009176Miscanthus RhizosphereMAAMVDLLLRRAPAASGEVYDVLRGRKIVGRIMLSNGSAASQWVWTVSYHYHEDRTPTHGYEPTREAAMLAFAKSWHRET*
Ga0105237_1225598413300009545Corn RhizosphereMMPAMEDLLLRRAPAAPGEVYDILSGSRIVGRILLSDAPAASQWVWTLSYDYHEDRSPTHGYAATRDAALHAFARSWNRET*
Ga0105249_1175581113300009553Switchgrass RhizosphereMMPAMEDLLLRRAPAAPGEVYDILSGSRIVGRILLSDPPAASQWVWTLSYDYHEDRTPTHGYAATRDAALHAFGRSWNRET*
Ga0105249_1198042423300009553Switchgrass RhizosphereMVDLLLRRAPAASGEVYDVLRGRKIVGRIMLSNGSAASQWVWTISYHYHEDRTPTHGYEPSRDAAMKAFSRSWHRE*
Ga0099796_1026434413300010159Vadose Zone SoilMADLLLRRAPAASGEVYDVLSGSRIVGRILLSDASPASQWVWTVSYGYHEGRTPIHGYAESREAAMQAFATGWHRE*
Ga0134128_1056474023300010373Terrestrial SoilMAAMVDLLLRRAPAASGEVYDVLRGRKIVGRIMLSNGSAASQWVWTISYHYHEDRTPTHGYEPTRDAAMKAFFRSWHRE*
Ga0134127_1284651113300010399Terrestrial SoilMAAMVDLLLRRAPAASGEVYDVLRGRKIVGRIMLSNGSAASQWVWTLSYHYHKDRTPTHGCEPTRDAAMKAFFRSWHRERSGRVTS
Ga0134127_1303735113300010399Terrestrial SoilMMPAMEDLLLRRAPAAPGEVYDVLSGSRIVGRILLSNESAASQWVWTLSYDYHEDRSPTHGYAATRDAALHAFARSWNRET*
Ga0134122_1210918013300010400Terrestrial SoilMAAMVDLLLRRAPAASGEVYDVLRGRKIVGRIMLSNGSAASQWVWTVSYHYHEDRTPTHGYEPTREAAMLAFAKSWHRDT*
Ga0150985_11830750023300012212Avena Fatua RhizosphereMAAMVDLLLRRAPAASGEVYDVLRGRTIVGRIMLSNGSAASEWVWTISYHYHEDRTPTHGYEPSRDAAMKAFFRSWHRE*
Ga0150984_10475747913300012469Avena Fatua RhizosphereMMPAMADLLLRRAPAAPGEVYDVLSGSRIVGRILLSDASAASQGVWTLSYDYHEDRTPTHGYAATRDAALHAFARSWNRET*
Ga0137398_1073399523300012683Vadose Zone SoilMVVLAASSRDRTMAAMADLLLRRAPAAPGEVYDVLRGRRIVGRIMLSNGSAASQWVWTMSYHYHEDRTPTHGYEPTRDAAMKAFAKSWHRE*
Ga0137397_1126224023300012685Vadose Zone SoilMADLLLRRAPAAPGEVYDVLRGRRIVGRIMLSNGSAASQWVWTMSYHYHEDRTPTHGYEPTRDAAMKAFAKSWHRE*
Ga0137413_1004664723300012924Vadose Zone SoilMPAMAELLLKRATAASGEVYDVLSGSRIVGRILLSDASPASQWVWTVSYGYHEGRTPTHGYAESREAAMQAFATGWHRE*
Ga0137413_1163315513300012924Vadose Zone SoilMVVLAASSRDRTMAAMADLLLRRAPAAPGEVYDVLRGRRIVGRIMLSNGSAASQWVWTMSYHYHEDRTPTHGYEPTRDAAMK
Ga0137419_1103277913300012925Vadose Zone SoilRRAPAAPGEVYDVLRGRRIVGRIMLSNGSAASQWVWTMSYHYHEDRTPTHGYEPTRDAAMKAFAKSWHRE*
Ga0162652_10003687523300012941SoilMVELLLKRATAASGEVYDVLSGSRIVGRILLSDASPASQWVWTVSYGHHEGRTPTHGYAEFREAAMLAFAKGWHRE*
Ga0164300_1015626023300012951SoilMAAMVDLLLRRAPAASGEVYDVLRGRKIVGRIMLSNGSAASQWVWTISYHYHEDRTPTHGYEPSRDAAMKAFFRSWHRE*
Ga0164298_1167709013300012955SoilMADLLLRRAPAAPGEVYDVLSGSRIVGRILLSDASAASQWVWTLSYDYHEDRTPTHGYAATRDAALQAFARSWN
Ga0164303_1103883023300012957SoilSGEVYDVLRGRKIVGRIMLSNGSAASQWVWTISYHYHEDRTPTHGYEPSRDAAMRAFFRSWHRE*
Ga0164303_1133066213300012957SoilMMPAMADLLLRRAPAAPGEVYDVLSGSRIVGRILLSDASAASQWVWTLSYDYHEDRTPTHGYAATRDAALHEFARSWNRET*
Ga0164301_1138719513300012960SoilSDSLAALATAAPRRIMPAIADLLLRRAPAAPGEVYDVLSGSRIVGRILLSNTSAASQWVWTLSYDYHEDRTPTHGYAATRDAALHEFARSWNRET*
Ga0164302_1065826323300012961SoilMVDLLLRRAPAASGEVYDVLRGRTIVGRIMLSNGSAASQWVWTISFHYHEDRTPTRGYEPTRDAAMKAFFRSWHRE*
Ga0164308_1019460813300012985SoilMPAMAKLLLKRATAASGEVYDVLSGSRIVGRIWLSDASPASQWVWTVSYGYHEGRTPTHGYAESREAAMQTFAKGWHRE*
Ga0164308_1069072523300012985SoilMAAMVDLLLRRAPAASGEVYDVLRGRKIVGRIMLSNGSAASQWVWTISFHYHEDRTPTHGYEPSRDAAMKAFSRSWHRE*
Ga0164304_1101868013300012986SoilMAAMVDLLLRRAPAASGEVYDVIRGRKIVGRIMLPNGSAASQWVWTISYHYHEDRTPTHGYEPTRDAAMKAFFRSWHRE*
Ga0164306_1201021213300012988SoilMAAMVDLLLRRAPAASGEVYDVLRGRKIVGRIMLPNGSAASQWVWTISYHYHEDRTPTHGYEPSRDAAMKAFFRSWHRE*
Ga0164305_1039424823300012989SoilMAAMVDLLLRRAPAASAEVYDVLGGRKIVGRIVLSNGSAASQGHWTISYRYHEDRTPTRGYEPSRDAAMKAFFRSWHRE*
Ga0157378_1184427023300013297Miscanthus RhizosphereMAAMVDLLLRRAPAATGEVYDVLRGRKIVGRIMLSNGSAASQWVWTISYHYHEDRTPTHGYEPSRDAAMKAFSRSWHRE*
Ga0157378_1220665613300013297Miscanthus RhizosphereMAAMVDLLLRRAPAAYGEDYNVLRGRTIVGWIMLSIGSAASQWVWTISYHHHEDRTPTHGYEPTRDAAMKAFFRSWHRE*
Ga0163162_1202800613300013306Switchgrass RhizosphereMAAMVELLLRRAPAASGEVYDVLRGRKIVGRIMLSNGSAASQWVWTISYHYHEDRTPTHGYEPSRDAAMKAFSRSWHRE*
Ga0173480_1014856533300015200SoilMMSAMADLLLRRAPAAPGEVYDVLSGSRIVGRILLSNESAASQWVWTLSYDYHEDRSPTHGYAATRDAALHAFARSWNRET*
Ga0163161_1040208223300017792Switchgrass RhizosphereMPAMVELLLKRATAASGEVYDVLSRSRIVGRILLSDASLASQWVWTVSYGYHEGRTPTHGYAESREAAMQTFAKGWHRE
Ga0163161_1052126323300017792Switchgrass RhizosphereMAAMVDLLLRRAPAASGEVYDVLRGRKIVGRIMLSNGSATSQWVWTISYHYHEDRTPTHGYEPSRDAAMKAFSRSWHRE
Ga0184605_1020031823300018027Groundwater SedimentMLRRAPAAPGEVYDVLSGSRIVGRILLSDASAASQWVWTVSYDFHEDRTPTHGYAATRDAALHAFARSWNRET
Ga0184619_1041357113300018061Groundwater SedimentRTMAAMADLLLRRAPAAPGEVFDVLRGRRIVGRIMLSNGSAASQWVWTMSYHYHEDRTQTHGYEPTRDAAMKAFAKSWHRE
Ga0184611_125745513300018067Groundwater SedimentMPAMAELLLKRAAAASGEVYDVLSGSRIVGRILLSDASPASQWVWTVSYGYHDGRTPTHGYAESR
Ga0184618_1030674023300018071Groundwater SedimentMAAMADLLLRRAPAAPGEVYDVLRGRRIVGRIMLSNGSAASQWVWTMSYHYHEDRTPTHGYEPTRDAAMKAFAKSWHRE
Ga0184628_1057320623300018083Groundwater SedimentMMPAMADLLLRRAPAAPGEVYDVLSGSRIVGRILLSDASAASQWVWTLSYDYHEDRTPTHGYAATRDAALQAFARSWNRET
Ga0190274_1380146613300018476SoilMADLLLRRAPAASGEVYDILSGSRIVGRILLSDASAASQWVWTLSYDYHEDRTPTHGYAATRDA
Ga0193723_111449013300019879SoilMPAMAELLLKRATAASGEVYDVLSGSRIVGRILLSDASPASQWVWTVSYGYHEGRTPTHGYAESREAAMQAFAAGWHRE
Ga0193693_106431323300019996SoilLPAMTDLLLKRATASPGEVYDVLRGRRIVGRIMLSNGSAASQWVWTMSYHYHEDRTPTHGYEPTRDAAMKAFAKSWHRE
Ga0193693_106966513300019996SoilMPAMAELLLKRATAASGEVYDVLSGSRIVGRILLSDASPASQWVWTVSYGYHEGRTPTHGYAESREAAMQAFAKGWHRE
Ga0193731_109173343300020001SoilLRRASAAPGEVYDVLSGSRIVGRILLSDASAASQWVWTLSYDYHEDRTPTHGYAATRDAALQAFARSWNRET
Ga0193730_114704943300020002SoilAAPRRMMPAMADLLLRRAPAAPGEVYDVLSGSRIVGRILLSDASAASQWVWTLSYDYHEDRTPTHGYAATRDAALQAFARSWNRET
Ga0193730_116627323300020002SoilHAPALRPQVVLAPWSPDRTMPAMAELLLKRATAASGEVYDVLSGSRIVGRILLSDASPASQWVWTVSYGYHEGRTPTHGYAESREAAMQAFAKGWHRE
Ga0222622_1014108133300022756Groundwater SedimentMRTATRFPPASTPRRAPAAPAEVYDVLRGRRIVGRIMLSNGSAASQWVWTISYHYPDDRTPTHGYEPTRDAAMKAFAKSWHRE
Ga0222622_1044829333300022756Groundwater SedimentMPAMAELLLKRATAASGEVYDVLSGSRIVGRILLSDASPASQWVWTVSYGYHEGRTPTHGYAESREAAMQAFATGWHRE
Ga0207642_1039000913300025899Miscanthus RhizosphereMPAMAELLLKRATAASVEVYDVLSGSRIVVGSCYPMRSPASQWVWTVSYGYHEGRTPTRGYAESREAAMQAFAKSCHSVTSVPPASIQ
Ga0207645_1077048823300025907Miscanthus RhizosphereMMPAMADLLLRRAPAAPGEVYDVLSGSRIVGRILLSNTSAASQWVWTLSYDYHEDRTPTHGYAATRDAALQAFARSWNRET
Ga0207659_1096679513300025926Miscanthus RhizosphereMMPAMADLLLRRAPAAPGEVYDVLSGSRIVGRILLSNESAASQWVWTLSYDYHEDRSPTHGYAATRDAALHAFARSWNRET
Ga0207690_1103877923300025932Corn RhizosphereSATPRRMMPAMADLLLRRAPAAPGEVYDVLSGSRIVGRILLSNESAASQWVWTLSYDYHEDRSPTHGYAATRDAALHAFARSWNRET
Ga0207706_1028148023300025933Corn RhizosphereMAAMVDLLLRRAPAASGEVYDVLRGRKIVGRIMLSNGSAASQWVWTISFHYHEDRTPTHGYELSRDAAMKAFFRSWHRE
Ga0207706_1057797513300025933Corn RhizosphereMPAMADLLLRRAPAAPGEVYDVLSGSRIVGRILLSNESAASQWVWTLSYDYHEDRSPTHGYAATRDAALHAFARSWNRET
Ga0207669_1007772733300025937Miscanthus RhizosphereMSAMADLLLRRAPAAPGEVYDVLSGSRIVGRILLSNESAASQWVWTLSYDYHEDRTPTHGYAATRDAALQAFARSWNRET
Ga0207704_1156607623300025938Miscanthus RhizosphereADLLLRRAPAAPGEVYDVLSGSRIVGRILLSDASAASQWVWTLSYDYHEDRTPTHGYAATRDAALQAFARSWNRET
Ga0207712_1142216913300025961Switchgrass RhizosphereMAAMVDLLLRRAPAASGEVYDVLRGRKIVGRIMLSNGSAASQWVWTISYHYHEDRTPTHGYEPTRDAAMKAFFRSWHRE
Ga0207712_1150014913300025961Switchgrass RhizosphereMAAMVDLLLRRAPAASGEAYDVRRGTRIVGRIMLSNGSAASQWVWTLSYHYHKDRTPTHGCEPTRDAAMKAFFRSWHRE
Ga0207668_1116049923300025972Switchgrass RhizosphereMSAMADLLLRRAPAAPGEVYDVLSGSRIVGRILLSDASAASQWVWTLSYDYHEDRTPTHGYAATRDAALQAFARSWNRET
Ga0207639_1202895423300026041Corn RhizosphereMPAMAELLLKRATAASVEVYDVLSGSRIVVGSCYPMRSPASQWVWTVSYGYHEGRTPTRGYAESREAAMQAFAKSCHSV
Ga0208997_101002313300027181Forest SoilAAPGEVYDVLSGSRIVGRILLSDASAASQWVWTLSYDYHEDRTPTHGYAATRDAALQAFARSWNRET
Ga0208984_111104813300027546Forest SoilMPDLLLRRAPAAPGEVYDVLSGSRIVGRILLSDASAASQWVWTLSYDYHEDRTPTHGYAATRDAALQAFARSW
Ga0208988_104178323300027633Forest SoilMMPAMPDLLLRRAPAAPGEVYDVLSGSRIVGRILLSDASAASQWVWTLSYDYHEDRTPTHGYAATRDAALQAFARSWNRET
Ga0268266_1039360723300028379Switchgrass RhizosphereMSAMADLLLRRAPAAPGEVYDVLSGSRIVGRILLSNTSAASQWVWTLSYDYHEDRTPTHGYAATRDAALHAFARSWNRET
Ga0247822_1142865713300028592SoilAPGRLVAVVTAPHNEAMADLLLRRAPAASGEVYDVLRGRKIVGRIMLSNGSAASQWVWTISYHYHEDRTPTHAYEPTRDAAMKAFFRSWHRE
Ga0307321_102440313300028704SoilMPAMAELLLKRATAASGEVYDVLSGSRIVGRILLSDASPASQWVWTVSYGYHEGRTPTHGYAESREARDAGIRDGLAQR
Ga0307295_1007924723300028708SoilMAAMVDLLLRRAPAASGEVYDVLRGRKIVGRIMLSNGSAASQWVWTISYHYHEDRTPTHGYEPSRDAAMKAFSRSWHRE
Ga0307295_1015906413300028708SoilMPAMVELLLKRATAASGEVYDVLSGSRIVGRILLSDASPASQWVWTVSYGHHEGHTPTHGYAEFREAAMLAFAKGWHRE
Ga0307311_1016689423300028716SoilMMPAMADLLLRRAPAAPGEVYDVLSGSRIVGRILLSDASAASQWVWTLSYDYHEDRTPTHGYAATRDAALHAFARSWNRET
Ga0307298_1002456223300028717SoilMAAMVDLLLRRAPAAFGEVDDVLRGRKIVGRIMLSNGSAASQWVWTMSYHYHEDRTQTHGYEPTRDAAMKAFSLSWHRE
Ga0307317_1012100113300028720SoilLRPCAVLAPSSPRRTMAAMVDLLLRRAPAAFGEVDDVLRGRKIVGRIMLSNGSAASQWVWTMSYHYHEDRTQTHGYEPTRDAAMKAFSLSWHRE
Ga0307317_1034905823300028720SoilMAAMADLLLRRAPAAPGEVYDVLSGSRIVGRILLSDASAASQWVWTLSYDYHEDRTPTHGYAATRDAALQAFARSWNRET
Ga0307315_1015650113300028721SoilMPAMAELLLKRATAASGEVYDVLSGSRIVGRIWLSDASPASQWVWTVSYGYHEGRTPTHGYAESREAAMQAFAKGWHRE
Ga0307319_1015463213300028722SoilAASGEVYDVLSGSRIVGRILLSDASLASQWVWTVSYGYHEGRTPTHGYAESREAAMQAFAKGWHRE
Ga0307320_1039895723300028771SoilTAPHMAAMADLLLRRAPAASCEVYDVLRGRKIVGRIMLSNGSAASQWVWTMSYHYHEDRTQTHGYEPTRDAAMKAFSLSWHRE
Ga0307282_1036909913300028784SoilMMPAMADLLLRRAPAAPGEVYDVLSGSRIVGRILLSDASAASQWVWTLSYDYHEDRTPTHGYAATRDAALHEFARSWNRET
Ga0307282_1043460413300028784SoilPALRPQVVLAPWSPDRTMPAMVELLLKRATAASGEVYDVLSGSRIVGRILLSDASPASQWVWTVSYGHHEGHTPTHGYAEFREAAMLAFAKGWHRE
Ga0307323_1035140113300028787SoilMAELLLRRAIAARGEVYDVLRGRRIVGRIMLSNGSSASQWVWTISYKYHEDRTPTHGYAASRAAAMQAFAKSW
Ga0307287_1004940013300028796SoilLAPWSPDRTMPAMVELLLKRATAASGEVYDVLSGSRIVGRILLSDASPASQWVWTVSYGHHEGRTPTHGYAEFREAAMLAFAKGWHRE
Ga0307284_1014119623300028799SoilSPDRTMPAMAELLLKRATAASGEVYDVLSGSRIVGRILLSDASPASQWVWTVSYGYHEGRTPTHGYAESREAAMQAFATGWHRE
Ga0307305_1024579423300028807SoilAPSSPRRTMAAMVDLLLRRAPAAFGEVDDVLRGRKIVGRIMLSNGSAASQWVWTMSYHYHEDRTPTHGYEPTRDAAMKAFSLSWHRE
Ga0307292_1008965313300028811SoilMPAMAELLLKRATAASGEVYDVLSGSRIVGRILLSDASPASQWVWTVSYGYHEGRTPTHGYAESREAAMQAFA
Ga0307292_1037487113300028811SoilSPRRTMAAMVNLLLRRAPAASGEVYDVLRGRKIVGRIMLSNGSAASQWVWTISFHYHEDRTPTHGYEPSRDAAMKAFSRSWHRE
Ga0307296_1016230333300028819SoilALATAAPRRMMPAMADLLLRRAPAAPGEVYDVLSGSRIVGRILLSDASAASQWVWTLSYDYHEDRTPTHGYAATRDAALHEFARSWNRET
Ga0307296_1038935523300028819SoilLKRATAASGEVYDVLSGSRIVGRILLSDASPASQWVWTVSYGYHEGRTPTHGYAESREAAMQAFAKGWHRE
Ga0307296_1068096113300028819SoilMPAMVELLLKRATAASGEVYDVLSGSRIVGRILLSDASPASQWVWTVSYGHHEGRTPTHGYAEFREAAMLAFAKGWHRE
Ga0307300_1020824223300028880SoilMAAMVDLLLRRAPAASGEAYDVRRGTRIVGRIMLSNGSAASQWVWTLSYHYHEDRTPTHGYEPTRDAAMKAFFRSWHRK
Ga0308187_1032599023300031114SoilMVDLLLRRAPAPSGEVYDVLSGSRIVGRILLSDASPASQWVWTVSYGYHEGRTPTHGYAESREAAMQAFAKGWHRE
Ga0307500_1007987223300031198SoilMMPAMEDLLLRRAPAAPGEVYDILSGSRIVGRILLSDAPAASQWVWTLSYDYHEDRTPTHGNAATRDAALHAFGAGT
Ga0307500_1012391123300031198SoilAPRRMMPAMADLLLRRAPAAPGEVYDVLSGSRIVGRILLSDASAASQWVWTLSYDYHEDRTPTHGYAATRDAALQAFARSWNRET
Ga0307500_1016743923300031198SoilLRRAPAASGEVYDVLRGRKIVGRIMLSNGSAASQWVWTISYHYHEDRTPTHGYEPTRDAAMKAFFRSWHRE
Ga0307497_1032303013300031226SoilLATAAPRRMMPAMADLLLRRAPAAPGEVYDVLSGSRIVGRILLSDASAASQWVWTLSYDYHEDRTPTHGYAATRDAALHEFARSWNRET
Ga0307497_1042359813300031226SoilPRRTMAAMVDLLLRRAPAASGEVYDVLRGRKIVGRIMLSNGSAASQWVWTVSYHYHEDRTPTHGYASTRDAAMKAFSRSWHRE
Ga0170824_12230767613300031231Forest SoilMAAMVDLLLRRAPAASGEVYDVLQGRKIVGRIMLSNGSAASQWVWTISYHYHEDRTPTHGYEPSRDAAMKAFFRSWHRE
Ga0170820_1634441333300031446Forest SoilMAAMVDLLLRRVPAASGEVYDVLRGRKIVGRIMLSNGSAASQWVWTISYHYHEDRTPTHGYEPTRDAAMKAFFRSWHRE
Ga0170818_10012554113300031474Forest SoilPSSPRRTMAAMVDLLLRRSPAASGEVYDVLRGRTIVGRIMLSNGSAASQWVWTLSYHYHEDRTPTHGYEPSRDATMKAFSRSWHQE
Ga0307468_10030207013300031740Hardwood Forest SoilMAAMADLLLRRAPAASGEVCDVLRGRTIVGRIMLSNGSAASQWVWTVSYHYHEDRTPTHGYASTRDAAMKAFSRSWHRE
Ga0310907_1032673123300031847SoilAPAAPCEVYDVLSGSRIVGRILLSDASAASQWVWTLSYDYHEDRTPTHGYAATRDAALQAFARSWNRET
Ga0310904_1133074523300031854SoilASGEVYDFLSGSRIVGRVWLSDASPASQWVWTVSYGYHEGRTPTHGYAESREAAMQTFAKGWHRE
Ga0307472_10102070523300032205Hardwood Forest SoilMAAMVDLLLRRAPAASGEVYDVLRGRKIVGRIMLSNGSAASQWVWTISFHYHEDRTPTHGYEPSRDAAMKAFFRSWHRE
Ga0310896_1061720613300032211SoilELLLKRATAASGEVYDVLSGSRIVGRILLSDASPASQWVWTVSYGYHEGRTPTRGYAESREAAMQAFAKSCHRE
Ga0247830_1130631813300033551SoilMADLLLRRAPAAPGEVYDVLSGSRIVGRILLSDASAASQWVWTLSYDYHEDRTPTHGYAATRDAALQAFARSWNRET
Ga0364929_0321540_233_4723300034149SedimentMAAMVDLLLRRAPAASGEVYDVLRGRTIVGWIMLSIGSAASQWVWTISYHYHEDRTPTHGYEPSRDAAMKAFSRSWHRE


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.