Metagenome / Metatranscriptome Family F062930

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F062930
Family Type	Metagenome / Metatranscriptome
Number of Sequences	130
Average Sequence Length	101 residues
Representative Sequence	SPCTPAPATGCLIDNNLATNGAGGGKSGYSFAATPQTGAGSPVPNEFYTTGTPISAQTGTKAYCAFDDGVVRTQPAGTITLVASYGACQALLPMAN
Number of Associated Samples	98
Number of Associated Scaffolds	130

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.78 %
% of genes near scaffold ends (potentially truncated)	96.92 %
% of genes from short scaffolds (< 2000 bps)	81.54 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (93.846 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (19.231 % of family members)
Environment Ontology (ENVO)	Unclassified (37.692 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (73.846 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 10.48% β-sheet: 20.16% Coil/Unstructured: 69.35%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 130 Family Scaffolds
PF07963	N_methyl	29.23
PF13544	Obsolete Pfam Family	12.31
PF13633	Obsolete Pfam Family	3.08
PF00005	ABC_tran	3.08
PF12679	ABC2_membrane_2	2.31
PF12704	MacB_PCD	2.31
PF04773	FecR	1.54
PF14378	PAP2_3	1.54
PF00072	Response_reg	0.77
PF02371	Transposase_20	0.77
PF07221	GlcNAc_2-epim	0.77
PF01740	STAS	0.77
PF13751	DDE_Tnp_1_6	0.77
PF12969	DUF3857	0.77

COG ID	Name	Functional Category	% Frequency in 130 Family Scaffolds
COG2942	Mannose or cellobiose epimerase, N-acyl-D-glucosamine 2-epimerase family	Carbohydrate transport and metabolism [G]	0.77
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.77

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.85 %
Unclassified	root	N/A	6.15 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.85 %
Unclassified	root	N/A	6.15 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.85 %
Unclassified	root	N/A	6.15 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	90.00 %
Unclassified	root	N/A	6.15 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.77 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	71.54 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	13.85 %
Unclassified	root	N/A	6.15 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.77 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	71.54 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	13.85 %
Unclassified	root	N/A	6.15 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.77 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	71.54 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	13.85 %
Unclassified	root	N/A	6.15 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.77 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	71.54 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	10.77 %
Unclassified	root	N/A	6.15 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.77 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	0.77 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	71.54 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	8.46 %
Unclassified	root	N/A	6.15 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.77 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.77 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	71.54 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	8.46 %
Unclassified	root	N/A	6.15 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.77 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.77 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	71.54 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	8.46 %
Unclassified	root	N/A	6.15 %
Streptomyces sp. CNY228	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. CNY228	0.77 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.77 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001166\|JGI12694J13545_1002143	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2469	Open in IMG/M
3300001356\|JGI12269J14319_10183111	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	846	Open in IMG/M
3300001356\|JGI12269J14319_10203254	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	777	Open in IMG/M
3300001356\|JGI12269J14319_10302382	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	576	Open in IMG/M
3300001546\|JGI12659J15293_10057765	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	874	Open in IMG/M
3300001593\|JGI12635J15846_10010088	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7989	Open in IMG/M
3300002245\|JGIcombinedJ26739_100918788	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	758	Open in IMG/M
3300002245\|JGIcombinedJ26739_100996334	Not Available	722	Open in IMG/M
3300003219\|JGI26341J46601_10015137	All Organisms → cellular organisms → Bacteria → Acidobacteria	2532	Open in IMG/M
3300004080\|Ga0062385_10816676	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	612	Open in IMG/M
3300004080\|Ga0062385_10964033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. CNY228	570	Open in IMG/M
3300004082\|Ga0062384_100042572	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2143	Open in IMG/M
3300004082\|Ga0062384_101085354	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	577	Open in IMG/M
3300004091\|Ga0062387_100216861	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1169	Open in IMG/M
3300004091\|Ga0062387_101388608	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300004092\|Ga0062389_101764916	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	799	Open in IMG/M
3300004121\|Ga0058882_1819816	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	611	Open in IMG/M
3300004635\|Ga0062388_100590616	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1015	Open in IMG/M
3300005176\|Ga0066679_10367563	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	941	Open in IMG/M
3300005591\|Ga0070761_10016287	All Organisms → cellular organisms → Bacteria	4127	Open in IMG/M
3300005591\|Ga0070761_10064845	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2067	Open in IMG/M
3300005610\|Ga0070763_10004805	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	5167	Open in IMG/M
3300005610\|Ga0070763_10208643	All Organisms → cellular organisms → Bacteria	1044	Open in IMG/M
3300005610\|Ga0070763_10259335	All Organisms → cellular organisms → Bacteria	945	Open in IMG/M
3300005610\|Ga0070763_10889251	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300005921\|Ga0070766_10664175	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	704	Open in IMG/M
3300005921\|Ga0070766_11275508	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300006176\|Ga0070765_100467031	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1183	Open in IMG/M
3300006176\|Ga0070765_100740356	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	929	Open in IMG/M
3300009143\|Ga0099792_10388092	All Organisms → cellular organisms → Bacteria → Acidobacteria	851	Open in IMG/M
3300009520\|Ga0116214_1350546	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	571	Open in IMG/M
3300009552\|Ga0116138_1231168	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300009698\|Ga0116216_10152330	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1422	Open in IMG/M
3300009698\|Ga0116216_10315795	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	951	Open in IMG/M
3300009700\|Ga0116217_10083943	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2206	Open in IMG/M
3300009759\|Ga0116101_1026437	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1167	Open in IMG/M
3300010159\|Ga0099796_10386105	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	611	Open in IMG/M
3300010339\|Ga0074046_10482157	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	742	Open in IMG/M
3300012917\|Ga0137395_11237841	Not Available	520	Open in IMG/M
3300012925\|Ga0137419_10418498	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1050	Open in IMG/M
3300014168\|Ga0181534_10053676	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1986	Open in IMG/M
3300014201\|Ga0181537_10534078	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	802	Open in IMG/M
3300014657\|Ga0181522_10198503	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1180	Open in IMG/M
3300014658\|Ga0181519_10162960	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1417	Open in IMG/M
3300015241\|Ga0137418_10489868	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	985	Open in IMG/M
3300017940\|Ga0187853_10414968	Not Available	594	Open in IMG/M
3300017948\|Ga0187847_10015119	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4930	Open in IMG/M
3300017975\|Ga0187782_10236912	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1370	Open in IMG/M
3300018009\|Ga0187884_10165704	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	924	Open in IMG/M
3300018038\|Ga0187855_10235703	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1075	Open in IMG/M
3300018044\|Ga0187890_10709064	Not Available	568	Open in IMG/M
3300018047\|Ga0187859_10045548	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2335	Open in IMG/M
3300018057\|Ga0187858_10736394	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587	Open in IMG/M
3300018058\|Ga0187766_11258076	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300018085\|Ga0187772_10083398	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2030	Open in IMG/M
3300018085\|Ga0187772_10486459	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	869	Open in IMG/M
3300018086\|Ga0187769_10895642	Not Available	671	Open in IMG/M
3300018088\|Ga0187771_10648200	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	896	Open in IMG/M
3300018088\|Ga0187771_11936502	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300018090\|Ga0187770_10053810	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2905	Open in IMG/M
3300018090\|Ga0187770_10461472	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1002	Open in IMG/M
3300018090\|Ga0187770_10766742	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	771	Open in IMG/M
3300020582\|Ga0210395_11338851	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300021046\|Ga0215015_10931847	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1013	Open in IMG/M
3300021180\|Ga0210396_10056819	All Organisms → cellular organisms → Bacteria → Acidobacteria	3577	Open in IMG/M
3300021181\|Ga0210388_10029926	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4463	Open in IMG/M
3300021401\|Ga0210393_10332843	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1235	Open in IMG/M
3300021402\|Ga0210385_10006498	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7030	Open in IMG/M
3300021402\|Ga0210385_10011078	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5509	Open in IMG/M
3300021402\|Ga0210385_10300579	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1189	Open in IMG/M
3300021404\|Ga0210389_11287458	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300021405\|Ga0210387_10772219	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	850	Open in IMG/M
3300021406\|Ga0210386_10311813	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1349	Open in IMG/M
3300021420\|Ga0210394_10979419	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	733	Open in IMG/M
3300021420\|Ga0210394_11400629	Not Available	594	Open in IMG/M
3300021433\|Ga0210391_10368531	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1127	Open in IMG/M
3300021433\|Ga0210391_10449170	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1012	Open in IMG/M
3300021474\|Ga0210390_10718994	Not Available	831	Open in IMG/M
3300021474\|Ga0210390_11558411	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300021477\|Ga0210398_10286085	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1344	Open in IMG/M
3300021477\|Ga0210398_10498594	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	991	Open in IMG/M
3300021477\|Ga0210398_10811944	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	753	Open in IMG/M
3300021479\|Ga0210410_11188031	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	654	Open in IMG/M
3300022505\|Ga0242647_1042920	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300022522\|Ga0242659_1108695	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300022708\|Ga0242670_1065184	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300022713\|Ga0242677_1087744	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300023030\|Ga0224561_1002430	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1284	Open in IMG/M
3300025404\|Ga0208936_1007093	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1346	Open in IMG/M
3300025414\|Ga0208935_1012273	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1163	Open in IMG/M
3300027521\|Ga0209524_1095691	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	623	Open in IMG/M
3300027603\|Ga0209331_1055059	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1002	Open in IMG/M
3300027783\|Ga0209448_10143623	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	797	Open in IMG/M
3300027795\|Ga0209139_10063622	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1293	Open in IMG/M
3300027824\|Ga0209040_10280020	All Organisms → cellular organisms → Bacteria → Acidobacteria	822	Open in IMG/M
3300027829\|Ga0209773_10302878	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	667	Open in IMG/M
3300027855\|Ga0209693_10076427	All Organisms → cellular organisms → Bacteria → Acidobacteria	1652	Open in IMG/M
3300027855\|Ga0209693_10230121	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	910	Open in IMG/M
3300027869\|Ga0209579_10432978	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	713	Open in IMG/M
3300027884\|Ga0209275_10105107	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1450	Open in IMG/M
3300027895\|Ga0209624_10006534	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7708	Open in IMG/M
3300027895\|Ga0209624_10157138	All Organisms → cellular organisms → Bacteria → Acidobacteria	1503	Open in IMG/M
3300028047\|Ga0209526_10389479	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	927	Open in IMG/M
3300028873\|Ga0302197_10328502	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	685	Open in IMG/M
3300028882\|Ga0302154_10403006	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	659	Open in IMG/M
3300028906\|Ga0308309_10109819	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2152	Open in IMG/M
3300028906\|Ga0308309_11421922	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	594	Open in IMG/M
3300029908\|Ga0311341_10817538	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300029917\|Ga0311326_10152990	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1238	Open in IMG/M
3300029918\|Ga0302143_1104972	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	666	Open in IMG/M
3300029939\|Ga0311328_10302669	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1183	Open in IMG/M
3300029955\|Ga0311342_10626644	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	865	Open in IMG/M
3300030007\|Ga0311338_10052606	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5409	Open in IMG/M
3300030494\|Ga0310037_10418422	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	553	Open in IMG/M
3300030597\|Ga0210286_1321804	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300031234\|Ga0302325_12559347	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	607	Open in IMG/M
3300031261\|Ga0302140_10453938	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1011	Open in IMG/M
3300031525\|Ga0302326_13095181	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	565	Open in IMG/M
3300031708\|Ga0310686_104042048	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	10818	Open in IMG/M
3300031708\|Ga0310686_105425696	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	87601	Open in IMG/M
3300031708\|Ga0310686_113612266	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1022	Open in IMG/M
3300031708\|Ga0310686_117064040	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300031715\|Ga0307476_10000582	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	26842	Open in IMG/M
3300031715\|Ga0307476_10783079	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	705	Open in IMG/M
3300031823\|Ga0307478_10415274	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1116	Open in IMG/M
3300031823\|Ga0307478_11230767	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	623	Open in IMG/M
3300032160\|Ga0311301_11823923	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	722	Open in IMG/M
3300033755\|Ga0371489_0066512	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2278	Open in IMG/M
3300034124\|Ga0370483_0178050	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	720	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.46%
Aquatic	Environmental → Aquatic	21.54%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	69.23%
Freshwater	Environmental → Aquatic → Freshwater	21.54%
Peat	Environmental → Terrestrial → Peat	9.23%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	39.23%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	21.54%
Loam	Environmental → Terrestrial → Soil → Loam	20.77%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.23%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	9.23%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	22.31%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	20.77%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	18.46%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.15%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.23%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	9.23%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.08%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	19.23%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	11.54%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	10.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	9.23%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	7.69%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	6.92%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	6.15%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	5.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.62%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.85%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.08%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	3.08%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.08%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.31%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.77%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.77%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.77%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.77%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001166	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2	Environmental	Open in IMG/M
3300001175	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004121	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF109 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009552	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009759	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022505	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022522	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022708	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022713	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023030	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU2	Environmental	Open in IMG/M
3300025404	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10 (SPAdes)	Environmental	Open in IMG/M
3300025414	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10 (SPAdes)	Environmental	Open in IMG/M
3300027521	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027603	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028873	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_1	Environmental	Open in IMG/M
3300028882	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_3	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029908	II_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029917	I_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029918	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_1	Environmental	Open in IMG/M
3300029939	I_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029955	II_Bog_E2 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030597	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO747-VDE046SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031261	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_1	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300033755	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB26FY SIP fraction	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12694J13545_10021431	3300001166	Forest Soil	CLIDNNLASDGTPVGSGKSGYKFAATAVTGGASPIPNEFYTTGYPITAQTGTKSFCAFDDGVVRQAATGVIAQVGGYAACQALNPLAN*
JGI12649J13570_10220111	3300001175	Forest Soil	SNGPAGGGKSGYNFTAAPATGAGSPIPNEFWTTAAPVTAQTGTRSYCAFDDGVVRQGASGVITAVGSYVACQGLNPLAN*
JGI12269J14319_101831113	3300001356	Peatlands Soil	YPTVGYATLAALGGASPCTPAPATGCLIDNNLATDGAGGGKSGYKFAATPSTGAGSPVPNQFYTTGTPISAQTGTKAFCAFDDGVVRTQPAGTITLVASYVACQGLLPMAN*
JGI12269J14319_102032541	3300001356	Peatlands Soil	PAPATGCLIDNNLATDGAGGGKSGYKFASTPSAGAGSPVPNQFYTTGTPISAQTGTKAYCAFDDGVVRTQPAGTITLVASYVACQGLLPMAN*
JGI12269J14319_103023821	3300001356	Peatlands Soil	GEIGFFAAYPTVGYATLAALGGASPCPAPATGCLIDNNLATNGAGGGKSGYNFAATPSTGAGSPVPNQFYTTGTPISAQTGTKAYCAFDDGVVRTQPAGTITLVASYVACQGLLPMAN*
JGI12659J15293_100577652	3300001546	Forest Soil	LAVLGGASPCTPLPASGCLIDNNLATNGAGGGKSGYNFAATSLAGAASPIPNEFWTTGTPISAQTGTKAYCAFDDGVVRTQPAGTIALVGGYGACQALLPMAN*
JGI12635J15846_100100881	3300001593	Forest Soil	LPASGCLIDNNLATNGAGAGKSGYSFAATPSTGANSPVPNQFYATGTPISAQTGTKAFCAFDDGVVRTQAAGTIAKVASYGACQALLPMAN*
JGIcombinedJ26739_1009187881	3300002245	Forest Soil	DNNLATNGAAGGKSGYMFAGTPSAGAGSPVPNQFYTTATPISAQTGTKAYCAFDDGVVRTQPAGNIALVGSYGACQALLPMAN*
JGIcombinedJ26739_1009963342	3300002245	Forest Soil	ALGGASPCTPAAATGCLIDNNLASDGTPVGSGKSGYKFAATAVTGGASPIPNEFYTTGYPITAQTGTKSFCAFDDGVVRQAATGVIAQVGGYAACQALNPLAN*
JGI26341J46601_100151371	3300003219	Bog Forest Soil	CTPGTGTACLIDNLLASAIAGGAGKSGYFFASTPSAGAASTVNNQFYTTAAPISAQTGTKSYCAFDDGVIRQQVAGTTTVVGGYGACQALLPIAN*
Ga0062385_108166761	3300004080	Bog Forest Soil	VGYTSLAGLGGASPCTPAPATGCLIDNNLATNGAGGGKSGYSFAATPQTGAGSPVPNEFYTTGTPISAQTGTKAYCAFDDGVVRTQPAGTITLVASYGACQALLPMAN*
Ga0062385_109640331	3300004080	Bog Forest Soil	PTIGYTSLAGLGGASPCTPAPATGCLIDNNLATNGAGGGKSGYTFAATPSTGAGSPVPNQFYTTGTPISAQTGTKAYCAFDDGVVRTQPAGTITQVASYGACQALLPMAN*
Ga0062384_1000425721	3300004082	Bog Forest Soil	CLIDNNLATNGAGGGKSGYSFASIPSSGAGSPVPNQFYTTGTPISAQTGTKAYCAFDDGVVRTQAAGTITLVASYGACQALLPMAN*
Ga0062384_1010853541	3300004082	Bog Forest Soil	SPCTPAPATGCLIDNNLATNGAGGGKSGYSFAATPQTGAGSPVPNEFYTTGTPISAQTGTKAYCAFDDGVVRTQPAGTITLVASYGACQALLPMAN*
Ga0062387_1002168612	3300004091	Bog Forest Soil	PAVATGCLIDNNLAQDGTPAGGGKSGYKFAATTAVGGGSPIPNEFWTTGTPISAQTGTKAYCAFDDGVVRTQAPGVITLVAGYAACQALNPMAN*
Ga0062387_1013886081	3300004091	Bog Forest Soil	CLIDNNLATNGAGGGKSGYTFAATPSTGAGSPVPNQFYTTGTPISAQTGTKAYCAFDDGVVRTQPAGTITQVASYGACQALLPMAN*
Ga0062389_1017649161	3300004092	Bog Forest Soil	RTIVTGEIGYFAAYPTVGYAALAALGGASPCTPGVATGCLIDNNLASNGAGGGKSGYMFASTTATGAASPIPNEFWTTGTPISVQTGTKAYCAFDDGVVRTQPAGTVTLVAGYGACQALLPMAN*
Ga0058882_18198162	3300004121	Forest Soil	VATGCLIDNNLATNGAGGGKSGYNFAALPQTGAGSPIPNEFYTTGTPISAQTGTKAYCAFDDGVVRTQPAGNIALVGGYAPCQALLPMAN*
Ga0062388_1005906162	3300004635	Bog Forest Soil	SERTIVTGEIGYFAAYPTVGYVVLATLGGASPCTPLPASGCLIDNNLASNGAGAGKSGYNFASTPSTGAGSPVPNQFYTTSTPFSAQTGTKAYCAFDDGVVRTQAPGTITLVAGYGACQALLPMAN*
Ga0066679_103675632	3300005176	Soil	IDNNLATNGGGNGKSGYTFAATGAAIAPSLVPNSFYTTAAPLSAQTGTKSFCAFDDGVVRTAAPGVIVAVGGYGACQALLPMAN*
Ga0070761_100162875	3300005591	Soil	IDNNLASNGTPAGSGKSGYLFVATAVTGAASPIPNEFYTTGTPISAQTGTKAFCAFDDGVVRTQAPGVITLVGSYGGCQALNPMAN*
Ga0070761_100648454	3300005591	Soil	IDNNLASNGTPAGSGKSGYLFVATAVTGAASPIPNEFYTTATPISAQTGTKAFCAFDDGVVRTQAPGVITLVGSYGGCQALNPMAN*
Ga0070763_100048057	3300005610	Soil	CTPAVATGCLIDNNLASNGTPAGSGKSGYLFVATAVTGAASPIPNEFYTTATPISAQTGTKAYCAFDDGVIRTQAPGVITLVGSYGGCQALNPMAN*
Ga0070763_102086431	3300005610	Soil	NGTPAASGKSGYSFASTPSTGAGSTVPNQFLTTATPLSATTGSKAYCAVDDGVVRTQAPGTLTLVASYAACQALNPLAN*
Ga0070763_102593351	3300005610	Soil	LATNGAGGGKSGYNFAAAPQTGAGSPIPNEFFTTGAPISAQTGTKSYCAFDDGVVRTQPAGNIAVVGGYGPCQALLPMAN*
Ga0070763_108892511	3300005610	Soil	AGLGGASPCTPAPATGCLIDNNLATNGAGGGKSGYTFFATPSTGAGSPVPNQFYTTGTPISAQTGTKAYCAFDDGVVRTAAAGTIAQVASYAACQALLPMAN*
Ga0070766_106641752	3300005921	Soil	PASGCLIDNNLATNGAGGGKSGYKFAATSLAGAASPIPNEFWTTGTPISAQTGTKAYCAFDDGVVRTQPAGTIALVGGYGACQALLPMAN*
Ga0070766_112755081	3300005921	Soil	TIGYANLASLGGASPCTPAVATGCLIDNNLAQDGTPVGSGKSGYLFAATAQAGPASPVPNEFWTTGTPISAQTGTKAYCAFDDGVVRTQAPGVITLVAGYGACQALNPMAN*
Ga0070765_1004670312	3300006176	Soil	NGTPAGSGKSGYLFVSTPSVGGASPVPNQFLATATPITATTGTKAYCAVDDGVVRTQAPGVITIVGSYAACQALNPLAN*
Ga0070765_1007403562	3300006176	Soil	LASLGGAAPCTPLPASGCLIDNNLATDGAGSGKSGYKFAATGVIAAPSLIPNEFYTTGTPISAQTGTKAFCAFDDGVVRTQAPGVITLVGGYAACQLLLPMAN*
Ga0099792_103880921	3300009143	Vadose Zone Soil	ANLGGASPCTPAVLTGCLIDDNLATNGAAGGKSGYNFAAAAVVGGGSPIPNEFFTTAAPISAQTGTKSYCAFDDGVVRTAAPGVIAVVGGYPACQALLPMAN*
Ga0116214_13505461	3300009520	Peatlands Soil	GCLIDNNLATNGAGNGKSGYMFASTGVIAAPSVIPNEFYTTATPISAQTGTKAYCAFDDGVVRTQAPGVITLVGGYAACQLLLPMAN*
Ga0116138_12311681	3300009552	Peatland	LATNGAGGGKSGYTFAATTAVGAGSPVPNEFWTTGTPISAQTGTKAYCAFDDGVVRTQPAGTITLVAGYGACQALLPMAN*
Ga0116216_101523303	3300009698	Peatlands Soil	SLGGAAPCTPLPASCCLIDNNLATDGAGNGKSGYKFAATGVIAAPSVIPNEFYTTGTPISAQTGTKAYCAFDDGVVRTQAPGTITLVGGYAACQLLLPMAN*
Ga0116216_103157952	3300009698	Peatlands Soil	GCLIDNNLATNGAGNGKSGYKFAATGVIAAPSVIPNEFYTTATPISAQTGTKAYCAFDDGVVRTQAPGVITLVGGYAACQLLLPMAN*
Ga0116217_100839433	3300009700	Peatlands Soil	GCLIDNNLATNGAGNGKSGYMFASTGVIAAPSVIPNEFYTTGTPISAQTGTKAYCAFDDGVVRTQAPGTITLVGGYAACQLLLPMAN*
Ga0116101_10264372	3300009759	Peatland	APCTPGTATGCLIDNLLATAASGGAGKSGYFFASTPGAGANSTVNNEFYTTALPISAQTGTKSYCAFDDGVIRQQPAGTTSLVGGYAACQALLPIAN*
Ga0099796_103861051	3300010159	Vadose Zone Soil	ERTIVTGEVGYFAAYPTVGYAILANLGGPSPCTPAVLTGCLIDDNLATNGAAGGKSGYNFAAAAVVGGGSPIPNEFFTTAAPISAQTGTKSFCAFDDGVVRTALPGVIAVVGGYPACQALLPMAN*
Ga0074046_104821571	3300010339	Bog Forest Soil	VATGCLIDNNLASDGAGGGKSGYKFAATTATGGGSPIPNEFWTTGTPISAQTGTKAFCAFDDGVVRTQPAGTITLVAGYVACQGLLPMAN*
Ga0137395_112378411	3300012917	Vadose Zone Soil	IVTGEIGYFSAYPTIGYPLTLGPLGGAAPCTPLVATGCLIDNNLATNGGGNGKSGYTFAATGAAIAPSLVPNSFYTTAAPLSAQTGTKSFCAFDDGVVRTAAPGVIVAVGGYGACQALLPMAN*
Ga0137419_104184982	3300012925	Vadose Zone Soil	AAASERTIVTGEVGYFAAYPTVGYAILANLGGASPCTSAVLTGCLIDDNLASNGAGGGKSGYLFAATAVVGGGSPIPNEYFTTAAPISAQTGTKSFCAFDDGVVRTAAPGVIAVVGGYAACQALLPMAN*
Ga0181534_100536763	3300014168	Bog	GTPAGSGKSGYSFVSTPSTGAGSAVPNQFLTTGTPLSATTGSKAYCATDDGVVRTQAPGTITIVGGYVACQGLNPLAN*
Ga0181537_105340782	3300014201	Bog	AASERTTVTGEIGYFAAYPTVGYTSLAGLGGASPCTPAPATGCLIDNNLATNGAGGGKSGYTFAATPSTGAGSPVPNQFYTTGTPISAQTGTKAYCAFDDGVVRTQPAGTITVVPSYAGCQALLPMAN*
Ga0181522_101985032	3300014657	Bog	LIDNNLATNGAGGGKSGYTFAATPSTGAGSPVPNQFYTTGTPISAQTGTKAYCAFDDGVVRTQPAGTITAVASYGACQALLPMAN*
Ga0181519_101629603	3300014658	Bog	TATGCLIDNLLASASAGAGKSGFFFSATPSAGAGSTVNNQFYATGYPITAQTGTKSYCAFDDGVVRQQPAGTITQVGSYGACQLLLPIAN*
Ga0137418_104898681	3300015241	Vadose Zone Soil	PTIGYSVLANLGGASPCTPAVLTGCLIDNNLASNGAGGGKSGYNFAAAAVVGGGSPIPNEFFTTAAPISAQTGTKSFCAFDDGVVRTALPGVIAVVGGYPACQALLPMAN*
Ga0187853_104149681	3300017940	Peatland	KLGGAAPCTPGTATGCLIDNLLASASAGAGKSGFFFSATPSAGAGSTVNNQFYATGYPITAQTGTKSYCAFDDGVVRQQPAGTITQVGSYGACQLLLPIAN
Ga0187847_100151196	3300017948	Peatland	VLAKLGGAAPCTPGTATGCLIDNLLATAASGGAGKSGYFFASTPGAGANSTVNNEFYTTALPISAQTGTKSYCAFDDGVIRQQPAGTTSLVGGYAACQALLPIAN
Ga0187782_102369123	3300017975	Tropical Peatland	PAGSGKSGYLFASTPSTGAGSPVPNQFYTTGTPISAQTGTKAYCAFDDGVVRTQAPGVITLVGSYAGCQALNPMAN
Ga0187884_101657042	3300018009	Peatland	GYFAAYPTVGYAALAALGGASPCTPAVATGCLIDNNLATNGAGGGKSGYTFAATTAVGAGSPVPNEFWTTGTPISAQTGTKAYCAFDDGVVRTQPAGTITLVAGYGACQALLPMAN
Ga0187855_102357032	3300018038	Peatland	SPCTPAVATGCLIDNNLATNGAAGGKSGYNFVATTATGGGSPIPNEFWTTATPISAQTGTKAYCAFDDGVVRTQPAGTITLVAGYGACQALLPMAN
Ga0187890_107090641	3300018044	Peatland	YTVLAKLGGAAPCTPGTATGCLIDNLLATAASGGAGKSGYFFASTPSAGANSTVNNQFYTTALPISAQTGTKSYCAFDDGVIRQQPAGTTSLVGGYAACQALLPIAN
Ga0187859_100455481	3300018047	Peatland	DSSAAASERSIVTAEVGYYSAYPTIGYTVLAKLGGAAPCTPGTATGCLIDNLLATAASGGAGKSGYFFASTPGAGANSTVNNEFYTTALPISAQTGTKSYCAFDDGVIRQQPAGTTSLVGGYAACQALLPIAN
Ga0187858_107363941	3300018057	Peatland	LATNGAGGGKSGYTFAATTAVGAGSPVPNEFWTTGTPISAQTGTKAYCAFDDGVVRTQPAGTITLVAGYGACQALLPMAN
Ga0187766_112580761	3300018058	Tropical Peatland	GCLIDDNLATNGAGGGKSGYNFAATPSAGPNSPVPNQFYTTATPISAQTGTKAYCAFDDGVLRTQPAGTITLVASYGACQALLPMAN
Ga0187772_100833983	3300018085	Tropical Peatland	PATGCLIDNNLATNGAGGGKSGYNFAATAVTGAGSPIPNEFYTTGTPISAQTGTKAYCAFDDGVVRTQPAGTITLVASYAACQALLPMAN
Ga0187772_104864591	3300018085	Tropical Peatland	TGCLIDNNLATNGAGGGKSGYNFAATAVTGAGSPIPNEFYTTGTPISAQTGTKAYCAFDDGVVRTQPAGTITLVASYAACQALLPMAN
Ga0187769_108956421	3300018086	Tropical Peatland	CLIGNNLATNGAGGGKSGYNFAATADAGAGSPNPNEFYTATPIRPQTGTKAYCVFDDGVVRQQAPGVIALVGGYGACQALLPLRN
Ga0187771_106482001	3300018088	Tropical Peatland	YTALATLGGASPCTPAPATGCLIDNNLATNGAGNGKSGYNFDAQAVTGAGSPLPNEFYTTATPISAQTGAKAYCAYDDGVLRQQAPGVITLVASYAACQLLLPIAN
Ga0187771_119365021	3300018088	Tropical Peatland	LATLGGASPCTPAPATGCLIDNNLATNGAGNGKSGYNFAATAVTGAGSPLPNEFYTTATPISAQTGTKAYCAYDDGVLRQQAPGVITLVASYNACQLLLPIAN
Ga0187770_100538103	3300018090	Tropical Peatland	SPCTPGLATGCLIDDNLASNGAGGGKSGYNFAATPSASAGSAVPDEFYATATPISAQTGTQAYCAFDDGVVRTQPAGTITLVASYGACQALLPMAN
Ga0187770_104614722	3300018090	Tropical Peatland	ASNGAGGGKSGYNFAATPSTGAGSPVPNQFYTTATPISSKGGTKAYCAFDDGVVRTQPAGTITLVASYGACQALLPLDN
Ga0187770_107667421	3300018090	Tropical Peatland	SNGAGGGKSGYNFAATPSTGAGSPVPNQFYTTATPISAQTGTKAYCAFDDGVLRTQPAGTITLVASYGACQALLPLAN
Ga0210395_113388511	3300020582	Soil	GYTSLQGLGGASPCTPAPATGCLIDNNLASDGAGGGKSGYKFAATPSTGAGSPVPNQFYTTGTPISAQTGTKAYCAFDDGVVRTEPAGTITAPGSYGACQALLPMAN
Ga0215015_109318471	3300021046	Soil	DNNLASNGAAGGKSGYNFAATTAVGGGSPIPNEFWTTATPISAQTGTKAYCAFDDGVVRTQPAGTIALVGGYGACQALLPMAN
Ga0210396_100568195	3300021180	Soil	PAVATGCLIDNNLATDGTPVGSGKSGYLFAATAQAGPASPIPNEFWTTGTPISAQTGTKAYCAFDDGVVRTQAPGVITLVAGYGACQALNPMAN
Ga0210388_100299261	3300021181	Soil	GKSGYNFAATGVIAAPSLIPNEFYTTGTPISAQTGTKAYCAFDDGVVRTQAPGVITLVGGYAACQLLLPMAN
Ga0210393_103328431	3300021401	Soil	DNNLATNGAGGGKSGYKFAATSLAGAASPIPNEFWTTGTPISAQTGTKAYCAFDDGVVRTQPAGTIALVGGYGACQALLPMAN
Ga0210385_100064988	3300021402	Soil	YFAAYPTIGYANLASLGGASPCTPAVATGCLIDNNLAQDGTPVGSGKSGYLFAATAQAGPASPVPNEFWTTGTPISAQTGTKAYCAFDDGVVRTQAPGVITLVAGYGACQALNPMAN
Ga0210385_100110787	3300021402	Soil	YAVLANLGGASPCTPAVATGCLIDNNLATDGTPVGSGKSGYLFAATAQAGPASPIPNEFWTTGTPISAQTGTKAYCAFDDGVVRTQAPGVITLVAGYGACQALNPMAN
Ga0210385_103005791	3300021402	Soil	AAASERTTVTGEIGYFAAYPTVGYTSLQGLGGASPCTPAPATGCLIDNNLASDGAGGGKSGYKFAATPSTGAGSPVPNQFYTTGTPISAQTGTKAYCAFDDGVVRTEPAGTITAPGSYGACQALLPMAN
Ga0210389_112874581	3300021404	Soil	IGYFAAYPTVGYTSLQGLGGASPCTPAPATGCLIDNNLASDGAGGGKSGYKFAATPSTGAGSPIPNQFYTTGAPISAQTGTKSYCAFDDGVVRTAAAGTIATVASYNACQALLPMAN
Ga0210387_107722192	3300021405	Soil	YFASYPTIGYASLAALGGASPCTPGVATGCLIDNNLASNGAGGGKSGYMFAATTATGAASPIPNEFWTTGTPISVQTGTKAYCAFDDGVVRTQPPGTVTLVAGYAACQALLPMAN
Ga0210386_103118131	3300021406	Soil	LAGLGGASPCTPAPATGCLIDNNLATNGAGGGKSGYSFAATPSTGAGSPIPNQFYTTGTPISAQTGTKAYCAFDDGVVRTQPAGTITAVPSYGACQALLPMAN
Ga0210394_109794191	3300021420	Soil	AASERTIITGEIGYFASYPTIGYASLAALGGASPCTPGVATGCLIDNNLASNGAGGGKSGYMFAATTATGAASPIPNEFWTTGTPISVQTGTKAYCAFDDGVVRTQPPGTVTLVAGYAACQALLPMAN
Ga0210394_114006291	3300021420	Soil	TGEIGYFAAYPTIGYVILATLGGASPCTPLPASGCLIDNNLAQNGTPVGSGKSGYLFAAAGVVGAGSPIPNEFLTTATPISAQTGTKAFCGTDDGVVRTQAPGVIALVGGYGACQLLNPMAN
Ga0210391_103685311	3300021433	Soil	AASERTVVTGEVGYFAAYPTIGYANLASLGGASPCTPAVATGCLIDNNLAQDGTPVGSGKSGYLFAATAQAGPASPVPNEFWTTGTPISAQTGTKAYCAFDDGVVRTQAPGVITLVAGYGACQALNPMAN
Ga0210391_104491701	3300021433	Soil	TGCLIDNNLASNGAGGGKSGYKFAATTATGAASPIPNEFWTTGTPISVQTGTKAYCAFDDGVVRTQPAGTVTLVAGYAACQALLPMAN
Ga0210390_107189941	3300021474	Soil	NNLATDGAGGGKSGYKFTAAPQTGAGSPIPNEFYTTGYPISAQTGTKSYCAFDDGVVRTQPAGNIAQVGGYGPCQALLPMAN
Ga0210390_115584111	3300021474	Soil	GYGSLAVLGGASPCTPLPASGCLIDNNLATNGAGGGKSGYKFAATSLAGAASPIPNEFWTTGTPISAQTGTKAYCAFDDGVVRTQPAGTIALVGGYGACQALLPMAN
Ga0210398_102860852	3300021477	Soil	LANNGTPPGSGKSGYLFVSTQSTGAGSPVPNQFLTTATPISVTTGSKAYCATDDGVVRTQPAGTITIVASYIACQGLNPLAN
Ga0210398_104985942	3300021477	Soil	SERTIVTGEIGYFAAYPTLGYGSLAVLGGASPCTPLPASGCLIDNNLATNGAGGGKSGYNFVATSLAGAASPIPNEFWTTGTPISAQTGTKAYCAFDDGVVRTQPAGTIALVGGYGACQALLPMAN
Ga0210398_108119441	3300021477	Soil	AAASERTVVTGEVGYFAAYPTVGYAVLANLGGASPCTPAVATGCLIDNNLAQDGTPTGSGKSGYKFAATAQAGPASPIPNEFWTTATPISAQTGTKAFCAFDDGVVRTQAPGVITLVAGYGACQALNPMAN
Ga0210410_111880311	3300021479	Soil	GASPCTPSIAGGCLIDNNLATDGAGGGKSGYKFAAAALAGAGSGIPNEFYTTATPISAQTGTKAYCAFDDGVVRTQPAGTIALVASYVACQGLLPMAN
Ga0242647_10429201	3300022505	Soil	AAASERTVVTGEVGYFAAYPTIGYANLASLGGASPCTPAVATGCLIDNNLAQDGTPVGSGKSGYLFAATAQAGPASPIPNEFWTTATPISAQTGTKAYCAFDDGVVRTQAPGVITLVAGYGACQALNPMAN
Ga0242659_11086951	3300022522	Soil	RFRAYCRHRRSRLFAAYPTIGYANLASLGGASPCTPAVATGCLIDNNLAQDGTPVGSGKSGYLFAATAQAGPASPVPNEFWTTGTPISAQTGTKAYCAFDDGVVRTQAPGVITLVAGYGACQALNPMAN
Ga0242670_10651841	3300022708	Soil	RTIVTGEIGYFAAYPTVGYSALAGLGGASPCTPAVATGCLIDNNLATNGAGGGKSGYNFAATTATGGGSPIPNEFWTTGTPISAQTGTKAYCAFDDGVVRTQPAGTITLVAGYVACQGLLPMAN
Ga0242677_10877441	3300022713	Soil	MIDSNLANNGTPVGSGKSGYLFVSTESKGGGSPVPNQFLATGTPISVTTGSKAYCATDDGVVRTQPAGTITIVAS
Ga0224561_10024302	3300023030	Soil	LANDGTPAGSGKSGYKFASTPSTGAGSTVPNQFLTTGTPLSATTGSKAYCAVDDGVVRTAAPGTITLVASYAACQALNPLAN
Ga0208936_10070933	3300025404	Peatland	ASTRSIVTAEVGYYSAYPTIGYTVLAKLGGAAPCTPGTATGCLIDNLLASASAGAGKSGFFFSATPSAGAGSTVNNQFYATGYPITAQTGTKSYCAFDDGVVRQQPAGTITQVGSYGACQLLLPIAN
Ga0208935_10122731	3300025414	Peatland	IVTAEVGYYSAYPTIGYTVLAKLGGAAPCTPGTATGCLIDNLLASASAGAGKSGFFFSATPSAGAGSTVNNQFYATGYPITAQTGTKSYCAFDDGVVRQQPAGTITQVGSYGACQLLLPIAN
Ga0209524_10956911	3300027521	Forest Soil	YGALAVLGGASPCTPAVASGCLIDNNLATNGAGGGKSGYMFAGTPSAGAGSPIPNRFYTTATPISAQTGTKAYCAFDDGVVRTQPAGNIALVGSYGACQALLPMAN
Ga0209331_10550592	3300027603	Forest Soil	VTGEIGYFAAYPTIGYGALAVLGGASPCTPAVASGCLIDNNLATNGAGGGKSGYMFAGTPSAGAGSPIPNRFYTTATPISAQTGTKAYCAFDDGVVRTQPAGNIALVGSYGACQALLPMA
Ga0209448_101436231	3300027783	Bog Forest Soil	DSSAAASERTIVTGKIGYFAAYPTVGYPAALGPLGGAAPCTPLPASGCLIDNNLATNGAGNGKSGYKFASTGVIAAPSVIPNEFYTTATPISAQTGTKAYCAFDDGVVRTQAPGVITLVGGYAACQLLLPMAN
Ga0209139_100636221	3300027795	Bog Forest Soil	LAGLGGASPCTPAPATGCLIDNNLATNGAGGGKSGYTFAATPSTGAGSPVPNQFYTTGTPISAQTGTKAYCAFDDGVVRTQPAGTITQVASYGACQALLPMAN
Ga0209040_102800201	3300027824	Bog Forest Soil	GYATLAALGGASPCVPGPATGCLIDNNLATNGAGGGKSGYNFASTPSTGAGSPVPNQFYTTGTPISAQTGTKAFCAFDDGVVRTNAPGVITLIPSYAGCQGMLPMAN
Ga0209773_103028781	3300027829	Bog Forest Soil	AALAALGGASPCTPAVATGCLIDNNLAQNGTPAGGGKSGYLFAATTAVGGGSPIPNEFWTTATPISAQTGTKAYCAFDDGVVRTQAPGVITLVAGYAACQALNPLAN
Ga0209693_100764273	3300027855	Soil	GYASLAALGGASPCTPGVATGCLIDNNLASNGAGGGKSGYMFAATTATGAASPIPNEFWTTGTPISVQTGTKAYCAFDDGVVRTQPPGTVTLVAGYAACQALLPMAN
Ga0209693_102301211	3300027855	Soil	VVTGEIGYFAAYPTIGYATLANLGGASPCTPAVATGCLIDNNLATNGAGGGKSGYNFAAAPQTGAGSPIPNEFFTTGAPISAQTGTKSYCAFDDGVVRTQPAGNIAVVGGYGPCQALLPMAN
Ga0209579_104329781	3300027869	Surface Soil	TPAGSGKSGYKFASTPSTGAGSAVPNQFYTTGTPISTQTGTKAYCAFDDGVVRTQAAGNVTLVGSYAACQALNPLAN
Ga0209275_101051071	3300027884	Soil	AGLGGASPCTPAPATGCLIDNNLATNGAGGGKSGYTFAATPSTGAGSPVPNQFFTTGAPISAQTGTKSYCAFDDGVVRTAAAGTIATVASYNACQALLPMAN
Ga0209624_100065349	3300027895	Forest Soil	LATNGAGGGKSGYNFAATSLAGAASPIPNEFWTTGTPISAQTGTKAYCAFDDGVVRTQPAGTIALVGGYGACQALLPMAN
Ga0209624_101571382	3300027895	Forest Soil	NLSNDGTPAGSGKSGYKFASTPSTGGASPVPNQFLTTATPITNTTGTKAYCAVDDGVVRTAAPGVITLVASYAACQALNPLAN
Ga0209526_103894791	3300028047	Forest Soil	AYPTIGYGALAVLGGASPCTPAVASGCLIDNNLATNGAAGGKSGYMFAGTPSAGAGSPVPNQFYTTATPISAQTGTKAYCAFDDGVVRTQPAGNIALVGSYGACQALLPMAN
Ga0302197_103285021	3300028873	Bog	TGEIGFFAAYPTVGYGTLAVLGGASPCTPGTATGCLIDNNLATNGAGGGKSGYNFAATPSTGAGSPVPNQFYTTGTPLSAQTGTKAFCAFDDGVVRTQAAGVITLVASYAACQALLPMAN
Ga0302154_104030061	3300028882	Bog	AALGGASPCTPGPATGCLIDNNLATNGAGGGKSGYNFAATPSTGAGSPVPNQFYTTGTPISAQTGTKAYCAFDDGVVRTQAAGVITLVASYAACQALLPMAN
Ga0308309_101098191	3300028906	Soil	PTIGYGALAVLGGASPCTPLPASGCLIDNNLATNGAGGGKSGYNFVATSLAGAASPIPNEFWTTGTPISAQTGTKAYCAFDDGVVRTQPAGTIALVGGYGACQALLPMAN
Ga0308309_114219221	3300028906	Soil	ANDSSAAASERTTVTGEIGYFAAYPTVGYTSLAGLGGASPCTPAPATGCLIDNNLATDGAGGGKSGYKFAATPQTGGGSPIPNEFYTTGTPISAQSGTKAYCAFDDGVVRTQPAGTITLVASYGACQALLPMAN
Ga0311341_108175381	3300029908	Bog	ATGCLIDNNLATNGAGGGKSGYNFAATPSTGAGSPVPNQFYTTGTPISAQTGTKAYCAFDDGVVRTQAAGVITLVASYAACQALLPMAN
Ga0311326_101529902	3300029917	Bog	AANDSSGAASERTIVTGEIGFFAAYPTVGYGTLAVLGGASPCTPGTATGCLIDNNLATNGAGGGKSGYNFAATPSTGAGSPVPNQFYTTGTPLSAQTGTKAFCAFDDGVVRTQAAGVITLVASYAACQALLPMAN
Ga0302143_11049722	3300029918	Bog	TPGTATGCLIDNNLATNGAGGGKSGYNFAATPSTGAGSPVPNQFYTTGTPLSAQTGTKAFCAFDDGVVRTQAAGVITLVASYAACQALLPMAN
Ga0311328_103026691	3300029939	Bog	LANLGGASPCTPGVATGCLIDNNLATDGAGGGKSGYKFAATPSTGAGSPVPNQFYTTGTPISAQTGTKAYCAFDDGVVRTQAAGVITLVASYAACQALLPMAN
Ga0311342_106266441	3300029955	Bog	IGYFAAYPTQGYTTLANLGGASPCTPGVATGCLIDNNLATDGAGGGKSGYKFAATPSTGAGSPVPNQFYTTGTPISAQTGTKAYCAFDDGVVRTQAAGVITLVASYAACQALLPMAN
Ga0311338_100526061	3300030007	Palsa	GYYAAYPTVGYATLAALGGAAPCTPAVATGCLIDNNLASNGPAGGGKSGYNFTAAPATGAGSPIPNEFWTTAAPVTAQTGTRSYCAFDDGVVRQGASGVITAVGSYVACQGLNPLAN
Ga0310037_104184221	3300030494	Peatlands Soil	PASGCLIDNNLATDGAGNGKSGYKFAATGVIAAPSVIPNEFYTTGTPISAQTGTKAYCAFDDGVVRTQAPGTITLVGGYAACQLLLPMAN
Ga0210286_13218041	3300030597	Soil	ALGYGSLAVLGGASPCTPLPASGCLIDNNLATNGAGGGKSGYNFVATSLAGAASPIPNEFWTTGTPISAQTGTKAYCAFDDGVVRTQPAGTIALVGGYGACQALLPMAN
Ga0302325_125593471	3300031234	Palsa	GEIGYFAAYPTVGYVVLATLGGASPCTPLPASGCLIDNNLASNGAGAGKSGYNFTAIPSTGGGSPVPNQFYTTATPFSAQTGTKAFCAFDDGVVRTQAPGVITLVAGYGACQALLPMAN
Ga0302140_104539381	3300031261	Bog	ASERTIVTGEIGFFAAYPTVGYTTLAALGGASPCTPGPATGCLIDNNLATNGAGGGKSGYNFAATPSTGAGSPVPNQFYTTGTPISAQTGTKAYCAFDDGVVRTQAAGVITLVASYAACQALLPMAN
Ga0302326_130951812	3300031525	Palsa	SPCTPGTATGCLIDNKLATDGAGGGKSGYKFAATPSTGAGSPVPNQFYTTGTPISAQTGTKAYCAFDDGVVRTQAAGVITLVASYAACQALLPMAN
Ga0310686_1040420481	3300031708	Soil	GSGKSGYLFVATAVTGAASPIPNEFYTTATPISAQTGTKAFCAFDDGVVRTQAPGVITLVGSYGGCQALNPMAN
Ga0310686_10542569680	3300031708	Soil	CLIDNNLASNGTPAGSGKSGYLFVATAVTGAASPIPNEFYTTGTPISAQTGTKAFCAFDDGVVRTQAPGVITLVGSYGGCQALNPMAN
Ga0310686_1136122661	3300031708	Soil	ATLAALGGASPCTPAVATGCLIDNNLALNGTPTGSGKSGYLFTALPQTGTGSPIPNEFYTTGTPISAQTGTKAYCAFDDGVVRTQAPGVITLVGSYAGCQALNPMAN
Ga0310686_1170640401	3300031708	Soil	LGGAAPCTPLPASGCLIDNNLATDGAGNGKSGYKFASTGVIAAPSVIPNEFYTTGTPISAQTGTKAYCAFDDGVVRTQAPGVITLVGGYAACQLLLPMAN
Ga0307476_100005821	3300031715	Hardwood Forest Soil	LGGASPCTPLPASGCLIDNNLATNGAGGGKSGYKFAATSLAGAASPIPNEFWTTGTPISAQTGTKAYCAFDDGVVRTQPAGTIALVGGYGACQALLPMAN
Ga0307476_107830791	3300031715	Hardwood Forest Soil	PATGCLIDNNLASDGAGGGKSGYKFTAAALTGAGSPVPNEFYTTGTPISAQTGTKAYCAFDDGVVRTQPAGTITLVASYGACQALLPMAN
Ga0307478_104152741	3300031823	Hardwood Forest Soil	GYFAAYPTVGYAVMANLGGASPCTPAVLTGCLIDNNLASNGAGGGKSGYNFAAAAVVGGGSPIPNEFFTTATPISAQTGTKAFCAFDDGVVRTQAPGVITLVAGYVACQGLLPMAN
Ga0307478_112307671	3300031823	Hardwood Forest Soil	SGCLIDNNLATNGAGGGKSGYLFAATSLAGAASPIPNEFWTTGTPISAQTGTKAYCAFDDGVVRTQPAGTIALVGGYGACQALLPMAN
Ga0311301_118239232	3300032160	Peatlands Soil	TNGAGNGKSGYMFASTGVIAAPSVIPNEFYTTATPISAQTGTKAYCAFDDGVVRTQAPGVITLVGGYAACQLLLPMAN
Ga0371489_0066512_1985_2245	3300033755	Peat Soil	LIDNLLASAIAGGAGKSGYFFAATPSAGAASTVNNQFYTTAAPISAQTGTKSYCAFDDGVIRQQPAGTTSVVGGYGACQALLPIAN
Ga0370483_0178050_3_239	3300034124	Untreated Peat Soil	TNGAGGGKSGYNFAATPSVGAGSPVPNQFYTTGTPISAQTGTKAFCAFDDGVVRTQPAGNIALVASYAACQALLPMAN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F062930

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences