Metagenome / Metatranscriptome Family F062887

Basic Information
Family ID	F062887
Family Type	Metagenome / Metatranscriptome
Number of Sequences	130
Average Sequence Length	44 residues
Representative Sequence	MPVRKSGGGYKYGKSGKVYKGKGAKAKAAKQGRAIQASKHKKR
Number of Associated Samples	111
Number of Associated Scaffolds	130

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	77.17 %
% of genes near scaffold ends (potentially truncated)	16.15 %
% of genes from short scaffolds (< 2000 bps)	58.46 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.66

Most Common Taxonomy
Group	Unclassified (63.077 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Mammals → Digestive System → Foregut → Rumen → Rumen (8.461 % of family members)
Environment Ontology (ENVO)	Unclassified (31.538 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (28.462 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 26.76% β-sheet: 14.08% Coil/Unstructured: 59.15%
Feature Viewer

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Pfam ID	Name	% Frequency in 130 Family Scaffolds
PF01343	Peptidase_S49	4.62
PF03237	Terminase_6N	3.08
PF06737	Transglycosylas	3.08
PF02195	ParBc	2.31
PF04466	Terminase_3	2.31
PF12236	Head-tail_con	1.54
PF11651	P22_CoatProtein	1.54
PF01551	Peptidase_M23	1.54
PF07411	DUF1508	1.54
PF05069	Phage_tail_S	1.54
PF00196	GerE	1.54
PF13560	HTH_31	0.77
PF13473	Cupredoxin_1	0.77
PF04404	ERF	0.77
PF08291	Peptidase_M15_3	0.77
PF12850	Metallophos_2	0.77
PF01391	Collagen	0.77
PF05063	MT-A70	0.77
PF05133	Phage_prot_Gp6	0.77
PF13479	AAA_24	0.77
PF03592	Terminase_2	0.77
PF04586	Peptidase_S78	0.77
PF05065	Phage_capsid	0.77
PF00476	DNA_pol_A	0.77
PF02739	5_3_exonuc_N	0.77
PF13148	DUF3987	0.77
PF05709	Sipho_tail	0.77
PF01381	HTH_3	0.77
PF01471	PG_binding_1	0.77
PF00145	DNA_methylase	0.77
PF06152	Phage_min_cap2	0.77
PF15919	HicB_lk_antitox	0.77
PF12705	PDDEXK_1	0.77
PF10145	PhageMin_Tail	0.77
PF13578	Methyltransf_24	0.77
PF13392	HNH_3	0.77
PF05866	RusA	0.77
PF03864	Phage_cap_E	0.77
PF10926	DUF2800	0.77
PF07484	Collar	0.77
PF01555	N6_N4_Mtase	0.77

COG ID	Name	Functional Category	% Frequency in 130 Family Scaffolds
COG0616	Periplasmic serine protease, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	9.23
COG1783	Phage terminase large subunit	Mobilome: prophages, transposons [X]	2.31
COG3422	Uncharacterized conserved protein YegP, UPF0339 family	Function unknown [S]	1.54
COG4725	N6-adenosine-specific RNA methylase IME4	Translation, ribosomal structure and biogenesis [J]	1.54
COG5005	Mu-like prophage protein gpG	Mobilome: prophages, transposons [X]	1.54
COG0258	5'-3' exonuclease Xni/ExoIX (flap endonuclease)	Replication, recombination and repair [L]	0.77
COG0270	DNA-cytosine methylase	Replication, recombination and repair [L]	0.77
COG0749	DNA polymerase I, 3'-5' exonuclease and polymerase domains	Replication, recombination and repair [L]	0.77
COG0863	DNA modification methylase	Replication, recombination and repair [L]	0.77
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	0.77
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	0.77
COG3728	Phage terminase, small subunit	Mobilome: prophages, transposons [X]	0.77
COG3740	Phage head maturation protease	Mobilome: prophages, transposons [X]	0.77
COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	Replication, recombination and repair [L]	0.77
COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	Mobilome: prophages, transposons [X]	0.77
COG4722	Phage-related protein YomH	Mobilome: prophages, transposons [X]	0.77

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.08 %
All Organisms	root	All Organisms	36.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.08 %
cellular organisms	root	All Organisms → cellular organisms	21.54 %
Viruses	superkingdom	All Organisms → Viruses	15.38 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.08 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	21.54 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.77 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	3.08 %
unclassified viruses	clade	All Organisms → Viruses → unclassified viruses	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.08 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.77 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3.08 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	3.08 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	3.08 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	2.31 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.31 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.54 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.77 %
unclassified DNA viruses	no rank	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.08 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.77 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	3.08 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	3.08 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	2.31 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.54 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.77 %
unclassified dsDNA viruses	no rank	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses	0.77 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.77 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.77 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.77 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.77 %
Chlamydiae	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Chlamydiae	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.08 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.77 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	3.08 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	3.08 %
Patescibacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group	2.31 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.77 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.77 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.77 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.77 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.77 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.77 %
Chlamydiia	class	All Organisms → cellular organisms → Bacteria → PVC group → Chlamydiae → Chlamydiia	0.77 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.08 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.77 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	3.08 %
Microgenomates group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group	2.31 %
Pepyhexavirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Pepyhexavirus	1.54 %
Parachlamydiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Chlamydiae → Chlamydiia → Parachlamydiales	0.77 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.77 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	0.77 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.77 %
unclassified Phycisphaerae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae	0.77 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.77 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.77 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.08 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.77 %
unclassified Pyrinomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae	3.08 %
Candidatus Gottesmanbacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → Candidatus Gottesmanbacteria	2.31 %
Pepyhexavirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Pepyhexavirus	1.54 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	0.77 %
Waddliaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Chlamydiae → Chlamydiia → Parachlamydiales → Waddliaceae	0.77 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.77 %
Oscillospiraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae	0.77 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.77 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.77 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.77 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.08 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.77 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	3.08 %
Candidatus Gottesmanbacteria bacterium GW2011_GWB1_49_7	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → Candidatus Gottesmanbacteria → Candidatus Gottesmanbacteria bacterium GW2011_GWB1_49_7	2.31 %
Pepyhexavirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Pepyhexavirus	1.54 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	0.77 %
Waddlia	genus	All Organisms → cellular organisms → Bacteria → PVC group → Chlamydiae → Chlamydiia → Parachlamydiales → Waddliaceae → Waddlia	0.77 %
Anaerotruncus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Anaerotruncus	0.77 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	0.77 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.77 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.77 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.77 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.08 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.77 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	3.08 %
Candidatus Gottesmanbacteria bacterium GW2011_GWB1_49_7	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → Candidatus Gottesmanbacteria → Candidatus Gottesmanbacteria bacterium GW2011_GWB1_49_7	2.31 %
Pepyhexavirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Pepyhexavirus	1.54 %
unclassified Anaerotruncus	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Anaerotruncus → unclassified Anaerotruncus	0.77 %
unclassified Flavobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae	0.77 %
Waddlia chondrophila	species	All Organisms → cellular organisms → Bacteria → PVC group → Chlamydiae → Chlamydiia → Parachlamydiales → Waddliaceae → Waddlia → Waddlia chondrophila	0.77 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	0.77 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.77 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.77 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.77 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.08 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.77 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	3.08 %
Candidatus Gottesmanbacteria bacterium GW2011_GWB1_49_7	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → Candidatus Gottesmanbacteria → Candidatus Gottesmanbacteria bacterium GW2011_GWB1_49_7	2.31 %
Pepyhexavirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Pepyhexavirus	1.54 %
Anaerotruncus sp. DFI.9.16	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Anaerotruncus → unclassified Anaerotruncus → Anaerotruncus sp. DFI.9.16	0.77 %
Flavobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	0.77 %
Waddlia chondrophila	species	All Organisms → cellular organisms → Bacteria → PVC group → Chlamydiae → Chlamydiia → Parachlamydiales → Waddliaceae → Waddlia → Waddlia chondrophila	0.77 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	0.77 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.77 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.77 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.77 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.77 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_16995106	Not Available	2204	Open in IMG/M
2088090015\|GPICI_9171923	All Organisms → Viruses → Predicted Viral	3352	Open in IMG/M
2166559006\|FI_contig05004	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Pepyhexavirus	1445	Open in IMG/M
2199352025\|deepsgr__Contig_98595	Not Available	930	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0899153	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → Candidatus Gottesmanbacteria → Candidatus Gottesmanbacteria bacterium GW2011_GWB1_49_7	9087	Open in IMG/M
3300000044\|ARSoilOldRDRAFT_c010259	Not Available	783	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101967712	Not Available	2186	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105869028	Not Available	1920	Open in IMG/M
3300000385\|PR_CR_10_Liq_1_inCRDRAFT_1035485	Not Available	1036	Open in IMG/M
3300000858\|JGI10213J12805_10089093	Not Available	894	Open in IMG/M
3300001687\|WOR8_10000512	All Organisms → cellular organisms → Bacteria	60132	Open in IMG/M
3300001960\|GOS2230_1041365	Not Available	1647	Open in IMG/M
3300002155\|JGI24033J26618_1019643	Not Available	857	Open in IMG/M
3300002231\|KVRMV2_101673743	Not Available	524	Open in IMG/M
3300002488\|JGI25128J35275_1000383	Not Available	13781	Open in IMG/M
3300002568\|C688J35102_120481465	All Organisms → Viruses → Predicted Viral	1104	Open in IMG/M
3300002597\|DRAFT_10045051	All Organisms → cellular organisms → Bacteria	36401	Open in IMG/M
3300003142\|Ga0052242_1015685	Not Available	922	Open in IMG/M
3300003885\|Ga0063294_10656612	Not Available	621	Open in IMG/M
3300003911\|JGI25405J52794_10057637	Not Available	837	Open in IMG/M
3300004022\|Ga0055432_10016457	Not Available	1481	Open in IMG/M
3300004074\|Ga0055518_10008162	Not Available	1729	Open in IMG/M
3300004186\|Ga0066647_10356868	Not Available	633	Open in IMG/M
3300004463\|Ga0063356_100803541	All Organisms → cellular organisms → Bacteria	1312	Open in IMG/M
3300004479\|Ga0062595_100046688	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Pepyhexavirus	1945	Open in IMG/M
3300004799\|Ga0058863_11766083	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → Candidatus Gottesmanbacteria → Candidatus Gottesmanbacteria bacterium GW2011_GWB1_49_7	3833	Open in IMG/M
3300004803\|Ga0058862_10330056	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	920	Open in IMG/M
3300005086\|Ga0072334_10015983	Not Available	503	Open in IMG/M
3300005162\|Ga0066814_10105346	Not Available	532	Open in IMG/M
3300005329\|Ga0070683_100108896	All Organisms → Viruses → Predicted Viral	2613	Open in IMG/M
3300005439\|Ga0070711_100037874	Not Available	3238	Open in IMG/M
3300005458\|Ga0070681_10119828	All Organisms → cellular organisms → Bacteria	2567	Open in IMG/M
3300005526\|Ga0073909_10001546	Not Available	6934	Open in IMG/M
3300005764\|Ga0066903_104714158	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	726	Open in IMG/M
3300005841\|Ga0068863_100009021	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → Candidatus Gottesmanbacteria → Candidatus Gottesmanbacteria bacterium GW2011_GWB1_49_7	9739	Open in IMG/M
3300006038\|Ga0075365_10943844	Not Available	608	Open in IMG/M
3300006196\|Ga0075422_10558576	Not Available	526	Open in IMG/M
3300006577\|Ga0074050_10521448	Not Available	753	Open in IMG/M
3300006752\|Ga0098048_1035514	Not Available	1610	Open in IMG/M
3300006802\|Ga0070749_10005618	Not Available	8264	Open in IMG/M
3300006871\|Ga0075434_100505531	Not Available	1229	Open in IMG/M
3300006871\|Ga0075434_101956331	Not Available	592	Open in IMG/M
3300006919\|Ga0070746_10425039	Not Available	592	Open in IMG/M
3300006929\|Ga0098036_1003841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5192	Open in IMG/M
3300007963\|Ga0110931_1008332	All Organisms → cellular organisms → Bacteria → Proteobacteria	3197	Open in IMG/M
3300009094\|Ga0111539_11213544	Not Available	876	Open in IMG/M
3300009156\|Ga0111538_11075195	All Organisms → Viruses → Predicted Viral	1017	Open in IMG/M
3300009176\|Ga0105242_10626013	Not Available	1043	Open in IMG/M
3300009176\|Ga0105242_12252802	Not Available	591	Open in IMG/M
3300009176\|Ga0105242_12353848	Not Available	579	Open in IMG/M
3300009488\|Ga0114925_10317034	Not Available	1062	Open in IMG/M
3300009506\|Ga0118657_10358360	All Organisms → Viruses → Predicted Viral	1935	Open in IMG/M
3300009790\|Ga0115012_11445966	Not Available	588	Open in IMG/M
3300010043\|Ga0126380_11706842	Not Available	566	Open in IMG/M
3300010319\|Ga0136653_10483148	Not Available	541	Open in IMG/M
3300010412\|Ga0136852_10000715	Not Available	35585	Open in IMG/M
3300010412\|Ga0136852_10036799	Not Available	5184	Open in IMG/M
3300010413\|Ga0136851_12284694	Not Available	511	Open in IMG/M
3300011412\|Ga0137424_1000016	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	32697	Open in IMG/M
3300012022\|Ga0120191_10000330	Not Available	3074	Open in IMG/M
3300012200\|Ga0137382_10936661	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	623	Open in IMG/M
3300012212\|Ga0150985_107192797	Not Available	736	Open in IMG/M
3300012212\|Ga0150985_111433752	Not Available	855	Open in IMG/M
3300012212\|Ga0150985_113800979	Not Available	536	Open in IMG/M
3300012212\|Ga0150985_114157322	Not Available	3007	Open in IMG/M
3300012469\|Ga0150984_115579547	Not Available	923	Open in IMG/M
3300012952\|Ga0163180_10674931	Not Available	795	Open in IMG/M
3300013101\|Ga0164313_10438028	Not Available	1089	Open in IMG/M
3300013101\|Ga0164313_10640632	Not Available	878	Open in IMG/M
3300013101\|Ga0164313_11627763	Not Available	519	Open in IMG/M
(restricted) 3300013127\|Ga0172365_10348694	Not Available	873	Open in IMG/M
3300014203\|Ga0172378_10549130	Not Available	856	Open in IMG/M
3300014913\|Ga0164310_10183345	Not Available	1282	Open in IMG/M
3300014965\|Ga0120193_10076905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	543	Open in IMG/M
3300014968\|Ga0157379_10607823	All Organisms → Viruses → Predicted Viral	1021	Open in IMG/M
3300015371\|Ga0132258_13612954	Not Available	1057	Open in IMG/M
3300015374\|Ga0132255_100029158	Not Available	6943	Open in IMG/M
3300017951\|Ga0181577_10006109	All Organisms → cellular organisms → Bacteria → PVC group → Chlamydiae → Chlamydiia → Parachlamydiales → Waddliaceae → Waddlia → Waddlia chondrophila	9185	Open in IMG/M
3300018063\|Ga0184637_10000742	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	23481	Open in IMG/M
3300018084\|Ga0184629_10007235	All Organisms → Viruses → Predicted Viral	4194	Open in IMG/M
3300018481\|Ga0190271_10023698	All Organisms → Viruses → Predicted Viral	4799	Open in IMG/M
3300019458\|Ga0187892_10001998	All Organisms → cellular organisms → Bacteria	43426	Open in IMG/M
3300019875\|Ga0193701_1031900	All Organisms → Viruses → Predicted Viral	1081	Open in IMG/M
3300019884\|Ga0193741_1024711	All Organisms → Viruses → Predicted Viral	1547	Open in IMG/M
3300020171\|Ga0180732_1048302	All Organisms → Viruses → Predicted Viral	1409	Open in IMG/M
3300020439\|Ga0211558_10002711	Not Available	9505	Open in IMG/M
3300020473\|Ga0211625_10021990	Not Available	4435	Open in IMG/M
3300021400\|Ga0224422_11463336	Not Available	46619	Open in IMG/M
3300021431\|Ga0224423_10001835	Not Available	32592	Open in IMG/M
3300021791\|Ga0226832_10229788	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	735	Open in IMG/M
3300021960\|Ga0222715_10424119	All Organisms → Viruses	722	Open in IMG/M
3300022167\|Ga0212020_1081914	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	541	Open in IMG/M
3300022226\|Ga0224512_10060238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	2217	Open in IMG/M
3300025132\|Ga0209232_1001274	All Organisms → cellular organisms → Bacteria	13816	Open in IMG/M
3300025132\|Ga0209232_1120023	Not Available	868	Open in IMG/M
3300025825\|Ga0210046_1296128	Not Available	527	Open in IMG/M
3300025912\|Ga0207707_10000268	All Organisms → cellular organisms → Bacteria	55992	Open in IMG/M
3300025912\|Ga0207707_10289832	All Organisms → cellular organisms → Bacteria	1416	Open in IMG/M
3300025931\|Ga0207644_11703314	Not Available	528	Open in IMG/M
3300025934\|Ga0207686_10001109	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	15671	Open in IMG/M
3300025934\|Ga0207686_10027889	Not Available	3312	Open in IMG/M
3300025944\|Ga0207661_10138959	All Organisms → Viruses → Predicted Viral	2089	Open in IMG/M
3300025970\|Ga0210081_1006553	Not Available	1542	Open in IMG/M
3300026088\|Ga0207641_10011302	All Organisms → cellular organisms → Bacteria	7325	Open in IMG/M
3300027814\|Ga0209742_10196221	Not Available	663	Open in IMG/M
3300027821\|Ga0209811_10000089	Not Available	40151	Open in IMG/M
3300027835\|Ga0209515_10058188	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2888	Open in IMG/M
3300027907\|Ga0207428_10070924	Not Available	2737	Open in IMG/M
3300027917\|Ga0209536_100989497	Not Available	1037	Open in IMG/M
3300027917\|Ga0209536_102121394	Not Available	671	Open in IMG/M
3300028591\|Ga0247611_10047201	Not Available	4389	Open in IMG/M
3300028591\|Ga0247611_11325822	Not Available	714	Open in IMG/M
3300028597\|Ga0247820_10075185	All Organisms → Viruses → Predicted Viral	2011	Open in IMG/M
3300028603\|Ga0265293_10460496	Not Available	745	Open in IMG/M
3300028797\|Ga0265301_10006270	Not Available	11434	Open in IMG/M
3300028797\|Ga0265301_10070938	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2673	Open in IMG/M
3300028797\|Ga0265301_10863436	Not Available	658	Open in IMG/M
3300028832\|Ga0265298_10003495	Not Available	20721	Open in IMG/M
3300028832\|Ga0265298_10055230	All Organisms → Viruses → Predicted Viral	4137	Open in IMG/M
3300029174\|Ga0168029_115250	Not Available	590	Open in IMG/M
3300029319\|Ga0183748_1003267	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	8528	Open in IMG/M
3300031226\|Ga0307497_10389983	Not Available	663	Open in IMG/M
3300031565\|Ga0307379_11167835	Not Available	641	Open in IMG/M
3300031576\|Ga0247727_10002197	All Organisms → cellular organisms → Bacteria	44944	Open in IMG/M
3300032053\|Ga0315284_10001513	All Organisms → cellular organisms → Bacteria	33135	Open in IMG/M
3300033233\|Ga0334722_10024716	Not Available	5057	Open in IMG/M
3300033463\|Ga0310690_12472441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Anaerotruncus → unclassified Anaerotruncus → Anaerotruncus sp. DFI.9.16	539	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	66.15%
Host-Associated	Host-Associated	33.08%
Engineered	Engineered	0.77%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	40.77%
Terrestrial	Environmental → Terrestrial	25.38%
Plants	Host-Associated → Plants	20.77%
Mammals	Host-Associated → Mammals	10.77%
Human	Host-Associated → Human	1.54%
Solid Waste	Engineered → Solid Waste	0.77%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	27.69%
Soil	Environmental → Terrestrial → Soil	23.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.54%
Digestive System	Host-Associated → Mammals → Digestive System	10.77%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.46%
Freshwater	Environmental → Aquatic → Freshwater	6.92%
Sediment	Environmental → Aquatic → Sediment	4.62%
Cave	Environmental → Terrestrial → Cave	1.54%
Digestive System	Host-Associated → Human → Digestive System	1.54%
Unclassified	Environmental → Aquatic → Unclassified	0.77%
Aquaculture	Environmental → Aquatic → Aquaculture	0.77%
Roots	Host-Associated → Plants → Roots	0.77%
Landfill	Engineered → Solid Waste → Landfill	0.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	16.92%
Foregut	Host-Associated → Mammals → Digestive System → Foregut	10.77%
Oceanic	Environmental → Aquatic → Marine → Oceanic	10.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.23%
Loam	Environmental → Terrestrial → Soil → Loam	6.15%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	5.38%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.62%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.62%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	3.85%
Unclassified	Environmental → Aquatic → Marine → Unclassified	3.85%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.85%
Lake	Environmental → Aquatic → Freshwater → Lake	3.08%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.08%
Coastal	Environmental → Aquatic → Marine → Coastal	2.31%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.31%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	1.54%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	1.54%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	1.54%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	0.77%
Sediment	Environmental → Aquatic → Marine → Sediment	0.77%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified	0.77%
Unclassified	Environmental → Aquatic → Aquaculture → Unclassified	0.77%
Clay	Environmental → Terrestrial → Soil → Clay	0.77%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.77%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified	0.77%

Habitat	Taxonomy	Distribution
Rumen	Host-Associated → Mammals → Digestive System → Foregut → Rumen	10.77%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.23%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	6.15%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.38%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.62%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.62%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.62%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	3.85%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	3.85%
Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment	3.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.85%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	3.08%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	2.31%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	2.31%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.31%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	1.54%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	1.54%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.77%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	0.77%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	0.77%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	0.77%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.77%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	0.77%
Diffuse Flow	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow	0.77%
Black Smokers	Environmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers	0.77%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	0.77%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified → Unclassified	0.77%
Unclassified	Environmental → Aquatic → Aquaculture → Unclassified → Unclassified	0.77%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.77%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.77%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.77%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.77%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.77%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified → Unclassified	0.77%

Habitat	Taxonomy	Distribution
Rumen	Host-Associated → Mammals → Digestive System → Foregut → Rumen → Rumen	8.46%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	5.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.62%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.62%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.85%
Marine Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment	3.08%
Marine Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment	3.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.08%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	3.08%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	2.31%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	2.31%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	2.31%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.31%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	2.31%
Mangrove Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Mangrove Sediment	2.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.31%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.54%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	1.54%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.54%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	1.54%
Cattle And Sheep Rumen	Host-Associated → Mammals → Digestive System → Foregut → Rumen → Cattle And Sheep Rumen	1.54%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.54%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.54%
Anoxic Lake Water	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Lake Water	0.77%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	0.77%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	0.77%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.77%
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	0.77%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	0.77%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	0.77%
Mangrove Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment → Mangrove Sediment	0.77%
Enviromental	Environmental → Aquatic → Marine → Unclassified → Unclassified → Enviromental	0.77%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.77%
Marine Sediment	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine Sediment	0.77%
Hydrothermal Vent Fluids	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Hydrothermal Vent Fluids	0.77%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers → Hydrothermal Vents	0.77%
Marine Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment	0.77%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	0.77%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.77%
Water	Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Water	0.77%
Aquarium Water	Environmental → Aquatic → Aquaculture → Unclassified → Unclassified → Aquarium Water	0.77%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.77%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.77%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.77%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.77%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.77%
Bio-Ooze	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze	0.77%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.77%
Camel Rumen	Host-Associated → Mammals → Digestive System → Foregut → Rumen → Camel Rumen	0.77%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.77%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.77%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.77%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.77%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.77%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.77%
Landfill Leachate	Engineered → Solid Waste → Landfill → Unclassified → Unclassified → Landfill Leachate	0.77%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2088090015	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
2166559006	Grass soil microbial communities from Rothamsted Park, UK - FI (heavy metals 2g/kg) assembled	Environmental	Open in IMG/M
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000044	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis soil old	Host-Associated	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000385	Marine microbial community from Cabo Rojo, Puerto Rico - PR CR 10% Liquid 1	Environmental	Open in IMG/M
3300000858	Soil microbial communities from Great Prairies - Wisconsin Native Prairie soil	Environmental	Open in IMG/M
3300001687	Deep Marine Sediments WOR-3-8_10	Environmental	Open in IMG/M
3300001960	Marine microbial communities from South of Charleston, South Carolina, USA - GS014	Environmental	Open in IMG/M
3300002155	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX- M7	Host-Associated	Open in IMG/M
3300002231	Marine sediment microbial communities from Santorini caldera mats, Greece - red mat	Environmental	Open in IMG/M
3300002488	Marine viral communities from the Pacific Ocean - ETNP_2_60	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300002597	Camel rumen microbial communities from Jandagh-Isfahan, Iran - Sample 1	Host-Associated	Open in IMG/M
3300003142	Marine sediment microbial communities from deep subseafloor - Sample from 5.1 mbsf	Environmental	Open in IMG/M
3300003885	Black smoker hydrothermal vent sediment microbial communities from the Guaymas Basin, Mid-Atlantic Ridge, South Atlantic Ocean - Sample 1	Environmental	Open in IMG/M
3300003911	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300004022	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D1	Environmental	Open in IMG/M
3300004074	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - White_ThreeSqA_D1	Environmental	Open in IMG/M
3300004186	Groundwater microbial communities from aquifer - Crystal Geyser CG18_big_fil_WC_8/21/14_2.50	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004799	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004803	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005086	Microbial Community from Halfdan Field MHDA3	Environmental	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006577	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006752	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006919	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21	Environmental	Open in IMG/M
3300006929	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG	Environmental	Open in IMG/M
3300007963	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (version 2)	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009488	Deep subsurface microbial communities from Indian Ocean to uncover new lineages of life (NeLLi) - Sumatra_00607 metaG	Environmental	Open in IMG/M
3300009506	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_8	Environmental	Open in IMG/M
3300009790	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT10 Metagenome	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010319	Anoxic lake water microbial communities from Lake Kivu, Rwanda to study Microbial Dark Matter (Phase II) - Lake Kivu water 275m metaG	Environmental	Open in IMG/M
3300010412	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_10	Environmental	Open in IMG/M
3300010413	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_9	Environmental	Open in IMG/M
3300011412	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT620_2	Environmental	Open in IMG/M
3300012022	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C6	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012952	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 4 Metagenome	Environmental	Open in IMG/M
3300013101	Subseafloor sediment microbial communities from Guaymas Basin, Gulf of California, Mexico - Guay4, Core 4569-4, 0-3 cm	Environmental	Open in IMG/M
3300013127 (restricted)	Sediment microbial communities from Lake Kivu, Rwanda - Sediment site 48cm	Environmental	Open in IMG/M
3300014203	Groundwater microbial communities from an aquifer near a municipal landfill in Southern Ontario, Canada - Pumphouse #3_1 metaG	Environmental	Open in IMG/M
3300014913	Subseafloor sediment microbial communities from Guaymas Basin, Gulf of California, Mexico - Guay1, Core 4569-9, 0-3 cm	Environmental	Open in IMG/M
3300014965	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - T2	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017951	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019458	Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaG	Environmental	Open in IMG/M
3300019875	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2	Environmental	Open in IMG/M
3300019884	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s2	Environmental	Open in IMG/M
3300020171	Groundwater microbial communities from the Olkiluoto Island deep subsurface site, Finland - KR11_0.1 MetaG	Environmental	Open in IMG/M
3300020439	Marine microbial communities from Tara Oceans - TARA_B100001939 (ERX556062-ERR599029)	Environmental	Open in IMG/M
3300020473	Marine microbial communities from Tara Oceans - TARA_B100000700 (ERX555932-ERR598948)	Environmental	Open in IMG/M
3300021400	Sheep rumen microbial communities from New Zealand - Tag 1265 SPADES assembly	Host-Associated	Open in IMG/M
3300021431	Sheep rumen microbial communities from New Zealand - Tag 1435 SPADES assembly	Host-Associated	Open in IMG/M
3300021791	Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Daikoku_FS921 150_kmer	Environmental	Open in IMG/M
3300021960	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9D	Environmental	Open in IMG/M
3300022167	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (v2)	Environmental	Open in IMG/M
3300022226	Sediment microbial communities from San Francisco Bay, California, United States - SF_May12_sed_USGS_13	Environmental	Open in IMG/M
3300025132	Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes)	Environmental	Open in IMG/M
3300025825	Groundwater microbial communities from aquifer - Crystal Geyser CG18_big_fil_WC_8/21/14_2.50 (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025970	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - White_ThreeSqA_D1 (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027814	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-3-8_10 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027835	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW60B uncontaminated upgradient, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027917	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes)	Environmental	Open in IMG/M
3300028591	Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1770 DNA GHGhigh gp2	Host-Associated	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300028603	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 138R	Engineered	Open in IMG/M
3300028797	Bovine rumen microbial communities from tropical cattle in Woodstock, Queensland, Australia - Gonzalo_04	Host-Associated	Open in IMG/M
3300028832	Bovine rumen microbial communities from tropical cattle in Woodstock, Queensland, Australia - Gonzalo_01	Host-Associated	Open in IMG/M
3300028914	Bovine rumen microbial communities from tropical cattle in Woodstock, Queensland, Australia - Gonzalo_03	Host-Associated	Open in IMG/M
3300029174	Aquariaum water viral communities from Chicago, USA - Amazon Rising - AZ1	Environmental	Open in IMG/M
3300029319	Marine viral communities collected during Tara Oceans survey from station TARA_032 - TARA_A100001516	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031565	Soil microbial communities from Risofladan, Vaasa, Finland - UN-2	Environmental	Open in IMG/M
3300031576	Biofilm microbial communities from Wishing Well Cave, Virginia, United States - WW16-25	Environmental	Open in IMG/M
3300031998	Bovine rumen microbial communities from tropical cattle in Woodstock, Queensland, Australia - Gonzalo_03 (v2)	Host-Associated	Open in IMG/M
3300032053	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_16	Environmental	Open in IMG/M
3300033233	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottom	Environmental	Open in IMG/M
3300033463	Bovine rumen microbial communities from tropical cattle in Woodstock, Queensland, Australia - Gonzalo_04 (v2)	Host-Associated	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.66
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.66
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F062887

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_03042710	2088090014	Soil	MPVRKSKSGYKYGNSGKVYKGKGAKQKAAKQGRAIRASQAKRGK
GPICI_01798770	2088090015	Soil	MPTRKTKGGGYKYGGSGKTYYGKGAKAKANKQGRAIRASQHKKK
FI_00914990	2166559006	Grass Soil	MPVRKVGGGYRYGSKGKLYRGKGAKAKAAKQGRAIQVNKKH
deepsgr_01502540	2199352025	Soil	MPVQKSKGGYKYGRSGKTYRGKGAKAKAAKQGRAIQASKAKR
ICChiseqgaiiDRAFT_089915312	3300000033	Soil	MPTRKTKGGGYKYGGSGKTYYGKGAKAKANKQGRAIRASQHKKK*
ARSoilOldRDRAFT_0102591	3300000044	Arabidopsis Rhizosphere	MSPVRKSGGGYKYGSGGKLYKGKGAKAKAAKQGRAIKASQ
INPhiseqgaiiFebDRAFT_1019677125	3300000364	Soil	MPVRKSKSGYKYGNSGKVYKGKGAKQKAAKQGRAIRASQAKRGK*
INPhiseqgaiiFebDRAFT_1058690282	3300000364	Soil	MPVRKTSGGYRYGKKGKLYKGKGAKAKATKQGRAIQASKAKRGKN*
PR_CR_10_Liq_1_inCRDRAFT_10354851	3300000385	Enviromental	KSGYKWGKSGKCYTSNGKKKAARQGRAIKASMSRRK*
JGI10213J12805_100890931	3300000858	Soil	MPVRKSGSGYKYGNEGKLYKGKGAKKKAAKQGRAI
WOR8_1000051271	3300001687	Marine Sediment	MPVQKSGSGYRYGTKGKTYRGKGAKAKAKRQGRAIKASQARQGKSKK*
GOS2230_10413652	3300001960	Marine	MPVMKSGRGYKYGTSGKTYKGQGAKKKAAKQGLAIQASKRRKRLKG*
JGI24033J26618_10196433	3300002155	Corn, Switchgrass And Miscanthus Rhizosphere	MPVRKHKGGYKYGNXGKLYKGKGAKAKATKQGRAIQASKRARDQKK*
KVRMV2_1016737431	3300002231	Marine Sediment	MSYRLMPVRKVGSNKYQYGTHGKVYSGSGAKAKAAKQGRAIQTSKHKGKK*
JGI25128J35275_100038315	3300002488	Marine	MPVMKSGRGYKYGTSGKTYKGKGAKKKATKQGLAIKSSQRRKRLKG*
C688J35102_1204814651	3300002568	Soil	MPVKKTSGGGYKYGSSGKEYKGKGAKQKAAKQGRAIQASKKRKF*
DRAFT_1004505147	3300002597	Camel Rumen	MPVKRTKGGGYRYGTKGKTYYGKGAKAKAEKQGRAIKANQARRKK*
Ga0052242_10156853	3300003142	Marine Sediment	MPVQKAKGGYRYGRSGKVYRGKGAKKKAARQGRAIKVSQARRRKRKS*
Ga0063294_106566121	3300003885	Hydrothermal Vents	MPVIKTKGGAKYGKGGKLYKGKGAVSRAKRQGRAIEASKHRKKKM*
JGI25405J52794_100576371	3300003911	Tabebuia Heterophylla Rhizosphere	RKVKGGYQYGSSGKVYKGKGAKSRARKQGKAIRASQTRQKKKM*
Ga0055432_100164574	3300004022	Natural And Restored Wetlands	MPVTKTRGGGYKYGRSGKTYYGKSAKAKATKQGRAINASKHGKK*
Ga0055518_100081623	3300004074	Natural And Restored Wetlands	MPVKQCSGGHKFGNKGKCYKGKGSKAKAARQGRAIKASQAKRGK*
Ga0066647_103568681	3300004186	Groundwater	VPVHKSGGGYKFGSHGKIYRGKGAKAKAARQGRAIQASKRLSKKR*
Ga0063356_1008035411	3300004463	Arabidopsis Thaliana Rhizosphere	MPVHKVGTGYQYGKSGKLYKGKDAKAKAEKQGRAIQVSKARQRKAGKT*
Ga0062595_1000466883	3300004479	Soil	MPVRKTGGGYRYGKKGKLYKGKGAKAKATKQGRAIQASKAKRAKS*
Ga0058863_117660831	3300004799	Host-Associated	PVRKTGGGYKYGSKGKLYRGKGAKAKAARQGRAIQASKHRKGKK*
Ga0058862_103300563	3300004803	Host-Associated	MPVRKTGGGYKYGSKGKLYRGKGAKAKAARQGRAIQASKHRKGKK*
Ga0072334_100159831	3300005086	Water	MPVKCTKSGCRYGKKGKLYKGKTAKAKASRQGRAIKASQNKK*
Ga0066814_101053462	3300005162	Soil	VKRKQGRSGCVMPVRKSGSGYKYGNKGKTYHGKGAKAKAAKQGRAIQASKHRKGNK*
Ga0070683_1001088962	3300005329	Corn Rhizosphere	MMPVRKSGGGYKYGKSGKVYKGKGAKAKAAKQGRAIQASKHKKRS*
Ga0070711_1000378747	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VPVKKTSGGGYKFGPTGKEYKGKGAKQKATKQGRAIQASKRARGK*
Ga0070681_101198283	3300005458	Corn Rhizosphere	MPVRKTGGGYKYGTKGKLYRGKGAKAKAARQGRAIQASKHRKKK*
Ga0073909_1000154610	3300005526	Surface Soil	MPVRKSKGGYKYGTTGKVYHGKGAKGRAAKQGRAIKANQNKK*
Ga0066903_1047141582	3300005764	Tropical Forest Soil	MPVHKAKGGYQYGGKGKVYHGKGAKAKAARQGRAIKASQHKGKGK*
Ga0068863_1000090211	3300005841	Switchgrass Rhizosphere	MPVRKSGGGYKYGKSGKVYKGKGAKAKAAKQGRAIQASKHKKR*
Ga0075365_109438443	3300006038	Populus Endosphere	MPVRKNKGGYQFGDTGKIYRGKGAKGKAAKQGRAIQASKRARGKK*
Ga0075422_105585762	3300006196	Populus Rhizosphere	GWIGGGMPVRKVKGGYQYGSSGKVYHGKGAKSRAKKQGRAIKANQNKKRQ*
Ga0074050_105214482	3300006577	Soil	MPVKKSGGGYKFGSKGKLYTGKGAKAKAARQGRAIKASQARRAKGGT*
Ga0098048_10355143	3300006752	Marine	MPVRKVRGGFRFGSKGKVYHGKGARKKAVRQGRAIKARKHRK*
Ga0070749_1000561810	3300006802	Aqueous	MPVKKVDGGYRWGEAGKLYTGAMAAQKAAKQGRAIKASQAKRKPKK*
Ga0075434_1005055313	3300006871	Populus Rhizosphere	MPVRKVKGGYQYGSSGKVYHGKGAKSRAKRQSRAIKANQNKKK*
Ga0075434_1019563312	3300006871	Populus Rhizosphere	MPIRKAKGGYQYGSGGKVYRGKGAKAKAAKQGRAIKANQKKRK*
Ga0070746_104250391	3300006919	Aqueous	MPVTKAKGGYRYGTKGKTYRGKGAKAKATKQGRAIKASQKGRKY*
Ga0098036_10038415	3300006929	Marine	MPVRKVRGGFRFGGKGKVYHGKGARKKAVRQGRAIKARQNRK*
Ga0110931_10083322	3300007963	Marine	MPVRKVRGGFRFGSKGKVYHGKGARKKAVRQGRAIKARQNRK*
Ga0111539_112135442	3300009094	Populus Rhizosphere	MPVRKVKGGYQYGSSGKVYHGKGAKSRAKKQGRAIKANQNKKRQ*
Ga0111538_110751953	3300009156	Populus Rhizosphere	MPVKKTPGGGYKYGSKGKTYKGAGAKEKAAKQGRAIKASQAKRKK*
Ga0105242_106260132	3300009176	Miscanthus Rhizosphere	MPVRKTKGGYQWGSSGKNYKGKGAKAKAAKQGRAIKASQNKK*
Ga0105242_122528022	3300009176	Miscanthus Rhizosphere	MPVRKTKGGYQWGSSGKNYKGKGAKAKAAKQGRAIKANQGKK*
Ga0105242_123538482	3300009176	Miscanthus Rhizosphere	MPVRKTKGGYQWGSSGKNYKGKDAKVKAAKQGRAIKANQGKK*
Ga0114925_103170343	3300009488	Deep Subsurface	MPVRRSGKGYQYGESGKVYTGPGAKAKAEKQGRAIKHSQTRQAKKKK*
Ga0118657_103583603	3300009506	Mangrove Sediment	MPVRKVPGGGYKYGSTGKTYHGKDAKAKAARQGRAIEASKHSKGKKK*
Ga0115012_114459661	3300009790	Marine	MPVMKSGRGYKYGTSGKTYKGKGAKKKAAKQGLAIKSSQRRKRLKG*
Ga0126380_117068422	3300010043	Tropical Forest Soil	MPVRRVRGGYRYGRRGKLYRGKGAKAKAARQGRAIE
Ga0136653_104831482	3300010319	Anoxic Lake Water	LPVHKVRGGGYQYGTHGKVYRGAGAEAKAAKQGRAIK
Ga0136852_1000071527	3300010412	Mangrove Sediment	VPIQKCNNGHKYGNTGKCYKGKGSRAKAARQGRAIEASKSKRGR*
Ga0136852_100367992	3300010412	Mangrove Sediment	MPIRKCTGGYKYGKSGKCYKGKDGRQKAARQGRAIEASKASIKKR*
Ga0136851_122846942	3300010413	Mangrove Sediment	MPVEKISGGYRWGKHGKIYRGKGAKAKAAAQGRAIEASKHSKK*
Ga0137424_100001623	3300011412	Soil	MPVKRTKGGGYRYGKKGKTYYGSGAKAKAAKQGRAIKASQKGKGKK*
Ga0120191_100003304	3300012022	Terrestrial	MPVRKTAGGGYQYGTKGKVYKGKGAKAKATRQGKAIKASQNKKK*
Ga0137382_109366612	3300012200	Vadose Zone Soil	MPVKKSGGGYKYGNSGKTYKGKGAKAKAAKQGRAIRANQGKKK*
Ga0150985_1071927971	3300012212	Avena Fatua Rhizosphere	RSQKTMPIRKNKGGYQYGTSGKVYRGKGAKAKAAKQGRAIEASRHSKKK*
Ga0150985_1114337522	3300012212	Avena Fatua Rhizosphere	MPVKKTSGGGYKYGSSGKEYKGKGAKQKATKQGRAIQASKRAR*
Ga0150985_1138009791	3300012212	Avena Fatua Rhizosphere	VPVKKTSGGGYKYGSSGKEYKGKGAKQKAAKQGRAIQASKKRKF*
Ga0150985_1141573229	3300012212	Avena Fatua Rhizosphere	MPVRKNKGGFQYGSSGKVYKGKGAKAKAAKQGRAIQASKHAKK*
Ga0150984_1155795473	3300012469	Avena Fatua Rhizosphere	MPVKKTSGGGYKYGSSGKEYKGKGAKQKAAKQGRAIQASKKKNFKE*
Ga0163180_106749313	3300012952	Seawater	MPVMKSGRGYKYGTSGKTYKGKGAKKKATKQGLAIQASKRRKRLKG*
Ga0164313_104380281	3300013101	Marine Sediment	MPVRCNKAGCKYGTKGKLYKGKGAKAKASRQGRAIKASQ
Ga0164313_106406322	3300013101	Marine Sediment	MAMPVRCNKAGCKYGAKGKLYKGKGAKAKAFKQGRAIKASQARRKK*
Ga0164313_116277632	3300013101	Marine Sediment	AMPVRCNKAGCKYGTKGKLYKGKGAKAKASRQGRAIKASQARRKK*
(restricted) Ga0172365_103486941	3300013127	Sediment	MSPVHKSKGGWQWGRRGKVYRGKGAKARAARQGRAAY
Ga0172378_105491302	3300014203	Groundwater	MPVKKCKGGYKYGSKGKCYKGSGAKSKAKRQGRAIKASKRK*
Ga0164310_101833451	3300014913	Marine Sediment	NEIQQRGVAMPVRCNKAGCKYGTKGKLYKGKGAKAKASRQGRAIKASQARRKK*
Ga0120193_100769052	3300014965	Terrestrial	MPVERVGGGARWGKRGKVYRGKGAAARAKRQGRAIKAAQARRGKRG
Ga0157379_106078232	3300014968	Switchgrass Rhizosphere	MPIRKSGGGYKYGKSGKVYKGKGAKAKAAKQGRAIQASKHKKRS*
Ga0132258_136129542	3300015371	Arabidopsis Rhizosphere	MPVRKAKGGYQYGSSGKVYRGKGAKAKAAKQGRAIKANQKKRK*
Ga0132255_10002915813	3300015374	Arabidopsis Rhizosphere	MPVRKTSGGYQYGKKGKLYKGKGAKAKATKQGRAIQASKAKRAKS*
Ga0181577_100061092	3300017951	Salt Marsh	MPVKKVDGGYRWGESGKLYTGAMAAQKAAKQGRAIKASQAKRKPKK
Ga0184637_1000074210	3300018063	Groundwater Sediment	MPVRRTKGGGYKFGTKGKTYKGKGAKAKAAKQGRAIKASRRGKK
Ga0184629_100072353	3300018084	Groundwater Sediment	MPVRRTKGGGYKFGTKGKTYKGKGAKAKASRQGRAIKANRRGKK
Ga0190271_100236983	3300018481	Soil	MPTKKTPGGGYQYGASGKVYRGKGAKAKADKQGRAIQASKHRRKPKS
Ga0187892_1000199850	3300019458	Bio-Ooze	MPTEKVGTGYRYGKGGKVYRGKGAKAKADRQGRAIQASKARAVRKGSK
Ga0193701_10319003	3300019875	Soil	MPVKKSGGGYKYGSSGKTYKGKGAKGKAAKQGRAIRASQGKKK
Ga0193741_10247112	3300019884	Soil	MPVKRTKGGGYRYGTKGKTYYGKGAKGKASRQGRAIKASQKGKGKK
Ga0180732_10483022	3300020171	Groundwater	MPVHKAKGGWRWGSHGKIYKGKNAKAKAAKQGQAVRASGWKGK
Ga0211558_1000271112	3300020439	Marine	MPVMKSGRGYKYGTSGKTYKGQGAKKKAAKQGLAIQASKRRKRLKG
Ga0211625_100219909	3300020473	Marine	MPVMKSGRGYKYGTSGKTYKGKGAKKKAAKQGLAIQASKRRKRLKG
Ga0224422_1146333632	3300021400	Cattle And Sheep Rumen	MPVQRVDSGYRWGKSGKIYKGKGAKAKAEAQGRAIRASQKRKKR
Ga0224423_1000183547	3300021431	Cattle And Sheep Rumen	MPVRRTKGGGYKYGSKGKTYYGKGAKARAARQGRAIQANKRRKSK
Ga0226832_102297882	3300021791	Hydrothermal Vent Fluids	MPVKKSSGGYKYGSKGKTYRGKGAAAKAAKQGRAVKASQAKRRMR
Ga0222715_104241192	3300021960	Estuarine Water	MPVKKVDGGYRWGEAGKLYTGAMAAQKAAKQGRAIKASQAKRKPKK
Ga0212020_10819144	3300022167	Aqueous	GGYRWGEAGKLYTGAMAAQKAAKQGRAIKASQAKRKPKK
Ga0224512_100602383	3300022226	Sediment	MPIKKVSGGYKYGSKGKTYHGKGAKAKAAKQGRAIKVSQARRGSQRGK
Ga0209232_100127415	3300025132	Marine	MPVMKSGRGYKYGTSGKTYKGKGAKKKATKQGLAIKSSQRRKRLKG
Ga0209232_11200232	3300025132	Marine	MPVMKSGRGYKYGTSGKTYKGKGAKKKAAKQGLAIKSSQRRKRLKG
Ga0210046_12961281	3300025825	Groundwater	VPVHKSGGGYKFGSHGKIYRGKGAKAKAARQGRAIQASKR
Ga0207707_1000026824	3300025912	Corn Rhizosphere	MPVRKTGGGYKYGSKGKLYRGKGAKAKAARQGRAIQASKHRKGKK
Ga0207707_102898322	3300025912	Corn Rhizosphere	MPVRKTGGGYKYGTKGKLYRGKGAKAKAARQGRAIQASKHRKKK
Ga0207644_117033142	3300025931	Switchgrass Rhizosphere	GYKYGNKGKLYKGKGAKKKAQKQGKAIQASKRARTLGHD
Ga0207686_1000110922	3300025934	Miscanthus Rhizosphere	MPVRKTKGGYQWGSSGKNYKGKGAKAKAAKQGRAIKASQNKK
Ga0207686_100278894	3300025934	Miscanthus Rhizosphere	MPVRKTKGGYQWGSSGKNYKGKGAKAKAAKQGRAIKANQGKK
Ga0207661_101389596	3300025944	Corn Rhizosphere	MPVRKSGGGYKYGKSGKVYKGKGAKAKAAKQGRAIQASKHKKRS
Ga0210081_10065533	3300025970	Natural And Restored Wetlands	MPVKQCSGGHKFGNKGKCYKGKGSKAKAARQGRAIKASQAKRGK
Ga0207641_1001130213	3300026088	Switchgrass Rhizosphere	MPVRKSGGGYKYGKSGKVYKGKGAKAKAAKQGRAIQASKHKKR
Ga0209742_101962212	3300027814	Marine Sediment	MPVQKSGSGYRYGTKGKTYRGKGAKAKAKRQGRAIKASQARQGKSKK
Ga0209811_1000008912	3300027821	Surface Soil	MPVRKSKGGYKYGTTGKVYHGKGAKGRAAKQGRAIKANQNKK
Ga0209515_100581881	3300027835	Groundwater	ARAGRITKGGGYKRGGKGKLYKGKGAKAKAARQGRAIRSSEARAGKKRTKGT
Ga0207428_100709247	3300027907	Populus Rhizosphere	MPIRKAKGGYQYGSGGKVYRGKGAKAKAAKQGRAIKANQKKRK
Ga0209536_1009894972	3300027917	Marine Sediment	MPVRKTQGGYKYGTKGKLYKGKTAKAKAARQGRAIKSNQARGKRGC
Ga0209536_1021213942	3300027917	Marine Sediment	MPVKPCSGGHKYGNKGKCYKGKGSKAKAERQGRAVRASQHKKRGKR
Ga0247611_100472014	3300028591	Rumen	MPVRRTKGGGYKYGSKGKTYYGKGAKARAARQGRAIQANKRRRKK
Ga0247611_113258221	3300028591	Rumen	KNQTERIIIMPVRRTKGGGYKYGSKGKTYYGKGAKAKAARQGRAIQANKSRRKKK
Ga0247820_100751851	3300028597	Soil	MPVRKVGGGFRYGSRGKVYRGKGARAKAARQGRAPLPRYT
Ga0265293_104604962	3300028603	Landfill Leachate	MPVKKCKGGYKYGSKGKCYKGSGAKSKAKRQGRAIKASKRK
Ga0265301_100062704	3300028797	Rumen	MPVRRTKSGGYKYGSKGKTYYGKGAKSKAQRQGRAIKASQKRRGK
Ga0265301_100709383	3300028797	Rumen	MPIRKTKSGGYKYGSKGKTYYGKGARKKALRQARAINVSKRKRSR
Ga0265301_108634362	3300028797	Rumen	MPVRKTKSGGYKYGSKGKTYYGRGAKAKAAKQGRAIQASKRKRK
Ga0265298_1000349520	3300028832	Rumen	MPVRRTKSSGYKYSKSGKTYYGKGAKRKAIKQGQAIAISKRKRK
Ga0265298_100552302	3300028832	Rumen	MPVRRTKSGGYRYGTKGKTYYGKGAKAKAAKQGRAIQANKRRKK
Ga0265300_103114772	3300028914	Rumen	MPVRRTKSGGYKYGKSGKTYYGKGAKRKAIKQGQAIAISKRKRK
Ga0168029_1152503	3300029174	Aquarium Water	MPVRKTSGGYKYGNKGKLYKGKGAKAKATKQGRAIRASQAKKK
Ga0183748_100326714	3300029319	Marine	MPVMKSGRGYKYGTSGKTYKGKGAKKKATKQGLAIQASKRRKRLKG
Ga0307497_103899832	3300031226	Soil	MPVRKARGGYRYGSKGKLYKGKGAKAKAAKQGRAIQANKKH
Ga0307379_111678352	3300031565	Soil	MPVKKANGGYKWGKSGKVYHGKNAKTKAAKQGRAIHARKKK
Ga0247727_1000219760	3300031576	Biofilm	MPTEKAGSGYRYGKSGKTYTGKGAKAKADRQGRAIQASKARAAEGKTKR
Ga0310786_100538875	3300031998	Rumen	MSVRRTKSGGYKYGKSGKTYYGKGAKRKAIKQGQAIAISKRKRK
Ga0315284_1000151318	3300032053	Sediment	MPVRKAGGGYRYGTSGKVYRGKGASAKAARQGRAIKASQARRAKKR
Ga0334722_1002471611	3300033233	Sediment	MPIYKITQKGKTGYRYGKHGKVYFGKTAKEKAEKQMRAIYASRARANK
Ga0310690_124724412	3300033463	Rumen	MPVRKVKGGYRYGKTGKTYTGKGAKAKAARQGRAIKASQARRKG
Ga0310690_127431282	3300033463	Rumen	MPIIKTKSGGYKFGKSGKTYFGKNAKNKAIKQMKAIKANQSKRRK

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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