NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F062801

Metagenome / Metatranscriptome Family F062801

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F062801
Family Type Metagenome / Metatranscriptome
Number of Sequences 130
Average Sequence Length 61 residues
Representative Sequence DLWSRGGVESVTAYIEEGENEPSRRLAASLGFTMRGQGRGRSGEPMTVYELLRAVWDRRG
Number of Associated Samples 112
Number of Associated Scaffolds 130

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 7.69 %
% of genes near scaffold ends (potentially truncated) 90.00 %
% of genes from short scaffolds (< 2000 bps) 94.62 %
Associated GOLD sequencing projects 107
AlphaFold2 3D model prediction Yes
3D model pTM-score0.75

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (55.385 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(21.538 % of family members)
Environment Ontology (ENVO) Unclassified
(34.615 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(46.154 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94
1LWAnNN_04027700
22NP_03009630
3JGI10214J12806_101198711
4JGI10214J12806_107750021
5C688J35102_1200486641
6C688J35102_1205587463
7soilH2_104151333
8Ga0063454_1006831312
9Ga0063455_1014588012
10Ga0062590_1002107111
11Ga0062590_1026019611
12Ga0062592_1024708961
13Ga0062594_1020617361
14Ga0066677_107027092
15Ga0066675_113205081
16Ga0070658_115536491
17Ga0066388_1088434262
18Ga0068868_1004020971
19Ga0070668_1016052891
20Ga0070688_1002554691
21Ga0070688_1016213122
22Ga0070703_104279682
23Ga0070662_1011905601
24Ga0070684_1005890861
25Ga0068853_1022127631
26Ga0070693_1014402711
27Ga0070665_1024600151
28Ga0066707_110090961
29Ga0068864_1006219541
30Ga0066903_1088356142
31Ga0070717_106366402
32Ga0068871_1022266301
33Ga0074050_120264611
34Ga0079217_109715561
35Ga0079215_108193691
36Ga0111539_135320122
37Ga0105243_101329604
38Ga0105243_124092112
39Ga0075423_109209791
40Ga0105242_101524794
41Ga0126307_108759351
42Ga0126374_106912122
43Ga0126374_117038912
44Ga0126313_113083611
45Ga0126304_106965442
46Ga0127488_10206122
47Ga0126306_114429412
48Ga0134084_102134141
49Ga0134128_112659712
50Ga0105239_118412671
51Ga0105239_120969362
52Ga0134126_106910091
53Ga0134121_109544842
54Ga0105246_104680651
55Ga0137376_113437911
56Ga0137379_110965671
57Ga0137366_104006481
58Ga0157283_103803781
59Ga0157298_103829882
60Ga0126375_108709533
61Ga0164300_100216403
62Ga0164303_105974573
63Ga0164299_105357491
64Ga0164302_101212513
65Ga0164308_100385902
66Ga0164304_105413272
67Ga0164305_121269352
68Ga0157370_101711941
69Ga0157372_105593001
70Ga0120123_10720242
71Ga0075309_11448491
72Ga0163163_106865562
73Ga0163163_131037342
74Ga0157377_107567063
75Ga0173480_107855002
76Ga0132258_108503054
77Ga0132258_126000324
78Ga0132257_1007067913
79Ga0132257_1009707151
80Ga0132257_1020368411
81Ga0132255_1004352103
82Ga0187788_100688804
83Ga0190272_113432461
84Ga0173481_100553103
85Ga0190264_116666961
86Ga0222622_111462602
87Ga0247751_10948942
88Ga0207642_104783362
89Ga0207699_109449512
90Ga0207705_101789511
91Ga0207663_105127351
92Ga0207694_105860081
93Ga0207694_107445781
94Ga0207659_103489621
95Ga0207687_110801091
96Ga0207687_110988702
97Ga0207690_110926502
98Ga0207690_111973291
99Ga0207706_108164531
100Ga0207669_114737701
101Ga0207661_101457773
102Ga0207661_105568651
103Ga0207679_102177724
104Ga0207679_105932352
105Ga0207668_110486792
106Ga0207658_114286512
107Ga0207683_110606823
108Ga0207698_113187732
109Ga0307311_101104731
110Ga0307319_101231152
111Ga0307280_101751131
112Ga0307288_100540862
113Ga0307305_101327561
114Ga0307292_105042621
115Ga0247825_110954741
116Ga0307296_100721571
117Ga0307296_102933152
118Ga0307310_101716282
119Ga0307310_104644391
120Ga0307286_103578302
121Ga0307300_100742391
122Ga0307304_102650091
123Ga0307502_100406291
124Ga0307500_100903451
125Ga0307468_1006876002
126Ga0308175_1003604151
127Ga0308173_104570451
128Ga0247829_106741381
129Ga0364929_0067734_887_1090
130Ga0314780_016758_27_227
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 25.00%    β-sheet: 25.00%    Coil/Unstructured: 50.00%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

51015202530354045505560DLWSRGGVESVTAYIEEGENEPSRRLAASLGFTMRGQGRGRSGEPMTVYELLRAVWDRRGSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.75
Powered by PDBe Molstar

Structural matches with SCOPe domains



 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
55.4%44.6%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Freshwater Sediment
Groundwater Sediment
Soil
Soil
Vadose Zone Soil
Terrestrial Soil
Tropical Forest Soil
Serpentine Soil
Grasslands Soil
Soil
Soil
Agricultural Soil
Sugarcane Root And Bulk Soil
Permafrost
Soil
Hardwood Forest Soil
Soil
Natural And Restored Wetlands
Tropical Peatland
Soil
Tropical Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Sediment
Arabidopsis Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Miscanthus Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Populus Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Corn Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Switchgrass, Maize And Mischanthus Litter
21.5%3.1%3.1%3.1%3.8%3.8%3.8%4.6%4.6%3.1%3.1%6.2%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
LWAnNN_040277002088090013Freshwater SedimentAAEAMEAAIGDLWSRTDAEAITAYIADGDNEPSRRLAAKLGFVVRGKGRGRSAEPMTVYALRRDDWIALARR
2NP_030096302170459020Switchgrass, Maize And Mischanthus LitterADGITAYIAEGENEASRRVAAKLGFAVRGQGRGRSGESMTVYELRRDAWQPGG
JGI10214J12806_1011987113300000891SoilSRAGVESVTAYIEEGENGPSRRLAASLGFTMRSQGRGRFGEPMTVYELLRDVWDRRGD*
JGI10214J12806_1077500213300000891SoilRTDVQTITAYIEDGQNEPSRRVAAKLGFAVRSTGRGRSGEPMTVYTLCRDDWLRRL*
C688J35102_12004866413300002568SoilIGDLWSRAETDCITAYIDEGENEASRRVAAKLGFAVRRQGRGRSGELMTVYELRRDAWQQGG*
C688J35102_12055874633300002568SoilMGVAIGDLWGRTDADCVTAYIGEGQNEVAPRRGQARIRGAWSGRGRSGEPMTVYELRRDVWHRREG*
soilH2_1041513333300003324Sugarcane Root And Bulk SoilIDDLFSRTDVETITAYISDGGNEASRRVAAKLGFSVRGRGHGRSGEPMTVYTLPRDDWLQKRP*
Ga0063454_10068313123300004081SoilSRAETDCITAYIDEGENEASRRVAAKLGFAERGQGRGRSGELMTVYELRRDTWQPGG*
Ga0063455_10145880123300004153SoilAAIDDLWSRTDAQTITAYIEDGRNEPSRRVAAKLGFAVRSRGRGRSGEPMTVYTLCRDDWLRRL*
Ga0062590_10021071113300004157SoilYIEEGENGPSRRLAASLGFTMRSQGRGRFGEPMTVYELLRDVWDRRGD*
Ga0062590_10260196113300004157SoilITAYIEEGANEPSRRLAAKLGFAARGPGRGRSGEPMTVYEVRRDDWLRRGL*
Ga0062592_10247089613300004480SoilRVDVESITAYIEEGENEPSRRLAAKLGFTVRSHGRGRFGEPMTVYELRRDVWDRLGG*
Ga0062594_10206173613300005093SoilDSITAYIEDGENEPSRRLAVKLGFTVRGPGRGRSGEPMTVYELRRDTRHRRDL*
Ga0066677_1070270923300005171SoilMRVAIGDLWRRAGVESVTAYIEEGENEPSRHLAASLGFRVRSQGRGRFGEPMTVYELLREVWDRRGD*
Ga0066675_1132050813300005187SoilMRAAIGDLWGRAEADAITAYIEEGENEASRRVAAKLGFAVRGQGRGRSGEPVTVYELRRDAWQPGG*
Ga0070658_1155364913300005327Corn RhizosphereMEAAIDDLFSRTDVETITAYISDGGNEASRRVAAKLGFSVRGRGHGRSGEPMTVYTLPRDDWLRQRP*
Ga0066388_10884342623300005332Tropical Forest SoilIEEGENEASRRVAAKLGFAVRCQGRGRSGEPMTVYELRRDAWQPGG*
Ga0068868_10040209713300005338Miscanthus RhizosphereVESVTAYIEEGEAEPSRRLAANLGFTVRSQGHGRFGEPMTVYELRRAAWDRRRG*
Ga0070668_10160528913300005347Switchgrass RhizosphereMHAAIGDLWDRTDAESTTAYIEEGDNAASRQLAAKLGFVVRGQGRGRSGEPMTVYELRRDVWQRRGG*
Ga0070688_10025546913300005365Switchgrass RhizosphereTDVETITAYISYGGNEASRRVAAKLGFSVRGRGHGRSGEPMTVYTLPRDDWLRQRP*
Ga0070688_10162131223300005365Switchgrass RhizosphereTDVETITAYISYGGNEASRRVAAKLGFSVRGRGHGRSGELMTVYRLPRDDWLRQRP*
Ga0070703_1042796823300005406Corn, Switchgrass And Miscanthus RhizosphereGIATEAMHAAIGDLWGRADADVITAYIEEGENEASRRVAAKLGFAVRGQGRGRSGEPMAVYELRRDAWQPGG*
Ga0070662_10119056013300005457Corn RhizosphereTEAMEAAIDDLFSRTDIETITAYISDGGNDASRRVAAKLGFSVRGRGHGRAGEPMTVYTLPRDDRLRQRP*
Ga0070684_10058908613300005535Corn RhizosphereITAYISDGGNEASRRVAAKLGFSVRGRGHGRSGEPMTVYTLPRDDWLRQRP*GKRSE*
Ga0068853_10221276313300005539Corn RhizosphereIGDIWGRAGVESLTAYIEEGENEPSRRLAVSLGFKVRGRGRGRFGEPMTVYELRAPEH*
Ga0070693_10144027113300005547Corn, Switchgrass And Miscanthus RhizosphereAAIADLWDRTDAESITAYIEEGDNAASRQLAAKLGFVVRGQGRGRSGEPMTVYELRRDVWQRRGG*
Ga0070665_10246001513300005548Switchgrass RhizosphereITAYISYGGNEASRRVAAKLGFSVRGRGHGRSGELMTVYRLPRDDWLRQRP*
Ga0066707_1100909613300005556SoilQGIATEATRVAIGDVWSRGGVESVTAYIEEGENEPSRRLAASLGFTMRSQGRGRFGEPMTVYELLREVWDRRGD*
Ga0068864_10062195413300005618Switchgrass RhizosphereLFSRTDVETITAYISDGGNEASRRVAAKLGFSVRGRGHGRSGEPMTVYTLPRDDWLRQRP
Ga0066903_10883561423300005764Tropical Forest SoilAAIDDLWSRTDVQTITAYIEDGRNEPSRRVAAKLGFAVRSTGRGRSGEPMTVYTLRRDDRPRRL*
Ga0070717_1063664023300006028Corn, Switchgrass And Miscanthus RhizosphereDDLWGRTDVDCVTAYIGEGQNEASRRVAAKLGFAVRGPGRGRSGEPMTVYELRRDVWHRREG*
Ga0068871_10222663013300006358Miscanthus RhizosphereRAGVESLTAYIAVGGNEPSCRLAAGLGFTVRGPGRGRFGEPMTVYELRRDTVET*
Ga0074050_1202646113300006577SoilTAYIEEGDNAASRQLAAKLGFVVRGQGRGRSGEPMTVYELRRDVWQRRGG*
Ga0079217_1097155613300006876Agricultural SoilLWRRAGVESVTAYIEEGENEPSRHLAASLGFRVRSQGRGRFGEPMTVYELLREVWDRRGD
Ga0079215_1081936913300006894Agricultural SoilDDLWSRSDVQTITAYIEDGQNESSRRVAAKLGFAVRSTARGRSGEPTTVYALCRDDWLRRL*
Ga0111539_1353201223300009094Populus RhizosphereIATEAMRVAIGDLWSRGGVESVTAYIEEGEAEPSRRLAANLGFTVRSQGHGRFGEPMTVYELRRAAWDRRRG*
Ga0105243_1013296043300009148Miscanthus RhizosphereLFSRTDVETITAYISDGGNEASRRVAAKLGFSVRSRGHGRSGEPMTVYTLPRDDWLRQRP
Ga0105243_1240921123300009148Miscanthus RhizosphereLFSRTDVETITAYISDGGNEASRRVAAKLGFSVRGRGHGRAGEPMTVYTLPRDDRLRQRP
Ga0075423_1092097913300009162Populus RhizosphereLATEAMRAAISDVWGRAEADAITAYIEEGENEASRRVAAKLGFAVRGQGRGRSGEPVTVYELRRDAWQPGG*
Ga0105242_1015247943300009176Miscanthus RhizosphereSRTDVQTITAYIEAAQNEPSRRVAAKLGFAVRNTGRGRSGEPMTVYELRRDVWHRRGG*
Ga0126307_1087593513300009789Serpentine SoilGVESVTAYIEEGENEPSRHLAASLGFRVRSHGRGRFGEPMTVYELLRDVWDRRGD*
Ga0126374_1069121223300009792Tropical Forest SoilAYIEDEENVPSRRLAAKLGFAVRGKGRGRRGEPMTVYALRRDDWQRQP*
Ga0126374_1170389123300009792Tropical Forest SoilNEGIAAEAMEAAIDDLWSRTDFESITAYIEDGENEPSRRLAAKLGFAVRGKGRGRSGEPMTVYALRRDDWLRRP*
Ga0126313_1130836113300009840Serpentine SoilATEAMEAAIDELFSRTDVETITAYISDGGNEASRRVAAKLGFSVRGRGHGRSGEPMTVYTLPRDDWLRQRP*
Ga0126304_1069654423300010037Serpentine SoilIDDLFSRTDVETITAYISDGGNEASRRVAAKLGFSVRGRGHGCSGEPMTVYTLPRDDWLRQRP*
Ga0127488_102061223300010122Grasslands SoilMRVAIGDLWSRAGVESVTAYIEEGENEPSRHLAASLGFTMRSQGRGRFGEPMTVYELLREVWDRRGD*
Ga0126306_1144294123300010166Serpentine SoilRRAGVESVTAYIEEGENEPSRHLAASLGFRVRSHGRGRFGEPMTVYELLREIWDRRED*
Ga0134084_1021341413300010322Grasslands SoilENRRNQRIATEAMRVAIADLWGRAGVESVTAYIEEGENEPSRHLAASLVFRVRSQGRGRFGEPMTVYELLREVWDRRGD*
Ga0134128_1126597123300010373Terrestrial SoilTAYIEEGENEASRRVAAKLGFAVRGRGRGRSGEPMTVYELRRDASEPAG*
Ga0105239_1184126713300010375Corn RhizosphereEAVIDDLWSRTGAEAITAYIEDGENEPSRRLAARLGFAVRGKGRGRSGEPMTVYALRRDDWLRRP*
Ga0105239_1209693623300010375Corn RhizosphereLWGRADADGITAYIEESANEASRRVAAKLGFAVRGRGRGRSGEPMTVYELRRDAWKPAG*
Ga0134126_1069100913300010396Terrestrial SoilAIGDLWSRAGVESMTAYIEEGENESSRRLAANLGFTVRGNGRGRFGEPMTVYELRRDVWDRPGG*
Ga0134121_1095448423300010401Terrestrial SoilMHAAIGDLWDRTDAESITAYIEEGDNAASRQLAAKLGFVVRGQGRGRSGEPMTVYELRRDVWQRRGG*
Ga0105246_1046806513300011119Miscanthus RhizosphereRTDVETITAYISDGGNEASRRVAAKLGFSVRGRGHGRSGEPMTVYTLPRDDWLRQRP*
Ga0137376_1134379113300012208Vadose Zone SoilMRVAIGDLWSRAGVKSVTAYIEEGENEPSRHLAASLGFTMRSQGRGRFGEPMTVYELLREVWDRRGD*
Ga0137379_1109656713300012209Vadose Zone SoilVRENQRNQRIATAAMRVAICDLWSRAGVESVTAYIEEGEKEPSRRLAASLGFTMRSQGRGRFGEPM
Ga0137366_1040064813300012354Vadose Zone SoilRENRRNQRIATEAMRVAIGDLWRRAGVESVTAYIEEGENEPSRHLAASLGFTMRSKGRGRFGEPMTVYELLRDVWDRRGD*
Ga0157283_1038037813300012907SoilIGDLWGRAGVESVTAYIEERENEPSRRLAASLGFTMRSRGRGRFGEPMTVYELRRDGWNCRGG*
Ga0157298_1038298823300012913SoilMEAAIDDLFSRTDIETITAYISDGGNEASRRVAAKLGFSVRGRVHGRAGEPMTVYTLPRDDWLRQRP*
Ga0126375_1087095333300012948Tropical Forest SoilDADHITAYIDDGQNDPSHRLAAKLGFTVRGKGRGRSGAPMTVFELRRDVWHRRRT*
Ga0164300_1002164033300012951SoilDLWSRTDVHTITAYIEAAQNEPSRRVAAKLGFVVRGQGRGRSGEPMTVYELRRDVWQRRGG*
Ga0164303_1059745733300012957SoilMQAAVADLWTRTDVDSITAYIEDGENEPSRRLAVKLGFTVRGPGRGRSGEPMTVYELRRDTRHRR
Ga0164299_1053574913300012958SoilITAYIEAVQNEPSRRVAAKLGFAVRSTGRGRSGEPMTVYTLCRDDWLRRL*
Ga0164302_1012125133300012961SoilGVESLTAYIEEGENEPSRRLAVRLGFKVRGRGRGRFGEPMTVYELRRT*
Ga0164308_1003859023300012985SoilDRTDAESITAYIEEGDNAASRQLAAKLGFVVRGQGRGRSGEPMTVYELRRDVWQRRGG*
Ga0164304_1054132723300012986SoilAIRDVWGRAGVESLTAYIEEGENEPSRRLAVSLGFKVRGRGRGRFDEPMTVYELRRTRALGWASAPE*
Ga0164305_1212693523300012989SoilWTRNDVDSITAYIEDGENEPSRRLAVKLGFTVRGPGRGRSGEPMTVYELRRDRRDL*
Ga0157370_1017119413300013104Corn RhizosphereIEEGENEASRRVAAKLGFAVRGQGRGRSGEPMTVYELRRDAWQPGG*
Ga0157372_1055930013300013307Corn RhizosphereIDDLWSRTDVQTITAYIEDGQNEPSRRVAAKLGFAVRSTGRGRSGEPMTVYTLCRADWLRRL*
Ga0120123_107202423300013770PermafrostVTAYIEEGENEPSRRLAASLGFTKRSQGRGRFGEPMTVYELLRDVWDRRGG*
Ga0075309_114484913300014268Natural And Restored WetlandsGIATEAMEAAIDDLWGRTDVESITAYIEEGANEPSRRLAAKLGFAARGPGRGRSGEPMTVYEVRRDDWLRRGL*
Ga0163163_1068655623300014325Switchgrass RhizosphereMHAAIGDLWDRTDAESTTAYIEEGDNAASRQLAAKLGFVVRGKGGGRSGEPMTVYELRRDAWQRRGG*
Ga0163163_1310373423300014325Switchgrass RhizosphereLFSRTDIETITAYISDGGNEASRRVAAKLGFSVRGRGHGRSGEPMMVYTLPRDDWLRQRP
Ga0157377_1075670633300014745Miscanthus RhizosphereDLWGRAGVESVTAYIEERQNEPSRRLAASLGFTMRSRGRGRFGEPMTVYELRRDGWNCRGG*
Ga0173480_1078550023300015200SoilEAMHAAIGDLWSRAETDCITAYIDEGENDASRRVAAKLGFAVRGQGHGRSGEPMTVYELRRDAWQSGG*
Ga0132258_1085030543300015371Arabidopsis RhizosphereIATEAMRAAIGDLWGRAEADGITAYIEEGGNGASRRVAAKLGFAVRGQGRGRSGEPMTVYELRRDAWQPGG*
Ga0132258_1260003243300015371Arabidopsis RhizosphereAGVESLTAYIEEGENEPSRRLAVSLGFRVRGRGRGRFGEPMTVYELRRT*
Ga0132257_10070679133300015373Arabidopsis RhizosphereRTDVQTITAYIEAVQNEPSRRVAAKLGFAVRSTGRGRSGGPMTVYTLCRDDWLRRL*
Ga0132257_10097071513300015373Arabidopsis RhizosphereDGIATEAMEAAIDDLFSRTDVETITAYISDGGREASRRVAAKLGFSVRGRGHGRSGEPMTVYTLPRDDWLRQRP*
Ga0132257_10203684113300015373Arabidopsis RhizosphereDGITAYIEEGGNEASRRVAAKFGFAVRGQGRGRSGEPVTVDELRRDAWQPGG*
Ga0132255_10043521033300015374Arabidopsis RhizosphereSRTDVQTITAYIDEGQNEPSRRVAAKLGFAVRSTGRGRSGELMTVYTLCRDDWLRRL*
Ga0187788_1006888043300018032Tropical PeatlandMHAAISDLWDRTDANCVTAYIEEGDNAASRRLAAKLGFVVRGQGRGRSGEPMTVYELRRDVWHRRGT
Ga0190272_1134324613300018429SoilEIVTAYIEEGANEPSRRLAAKLGFAARGPGRGRSGEPMTVYEVRRDDWLRRGL
Ga0173481_1005531033300019356SoilVQTIAAYIEDGQNEPSRRVAAKLGFAVRSSGRGRSGEPMTVYTLYRDDWLRRL
Ga0190264_1166669613300019377SoilAAMRVAIGDLWSRAGVESVTAYIEEGENEPSRHLAASLGFRVRSQGRGRFGEPMTVYELLREVWDRRGD
Ga0222622_1114626023300022756Groundwater SedimentDLWTRTDVDSITAYIEDGENEPSRRLAVKLGFTVRGPGRGRSGEPMTVYELRRDTRHRRD
Ga0247751_109489423300023069SoilSRTDVQTITAYIEDGQNEPSRRVAAKLGFAVRSTGRGRSGEPMTVYTLCRDDWLRRL
Ga0207642_1047833623300025899Miscanthus RhizosphereMEAAIDDLFSRTDVETITAYISDGGNEASRRVAAKLGFSVRDRGHGRSGEPMTVYTLPRDDWLRQRP
Ga0207699_1094495123300025906Corn, Switchgrass And Miscanthus RhizosphereRAAIGDLWGRAEADSITAYIEEGENEASRRVAAKLGFAVRGQGRGRSGGPMTVYELRRDAWQPSAAAE
Ga0207705_1017895113300025909Corn RhizosphereDLFTRTDVETITAYISDGGNEASRRVAAKLGFSVRGRGHGRSGEPMTVYTLPRDDWLRQR
Ga0207663_1051273513300025916Corn, Switchgrass And Miscanthus RhizosphereRNQGIATEATRVAIGDLWSRGGVESVTAYIEEGENEPSRHLAASLGFRVRSQGRGRFGEPMTVYELLRDIWDRRGD
Ga0207694_1058600813300025924Corn RhizosphereDLFSCTDVGTITAYISDGGNEASRRVADKLGFSVRGRGHGRSGEPMTVYTLPRDDWLRQR
Ga0207694_1074457813300025924Corn RhizosphereSRTDVQTITAYIDEGQNEPSRRVAAKLGFAVRSPGRGRSGEPMTVYTLRRDDWLRRL
Ga0207659_1034896213300025926Miscanthus RhizosphereAAIDDLFSRTDVETITAYISDGGNEASRRVAAKLGFSVRGRGHGRSGEPMTVYTLPRDDWLRQRP
Ga0207687_1108010913300025927Miscanthus RhizosphereTLADLWRRTRVESVVAYISGENEPSRRLAAKLGYQVRGPGHGRSAEPMTVFVLRRP
Ga0207687_1109887023300025927Miscanthus RhizosphereTITAYISDGGNEASRRVAAKLGFSVRGRGHGRSGEPMTVYTLPRDDWLRQRP
Ga0207690_1109265023300025932Corn RhizosphereVESVTAYIEERENEPSRRLAASLGFTMRSRGRGRFGEPMTVYELRRDGWNCRGG
Ga0207690_1119732913300025932Corn RhizosphereLFSRTDIETITAYISDGGNDASRRVAAKLGFSVRGRGHGRSGEPMTVYTLPRDDWLRQRP
Ga0207706_1081645313300025933Corn RhizosphereTEAMEAAIDDLFSRTDIETITAYISDGGNDASRRVAAKLGFSVRGRGHGRAGEPMTVYTLPRDDRLRQRP
Ga0207669_1147377013300025937Miscanthus RhizosphereEAAIDDLFSRTDVETITAYISDGGNEASRRVAAKLGFSVRSRGHGRSGEPMTVYTLPRDDWLRQRP
Ga0207661_1014577733300025944Corn RhizosphereIETITAYISDRGNDASRRVAAKLGFSVRGRGHGRSGEPMTVYTLPRDDWLRQRP
Ga0207661_1055686513300025944Corn RhizosphereGIGSEAMHAAIGDLWDRTDAESITAYIEEGDNAASRQLAAKLGFVVRGQGRGRSGEPMTVYELRRDVWQTRGS
Ga0207679_1021777243300025945Corn RhizosphereTDVETITAYISDGENEASRRVAAKLGFSVRGRGHGRSGEPMTVYTLPREDWLRQRP
Ga0207679_1059323523300025945Corn RhizosphereAYIEEGENEASRRVAAKLGFAVRGRGRGRSGEPMTVYELRRDAWHQGG
Ga0207668_1104867923300025972Switchgrass RhizosphereMHAAIGDLWDRTDAESTTAYIEEGDNAASRQLAAKLGFVVRGQGRGRSGEPMTVYELRRDVWQRRGG
Ga0207658_1142865123300025986Switchgrass RhizosphereGDLWDRTDAESITAYIEEGDNAASRQLAAKLGFVVRGQGRGRAGEPMTVYELRRDVWQRRGG
Ga0207683_1106068233300026121Miscanthus RhizosphereVETDLITAYIADGDHGASRRVAAKLGFTVRGEGRGRSGEPMTVYELRRDAWQPGG
Ga0207698_1131877323300026142Corn RhizosphereEAAIDDLWSRTDARTITAYIEDGRNEPSRRVAAKLGFAVRGPGRGRSGEAMTVYALCRDD
Ga0307311_1011047313300028716SoilDLWSRGGVESVTAYIEEGENEPSRRLAASLGFTMRGQGRGRFGEPMTVYELLRAVWDRRG
Ga0307319_1012311523300028722SoilMRVAIGDLWSRAGVESVTAYIEEGENGPSRRLAASLGFTMRSQGRGRFGEPMTVYELLRDVWDRRGG
Ga0307280_1017511313300028768SoilIGDLWSRGGVESVTAYIEEWENEPSRRLAASLGFTMRGQGRGRFGEPMTVYELLRAVWDRRGG
Ga0307288_1005408623300028778SoilTRIDVDSITAYIEDGENEPSRRLAVKLGFTVRGPGRGRSGEPMTVYELRRDTRHRRDL
Ga0307305_1013275613300028807SoilRGGVESVTAYIEEGENEPSRRLAASLGFTMRGQGRGRSGEPMTVYELLRAVWDRRGG
Ga0307292_1050426213300028811SoilAMRVAIGDLWSRGGVESVTAYIEEGENEPSRRLAASLGFTMRSQGRGRFGEPMTVYELLRDVWDRRGG
Ga0247825_1109547413300028812SoilLWSRAETDCITAYIDEGENQASRRVAANLGFAVRGQGRGRSGEPMTVYELRRDAWQSGG
Ga0307296_1007215713300028819SoilDLWSRGGVESVTAYIEEGENEPSRRLAASLGFTMRGQGRGRSGEPMTVYELLRAVWDRRG
Ga0307296_1029331523300028819SoilGVESVTAYIEEGENEPSRRLAASLGFTMRGQGRGRSGEPMTVYELLRAVWDRRGG
Ga0307310_1017162823300028824SoilAIGDLWSRGGVESVTAYIEEGENEPSRRLAASLGFTMRGQGRGRSGEPMTVYELLRAVWDRRGG
Ga0307310_1046443913300028824SoilAIGDLWSRGGVESVTAYIEEGENEPSRRLAASLGFTMRGQGRGRFGEPMTVYELLRAVWDRRGG
Ga0307286_1035783023300028876SoilSITAYIEEGDNAASRQLAAKLGFVVRGQGRGRSGEPMTVYELRRDVWQRRGG
Ga0307300_1007423913300028880SoilLWSRGGVESVTAYIEEGENEPSRRLAASLGFTMRSQGRGRFGEPMTVYELLRDVWDRRGG
Ga0307304_1026500913300028885SoilTAYIEDGENEPSRRLAVKLGFTVRGPGRGRSGEPMTVYELRRDTRHRRDL
Ga0307502_1004062913300031164SoilEAAIDDLWSRTDVQTITAYIEDGQNEPSRRVAAKLGFAVRSTGRGRSGEPMTVYTLCRDDWLRRL
Ga0307500_1009034513300031198SoilAYIEEGENEPSRHLAASLGFRVRSQGRGRFGEPMTVYELLRDVWDRRGD
Ga0307468_10068760023300031740Hardwood Forest SoilEAMEAAIDDLWSCTDVQTITAYIEDGQNEPSRRVAAKLGFAVRSAGRGRSGEPMTVYTLCRDDWLRRL
Ga0308175_10036041513300031938SoilAESITAYIEEGDNAASRQLAAKLGFVVRGQGRGRSGEPMTVYELRRAVWQRRGG
Ga0308173_1045704513300032074SoilDLWNRAGVESVTAYIEAGKNEPSRRLAASLGFTARSQGRGRFGEPMTVYELLRDVWDGRG
Ga0247829_1067413813300033550SoilRTDVETITAYISDGGNEASRRVAAKLGFSVRGRGHGRSGEPMTVYTLPRDDWLRQRP
Ga0364929_0067734_887_10903300034149SedimentMRVAIGDLWRRAGVESVTAYIEEGENEPSRHLAASLGFRVRSQGRGRFGEPMTVYELLREVWDRRGD
Ga0314780_016758_27_2273300034659SoilMEAAIDDLWRRTDVQTITAYIEDGQNEPSRRVAAKLGFAVRGTGRGRSGEPMTVYTLCRDDWLRRL


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.