Metagenome / Metatranscriptome Family F062737

Overview

Basic Information

• Family ID: F062737
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 130
• Average Sequence Length: 43 residues
• Representative Sequence: VVHTAAEPPNHGRICLAMIGWTRNSRNDERKIVAA
• Number of Associated Samples: 113
• Number of Associated Scaffolds: 130

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 34.62 %
• % of genes near scaffold ends (potentially truncated): 63.85 %
• % of genes from short scaffolds (< 2000 bps): 90.00 %
• Associated GOLD sequencing projects: 108
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (67.692 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (10.769 % of family members)
• Environment Ontology (ENVO): Unclassified (30.000 % of family members)
• Earth Microbiome Project Ontology (EMPO): Host-associated → Plant → Plant rhizosphere (35.385 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 38.10%
  β-sheet: 0.00%
  Coil/Unstructured: 61.90%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 130 Family Scaffolds
PF00549	Ligase_CoA	56.92
PF02629	CoA_binding	20.77
PF08328	ASL_C	3.08
PF01553	Acyltransferase	1.54
PF02782	FGGY_C	0.77
PF01642	MM_CoA_mutase	0.77
PF13180	PDZ_2	0.77
PF08442	ATP-grasp_2	0.77
PF01029	NusB	0.77
PF13344	Hydrolase_6	0.77

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 130 Family Scaffolds
COG0045	Succinyl-CoA synthetase, beta subunit	Energy production and conversion [C]	57.69
COG0074	Succinyl-CoA synthetase, alpha subunit	Energy production and conversion [C]	56.92
COG0015	Adenylosuccinate lyase	Nucleotide transport and metabolism [F]	3.08
COG0458	Carbamoylphosphate synthase large subunit	Amino acid transport and metabolism [E]	1.54
COG0026	Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase)	Nucleotide transport and metabolism [F]	0.77
COG0151	Phosphoribosylamine-glycine ligase	Nucleotide transport and metabolism [F]	0.77
COG1042	Acyl-CoA synthetase (NDP forming)	Energy production and conversion [C]	0.77
COG1884	Methylmalonyl-CoA mutase, N-terminal domain/subunit	Lipid transport and metabolism [I]	0.77

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	67.69 %
Unclassified	root	N/A	32.31 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	67.69 %
Unclassified	root	N/A	32.31 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	67.69 %
Unclassified	root	N/A	32.31 %

Level 4

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.77 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	40.00 %
Unclassified	root	N/A	32.31 %

Level 5

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.77 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	23.85 %
Unclassified	root	N/A	32.31 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.77 %

Level 6

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.77 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.77 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3.08 %
Ferrovales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Ferrovales	1.54 %
Unclassified	root	N/A	32.31 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.77 %

Level 7

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.77 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.77 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.77 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3.08 %
Ferrovaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Ferrovales → Ferrovaceae	1.54 %
Unclassified	root	N/A	32.31 %

Level 8

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.77 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.77 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.77 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3.08 %
Ferrovum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Ferrovales → Ferrovaceae → Ferrovum	1.54 %
Unclassified	root	N/A	32.31 %

Level 9

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.77 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.77 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.77 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3.08 %
Ferrovum myxofaciens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Ferrovales → Ferrovaceae → Ferrovum → Ferrovum myxofaciens	1.54 %
Unclassified	root	N/A	32.31 %

Associated Scaffolds

Scaffold	Taxonomy	Length
2088090008|P3_DRAFT_NODE_260473_len_1005_cov_11_758209	All Organisms → cellular organisms → Bacteria	1055
3300000044|ARSoilOldRDRAFT_c005486	All Organisms → cellular organisms → Bacteria → Proteobacteria	1069
3300000953|JGI11615J12901_11494905	All Organisms → cellular organisms → Bacteria	650
3300001686|C688J18823_10047246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2976
3300001686|C688J18823_11041295	Not Available	519
3300004058|Ga0055498_10008017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1303
3300004062|Ga0055500_10000208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	5232
3300004081|Ga0063454_101104611	Not Available	648
3300004463|Ga0063356_104557732	Not Available	596
3300005168|Ga0066809_10185364	All Organisms → cellular organisms → Bacteria	556

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	76.15%
Host-Associated	Host-Associated	23.85%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	12.31%
Plants	Host-Associated → Plants	23.85%
Terrestrial	Environmental → Terrestrial	63.85%

Category

Habitat	Taxonomy	Distribution
Floodplain	Environmental → Terrestrial → Floodplain	0.77%
Freshwater	Environmental → Aquatic → Freshwater	6.15%
Marine	Environmental → Aquatic → Marine	2.31%
Peat	Environmental → Terrestrial → Peat	0.77%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.46%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.38%
Sediment	Environmental → Aquatic → Sediment	3.85%
Soil	Environmental → Terrestrial → Soil	62.31%

Type

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.38%
Lake	Environmental → Aquatic → Freshwater → Lake	0.77%
Loam	Environmental → Terrestrial → Soil → Loam	7.69%
Sand	Environmental → Terrestrial → Soil → Sand	3.85%
Sediment	Environmental → Aquatic → Freshwater → Sediment	5.38%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.77%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.38%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.08%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.77%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.31%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.77%

Subtype

Habitat	Taxonomy	Distribution
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	8.46%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.62%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	3.08%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.15%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.77%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.31%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.54%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.77%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.77%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.15%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.00%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	5.38%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.38%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.08%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.31%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.77%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.77%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.77%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.77%

Habitat

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	5.38%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.77%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.54%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.77%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.54%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.54%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.77%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.54%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.54%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.77%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.31%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.77%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	3.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.77%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.77%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.54%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.77%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.54%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.77%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.31%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.77%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.15%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	3.08%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.77%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.77%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.77%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.77%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	8.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.08%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	3.08%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.31%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.77%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.54%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.54%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.77%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.54%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.77%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.77%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.38%

Associated Samples

Taxon OID	Sample Name	Habitat Type
2088090008	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P3	Environmental
3300000044	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis soil old	Host-Associated
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental
3300004058	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D1	Environmental
3300004062	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D2	Environmental
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
P3_DRAFT_00913650	2088090008	Soil	MHVVHTAAEPPNQGRMIFAMIGWTSNNRNADRKIVAA
ARSoilOldRDRAFT_0054862	3300000044	Arabidopsis Rhizosphere	PAEPPNQGRICFAMIGWTRNSRNDERKIVAAYGSVATREYGLASV*
JGI11615J12901_114949051	3300000953	Soil	HGRICLAMIGWTRNSRNDERKIVAAYGSVPSREYGRTRV*
C688J18823_100472465	3300001686	Soil	VHTPAEPPNHGRICLAMIGCTRNSRNDERKIVVAYGSVAASG*
C688J18823_110412952	3300001686	Soil	PAEPPNHGRICFAMIGCTRNSRNDERKIVPAYGIVLNSGVRIT*
Ga0055498_100080173	3300004058	Natural And Restored Wetlands	PNHGRICLAMIGWTRNSRNDERKIVAAYGRVAASGARITWA*
Ga0055500_100002084	3300004062	Natural And Restored Wetlands	MHVVHTAAPPPNQGRIRRAISGWTRNSRNDDRKIVTAYSRGAGFRC*
Ga0063454_1011046112	3300004081	Soil	PAEPPNHGRICLAMIGCTRNSRNDERKIVVAYGSVAASG*
Ga0063356_1045577321	3300004463	Arabidopsis Thaliana Rhizosphere	ASSTLWKNTRQVVHTAAEPPNHGRICLAMIGWTRNSRNDERKMVAAYGSVATSG*
Ga0066809_101853642	3300005168	Soil	VFQTPAEPPNHGRICLAMIGWTRNSRNDERKIVAAYGSVATRE*
Ga0065707_100502022	3300005295	Switchgrass Rhizosphere	VVQTPAEPPNHGRICFAMIGWTRNSRNDERKIVAAYGSVATREYGLTSV*
Ga0070680_1011321072	3300005336	Corn Rhizosphere	RQVVHTPAEPPNHGRICLAMIGWTRNSRNDDRKIVPAYGMVLNSGVRIT*
Ga0070701_107677452	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	VHTAAEPPNHGRICLAMIGCTRKSRNDERKIVPAYGSVASRG*
Ga0073909_104777632	3300005526	Surface Soil	KNTRQVVHTAAEPPNHGRICLAMIGWTRNSRNDERKIVAAYGSVATRE*
Ga0070664_1022890062	3300005564	Corn Rhizosphere	PNHGRICLAMIGWTRNSRNDERKIVAAYGSVPSREYGRTRV*
Ga0066903_1085199092	3300005764	Tropical Forest Soil	NHGRICLAMIGWTRNSRNDDRKMVAAYGSVASSGWRIT*
Ga0074470_113085194	3300005836	Sediment (Intertidal)	MQVVHTAAVPPNQGRIWRAISGCTRNNRNEDRKIVAA*
Ga0068862_1003619563	3300005844	Switchgrass Rhizosphere	RMLWKNTRHVVHTAAEPPNHGRICLAMIGCTRNSRKDERKMVAA*
Ga0074059_115907972	3300006578	Soil	VVQTPAEPPNHGRICLAMIGWTRNSRNDERKIVAAYGSVATRE*
Ga0079220_101521463	3300006806	Agricultural Soil	EPPNHGRICLAMIGCTRNSRNDERKIVAAYGSVAASGVRIT*
Ga0075428_1000028656	3300006844	Populus Rhizosphere	VVQTPAEPPNHGRICLAMIGWTRNSRNDERKIVAA*
Ga0075431_1009951002	3300006847	Populus Rhizosphere	QVVHTAAEPPNHGRICLAMIGCTRNSRNEERKIVPA*
Ga0075431_1015979281	3300006847	Populus Rhizosphere	TAAEPPNQGRICLAMIGCTRNSRNDERKIVAAYGSVAASG*
Ga0075433_1000248920	3300006852	Populus Rhizosphere	VVQTPAEPPNHGRICLAMIGWTRNSRNDERKIVAAYGSVPSREYGRTRV*
Ga0075420_1012295352	3300006853	Populus Rhizosphere	NTRQVVHTAAEPPNHGRICLAMIGCTRNSRNDERKIVAAYGSVATSGVRAARV*
Ga0075429_1011107382	3300006880	Populus Rhizosphere	ASSTLWKNTRQVVHTAAEPPNHGRICLAMIGCTRNSRNDERKIVAAYGSVATSGVRAARV
Ga0079216_100299693	3300006918	Agricultural Soil	VVHTPAEPPNQGRICLAMIGWTRNSRNDERKIVAA*
Ga0079216_108049672	3300006918	Agricultural Soil	VVHTAAEPPNHGRICLAMIGWTRNSRNDDRKIVAA*
Ga0099794_100846283	3300007265	Vadose Zone Soil	WKNTRQVAHTAAEPPNHGRICFAMIGCTRNSRNDERKIVAA*
Ga0105095_100548793	3300009053	Freshwater Sediment	VVQTAAEPPNHGRICLAMIGWTRNSRNDERKIVAAYGRVAASGSLAT*
Ga0105106_108381491	3300009078	Freshwater Sediment	NSNRNWKNTRQVVHTAADPPNHGRICFAMTGWTRKSKKALVNIVAA*
Ga0105098_104657202	3300009081	Freshwater Sediment	VVHTAAEPPNQGRICLAMMGWTRNSRNDERNIVAAYGSVASSESGVATE*
Ga0114129_101531175	3300009147	Populus Rhizosphere	VVHTPAEPPNHGRICLAMIGCTRNSRNDDRKIVAAYGSAAASG*
Ga0111538_128829052	3300009156	Populus Rhizosphere	VVHTPAEPPNHGRICLAMIGWTRNSRKDERKIVAA*
Ga0105248_114328211	3300009177	Switchgrass Rhizosphere	AWKNTRQVAQTATLPPKRGRISLAMIGWTRNSRNDERKIVAA*
Ga0105082_10538172	3300009814	Groundwater Sand	VVHTAAEPPNQGRICLAMIGWTRNSRNDDRKIVAAYGSVATSEYRVARV*
Ga0126313_109928822	3300009840	Serpentine Soil	LWKNTRQVVHTPAEPPNHGRICFAMIGCTRNSRNDERKIVPA*
Ga0134084_103875761	3300010322	Grasslands Soil	NTMHVVHTAADPPNHGRICLAMIGCTRNSRNDERKIVAA*
Ga0126378_133861491	3300010361	Tropical Forest Soil	MHVVHTAADPPNHGRINLAKTGWIRNRRNAAKKIADP*
Ga0134123_112121302	3300010403	Terrestrial Soil	AEPPNHGRICLAMIGWTRNSRNDERKIVAAYGSVPSREYGRTRV*
Ga0134123_122731632	3300010403	Terrestrial Soil	AEPPNQGRICLAMIGWTRNSRNDDRKIVPAYGRVASRG*
Ga0137343_10077062	3300012142	Soil	VVQTAAEPPNHGRICLAMIGWTRKSRNDDRKIVAA*
Ga0137344_10828842	3300012159	Soil	VVQTAAEPPNHGRICLAMIGWTRNSRNDERKIVAAYGSVATSEYRVARV*
Ga0137352_11111122	3300012164	Soil	VVQTAAEPPNHGRICLAMIGWTRNSRNDERKIVAA*
Ga0150985_1005044992	3300012212	Avena Fatua Rhizosphere	PNHGRICLAMIGCTRNSRNDERNIVAAYGSVATIG*
Ga0150985_1057623292	3300012212	Avena Fatua Rhizosphere	VVQTPAEPPNQGRICLAMIGWTRNSRNDERKIVAA*
Ga0150984_1196129391	3300012469	Avena Fatua Rhizosphere	EPPNHGRICLAMIGWTRNSRNDERKIVAAYGSVANSEYGLTSV*
Ga0157333_10046222	3300012484	Soil	VVQTPAEPPNHGRICLAMIGWTRNSRNDERKIVAAYGSVATREYGLASV*
Ga0157353_10225352	3300012496	Unplanted Soil	MQVVQTAEVPPNQGRICLAMIGWTRNSRNDERKIVAA*
Ga0157292_100878972	3300012900	Soil	VVHTAAEPPNHGRICLAMIGWTRNSRNDERKVVAAYGSVATRE*
Ga0137404_113463941	3300012929	Vadose Zone Soil	NTRQVVHTAAEPPNHGRICLAMIGWTRNSRNDERKMVAAYGRLASSGKRIT*
Ga0137410_110806292	3300012944	Vadose Zone Soil	MLWKKTRQVVHTAAEPPNHGRICLAMIGWTRNSRNEERKIVAA*
Ga0137410_115295112	3300012944	Vadose Zone Soil	GRICLAMIGCTRNSRNDERKIVAAYGIDPNSGVRIT*
Ga0164302_108323311	3300012961	Soil	VVQTPAEPPNHGRICLAMIGCTRNSRNDERKIVAAYGSVAIRE*
Ga0164302_115890282	3300012961	Soil	NQGRICLAMIGWTRNSRNDDRKIVPAYGRVASRG*
Ga0137409_101660882	3300015245	Vadose Zone Soil	MQVVHTAEVPPNHGRICLAMIGWTRNSRNDERKIVAA*
Ga0132258_117265522	3300015371	Arabidopsis Rhizosphere	VVQTPAEPPNQGRICFAMIGWTRNSRNDERKIVAAYGSVATREYGLASV*
Ga0132258_121747583	3300015371	Arabidopsis Rhizosphere	WKKTRQVVHTPAEPPNHGRICLAMIGCTRNSRNDERKIVAA*
Ga0184626_102254812	3300018053	Groundwater Sediment	VDWKKTRHVVQTAAEPPNHGRICLAMIGWTRNSRNDERKMVAA
Ga0190265_102912563	3300018422	Soil	VVHTAAEPPNHGRICLAMIGWTRNSRNDERKIVAAYGRVAARGRRAT
Ga0190265_126507811	3300018422	Soil	LWKNTRQVVHTAAEPPNHGRICLAMIGWTRNSRNDDRKMVAAYGSVATSG
Ga0190275_124323511	3300018432	Soil	VVHTAAEPPNHGRICLAMIGWTRNSRNDERKMVAAYGSVATSG
Ga0190273_124130292	3300018920	Soil	VVHTPAEPPNHGRICLAMIGYTRNSRNDERKIVAA
Ga0196964_101030151	3300020202	Soil	PAEPPNHGRICLAMIGWTRNSRNDDRKIVPAYGSVAAKVRRAT
Ga0196964_102853132	3300020202	Soil	EPPNHGRICLAMIGWTRNRRNEERKIVAAYGSVASSG
Ga0196964_105109732	3300020202	Soil	PASSTLWKKTRHVVQTAAEPPNHGRICLAMIGWTRNSRNDERKIVAA
Ga0196980_10533042	3300021066	Soil	WKNTRQVVQTAAEPPNHGRICLAMIGCTRNSRNEDRKTVAA
Ga0210380_103258001	3300021082	Groundwater Sediment	VVQTPAEPPNHGRICLAMIGWTRNSRNDERKIVAAYGSVATRE
Ga0210377_103687532	3300021090	Groundwater Sediment	ASSRLWKNTMQVVHTPAEPPNQGRICLAMTGWTRNSRNDERKIVAA
Ga0247680_10105141	3300024246	Soil	HTPAEPPNHGRICLAMIGWTRNSRNDERKIVAAYGSVPSREYGRTRV
Ga0247671_10330092	3300024284	Soil	VVHTAAEPPNHGRICLAMIGWTRNSRNDERKIVPA
Ga0247690_10321741	3300024287	Soil	LVQPITAAEPPNHGRICLAMIGWTRNSRNDERKIVPA
Ga0247667_10180501	3300024290	Soil	TRHVVHTPAEPPNHGRICLAMIGWTRNSRNDERKIVAAYGSVPSREYGRTRV
Ga0247666_10189093	3300024323	Soil	PAEPPNHGRICLAMIGWTRNSRNDERKIVAAYGSVPSREYGRTRV
Ga0209519_101220103	3300025318	Soil	PARSTLWKKTRQVVQTAAEPPNHGRICLAMIGWTRNSRNDERKIVAAYGRVAASGSLAT
Ga0209519_101333252	3300025318	Soil	VVHTPAEPPNHGRICLAMIGWTRNSRNDERKIVAAYGSVAASG
Ga0207642_106560422	3300025899	Miscanthus Rhizosphere	MHVVQTAALPPNQGRMSRAISGCTRKSRNDERNIVAAYGSVATIG
Ga0207647_101473981	3300025904	Corn Rhizosphere	WKNTRQVVQTPAEPPNHGRICLAMIGWTRNSRNDERKIVAA
Ga0207699_108184032	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	TRQVVHTLAEPPNHGRICLAMIGCTRKSRNDERKIVAAYGSVATSG
Ga0207699_113116891	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	VVHTAALPPNHGRISRAISGWTRNSRNDDRKIVAA
Ga0207664_109170621	3300025929	Agricultural Soil	WKKTRQVVHTLAEPPNHGRICLAMIGCTRKSRNDERKIVAAYGSVATSG
Ga0207644_110381931	3300025931	Switchgrass Rhizosphere	VVQTPAEPPNHGRICLAMIGWTRNSRNDERKIVAA
Ga0207669_117840662	3300025937	Miscanthus Rhizosphere	MQVVQTTAVPPNQGRICLARRGWTRKSRKALRKIVAA
Ga0207704_101442561	3300025938	Miscanthus Rhizosphere	MLWKNTRHVVHTAAEPPNHGRICLAMIGCTRNSRNDERKIVAA
Ga0207661_107763052	3300025944	Corn Rhizosphere	QVVQTLAAPPNHGRICFAMIGWTRNSRNDDRKIVAAYGNVAASG
Ga0207679_119127082	3300025945	Corn Rhizosphere	PNHGRICLAMIGWTRNSRNDERKIVAAYGSVPSREYGRTRV
Ga0210090_10064072	3300025965	Natural And Restored Wetlands	SMHVVHTAAPPPNQGRIRRAISGWTRNSRNDDRKIVTAYSRGAGFRC
Ga0208658_10155372	3300026047	Natural And Restored Wetlands	TLWKNTRQVVHTAAEPPNHGRICLAMMGWTRNSRNDERKIVAAYGRVAARGARITWA
Ga0207641_100383592	3300026088	Switchgrass Rhizosphere	VFQTPAEPPNHGRICLAMIGWTRNSRNDERKIVAA
Ga0209808_12971792	3300026523	Soil	AYPASSTLWKKTRQVVHTPAEPPNHGRICLAMIGCTRNSRNDDRKIVPA
Ga0207442_1014582	3300026815	Soil	MQVVHTAALPPNHGRICLAMIGWTRNSRKDERKIVAA
Ga0207603_1008952	3300026820	Soil	VFQTPAEPPNHGRICLAMIGWTRNSRNDERKVVAAYGSVATRE
Ga0209981_10045633	3300027378	Arabidopsis Thaliana Rhizosphere	STLWKKTRQVVHTAAEPPNQGRICLAMIGCTRNSRNDERKIVAA
Ga0209286_10103633	3300027713	Freshwater Sediment	VVQTAAEPPNHGRICLAMIGWTRNSRNDERKIVAAYGRVAASGSLAT
Ga0209177_103132381	3300027775	Agricultural Soil	TRQVVHTPAEPPNHGRICLAMIGCTRNSRNDERKIVAAYGSVAASGVRIT
Ga0209811_100340392	3300027821	Surface Soil	VVHTAAEPPNHGRICLAMIGWTRNSRNEERKIVPA
Ga0209590_109539872	3300027882	Vadose Zone Soil	TRQVVQTPAEPPNQGRICLAMIGWTRNSRNEERKIVPA
Ga0209486_101452012	3300027886	Agricultural Soil	VVQTAAEPPNHGRICLAMIGWTRNSRNDDRKIVAA
Ga0209486_110237651	3300027886	Agricultural Soil	RQVVHTAAEPPNHGRICLAMIGWTRNSRNDDRKMVAAYGNVATSG
Ga0209486_111133801	3300027886	Agricultural Soil	TLWKKTRQVVHTAAEPPNHGRICFAMIGCTRNSRNDERKIVAAYGSVATSE
Ga0209488_110402402	3300027903	Vadose Zone Soil	LWKNTMQVVHTAAEPPNHGRICLAMIGCTRNSRNEERKIVPA
Ga0209705_101064483	3300027979	Freshwater Sediment	KNTRHVVHTAAEPPNHGRICLAMIGWTRNSRNDERKIVAA
Ga0247662_10300782	3300028293	Soil	AYPASSTLWKKTRQVVHTPAEPPNHGRICLAMIGCTRNNRNDERKIVAA
Ga0247823_112057701	3300028590	Soil	LWKNNRQVVHTAAEPPNQGRICLAMIGCTRKSRNEDRKMVAAYGRVATSGVRAASV
Ga0307503_106362801	3300028802	Soil	WKNTMQVVHTPAEPPNQGRICLAITGCTRNSRNDDRKIVAA
Ga0247825_106327141	3300028812	Soil	KKTRQVVHTAAEPPNQGRICLAMIGCTRNSRKDERKIVAAYGSVATRE
Ga0299907_109145382	3300030006	Soil	VVQTPAEPPNQGRICLAMIGCTKNSRNDERKIVAAYGSVASRE
Ga0311349_101867882	3300030294	Fen	VLWKKTRQVVQTAAEPPNHGRICFAMIGWSRNSRNALVKIVRADYSMGGCDR
Ga0307501_102316961	3300031152	Soil	RQVVQTPAEPPNHGRICLAMIGWTRNSRNDERKIVPA
Ga0307495_100616961	3300031199	Soil	QTPAEPPNHGRICLAMIGWTRNSRNDERKIVAAYGSVATREYGLARV
Ga0310888_103268421	3300031538	Soil	WKNTRQVVQTPAEPPNHGRICLAMIGCTRNSRNDERKIVAAYGSVATRE
Ga0310888_106410151	3300031538	Soil	RQVVQTAAEPPNQGRICPAMIGCTRNSRNDERKIVAAYGSVATREYGLARV
Ga0307469_100138931	3300031720	Hardwood Forest Soil	PPNHGRICLAMIGWTRNSRKDERKMVAAYGRLASSGKRIT
Ga0307405_108480692	3300031731	Rhizosphere	VVHTAAEPPNHGRICLAMIGWTRNSRNDERKIVAA
Ga0307410_118011722	3300031852	Rhizosphere	TRQVVHTAAEPPNQGRICLAMIGCTRNSRNDDRKMVAAYGSVATSGVRAASV
Ga0310904_114147681	3300031854	Soil	VVHTAADPPNHGRICFAMIGWTRNSRNDDRKIVPAYGSVASRG
Ga0310893_101596062	3300031892	Soil	MQVVHTAEVPPNHGRICLAMIGWTRNSRNDERKIVAA
Ga0307407_113115662	3300031903	Rhizosphere	PAEPPNQGRICLAMIGWTRNSRNDDRNIVAAYGNVPASE
Ga0310900_112059752	3300031908	Soil	KKTMHVVHTPSEPPNHGRICLAITGCTRNSRNDDRNIVAA
Ga0307416_1038955291	3300032002	Rhizosphere	TLWKKTRHVVQTAAEPPNHGRICLAMIGCTMNSRNDERKIVPAYGSVASNG
Ga0310899_102648721	3300032017	Soil	VVQTPAEPPNQGRICLAMIGCTRNSRNDERKIVAA
Ga0315910_103433152	3300032144	Soil	VVHTPAEPPNHGRICLAMIGWTRNSRNDERKIVAA
Ga0315910_104017882	3300032144	Soil	WKNTLQVVHTPADPPNHGRICLAMTGCTRNSRNDDRNIVAA
Ga0310896_103126612	3300032211	Soil	VHTAAEPPNHGRICLAMIGCTRNSRNDERKIVAAYGSVATREYGLARV
Ga0315271_110480271	3300032256	Sediment	NSMQVVYTAAVPPNQGRICRAINGCTRNSKNEDKKIVAA
Ga0247829_107329032	3300033550	Soil	VVQTAAEPPNQGRICLAMMGWTRNSRNDERNIVAAYGSVASSESGVATE
Ga0247830_106139831	3300033551	Soil	QVVHTPAEPPNHGRICLAMIGWTRNSRNDERKIVAAYGSVASSE
Ga0372946_0025997_2471_2578	3300034384	Soil	VVQTAAEPPNQGRICLAMIGCTRNSRNDERKIVAA
Ga0364941_013753_906_1037	3300034417	Sediment	VVQTPAEPPNHGRICLAMIGWTRNSRNDERKIVAAYGSVATRD
Ga0373958_0175452_2_121	3300034819	Rhizosphere Soil	PAEPPNHGRICLAMIGCTRNSRNDERKIVAAYGSVATRE