Metagenome Family F062626

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F062626
Family Type	Metagenome
Number of Sequences	130
Average Sequence Length	69 residues
Representative Sequence	MKNTNRSDDWRVLCELASKEKDPEKLIDLIVQINQALEESHQKSRYHVNANGYSYSVAPQLSQPAEYDC
Number of Associated Samples	75
Number of Associated Scaffolds	130

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	84.92 %
% of genes near scaffold ends (potentially truncated)	21.54 %
% of genes from short scaffolds (< 2000 bps)	82.31 %
Associated GOLD sequencing projects	68
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.154 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (66.154 % of family members)
Environment Ontology (ENVO)	Unclassified (68.462 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (71.538 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 39.18% β-sheet: 0.00% Coil/Unstructured: 60.82%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 130 Family Scaffolds
PF00072	Response_reg	32.31
PF02518	HATPase_c	13.08
PF00196	GerE	6.92
PF07730	HisKA_3	3.08
PF13426	PAS_9	1.54
PF13493	DUF4118	1.54
PF07519	Tannase	0.77
PF14279	HNH_5	0.77
PF05717	TnpB_IS66	0.77
PF01527	HTH_Tnp_1	0.77
PF02371	Transposase_20	0.77
PF01943	Polysacc_synt	0.77
PF07238	PilZ	0.77
PF13432	TPR_16	0.77
PF13087	AAA_12	0.77
PF07944	Glyco_hydro_127	0.77
PF04041	Glyco_hydro_130	0.77

COG ID	Name	Functional Category	% Frequency in 130 Family Scaffolds
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	3.08
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	3.08
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	3.08
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	3.08
COG2152	Predicted glycosyl hydrolase, GH43/DUF377 family	Carbohydrate transport and metabolism [G]	0.77
COG3436	Transposase	Mobilome: prophages, transposons [X]	0.77
COG3533	Beta-L-arabinofuranosidase, GH127 family	Carbohydrate transport and metabolism [G]	0.77
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.77

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.15 %
Unclassified	root	N/A	3.85 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.15 %
Unclassified	root	N/A	3.85 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.15 %
Unclassified	root	N/A	3.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	63.08 %
Unclassified	root	N/A	3.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.54 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.77 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	60.77 %
Unclassified	root	N/A	3.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.54 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.77 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.77 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	60.77 %
Unclassified	root	N/A	3.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.54 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.77 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.77 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	60.77 %
Unclassified	root	N/A	3.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.54 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.77 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.77 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004479\|Ga0062595_100061026	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1793	Open in IMG/M
3300005171\|Ga0066677_10484251	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	710	Open in IMG/M
3300005172\|Ga0066683_10908018	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300005174\|Ga0066680_10304560	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1017	Open in IMG/M
3300005175\|Ga0066673_10337560	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	880	Open in IMG/M
3300005177\|Ga0066690_10082303	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2037	Open in IMG/M
3300005180\|Ga0066685_10544144	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	801	Open in IMG/M
3300005186\|Ga0066676_10359909	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	975	Open in IMG/M
3300005186\|Ga0066676_10597480	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	748	Open in IMG/M
3300005434\|Ga0070709_10232320	All Organisms → cellular organisms → Bacteria → Proteobacteria	1320	Open in IMG/M
3300005435\|Ga0070714_102198335	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300005436\|Ga0070713_100042961	All Organisms → cellular organisms → Bacteria	3693	Open in IMG/M
3300005450\|Ga0066682_10700958	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	622	Open in IMG/M
3300005556\|Ga0066707_10726585	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	620	Open in IMG/M
3300005569\|Ga0066705_10062532	All Organisms → cellular organisms → Bacteria	2124	Open in IMG/M
3300005576\|Ga0066708_10239270	All Organisms → cellular organisms → Bacteria	1151	Open in IMG/M
3300005586\|Ga0066691_10951238	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300005598\|Ga0066706_10197682	All Organisms → cellular organisms → Bacteria	1542	Open in IMG/M
3300005598\|Ga0066706_10213556	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1487	Open in IMG/M
3300005598\|Ga0066706_10248300	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1384	Open in IMG/M
3300005598\|Ga0066706_11442236	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300006028\|Ga0070717_10494865	All Organisms → cellular organisms → Bacteria	1105	Open in IMG/M
3300006791\|Ga0066653_10287019	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	833	Open in IMG/M
3300006791\|Ga0066653_10412851	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	690	Open in IMG/M
3300009012\|Ga0066710_104524733	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300009038\|Ga0099829_10011375	All Organisms → cellular organisms → Bacteria	5791	Open in IMG/M
3300009088\|Ga0099830_10610679	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	895	Open in IMG/M
3300009089\|Ga0099828_10273706	All Organisms → cellular organisms → Bacteria → Proteobacteria	1516	Open in IMG/M
3300009089\|Ga0099828_10391060	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1254	Open in IMG/M
3300009090\|Ga0099827_10219625	All Organisms → cellular organisms → Bacteria	1588	Open in IMG/M
3300009090\|Ga0099827_10313164	All Organisms → cellular organisms → Bacteria	1329	Open in IMG/M
3300010320\|Ga0134109_10456092	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300011270\|Ga0137391_10450983	All Organisms → cellular organisms → Bacteria → Acidobacteria	1094	Open in IMG/M
3300011270\|Ga0137391_10906640	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	721	Open in IMG/M
3300011271\|Ga0137393_11044623	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	695	Open in IMG/M
3300012096\|Ga0137389_10830080	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	793	Open in IMG/M
3300012198\|Ga0137364_10478358	All Organisms → cellular organisms → Bacteria → Acidobacteria	936	Open in IMG/M
3300012198\|Ga0137364_11077826	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	605	Open in IMG/M
3300012198\|Ga0137364_11111668	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	594	Open in IMG/M
3300012199\|Ga0137383_10317224	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1141	Open in IMG/M
3300012199\|Ga0137383_10329834	All Organisms → cellular organisms → Bacteria	1118	Open in IMG/M
3300012199\|Ga0137383_10384455	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1028	Open in IMG/M
3300012199\|Ga0137383_10400383	All Organisms → cellular organisms → Bacteria	1006	Open in IMG/M
3300012199\|Ga0137383_10924726	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	637	Open in IMG/M
3300012199\|Ga0137383_11121068	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300012201\|Ga0137365_10277449	All Organisms → cellular organisms → Bacteria	1244	Open in IMG/M
3300012201\|Ga0137365_10279181	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1240	Open in IMG/M
3300012201\|Ga0137365_10399298	All Organisms → cellular organisms → Bacteria	1014	Open in IMG/M
3300012204\|Ga0137374_10035600	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5355	Open in IMG/M
3300012205\|Ga0137362_10385485	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1214	Open in IMG/M
3300012205\|Ga0137362_10690258	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	877	Open in IMG/M
3300012206\|Ga0137380_10409857	All Organisms → cellular organisms → Bacteria	1203	Open in IMG/M
3300012206\|Ga0137380_11098815	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	677	Open in IMG/M
3300012206\|Ga0137380_11293500	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	614	Open in IMG/M
3300012207\|Ga0137381_10319236	All Organisms → cellular organisms → Bacteria	1353	Open in IMG/M
3300012207\|Ga0137381_10439656	All Organisms → cellular organisms → Bacteria	1138	Open in IMG/M
3300012207\|Ga0137381_11563156	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300012209\|Ga0137379_10125621	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2465	Open in IMG/M
3300012209\|Ga0137379_10151692	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2226	Open in IMG/M
3300012209\|Ga0137379_10776262	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	863	Open in IMG/M
3300012209\|Ga0137379_10845132	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	820	Open in IMG/M
3300012209\|Ga0137379_11190886	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	668	Open in IMG/M
3300012209\|Ga0137379_11366354	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	612	Open in IMG/M
3300012210\|Ga0137378_10166511	All Organisms → cellular organisms → Bacteria	2047	Open in IMG/M
3300012210\|Ga0137378_10310408	All Organisms → cellular organisms → Bacteria	1467	Open in IMG/M
3300012210\|Ga0137378_10556525	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1056	Open in IMG/M
3300012210\|Ga0137378_10583337	All Organisms → cellular organisms → Bacteria	1028	Open in IMG/M
3300012210\|Ga0137378_10791680	All Organisms → cellular organisms → Bacteria	860	Open in IMG/M
3300012210\|Ga0137378_10850819	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	825	Open in IMG/M
3300012210\|Ga0137378_11444323	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600	Open in IMG/M
3300012210\|Ga0137378_11506837	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	584	Open in IMG/M
3300012210\|Ga0137378_11612781	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300012211\|Ga0137377_10620925	All Organisms → cellular organisms → Bacteria	1017	Open in IMG/M
3300012349\|Ga0137387_10403994	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	990	Open in IMG/M
3300012350\|Ga0137372_10083376	All Organisms → cellular organisms → Bacteria	2716	Open in IMG/M
3300012350\|Ga0137372_10143250	All Organisms → cellular organisms → Bacteria	1958	Open in IMG/M
3300012350\|Ga0137372_10170857	All Organisms → cellular organisms → Bacteria	1760	Open in IMG/M
3300012351\|Ga0137386_10456497	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	920	Open in IMG/M
3300012351\|Ga0137386_11204456	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300012353\|Ga0137367_10077557	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2459	Open in IMG/M
3300012353\|Ga0137367_10624574	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	753	Open in IMG/M
3300012354\|Ga0137366_10215219	All Organisms → cellular organisms → Bacteria	1431	Open in IMG/M
3300012356\|Ga0137371_10282928	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1293	Open in IMG/M
3300012357\|Ga0137384_10748862	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	792	Open in IMG/M
3300012357\|Ga0137384_10840822	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	741	Open in IMG/M
3300012357\|Ga0137384_11327334	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300012358\|Ga0137368_10806042	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	581	Open in IMG/M
3300012359\|Ga0137385_10187580	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1809	Open in IMG/M
3300012359\|Ga0137385_10314831	All Organisms → cellular organisms → Bacteria	1344	Open in IMG/M
3300012361\|Ga0137360_10841644	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	790	Open in IMG/M
3300012362\|Ga0137361_10209895	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1764	Open in IMG/M
3300012363\|Ga0137390_10029394	All Organisms → cellular organisms → Bacteria	5215	Open in IMG/M
3300012363\|Ga0137390_10682479	All Organisms → cellular organisms → Bacteria	990	Open in IMG/M
3300012363\|Ga0137390_11827115	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300012532\|Ga0137373_11276454	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300012683\|Ga0137398_10125020	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1647	Open in IMG/M
3300012683\|Ga0137398_10218732	All Organisms → cellular organisms → Bacteria	1261	Open in IMG/M
3300012683\|Ga0137398_11252120	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300012917\|Ga0137395_10063685	All Organisms → cellular organisms → Bacteria	2360	Open in IMG/M
3300012917\|Ga0137395_10080109	All Organisms → cellular organisms → Bacteria	2128	Open in IMG/M
3300012917\|Ga0137395_10650441	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	762	Open in IMG/M
3300012923\|Ga0137359_10125826	All Organisms → cellular organisms → Bacteria	2276	Open in IMG/M
3300012930\|Ga0137407_12400571	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300018433\|Ga0066667_10647743	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	883	Open in IMG/M
3300018468\|Ga0066662_11603695	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	679	Open in IMG/M
3300018482\|Ga0066669_10542174	All Organisms → cellular organisms → Bacteria	1012	Open in IMG/M
3300018482\|Ga0066669_10721239	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	879	Open in IMG/M
3300019890\|Ga0193728_1048695	All Organisms → cellular organisms → Bacteria	2064	Open in IMG/M
3300020006\|Ga0193735_1027753	Not Available	1737	Open in IMG/M
3300020010\|Ga0193749_1065961	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	681	Open in IMG/M
3300021560\|Ga0126371_13523342	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300025922\|Ga0207646_10223353	All Organisms → cellular organisms → Bacteria	1702	Open in IMG/M
3300026514\|Ga0257168_1109623	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	615	Open in IMG/M
3300026528\|Ga0209378_1163033	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	853	Open in IMG/M
3300026528\|Ga0209378_1284862	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	527	Open in IMG/M
3300026530\|Ga0209807_1243957	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	608	Open in IMG/M
3300026538\|Ga0209056_10002714	All Organisms → cellular organisms → Bacteria	18930	Open in IMG/M
3300026538\|Ga0209056_10015712	All Organisms → cellular organisms → Bacteria	7520	Open in IMG/M
3300026548\|Ga0209161_10331709	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	696	Open in IMG/M
3300027846\|Ga0209180_10010316	All Organisms → cellular organisms → Bacteria	4812	Open in IMG/M
3300027846\|Ga0209180_10736081	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300027862\|Ga0209701_10043016	All Organisms → cellular organisms → Bacteria	2914	Open in IMG/M
3300027875\|Ga0209283_10663669	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300027875\|Ga0209283_10914061	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300027882\|Ga0209590_10227923	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1184	Open in IMG/M
3300027882\|Ga0209590_10305414	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1022	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.23%
Host-Associated	Host-Associated	0.77%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.23%
Plants	Host-Associated → Plants	0.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.23%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	93.08%
Loam	Environmental → Terrestrial → Soil → Loam	6.15%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	70.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	21.54%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.62%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.54%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.77%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.77%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	66.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	17.69%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.31%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.54%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.77%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.77%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.77%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300020010	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s2	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062595_1000610261	3300004479	Soil	MKNTNGSENWRVLCQLASKEQDPEKLIDLVMQINQALEECHQKSRYDVEANAYAYNVAPQLSQLAEYDC*
Ga0066677_104842511	3300005171	Soil	MKDTNGSEDWRVLCELASKEKDPEKLIDLIVQINQALEESHQKSRYHVNATRYSCSVTPQLSQAAEYDC*
Ga0066683_109080181	3300005172	Soil	MKNTNTSDDWRVLCELASKEKDPEKLIDLIMQINQALEESHQKSRYHVNANGYSYSVAPQLSRPAECDC*
Ga0066680_103045601	3300005174	Soil	MRDTNESKDWRVLCELASKEKDPEKLIDLVVKINQALEECHQKPRYHVDPNAYSYSVSAQLSQAAEYDC*
Ga0066673_103375602	3300005175	Soil	MKNTSGSDDWRVLCELASKEKDPEKLIDLIVQINQALEQSHQKSRYQAEKNAYSYCVAPQLTEPAEYDC*
Ga0066690_100823033	3300005177	Soil	MKDVNKSDDWRVLCELASKEKDPEKLIDLILKINQALEESHQKSRYHGNTNTYSYSVAPQLSQPAEHDC*
Ga0066685_105441441	3300005180	Soil	MKDTNGSEDWRVLCELASKEKDPEKLIDLIVQINQALEESHQKSRYHVNANGYSCSVTPQLSQAAEYDC*
Ga0066676_103599092	3300005186	Soil	MKNTNRSDDWRVLCELASKEKDPEKLIDLVVKINQALEESHQKSRYHVNTNGYSYCVAPQLSQPAEYDC*
Ga0066676_105974802	3300005186	Soil	MKDTNRSDDWRVLCVLASKEKEPEKLIDLIVKINQALEESHQKSRYHVNANAYSYSVILSCRSLLSTIVSLAI*
Ga0070709_102323203	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	AFRSVPGGTMKNTNGSENWRVLCQLASKEQDPEKLIDLVMQINQALEECHQKSRYDVEANAYAYNVAPQLSQLAEYDC*
Ga0070714_1021983351	3300005435	Agricultural Soil	MKDTKRTDDWRVLCELASKEADPEKLVDLIVEINQALVESHQKSRCHARMYSCGGPLQFSQPEYDC*
Ga0070713_1000429612	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MKNTNGSENWRVLCQLASKEQDPEKLIDLVMQINQALEECHQKSRYDGEANAYAYSVAPQLSQLAEYDC*
Ga0070708_1000131241	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	SSMSRYQTCFVGECAWFRSIPGGTMRNTNESEDWRVLCELASKEKDPEKLINLVVKINQALEECHQESLSHVYADAYSYSVAPRLSQPAEYDC*
Ga0066682_107009582	3300005450	Soil	MKDTNGSEDWRVLCELASKEKDPEKLIDLIVQINQALEESHQKSRYHVNANGYSYSVAPQLSRPAECDC*
Ga0066707_107265852	3300005556	Soil	MKNTNRSHDWRILCELASKEKDPEKLIDLIMQINQALEESHQKSRYHVNANRYSYSVAPQLSQPAEYDC*
Ga0066705_100625322	3300005569	Soil	MKNVNGSDDWRVLCELASKERDPEKLIDLVVKINQALEDCDQKSRHHTDVNAYSCSVAPQFSQPVEYDC*
Ga0066708_102392702	3300005576	Soil	MKDVNKSDDWRILCELASKEKDPEKLIDLILKINQALEESHQKSRYHGNTNTYSYSVAPQLSQPAEHDC*
Ga0066691_109512381	3300005586	Soil	MKNTNTSDDWRVLCELASKEKDPEKLIDLIVQINQALEESHQKSRYHVNANGYSYSVAPQLSQRAEYD
Ga0066706_101976821	3300005598	Soil	MKDTNGSEDWRVLCELASKEKDPEKLIDLIVQINQALEESHQKSRYHVNANRYSCSVTPQLSQAAEYDC*
Ga0066706_102135562	3300005598	Soil	MKDVNKSDDWRVLCELASKEKDPEKLIDLILKINQALEESHQKSRYHGNTNTYSYSV
Ga0066706_102483001	3300005598	Soil	MKDVNKSDDWRILCELASKEKDPEKLIDLILKINQALEESHQKSRYHGNTNTYSYSV
Ga0066706_114422361	3300005598	Soil	MKNTSTSDDWRVLCELASKEKDPDKLIDLIMQINQALEESHQKSRYHGNANGYSYSVAPQLSQPAEYDC*
Ga0070717_104948652	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MRDTNGSEDWRVLCELASKEKDPERLIDLIMQINQALEKSHQKSRYHVNAYSYSVAPQLSQAIEYDC*
Ga0066653_102870191	3300006791	Soil	GTMKDTNGSEDWRVQCELASKEKDPEKLIDLIVKINQALEECQQKPRSHVYTNAYSYSVAPQLSQAAEYDC*
Ga0066653_104128512	3300006791	Soil	KDANSSNDWRVLCELASKEKDPEKLIDLIMKINQALEECQQKTRYHVNANTYTYSVAPQLSQPAKYDC*
Ga0066710_1045247331	3300009012	Grasslands Soil	MKDVNKSDDWRILCELASKEKDPEKLIDLIMQINQALEESHQKSRYHVNANRYSYSVAPSSRSLLSAIVSLAI
Ga0099829_100113758	3300009038	Vadose Zone Soil	MRNTNESEDWRVLCELASKEKDPEKLIDLVVKINQALEECHRKPRYHVDANTYSYSVAPQLSQAVEYDC*
Ga0099830_106106792	3300009088	Vadose Zone Soil	MKDSNRSDDWRVLCELASKEKDPEKLIDLIVQINQVLEESHQKSRHHVNANGYSYSVAPQLSEPAEYDC*
Ga0099828_102737062	3300009089	Vadose Zone Soil	MKDSNRSDDWRVLCELASKEKDPEKLIDLIVQINQVLEESHQKSRHHVNANGCSYSVAPQLSEPAEYDC*
Ga0099828_103910601	3300009089	Vadose Zone Soil	MRDTNESEDWRVLCELASKEKDPEKLIDLVVKINQALEECHRKPRYHVDANTYSYSVAPQLSQAVEYDC*
Ga0099827_102196252	3300009090	Vadose Zone Soil	MKDMNGSDDWRVLCELASKEKDPEKLIDLIVKINQALEECHQKSRYHRYADAYSCSVAPQFSQPAEYDC*
Ga0099827_103131643	3300009090	Vadose Zone Soil	MRNTNESEDWRVLCELASKEKDPEKLIDLVVKINQALEECHQKPRSHVDANAYSYSVAPQLSQAAEYDC*
Ga0134109_104560921	3300010320	Grasslands Soil	MKNTNTSDDWRVLCELASKEKDPEKLIDLIMQINQALEESHQKSRYHVNANRYSYSVAPQLSQPAEYDC*
Ga0137391_104509832	3300011270	Vadose Zone Soil	MRDTNGSENWRVLCELASKEKDPEKLIDLVVKINQALEECHQKPRYDVDANAYSYGVSPQLSQPAEYDC*
Ga0137391_109066402	3300011270	Vadose Zone Soil	MKDTNGSEDWRVLCELASKEKDPEKLIDLIVKINQTLEECHQKPRHHVDANAYSYGVSPQLSQ
Ga0137393_110446232	3300011271	Vadose Zone Soil	MKDSNRSNDWRVLCELASKEKDPEKLIDLIMQINQALEESHQKSRYHVNGYSYSVAPQLSQPAEYDC*
Ga0137389_108300801	3300012096	Vadose Zone Soil	MRNTNESEDWRVLCELASKEKDPEKLIDLVVKINQALEECHQKPRYHVDANAYSYSVAPQLSQAVEYDC*
Ga0137364_104783581	3300012198	Vadose Zone Soil	MKDTNGSEDWRVLCEVASKEQDPEKLIDLIVQINQMLEQSHQKSRHHVNTNGYSYSVAPQLSEPAEYDC*
Ga0137364_110778262	3300012198	Vadose Zone Soil	MRGSQFIPGGTMKNTNESDDWRVLCELASKEKDPEKLIDLIVKINQALEECQQKSRYHVHANTYSYSVNPQLSQPAEYDC*
Ga0137364_111116681	3300012198	Vadose Zone Soil	MKNTNRSDDWRVLCELASKEKDPEKLIDLIMQINQALEESHQKSRHHVNANRYSYSV
Ga0137383_103172242	3300012199	Vadose Zone Soil	MKDSNRSDDWRVLCELASKEKDPEKLIDLIVQINQALEESHQKSRHHVNANGYSYSVAPQ
Ga0137383_103298342	3300012199	Vadose Zone Soil	MKDANKSDDWRILCELASKEKDPEKLIDLIVQINQVLEESYQKSRYHVNANGYSYSVAPQHSQPAEYDC*
Ga0137383_103844552	3300012199	Vadose Zone Soil	MRNTNESEDWRVLCELASKEKDPEKLIDLVVKINQALEECHRKPRYHVDANAYSYSVAPQLSQAVEYDC*
Ga0137383_104003831	3300012199	Vadose Zone Soil	DDWRVLCELASKEKDPEKLIDLIMQINQALEESHQKSRYHVNANRYSYSVAPQLSQPAEYDC*
Ga0137383_109247261	3300012199	Vadose Zone Soil	MKDTNGSEDWRVLCELASKEKDPEKLIDLIMQINQALEESHQKSRYHVNANGYSCSVTPQLSQAAEYDC*
Ga0137383_111210681	3300012199	Vadose Zone Soil	TCFVGECAWFPSIPGGTMRDTNGSEDWRVLCELASKEKDPEKLIDLIVKINQALEECHQKSRYHEEANAYSYSVAPQLSQPAEYDC*
Ga0137365_102774492	3300012201	Vadose Zone Soil	MKDTNGSEDWRVLCELASKEKDPEKLIDLVVKINQALEECQQKPRSHVYANAYSYSVAPQLSQPAEYDC*
Ga0137365_102791813	3300012201	Vadose Zone Soil	MKNTNTSDDWRVLCELASKEKDPEKLIDLIMQINQALEESHQKSRYHGNANGYSYSVAPQLSQPAEDAC*
Ga0137365_103992981	3300012201	Vadose Zone Soil	MKDSNRSDDWRVLCELASKEKDPEKLIDLIVQINRALEESHQKSRHHVNTNGYSYSVAPQLSEPAEYDC*
Ga0137374_100356006	3300012204	Vadose Zone Soil	MKNTNGSEDWRVLCELASKEKDPEKLIDLIVKINQALEECHQKSRYHVNANAYSCSVAPQLLRPAEYDC*
Ga0137362_103854852	3300012205	Vadose Zone Soil	MRDTNGSENWRVLCELASKEKDPEKLIDLVVKINQALEECHQKPRYHVDANAYSYSVAPQLSQAAEYDC*
Ga0137362_106902582	3300012205	Vadose Zone Soil	MKNTNTSDDWRVLCELASKEKDPEKLIGLIVQINQALEESHQKSRYHVNANGYSYSVAPQLSQRAEYDC*
Ga0137380_104098572	3300012206	Vadose Zone Soil	MKDTNGSEDWRILCELASKEKDPEKLIDLIIQINQALEESHQKSRYHVNANGYSYSVAPQLSPPAEYDC*
Ga0137380_110988152	3300012206	Vadose Zone Soil	MKNTNTSDDWRVLCELASKEKDPEKLIDLIMQINQVLEKSHQKSRYHVNTNGYSYSVAPQLSQPAEYDC*
Ga0137380_112935001	3300012206	Vadose Zone Soil	MKDTNGSEDWRVLCELASKEKDPEKLIDLIVKINQALEECQQKPRSHVYTNAYSYSVAPQLSQAAEYDC*
Ga0137381_103192362	3300012207	Vadose Zone Soil	MKDTNGSEDWRILCELASKEKDPEKLIDLIIQINQALEESHQKSRYHVNANGYSYSVAPQLSQPVEYDC*
Ga0137381_104396562	3300012207	Vadose Zone Soil	MKNTNTSDDWRVLCELASKEKDPEKLIDLIMQINQALEESHQKSRYHGNANGYSYSVAPQLSQPAEYDC*
Ga0137381_115631561	3300012207	Vadose Zone Soil	GSEDWRVLCELASKEKDPEKLIDLVVKINQALEECQQKPRSHVYANAYSYSVAPQLSQPAEYDC*
Ga0137379_101256212	3300012209	Vadose Zone Soil	MGKCAWFPFIPGGTMKDTNGSEDWRVLCELASKEKDPEKLIDLVVKINQALEDCQQKSHYHVYANVYSYSVAPQLSQPAEYDC*
Ga0137379_101516922	3300012209	Vadose Zone Soil	MKNTNTSDDWRVLCELASKEKDPEKLIDLIVQINQALEESHQKSRYHVNANGYSYSVAPQLSQPAEYDC*
Ga0137379_107762621	3300012209	Vadose Zone Soil	MKNINGSDDWRVLCELASKEQDPEKLIDLIVQINQALEHSHQQSRDHVNANAYSYSVAAQLSQPAEYDC*
Ga0137379_108451322	3300012209	Vadose Zone Soil	MKDSNRSDDWRVLCELASKEKDPEKLIDLIVQINQALEESHQKSRHHVNTNAYSYCVAPQLSQPAEYDC*
Ga0137379_111908861	3300012209	Vadose Zone Soil	MKDTNGSEDWRVLCELASKEKDPEKLIDLVVKINQALLEECHQKPRYHVDANAYSYSVAPQLSQAAEYDC*
Ga0137379_113663541	3300012209	Vadose Zone Soil	MKDTNRSDDWRVLCELASREKDPEKLIDLILQINQALEESHQKSRYHVNTNGYSYSVAPQLSQPAEYDC*
Ga0137378_101665113	3300012210	Vadose Zone Soil	MKDTNGSEDWRVLCELASKEKDPEKLIDLVVKINQTLEECHQKPRYHVDANAYSYSVPPQLSQAAEYDC*
Ga0137378_103104083	3300012210	Vadose Zone Soil	MKNTNTSDDWRVLCELASKEKDPEKLIDLIVKINQALEESHQKSRYHLNTNAYSYCVAPQLSRPAEYDC*
Ga0137378_105565252	3300012210	Vadose Zone Soil	MKDTNGSEDWRVLCELASKEKDPEKLIDLVVKINQALEDCHQKPRYRVDANAYSYSVAPQLSQAAEYDC*
Ga0137378_105833372	3300012210	Vadose Zone Soil	MRNTNESEDWRVLCELASKEKDPEKLIDLVVKINQALEECQQKPRYHVNANGYSYSVAPQLSQPVEYDC*
Ga0137378_107916801	3300012210	Vadose Zone Soil	MKDSNRSDDWRVLCELASKEKDPEKLIDLIVQINQALEESHQKSRHHVNANGYSYSVAPQLSEPAEYDC*
Ga0137378_108508193	3300012210	Vadose Zone Soil	LCELASKEKDPEKLIDLIMQINQALEECQQKSRYHVNANGYSCSVTPQLSQAAEYDC*
Ga0137378_114443232	3300012210	Vadose Zone Soil	MKDSNRSDDWRVLCELASKEKDPEKLIDLIVKINQALEECQQKPRSHVYANAYSSLEECQQKPRSHVYANAYSYSVAPQLSQAAEYDC*
Ga0137378_115068371	3300012210	Vadose Zone Soil	MRDTNGSEDWRVLCELASKEKDPEKLIDLIVKINQALEECHQKSRYHEEANAYSYSVAPQLSPPAEYDC*
Ga0137378_116127811	3300012210	Vadose Zone Soil	MKDANKSDDWRILCELASKEKDPEKLIDLIVQINQVLEESYQKSRYHVNANGYSYSVAPQLSQPAEYDC*
Ga0137377_106209252	3300012211	Vadose Zone Soil	MRDTNGSEDWRVLCELASKEKDPEKLIDLIVKINQALEECHQKSRYHEEANAYSYSVAPQLSQPAEYDC*
Ga0150985_1106756321	3300012212	Avena Fatua Rhizosphere	MKDTNGSEDLRVLCELASKEEDPKKLLDLITKINQALQELHQKSRSPLRADSYSHLFAAQQCR*
Ga0137387_104039941	3300012349	Vadose Zone Soil	MEDTNRSDDWRVLCELASKEKDPEKLIDLIMQINQVLEESHQKSRYHVNTNGYSYSIAPQHSQPAEYDC*
Ga0137372_100833762	3300012350	Vadose Zone Soil	MKNTNRSDDWRVLCELASKEKDPEKLIDLIMQINQALEESHQKSRYHVNANRYSYSVAPQLSQPAEYDC*
Ga0137372_101432501	3300012350	Vadose Zone Soil	MKNTNRSDDWRVLCELASKEKDPEKLIDLIVQINQALEESHQKSRYHVNANGYSYSVAPQLSQPAEYDC*
Ga0137372_101708572	3300012350	Vadose Zone Soil	MKDTNGSEDWRVLCELASKEKDPEKLIDLIVKINQALEECQQRSRSYVYANAYSYNVAPKLSQAAEYDC*
Ga0137386_104564972	3300012351	Vadose Zone Soil	MKNTNTSDDWRVLCELASKEKDPEKLIDLIMQINQALEESHQKSRYHVNANGYSYSVAPQLSQPAEYDC*
Ga0137386_112044561	3300012351	Vadose Zone Soil	MKDTNGSEDWRVLCELASKEQDPEKLIDLIVKINQALEECQQKPRSHVYTNAYSYSVAPQLSQAAEYDC*
Ga0137367_100775572	3300012353	Vadose Zone Soil	MANTNRSADWRILCELASKEKDSEKLIDLIAKINKALELCQQKPRDQAEANASSNSIGAELSQPAESDR*
Ga0137367_106245742	3300012353	Vadose Zone Soil	MKDTNGSEDWRVLCELASKEKDPEKLIDLIVQINQALEECQQKPRHHVDTNAYSYNVAPQLSQAAEYDC*
Ga0137366_102152192	3300012354	Vadose Zone Soil	MKDTNQSDDWRVLCEVASKEKDPEKLIHLIVKINQALEECHQKSRYHVYANAYSHSVAPQLAQSAEYDC*
Ga0137366_104569781	3300012354	Vadose Zone Soil	KQSFKGSAKSGIRSTSRYQTCFTEECAWFPSIPGGTMKDTNGSEDWRVLCELASKERDPEKLIDLIVKINQVLEECQQKSRSHVYANAYLYGVAPRLSHPAEYNC*
Ga0137371_102829282	3300012356	Vadose Zone Soil	MWFPSIPGGTMKDTNGSEDWRVLCELASKEKDPEKLIDLIVQINQALEESHQKSRYHVNANGYSCSVTPQLSQAAEYDC*
Ga0137384_107488622	3300012357	Vadose Zone Soil	MKNTNTSDDWRVLCELASKEKDPEKLIDLIVKINQALEESHQKSRYHVNTNAYSYCVAPQLSQPAEYDC*
Ga0137384_108408221	3300012357	Vadose Zone Soil	SDDWRVLCELASKEKDPEKLIDLIVKINQALEESHQKSRYQVNTNGYSYCVAAQLSQPAEYDC*
Ga0137384_113273341	3300012357	Vadose Zone Soil	MKDTNGSEDWRVLCELASKEKDPEKLIDLIVKINQALEECQQKPRYHVDANAYSYNVAPQLSQAAEYDC*
Ga0137368_108060422	3300012358	Vadose Zone Soil	CELASKEKDPEKLIDLIVKINQALEECHQKSRYHVNANAYSCSVAPQLLRPAEYDC*
Ga0137385_101875802	3300012359	Vadose Zone Soil	MKNTNTSEDWRILCELASKEKDPEKLIDLILQINQALEESHQKSRYHVNANGYSYSVAPQLSPPAEYDC*
Ga0137385_103148312	3300012359	Vadose Zone Soil	MKNTNTSDDWRVLCELASKEKDPEKLIDLILQINQALEESHQKSRYQVNTNGYSYCVAAQLSQPAEYDC*
Ga0137375_106025472	3300012360	Vadose Zone Soil	FKGSRKSGIRSMSMYQTCFVGECAWFLSIPGGTMKDTNGSEDWRVLCELASKEKDPEKLIDLVVKINQALEECQQKPRSHVYANAYSYSVAPQLSQPAEYDC*
Ga0137360_108416441	3300012361	Vadose Zone Soil	DDWRVLCELASKEKDPEKLIDLIVQINQALEESHQKSRYHVNANGYSYSVAPQLSQPAEYDC*
Ga0137361_102098952	3300012362	Vadose Zone Soil	MKDANKSDDWRILCELASKEKDPEKLIDLIVQINQALEESHQKSRYHVNANGYSYSVAPQHSQPAEYDC*
Ga0137390_100293944	3300012363	Vadose Zone Soil	MKDTNGSEDWRVLCELASKEKDPEKLIDLIVKINQGLEECQQKPRSHLYANAYSYSVAPQLSQPAEYAC*
Ga0137390_106824792	3300012363	Vadose Zone Soil	MKDSNRSNDWRVLCELASKEKDPEKLIDLIVKINQALEESHQKSRYHVNGYSYSVAPQLSQPAEYDC*
Ga0137390_118271151	3300012363	Vadose Zone Soil	ESMRGSQFIPGGPMKNTNGSDDWRVLCELASKEQDPEKLVDLIVKINQALEQSHQKSRCQVEKNAYSYCVAPELSQPVEYDC*
Ga0137373_112764542	3300012532	Vadose Zone Soil	GSEDWRVLCELASKEKDPEKLIDLIVQINQALEECQQKPRHHVDTNAYSYNVAPQLSQAAEYDC*
Ga0137398_101250204	3300012683	Vadose Zone Soil	MKDTNGSEDWRVLCELASKEKDPEKLIDLIAKINQTLEECHQKPRHHVDANTYSYSVAPQLSQAVEYDC*
Ga0137398_102187321	3300012683	Vadose Zone Soil	MKNTNRSDEWRVLCELASKEKDPEKLIDLIMQLNQVLEESHQKSRYHVNANGYSYSVAPQLSQPAEYDC*
Ga0137398_112521201	3300012683	Vadose Zone Soil	MKGSNRSDGWRVLCELASKEKDPEKLIDLIVKINQALEECHQKSRYHRYADAYSYSVAP
Ga0137395_100636854	3300012917	Vadose Zone Soil	MKDTNGSEDWRVLCELASKEKDPEKLIDLIAKINQTLEECHQKPRHHVDANAYSYGVSPQLSQAAEYDC*
Ga0137395_100801091	3300012917	Vadose Zone Soil	MKNTNTSDDWRVPCELASKEKDPEKLIDLIVQINQALEESHQKSRYHVNANGYSYSVAPQLSQPAEYDC*
Ga0137395_106504412	3300012917	Vadose Zone Soil	MKGSNRSDGWRVLCELASKEKDPEKLIDLIVQINQALEESHQKSRYHGDANAYSYNAAPQPSQRAEYDC*
Ga0137359_101258262	3300012923	Vadose Zone Soil	MRDTNESEDWRVLCELASKEKDPEKLIDLVVKINQALEECHQKPRYHVDANAYSYSVAPQLSQAAEYDC*
Ga0137407_124005711	3300012930	Vadose Zone Soil	MKDANRSDNWRVLCELASKEKDPEKLIDLVMKINQALEECQQKTRYHVNTNTYSYSVAPQLSQPAGYDC*
Ga0066667_106477432	3300018433	Grasslands Soil	MKNTNTSDDWRVLCELASKEKDPEKLIDLIVQINQALEESHQKSRYHVNANGYSCSVTPQLSQAAEYDC
Ga0066662_116036951	3300018468	Grasslands Soil	MRDTNESKDWRVLCELASKEKDPEKLIDLVVKINQALEECHQKPRYPLDAIAYSYSV
Ga0066669_105421741	3300018482	Grasslands Soil	WRVLCELASKEKDPEKLIDFIVQINQALEESHQKSRYHVNANGYSCSVTPQLSQAAEYDC
Ga0066669_107212391	3300018482	Grasslands Soil	MKNTNTSDDWRVLCELASKEKDPEKLIDLILQINQALEESHQKSRYHENANGYSYSVAPQLSQPAEYDC
Ga0193728_10486954	3300019890	Soil	MKDANRSDDWRVLCELASKEKDPEKLIDLIMQINEALEESHQKSRYHVDVNGYSYSGAPQVSQRAEYDC
Ga0193735_10277532	3300020006	Soil	CELASEEKVPEKLIDLIVKINQALEQGHQKSRYQVEKNAYSYCVAPQLSQPAEYDC
Ga0193749_10659611	3300020010	Soil	MKDTNGSEDWRVLCELASKEKDPEKLIDLVVKINRVLEECQQKPRSHVYANAYSYRVAPQLSQPAAYDF
Ga0126371_135233421	3300021560	Tropical Forest Soil	MKDTRRSNDWRILCELASKEIDPEKLIDLIMKINQALEECQQKSPFRVSATAYSHSVAPQLSQRVEYDC
Ga0207646_102233533	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MKDTNGSEDWRVLCELASKEKDPEKLIDLVVKINQALEECHQKPRYHADANAYSYSVAPQLSQPAEYDC
Ga0257168_11096231	3300026514	Soil	MKDTNRSDDWRVLCELASKEKDSEKLIDLVVKINQALEECQQKPRSHVYANAYSYSVAPQLSQPAEYDC
Ga0209378_11630331	3300026528	Soil	MKNTNTSDDWRVLCELASKEKDPEKLIDLIMQINQALEESHQKSRYHVNANGYSYSVAPQLSQPAEYDC
Ga0209378_12848621	3300026528	Soil	AWFPSIPGGTMKDTNGSEDWRVLCELASKEKDPEKLIDLIVQINQALEESHQKSRYHVNANGYSCSVTPQLSQAAEYDC
Ga0209807_12439571	3300026530	Soil	MKNVNGSDDWRVLCELASKERDPEKLIDLVVKINQALEDCDQKSRHHTDVNAYSCSVAPQFSQPVEYDC
Ga0209056_100027145	3300026538	Soil	MKDVNKSDDWRILCELASKEKDPEKLIDLILKINQALEESHQKSRYHGNTNTYSYSVAPQLSQPAEHDC
Ga0209056_100157125	3300026538	Soil	MKDVNKSDDWRVLCELASKEKDPEKLIDLILKINQALEESHQKSRYHGNTNTYSYSVAPQLSQPAEHDC
Ga0209161_103317092	3300026548	Soil	MKDTNGSEDWRVLCELASKEKDPEKLIDLIVQINQALEESHQKSRYHVNANRYSCSVTPQLSQAAEYDC
Ga0209180_100103166	3300027846	Vadose Zone Soil	MRNTNESEDWRVLCELASKEKDPEKLIDLVVKINQALEECHRKPRYHVDANTYSYSVAPQLSQAVEYDC
Ga0209180_107360811	3300027846	Vadose Zone Soil	MRDTNGSENWRVLCELASKEKDPEKLIDLVVKINQALEECHQKPRYDVDANAYSYGVSPQLSQPAEYDC
Ga0209701_100430162	3300027862	Vadose Zone Soil	MKDSNRSDDWRVLCELASKEKDPEKLIDLIVQINQVLEESHQKSRHHVNANGYSYSVAPQLSEPAEYDC
Ga0209283_106636692	3300027875	Vadose Zone Soil	MKDSNRSDDWRVLCELASKEKDPEKLIDLIVQINQVLEESHQKSRHHVNANGCSYSVAP
Ga0209283_109140612	3300027875	Vadose Zone Soil	VLCELASKEKDPEKLIDLIVQINQVLEESHQKSRHHVNANGYSYSVAPQLSEPAEYDC
Ga0209590_102279232	3300027882	Vadose Zone Soil	MKDMNGSDDWRVLCELASKEKDPEKLIDLIVKINQALEECHQKSRYHRYADAYSCSVAPQFSQPAEYDC
Ga0209590_103054142	3300027882	Vadose Zone Soil	MKATNRSDDWRVLCELASKEEDPEKLIDLVVKINQALEECHQKPRSHVDANAYSYSVAPQLSQAAEYDC

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F062626

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences