Metagenome / Metatranscriptome Family F062617

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F062617
Family Type	Metagenome / Metatranscriptome
Number of Sequences	130
Average Sequence Length	43 residues
Representative Sequence	VTDLAACMVTVQVLPETISQPLQPVKMEPKAGVAVRVTTVP
Number of Associated Samples	88
Number of Associated Scaffolds	130

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	73.33 %
% of genes near scaffold ends (potentially truncated)	27.69 %
% of genes from short scaffolds (< 2000 bps)	76.92 %
Associated GOLD sequencing projects	71
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (77.692 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (36.154 % of family members)
Environment Ontology (ENVO)	Unclassified (61.538 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (63.846 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 20.29% Coil/Unstructured: 79.71%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.29
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.29
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 130 Family Scaffolds
PF01923	Cob_adeno_trans	3.08
PF02698	DUF218	3.08
PF00908	dTDP_sugar_isom	2.31
PF13440	Polysacc_synt_3	2.31
PF13540	RCC1_2	2.31
PF00999	Na_H_Exchanger	1.54
PF13517	FG-GAP_3	1.54
PF02954	HTH_8	1.54
PF07786	HGSNAT_cat	1.54
PF13472	Lipase_GDSL_2	1.54
PF08530	PepX_C	0.77
PF12708	Pectate_lyase_3	0.77
PF08240	ADH_N	0.77
PF08241	Methyltransf_11	0.77
PF06452	CBM9_1	0.77
PF01839	FG-GAP	0.77
PF03721	UDPG_MGDP_dh_N	0.77
PF01833	TIG	0.77
PF00005	ABC_tran	0.77
PF13565	HTH_32	0.77
PF13180	PDZ_2	0.77
PF00535	Glycos_transf_2	0.77
PF02492	cobW	0.77
PF01042	Ribonuc_L-PSP	0.77
PF00282	Pyridoxal_deC	0.77
PF08239	SH3_3	0.77
PF00106	adh_short	0.77
PF00072	Response_reg	0.77

COG ID	Name	Functional Category	% Frequency in 130 Family Scaffolds
COG2949	Uncharacterized periplasmic protein SanA, affects membrane permeability for vancomycin	Cell wall/membrane/envelope biogenesis [M]	3.08
COG1434	Lipid carrier protein ElyC involved in cell wall biogenesis, DUF218 family	Cell wall/membrane/envelope biogenesis [M]	3.08
COG1898	dTDP-4-dehydrorhamnose 3,5-epimerase or related enzyme	Cell wall/membrane/envelope biogenesis [M]	2.31
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	1.54
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	1.54
COG3503	Uncharacterized membrane protein, DUF1624 family	Function unknown [S]	1.54
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	1.54
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	1.54
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	1.54
COG1250	3-hydroxyacyl-CoA dehydrogenase	Lipid transport and metabolism [I]	0.77
COG1893	Ketopantoate reductase	Coenzyme transport and metabolism [H]	0.77
COG1004	UDP-glucose 6-dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.77
COG2936	Predicted acyl esterase	General function prediction only [R]	0.77
COG0677	UDP-N-acetyl-D-mannosaminuronate dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.77
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.77
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.77
COG0076	Glutamate or tyrosine decarboxylase or a related PLP-dependent protein	Amino acid transport and metabolism [E]	0.77

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	78.46 %
Unclassified	root	N/A	21.54 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	77.69 %
Unclassified	root	N/A	21.54 %
Viruses	superkingdom	All Organisms → Viruses	0.77 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	77.69 %
Unclassified	root	N/A	21.54 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.54 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	20.77 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	9.23 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3.85 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	3.08 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.31 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.77 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.54 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	16.15 %
unclassified Nitrospirae	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae	9.23 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3.85 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	3.08 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.54 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.54 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.77 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.77 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.54 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	16.15 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	8.46 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	3.85 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	3.08 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.54 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	1.54 %
Nitrospirae bacterium 13_2_20CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	0.77 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.77 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.77 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.54 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	14.62 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	8.46 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3.85 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	2.31 %
Sterolibacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sterolibacteriaceae	1.54 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.54 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.77 %
Nitrospirae bacterium 13_2_20CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	0.77 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.77 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.54 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	14.62 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	8.46 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3.85 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2.31 %
Methyloversatilis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sterolibacteriaceae → Methyloversatilis	1.54 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.54 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.77 %
Nitrospirae bacterium 13_2_20CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	0.77 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.77 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.54 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	14.62 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	8.46 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3.85 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2.31 %
unclassified Methyloversatilis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sterolibacteriaceae → Methyloversatilis → unclassified Methyloversatilis	1.54 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.54 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.77 %
Nitrospirae bacterium 13_2_20CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	0.77 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.77 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.54 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	14.62 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	8.46 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3.85 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2.31 %
Methyloversatilis sp. 12-65-5	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sterolibacteriaceae → Methyloversatilis → unclassified Methyloversatilis → Methyloversatilis sp. 12-65-5	1.54 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.54 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.77 %
Nitrospirae bacterium 13_2_20CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	0.77 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.77 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.77 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001661\|JGI12053J15887_10425262	Not Available	637	Open in IMG/M
3300002558\|JGI25385J37094_10043699	All Organisms → cellular organisms → Bacteria	1530	Open in IMG/M
3300002908\|JGI25382J43887_10114859	All Organisms → cellular organisms → Bacteria	1409	Open in IMG/M
3300002908\|JGI25382J43887_10207215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	938	Open in IMG/M
3300005167\|Ga0066672_10081382	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1938	Open in IMG/M
3300005176\|Ga0066679_10079595	All Organisms → cellular organisms → Bacteria	1955	Open in IMG/M
3300005177\|Ga0066690_10306304	Not Available	1073	Open in IMG/M
3300005178\|Ga0066688_10137644	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1521	Open in IMG/M
3300005180\|Ga0066685_10144816	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1613	Open in IMG/M
3300005180\|Ga0066685_10620489	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	744	Open in IMG/M
3300005187\|Ga0066675_10176441	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1485	Open in IMG/M
3300005447\|Ga0066689_10346948	All Organisms → cellular organisms → Bacteria	925	Open in IMG/M
3300005450\|Ga0066682_10092112	All Organisms → cellular organisms → Bacteria	1894	Open in IMG/M
3300005552\|Ga0066701_10165444	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1340	Open in IMG/M
3300005552\|Ga0066701_10818410	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	554	Open in IMG/M
3300005554\|Ga0066661_10022022	All Organisms → cellular organisms → Bacteria	3406	Open in IMG/M
3300005554\|Ga0066661_10780485	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	559	Open in IMG/M
3300005555\|Ga0066692_10464422	Not Available	807	Open in IMG/M
3300005555\|Ga0066692_10564980	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300005555\|Ga0066692_10611001	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300005556\|Ga0066707_10648365	Not Available	668	Open in IMG/M
3300005558\|Ga0066698_10853007	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300005559\|Ga0066700_10514656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	835	Open in IMG/M
3300005568\|Ga0066703_10840849	Not Available	524	Open in IMG/M
3300005586\|Ga0066691_10473178	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	749	Open in IMG/M
3300005598\|Ga0066706_10878413	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	700	Open in IMG/M
3300006031\|Ga0066651_10368554	Not Available	769	Open in IMG/M
3300006034\|Ga0066656_10547752	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300006794\|Ga0066658_10104700	All Organisms → cellular organisms → Bacteria	1348	Open in IMG/M
3300006797\|Ga0066659_10978172	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	707	Open in IMG/M
3300006797\|Ga0066659_11379739	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	588	Open in IMG/M
3300006800\|Ga0066660_10015260	All Organisms → cellular organisms → Bacteria	4316	Open in IMG/M
3300007255\|Ga0099791_10027681	All Organisms → cellular organisms → Bacteria → Proteobacteria	2470	Open in IMG/M
3300007255\|Ga0099791_10078001	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1508	Open in IMG/M
3300007258\|Ga0099793_10120608	All Organisms → cellular organisms → Bacteria	1226	Open in IMG/M
3300007258\|Ga0099793_10208789	Not Available	937	Open in IMG/M
3300007265\|Ga0099794_10043713	All Organisms → cellular organisms → Bacteria	2139	Open in IMG/M
3300007788\|Ga0099795_10465134	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300009012\|Ga0066710_101087738	All Organisms → cellular organisms → Bacteria	1236	Open in IMG/M
3300009012\|Ga0066710_101419605	All Organisms → cellular organisms → Bacteria	1075	Open in IMG/M
3300009012\|Ga0066710_102698030	Not Available	709	Open in IMG/M
3300009012\|Ga0066710_103358724	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300009088\|Ga0099830_10436312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1063	Open in IMG/M
3300009089\|Ga0099828_10106938	All Organisms → cellular organisms → Bacteria	2428	Open in IMG/M
3300009090\|Ga0099827_11584481	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	570	Open in IMG/M
3300009090\|Ga0099827_11656210	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300009137\|Ga0066709_100113531	All Organisms → cellular organisms → Bacteria	3362	Open in IMG/M
3300009137\|Ga0066709_100321922	All Organisms → cellular organisms → Bacteria	2111	Open in IMG/M
3300009137\|Ga0066709_101852759	Not Available	843	Open in IMG/M
3300009137\|Ga0066709_104309529	Not Available	519	Open in IMG/M
3300009137\|Ga0066709_104545115	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	507	Open in IMG/M
3300009143\|Ga0099792_10188052	All Organisms → cellular organisms → Bacteria	1166	Open in IMG/M
3300009162\|Ga0075423_11346925	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	763	Open in IMG/M
3300010046\|Ga0126384_11663774	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	603	Open in IMG/M
3300010326\|Ga0134065_10012914	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2254	Open in IMG/M
3300010333\|Ga0134080_10248378	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	784	Open in IMG/M
3300010359\|Ga0126376_10356886	All Organisms → cellular organisms → Bacteria	1298	Open in IMG/M
3300012198\|Ga0137364_10604428	Not Available	826	Open in IMG/M
3300012202\|Ga0137363_10808301	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	795	Open in IMG/M
3300012202\|Ga0137363_11518797	All Organisms → cellular organisms → Bacteria → Acidobacteria	561	Open in IMG/M
3300012203\|Ga0137399_10028239	All Organisms → cellular organisms → Bacteria	3818	Open in IMG/M
3300012203\|Ga0137399_10530180	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	988	Open in IMG/M
3300012203\|Ga0137399_11061160	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300012354\|Ga0137366_10548226	All Organisms → cellular organisms → Bacteria	832	Open in IMG/M
3300012385\|Ga0134023_1010330	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300012685\|Ga0137397_10065934	All Organisms → cellular organisms → Bacteria	2617	Open in IMG/M
3300012685\|Ga0137397_10524303	Not Available	882	Open in IMG/M
3300012917\|Ga0137395_10323234	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1096	Open in IMG/M
3300012918\|Ga0137396_10022958	All Organisms → cellular organisms → Bacteria	4033	Open in IMG/M
3300012918\|Ga0137396_10106024	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2012	Open in IMG/M
3300012918\|Ga0137396_10347006	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1098	Open in IMG/M
3300012918\|Ga0137396_10376313	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1052	Open in IMG/M
3300012918\|Ga0137396_10563258	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	844	Open in IMG/M
3300012922\|Ga0137394_10173248	All Organisms → cellular organisms → Bacteria	1839	Open in IMG/M
3300012927\|Ga0137416_11957107	Not Available	537	Open in IMG/M
3300012929\|Ga0137404_10366837	All Organisms → cellular organisms → Bacteria	1264	Open in IMG/M
3300012944\|Ga0137410_10013966	All Organisms → cellular organisms → Bacteria	5459	Open in IMG/M
3300012944\|Ga0137410_10193746	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sterolibacteriaceae → Methyloversatilis → unclassified Methyloversatilis → Methyloversatilis sp. 12-65-5	1571	Open in IMG/M
3300015053\|Ga0137405_1164953	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1259	Open in IMG/M
3300015264\|Ga0137403_10320600	All Organisms → cellular organisms → Bacteria	1441	Open in IMG/M
3300015359\|Ga0134085_10060929	All Organisms → cellular organisms → Bacteria	1522	Open in IMG/M
3300015359\|Ga0134085_10225262	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	812	Open in IMG/M
3300017656\|Ga0134112_10233671	Not Available	726	Open in IMG/M
3300017659\|Ga0134083_10154888	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	929	Open in IMG/M
3300017659\|Ga0134083_10180938	Not Available	864	Open in IMG/M
3300018468\|Ga0066662_10991708	All Organisms → cellular organisms → Bacteria	831	Open in IMG/M
3300018468\|Ga0066662_12821956	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	515	Open in IMG/M
3300020170\|Ga0179594_10101969	All Organisms → cellular organisms → Bacteria	1033	Open in IMG/M
3300021078\|Ga0210381_10395186	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	510	Open in IMG/M
3300021151\|Ga0179584_1138465	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1597	Open in IMG/M
3300024330\|Ga0137417_1257538	All Organisms → cellular organisms → Bacteria	1974	Open in IMG/M
3300026296\|Ga0209235_1084186	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1411	Open in IMG/M
3300026296\|Ga0209235_1129585	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1044	Open in IMG/M
3300026297\|Ga0209237_1053637	All Organisms → cellular organisms → Bacteria	2007	Open in IMG/M
3300026297\|Ga0209237_1240767	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	556	Open in IMG/M
3300026298\|Ga0209236_1191007	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300026317\|Ga0209154_1106963	All Organisms → cellular organisms → Bacteria	1189	Open in IMG/M
3300026318\|Ga0209471_1202937	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	752	Open in IMG/M
3300026322\|Ga0209687_1203816	Not Available	610	Open in IMG/M
3300026324\|Ga0209470_1353640	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	527	Open in IMG/M
3300026331\|Ga0209267_1232709	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	667	Open in IMG/M
3300026334\|Ga0209377_1112356	All Organisms → Viruses → Predicted Viral	1110	Open in IMG/M
3300026334\|Ga0209377_1223861	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300026335\|Ga0209804_1057252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sterolibacteriaceae → Methyloversatilis → unclassified Methyloversatilis → Methyloversatilis sp. 12-65-5	1883	Open in IMG/M
3300026524\|Ga0209690_1020472	All Organisms → cellular organisms → Bacteria → Proteobacteria	3349	Open in IMG/M
3300026524\|Ga0209690_1193574	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	655	Open in IMG/M
3300026536\|Ga0209058_1136602	Not Available	1183	Open in IMG/M
3300026536\|Ga0209058_1263301	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	599	Open in IMG/M
3300026548\|Ga0209161_10075457	All Organisms → cellular organisms → Bacteria	2102	Open in IMG/M
3300026548\|Ga0209161_10266129	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	873	Open in IMG/M
3300026548\|Ga0209161_10334002	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300026552\|Ga0209577_10039558	All Organisms → cellular organisms → Bacteria	4049	Open in IMG/M
3300026552\|Ga0209577_10380051	Not Available	1027	Open in IMG/M
3300026557\|Ga0179587_10163171	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1395	Open in IMG/M
3300027643\|Ga0209076_1161466	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	624	Open in IMG/M
3300027875\|Ga0209283_10074551	All Organisms → cellular organisms → Bacteria	2190	Open in IMG/M
3300027903\|Ga0209488_10007643	All Organisms → cellular organisms → Bacteria	8088	Open in IMG/M
3300027903\|Ga0209488_10147083	All Organisms → cellular organisms → Bacteria	1778	Open in IMG/M
3300028536\|Ga0137415_10036087	All Organisms → cellular organisms → Bacteria → Proteobacteria	4852	Open in IMG/M
3300028536\|Ga0137415_10267124	All Organisms → cellular organisms → Bacteria	1517	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.23%
Host-Associated	Host-Associated	0.77%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.46%
Aquatic	Environmental → Aquatic	0.77%
Plants	Host-Associated → Plants	0.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.46%
Freshwater	Environmental → Aquatic → Freshwater	0.77%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	97.69%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.77%
Loam	Environmental → Terrestrial → Soil → Loam	0.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.77%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	52.31%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	44.62%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.77%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	36.15%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	33.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	16.15%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	9.23%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.54%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.77%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.77%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.77%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012385	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021151	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_06_16RNAfungal (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12053J15887_104252621	3300001661	Forest Soil	VTDFAAFMVTVQVVPETESQPLQPVSMEPAPGAAVKVTTVPRS*
JGI25385J37094_100436993	3300002558	Grasslands Soil	VTDLAALMVTVQVVPETVSQPFQPVKMERRSGVTVRVTTVP*
JGI25382J43887_101148591	3300002908	Grasslands Soil	VTALAALMVTVQVAPEAVSHPLQPVKMEKKSGVAVRVTTVPLV
JGI25382J43887_102072152	3300002908	Grasslands Soil	VAVTDLAALMVTVQVVPETVSQPLQLVKIEPKDGVAVRVTTVPLL*
Ga0066672_100813821	3300005167	Soil	MPRNLAVTDLAALMVTVQVLCETISQPRQWVKIEPKAGVAVRVTTVP
Ga0066679_100795952	3300005176	Soil	VTALAALMVTVQVVPESVSQPSQPVKMERKLGVAVRVTVVPLL*
Ga0066690_103063042	3300005177	Soil	LAVTDLAAVMVTVQVLPETASHPLQPLKMEGRVAATVRVTVVPLS*
Ga0066688_101376443	3300005178	Soil	VTDLAELMVTLQVVPETVSQSSQPVKMERKPVGVAVRTTVLPLV*
Ga0066685_101448163	3300005180	Soil	VTVLAAFMVTVQVLPEAVSQPLQPMNMDKGPGVAVRVTIVPLL*
Ga0066685_106204893	3300005180	Soil	DLAAFIVTAQVLPETESHPLQLVKLEPVAGVAVRVTTVPLA*
Ga0066675_101764413	3300005187	Soil	VTDLAELMVTLQVVPETVSQPSQPVKMERKPVGVAVRTTVLPLA*
Ga0066689_103469482	3300005447	Soil	VTDLAELMVTLQVVPETVSQPSQPVKMERKPVGVAVRTTVLPLV*
Ga0066682_100921123	3300005450	Soil	VTDLARLMVTVQVVPETASQPSQPVKMESKPVGVAVRTTVLPLA*
Ga0066701_101654443	3300005552	Soil	VTDLAELMVTLHVVPGAASQPSQPVKMERKPVGVAVRTTVLPLA*
Ga0066701_108184102	3300005552	Soil	VTDLALLMVTVQVVSETASHPSQPVKTLRRAGVAVRVTTVPL
Ga0066661_100220224	3300005554	Soil	VTDRAELIVTVQVVPETVSQPLQPVNTLPKAGVAVRVTVVPLV*
Ga0066661_107804851	3300005554	Soil	MPRNLAVTDLAALMVTVQVLCETISQPRQWVKIEPKAGVAVRVTTVPL
Ga0066692_104644223	3300005555	Soil	VTVLVLFMITVQVVPETASQPVQPVKMERKPVGVAVRVTVVPLV*
Ga0066692_105649801	3300005555	Soil	LAVTDFAAPMVTVQVVSEAESQPLQPLKMERKSGVTVSVTTVP*
Ga0066692_106110012	3300005555	Soil	MVTVQVVPESASQPLQPMKTERKPGVAVRVTTVPLV*
Ga0066707_106483652	3300005556	Soil	MVTVQVAPEAVSHPLQPVKMEKKSGVAVRVTTVPLV*
Ga0066698_108530072	3300005558	Soil	VIDVADLMVTVQVVPETASHPLQLEKLDPVAGVAVSVTTVPYG*
Ga0066700_105146561	3300005559	Soil	VTDLAPLMLTIQVEPETASQSLQPVKMERKAGVALRVTTVPLV
Ga0066703_108408493	3300005568	Soil	TLQVVPETASQPLQPVKIDPLAGVAVRVTVVPLV*
Ga0066691_104731781	3300005586	Soil	MVTVQVVPETASHPLQLVKLDPVAGVAVRVTTVPYG*
Ga0066706_108784133	3300005598	Soil	VTDVADLMVTVQVVPETASHPLQLVKLDPVAGVAVRVTMAPLS*
Ga0066651_103685543	3300006031	Soil	VTDLAELMVTLQVVPETASQPLLQKAKVEPGAGVAVRTTVLPLV*
Ga0066656_105477521	3300006034	Soil	LTDFAEIMVTVQVAPDIVSHPLQPVKTESKWGVAVRVTTVPQ*
Ga0066656_110678852	3300006034	Soil	KLAVTDRAALMVTLQLVPETVSQPLQPVKVEPLAGVAVRVTVVPLV*
Ga0066658_101047002	3300006794	Soil	VTDLAELMVTLQVVPETASQPSQPVKMERKPVGVAVRTTVLPLA*
Ga0066659_109781722	3300006797	Soil	VTDLALLMVTVQIVSETASHPSQPVKTLRRAGVAVRVTT
Ga0066659_113797393	3300006797	Soil	LKLAVTARAVLMVTLQVVPETASQPLQKAKVEPGAGVAVRTTVLPLV*
Ga0066660_100152605	3300006800	Soil	MPRNLAVTDLAALMVTVQVLCETISQPRQWVKIEPKAGVAVRVTTVPLV*
Ga0099791_100276813	3300007255	Vadose Zone Soil	VTVVAVRMVKEQVVPEKESQPLQPLKVERRSGFAVRVTTVPYL*
Ga0099791_100780012	3300007255	Vadose Zone Soil	LAVTDLAEFMFTVQVVPETESQPFQPVKVERKAGVARRVTTVPPL*
Ga0099793_101206085	3300007258	Vadose Zone Soil	VVAVRMVTEQVVPETESQPLQPLKVERRSGFAVRVTTVPYL*
Ga0099793_102087892	3300007258	Vadose Zone Soil	LAVTDLAVLMVTVQVVPETASHPLQPLKMERRSSLTVRVTVVPLS*
Ga0099794_100437134	3300007265	Vadose Zone Soil	MVTEQVVPEKESQPLQPLKVERRSGFAVRVTTVPYL*
Ga0099795_104651343	3300007788	Vadose Zone Soil	VTDVADLTVTVQVVPETASHPLQLVKLDPVAGVAVRVTTVPYG*
Ga0066710_1010877384	3300009012	Grasslands Soil	VTSLAALMVTLQVVPETASQPSQPVKMERKPVGVAVRTTVLPLL
Ga0066710_1014196053	3300009012	Grasslands Soil	LAVTDLAALTVTVQVVPDAESQPLQPLKMERRSGVTVRVTMVP
Ga0066710_1026980302	3300009012	Grasslands Soil	LAVTDLAARMVTVQVVPETASHPLQPLKMERRFSATVRVTVVPLS
Ga0066710_1032783953	3300009012	Grasslands Soil	VTDRAALMVTVQLVPETVSQPLQLVNVDPPAALAVRVTVVPLV
Ga0066710_1033587241	3300009012	Grasslands Soil	VTDLAACMVTVQVLPETISQPLQPVKMEPKAGVAVRVTTVP
Ga0099830_104363122	3300009088	Vadose Zone Soil	MPTVQVVPETESQPVQPLKMESRSGLAVRVTTVP*
Ga0099828_101069381	3300009089	Vadose Zone Soil	VTDLEALIVTVQVAPETVSHPLQLVKVDPKAGVAVRVTTVLLS
Ga0099827_115844812	3300009090	Vadose Zone Soil	MVTVQVVPETVSQPLQPVKREPRAGVAMRVTTVPLS*
Ga0099827_116562101	3300009090	Vadose Zone Soil	MVTVQVVPESASQPLQPTKMERKPGVAVRVTTVPLV*
Ga0066709_1001135313	3300009137	Grasslands Soil	VTDVADLMVTVQVVPETASHPLQLVKLDPVAGVAVRVTTVPYG*
Ga0066709_1003219223	3300009137	Grasslands Soil	VNVAVTDLGAFMVTVQVAPETESHPLQLVKSDPVAGEAVRVTTVPTS*
Ga0066709_1018527591	3300009137	Grasslands Soil	RLKLAVTARAVLMVTLQVVPETALQPLQKAKVEPEAGVAVRVTTVPLL*
Ga0066709_1043095291	3300009137	Grasslands Soil	TVQVVPEAVSQSLQPMKMEKRFGVAVRVTTVPLL*
Ga0066709_1045451152	3300009137	Grasslands Soil	MVTVQVVPEVASQPLQPVKMERRPVGVAVRTTVLPLE*
Ga0099792_101880523	3300009143	Vadose Zone Soil	RVMPTVQVVPETESQPSQPLKMESRSGLAVRVTTVP*
Ga0075423_113469252	3300009162	Populus Rhizosphere	MKFAVTRLVLFMITVQVDPDTESQPLQPVKIDNVAGVAVSVTVVPLL*
Ga0126384_116637741	3300010046	Tropical Forest Soil	LTDLAAFMVTIQIVPETVSHPLQPKKIEIPVGVAVRVTTVLES*
Ga0134082_102159291	3300010303	Grasslands Soil	LKLTVTDLAAFILTVQVAPETASQPVQSLKLDPVAGVAVSVTTVPTS*
Ga0134088_105312193	3300010304	Grasslands Soil	TVMLKLCRLEAAVTYRAALMLTLQLVPETVSQPLQVVNVDPPAALAVRVTVVPLV*
Ga0134065_100129141	3300010326	Grasslands Soil	LKAAVTDLAALIVTVQVVSATVSHPLQPPKLDPLAG
Ga0134080_102483782	3300010333	Grasslands Soil	LAVTVLAAVMDTVQVLPETVSQPFQPVNMEKRLGVAVRVTIVPLL*
Ga0134062_101709912	3300010337	Grasslands Soil	VTDRAALIVTVQDVPETVSQPLQPPKLEPEAGLAVRVVRVPLS*
Ga0126376_103568862	3300010359	Tropical Forest Soil	LTDLAAFMVTIQIVPETVSHPLQPKKTEIPVGVAVRVTTVLES*
Ga0137364_106044282	3300012198	Vadose Zone Soil	LAVTDLAALMVTVQVVPETASHPLQPLKMEGRFAATVRVTLVPLS*
Ga0137363_108083014	3300012202	Vadose Zone Soil	VTDLAERMVTVQVVPETESQLLQLLKRERVSGFAVRVTTVPYL*
Ga0137363_115187971	3300012202	Vadose Zone Soil	MKLALTVFAALMVTVQVVPFAVSQPCQPVKMERRPDLAVSV
Ga0137399_100282394	3300012203	Vadose Zone Soil	VTDLARFMFTVQVVPDAESQPVQPVKTERSPGVSWSVTTVPET*
Ga0137399_105301804	3300012203	Vadose Zone Soil	MVTEQVVPETESQPLQPLKVERRSGFAVRVTTVPYL*
Ga0137399_110611602	3300012203	Vadose Zone Soil	VTDVADLMVTVQVVPETASHPLQLLKLDPVAGVAVRVTTVPYG*
Ga0137387_102199172	3300012349	Vadose Zone Soil	VTDRAALIVTVQLVPETVSQPLQPPKVDPLPALAVSITTVPLV*
Ga0137366_105482261	3300012354	Vadose Zone Soil	MATVQVVPETVSHPLQPVKMDPVAGVAVRVTTVPLS*
Ga0134023_10103302	3300012385	Grasslands Soil	VTDLALLMVTVQVVSETASHPSQPVKTLRRAGVAVRVT
Ga0137397_100659342	3300012685	Vadose Zone Soil	LAVTDLARFMATVQVVPDTVSQPLQPLKLERNAGAALSVTTVPDT*
Ga0137397_105243032	3300012685	Vadose Zone Soil	LAVTDLAALMVTVQVVPETASHPLQPLKLERRFSATVRVTVVPLS*
Ga0137395_103232342	3300012917	Vadose Zone Soil	VTDLAERMVTVQVVPETESQPLQLLKRERESGFAVRVTTVPYL*
Ga0137396_100229582	3300012918	Vadose Zone Soil	VTDQAERMVTVQVVPENESQPLQPLKRERESGFAVRVTTVPYL*
Ga0137396_101060242	3300012918	Vadose Zone Soil	VTDLAERMVTVQVVPETESQPLQLLKRERVSGFAVRVTTVPYL*
Ga0137396_103470064	3300012918	Vadose Zone Soil	LAVTDLARFMATVQVVPETESQPFQPLKMERNAGAARSVTTVPDT*
Ga0137396_103763133	3300012918	Vadose Zone Soil	LAVTDLAEPMVTVQVVPETASQPLQPLKTESRSGVTVSLTTVP*
Ga0137396_105632583	3300012918	Vadose Zone Soil	LAVTDLAEFMFTVQVVPETESQSFQPVKVERKAGVTRRVTTVPPL*
Ga0137394_101732482	3300012922	Vadose Zone Soil	VTVVAERMVTEQVVPEKESQPLQPLKVERGSGFAVRVTTVPYL*
Ga0137416_119571072	3300012927	Vadose Zone Soil	LAVTDLAALMVTVQVVPETASHPLQPLKVEKRSSVTVRVTVVPLS*
Ga0137404_103668373	3300012929	Vadose Zone Soil	LAVTDLAAFTVTVQIVSETVSQPFQLSKMERKPGAAVRVTTVP*
Ga0137410_100139664	3300012944	Vadose Zone Soil	VTDLAERMVTVQVVPETESQPLQLLKRERGSGFAVRVTTVPYL*
Ga0137410_101937462	3300012944	Vadose Zone Soil	LAVTDLAALMVTVQVVPETASHPLQPLKLERRFSATVRVTVVPIS*
Ga0137405_11649531	3300015053	Vadose Zone Soil	VTDLAERMVTVQVVPETESQPLQLLKRERVSGFAVRV
Ga0137403_103206004	3300015264	Vadose Zone Soil	LAVTDLAACTVTVQILSETVSQPFQLSKMERKPGVAVRVTTVP*
Ga0134089_105661771	3300015358	Grasslands Soil	LMVTLQLVPETVSQPLQLVNVDPPAGAAVRVTAVPLV*
Ga0134085_100609292	3300015359	Grasslands Soil	LAVTVLAAFMVTVQVLPEAVSQPLQPMNMDKGPGVAVRVTIVP
Ga0134085_102252622	3300015359	Grasslands Soil	LAVTVLAAVMDTVQVLPEAVSQPFQPVNMEKRPGVAVRVTIVPLL*
Ga0134112_102336711	3300017656	Grasslands Soil	RVKVAVTDLAALMVAVQLVPETVSQPLQLPKVDPPAGAAVRVTTVPLL
Ga0134083_101548882	3300017659	Grasslands Soil	VTDLAALMVRVQVVPEAVSQPSQPMKMERKLGVAVRVTVVPLL
Ga0134083_101809383	3300017659	Grasslands Soil	VTDLAELMVTLQVVPETASQPLQKAKVEPGAGVAVRTTVLPLV
Ga0066667_123317761	3300018433	Grasslands Soil	VRLNVRASKVAVTDRAALIVTAQDVPETVSQPLQPLKVEPEAAIAVSVIVVPLA
Ga0066662_109917081	3300018468	Grasslands Soil	VTVLAAFMVTVQVLPEAVSQPLQPMNMDKGPGVAVRVTIVPLL
Ga0066662_128219563	3300018468	Grasslands Soil	VTALAALMVTVQLVPETVSHPLQLVEVDPVLGVAVRVTTVPLA
Ga0179594_101019691	3300020170	Vadose Zone Soil	VTDLAERMVTVQVVPETESQLLQLLKRERVSGFAVRVTTVPYL
Ga0210381_103951863	3300021078	Groundwater Sediment	VAVTDLAALMVTVQIAPETESHPLQAVNVDPVAGVAVRVATVPGS
Ga0179584_11384651	3300021151	Vadose Zone Soil	VTDFAAVMVTVQVVPEAVSQPVQPVKTESRSGFMTRVTTVP
Ga0137417_12575383	3300024330	Vadose Zone Soil	VTDLAEFMFTVQVVPETESQSFQPVKVERKAGVTRRVTTVPPL
Ga0209235_10841863	3300026296	Grasslands Soil	VTDLAASMVTVQLVPEAVSHPLQPVKMERKAGVAVRVTTVPLS
Ga0209235_11295853	3300026296	Grasslands Soil	VTDLAALMVTVQVVPETVSQPFQPVKMERRSGVTVRVTTVP
Ga0209237_10536373	3300026297	Grasslands Soil	MVTVQVVPESVSQPLQPVKMERKPGVAVRVTTVPLV
Ga0209237_12407671	3300026297	Grasslands Soil	VLAALMVTVQVVSETVSQPLQPVKMEKKPVGVAVRTTVLPLV
Ga0209236_11910072	3300026298	Grasslands Soil	VADLAALMVTVQVVPEAASHPLQPVKIEPKVGAAVRVTT
Ga0209154_11069632	3300026317	Soil	VTDRAELIVTVQVVPETVSQPLQPVNTLPKAGVAVRVTVVPLV
Ga0209471_12029371	3300026318	Soil	MPRKLAVTDRAALMITVQVVPETASHPLHPVKREPKAGVAVRVTTVPLL
Ga0209687_12038162	3300026322	Soil	MVTVHVVFETASHPVQPLNMEPMAGVAVRVTTVLMS
Ga0209470_13536403	3300026324	Soil	ADLMVTVQVVPETASHPLQLEKLDPVAGVAVSVTTVPYG
Ga0209267_12327091	3300026331	Soil	AVTARAVLMVTLQVVPETALQPLQKAKVEPEAGVAVRVTTVPLL
Ga0209377_11123562	3300026334	Soil	VTDLAAFMVTVQVVPEAASQPLQPVKMERRPTGVAVRV
Ga0209377_12238612	3300026334	Soil	MVTVQVVPESASQPLQPMKTERKPGVAVRVTTVPLV
Ga0209804_10572522	3300026335	Soil	LAVTDLAAVMVTVQVLPETASHPLQPLKMEGRVAATVRVTVVPLS
Ga0209690_10204723	3300026524	Soil	VTVLAALMVTVQVVSETVSQPLQPVKMEKKPVGVAVRTTVLPLV
Ga0209690_11935742	3300026524	Soil	KLAVTARAPPIVTVQVVPETASQPLHAANIESKAGVAIRVTTVPLL
Ga0209058_11366024	3300026536	Soil	VTDLAELMVTVQVVPETASQPSQPVKMERKPVSVAVRTTVLPLV
Ga0209058_12633013	3300026536	Soil	VIDVADLMVTVQVVPETASHPLQLEKLDPVAGVAVSVTTVPYG
Ga0209058_13002872	3300026536	Soil	KVAVTDRAALMVTLQVVPETVSQPLQLVNVDPPAALAVRVTAEPLV
Ga0209161_100754571	3300026548	Soil	VTDLAELMVTLQVVPETVSQPSQPVKMERKPVGVAVRTTVLPLA
Ga0209161_102661292	3300026548	Soil	VTDVADLMVTVQVVPETASHPLQLVKLDPVAGVAVR
Ga0209161_103340022	3300026548	Soil	VTVQVVPETASQPSQPVKMERKPVGVAVRTTVLPLA
Ga0209577_100395584	3300026552	Soil	MPRNLAVTDLAALMVTVQVLCETISQPRQWVKIEPKAGVAVRVTTVPLV
Ga0209577_103800512	3300026552	Soil	VTDLAARMVTVQVVPETASHPLQPLKTERGFSVTARVTVAPLL
Ga0179587_101631712	3300026557	Vadose Zone Soil	VTDVADLMVTVQVVPETASHPLQLVKLDPVAGVAVRVTTAPLS
Ga0209076_11614663	3300027643	Vadose Zone Soil	VVAVRMVTEQVVPETESQPLQPLKVERRSGFAVRVTTVPYL
Ga0209283_100745511	3300027875	Vadose Zone Soil	VTDLEALIVTVQVAPETVSHPLQLVKVDPKAGVAVRVTTV
Ga0209488_100076438	3300027903	Vadose Zone Soil	VTDLAERMVTVQVVPETESQPLQLLKRERVSGFAVRVTTVPYL
Ga0209488_101470832	3300027903	Vadose Zone Soil	VTDLARFMFTVQVVPDAESQPLQPVKTERNPGLTVTVTTVPET
Ga0137415_100360874	3300028536	Vadose Zone Soil	VTDLAAFIVTVQVRPEAESQPLQPLKIERKSRLTVRVTTVPEP
Ga0137415_102671244	3300028536	Vadose Zone Soil	VTDVADLMVTVQVVPETASHPLQLVKLDPVAGVAVRVTPVALS
Ga0307468_1015717611	3300031740	Hardwood Forest Soil	MKPAVTDRAEFTVTVHVAPETESHPLQPLKSMFGLAVRVTT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F062617

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences