Metagenome / Metatranscriptome Family F062566

Basic Information
Family ID	F062566
Family Type	Metagenome / Metatranscriptome
Number of Sequences	130
Average Sequence Length	41 residues
Representative Sequence	MAYSDTYGQTVNVQTLIDHGARRCGKLAEELTSEQVLSAR
Number of Associated Samples	97
Number of Associated Scaffolds	130

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Viruses
% of genes with valid RBS motifs	86.92 %
% of genes near scaffold ends (potentially truncated)	99.23 %
% of genes from short scaffolds (< 2000 bps)	91.54 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Duplodnaviria (83.846 % of family members)
NCBI Taxonomy ID	2731341
Taxonomy	All Organisms → Viruses → Duplodnaviria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (46.923 % of family members)
Environment Ontology (ENVO)	Unclassified (78.462 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (75.385 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58. 1LBLPB2_03444530 2JGI24218J26658_100060916 3JGI25908J49247_101168123 4JGI25909J50240_10816131 5JGI25911J50253_102068513 6JGI25912J50252_100036231 7Ga0007787_102452631 8Ga0007797_10423904 9Ga0007854_101874243 10Ga0068876_102547703 11Ga0049081_101138133 12Ga0049085_100143921 13Ga0049082_102544493 14Ga0007813_11088782 15Ga0007858_10535153 16Ga0007818_10503491 17Ga0070749_106741912 18Ga0103961_13621981 19Ga0099847_12115241 20Ga0114346_10807124 21Ga0114962_106337123 22Ga0114963_106218551 23Ga0114968_101832983 24Ga0114977_102403871 25Ga0114977_106768122 26Ga0114970_105204892 27Ga0114959_102908241 28Ga0114976_101660775 29Ga0114964_102280851 30Ga0114964_102773913 31Ga0136644_106057421 32Ga0129333_103816893 33Ga0129333_112392202 34Ga0129333_114289871 35Ga0133913_116717461 36Ga0164293_102427764 37Ga0164292_109986911 38Ga0177922_104192813 39Ga0182021_127696792 40Ga0181338_10225791 41Ga0181338_10291723 42Ga0181338_10620223 43Ga0181338_10679053 44Ga0181339_10031291 45Ga0181363_10789633 46Ga0181350_10113627 47Ga0181350_10210936 48Ga0181347_11605511 49Ga0181362_10203651 50Ga0181365_11444643 51Ga0181365_11741001 52Ga0181352_11629642 53Ga0181344_11254511 54Ga0181344_12087592 55Ga0181344_12285453 56Ga0181356_10527925 57Ga0181356_12129531 58Ga0181356_12338881 59Ga0181356_12519561 60Ga0181358_10989922 61Ga0181357_10221831 62Ga0181357_10243741 63Ga0181357_11198724 64Ga0181357_11364991 65Ga0181357_11456561 66Ga0181357_13082671 67Ga0181349_12060903 68Ga0181349_12117511 69Ga0181346_10603706 70Ga0181346_12926142 71Ga0181346_13130303 72Ga0181348_10638191 73Ga0181348_10943111 74Ga0181348_12665281 75Ga0181355_11416314 76Ga0181355_13042341 77Ga0181360_1115853 78Ga0181360_1169651 79Ga0181359_10947764 80Ga0194134_102617333 81Ga0194121_104895742 82Ga0211731_100754201 83Ga0194123_101330764 84Ga0194117_105122052 85Ga0222714_103169403 86Ga0181353_10666813 87Ga0181353_10732951 88Ga0181354_11136424 89Ga0181351_11027921 90Ga0181351_11363924 91Ga0181351_12082521 92Ga0181351_12156412 93Ga0181351_12670442 94Ga0255783_103962932 95Ga0255752_102959743 96Ga0208380_10627072 97Ga0208784_10093851 98Ga0208783_100480226 99Ga0255240_10463731 100Ga0255117_10980281 101Ga0208974_10720311 102Ga0209357_11760853 103Ga0209355_12456923 104Ga0209355_12482521 105Ga0209596_10601914 106Ga0209596_12547672 107Ga0209770_101575771 108Ga0209768_100312446 109Ga0209353_101567414 110Ga0209358_105521621 111Ga0307377_106018611 112Ga0315291_114135382 113Ga0315907_112489841 114Ga0315904_106041094 115Ga0315901_107931641 116Ga0315284_122823451 117Ga0315905_109172263 118Ga0315903_108159521 119Ga0316232_12619332 120Ga0316625_1022245692 121Ga0316621_114570212 122Ga0334982_0135016_1158_1268 123Ga0335023_0603306_1_129 124Ga0335012_0185044_3_125 125Ga0335025_0569661_3_116 126Ga0335068_0320805_2_115 127Ga0335053_0756299_2_142 128Ga0335052_0656288_1_117 129Ga0335039_0407384_579_695 130Ga0348335_030532_2262_2381
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58. 1LBLPB2_03444530 2JGI25908J49247_101168123 3Ga0049085_100143921 4Ga0007858_10535153 5Ga0007818_10503491 6Ga0099847_12115241 7Ga0114346_10807124 8Ga0114977_106768122 9Ga0114964_102280851 10Ga0181350_10113627 11Ga0194134_102617333
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40 1Ga0181338_10679053 2LBLPB2_03444530 3JGI24218J26658_100060916 4JGI25908J49247_101168123 5Ga0007854_101874243 6Ga0007813_11088782 7Ga0099847_12115241 8Ga0114346_10807124 9Ga0114968_101832983 10Ga0181352_11629642 11Ga0181344_12087592 12Ga0181344_12285453 13Ga0181357_13082671 14Ga0181349_12060903 15Ga0194134_102617333 16Ga0181353_10732951 17Ga0181351_12670442 18Ga0209596_10601914 19Ga0209358_105521621 20Ga0315291_114135382 21Ga0315907_112489841 22Ga0315284_122823451 23Ga0315903_108159521 24Ga0316621_114570212 25Ga0335023_0603306_1_129 26Ga0335068_0320805_2_115
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 39.71% β-sheet: 0.00% Coil/Unstructured: 60.29%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Pfam ID	Name	% Frequency in 130 Family Scaffolds
PF00166	Cpn10	0.77
PF07460	NUMOD3	0.77
PF13392	HNH_3	0.77

COG ID	Name	Functional Category	% Frequency in 130 Family Scaffolds
COG0234	Co-chaperonin GroES (HSP10)	Posttranslational modification, protein turnover, chaperones [O]	0.77

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.15 %
Unclassified	root	N/A	3.85 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	3.08 %
Unclassified	root	N/A	3.85 %
Viruses	superkingdom	All Organisms → Viruses	93.08 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	3.08 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	83.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.38 %
Unclassified	root	N/A	3.85 %

Name	Rank	Taxonomy	Distribution
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	83.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.38 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.77 %
Unclassified	root	N/A	3.85 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.77 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.38 %
Unclassified	root	N/A	3.85 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	83.85 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.77 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	83.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.38 %
Unclassified	root	N/A	3.85 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.77 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	12.31 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	71.54 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.38 %
Unclassified	root	N/A	3.85 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.77 %
Podoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae	11.54 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.38 %
Unclassified	root	N/A	3.85 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	71.54 %

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559021\|GXP7IEG01CPELI	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	519	Open in IMG/M
3300002092\|JGI24218J26658_1000609	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	15674	Open in IMG/M
3300003277\|JGI25908J49247_10116812	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	634	Open in IMG/M
3300003393\|JGI25909J50240_1081613	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	647	Open in IMG/M
3300003411\|JGI25911J50253_10206851	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	540	Open in IMG/M
3300003412\|JGI25912J50252_10003623	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5250	Open in IMG/M
3300004240\|Ga0007787_10245263	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	879	Open in IMG/M
3300004771\|Ga0007797_1042390	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1230	Open in IMG/M
3300004806\|Ga0007854_10187424	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	890	Open in IMG/M
3300005527\|Ga0068876_10254770	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1006	Open in IMG/M

Showing 1 to 10 of 130 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	96.92%
Terrestrial	Environmental → Terrestrial	3.08%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	88.46%
Marine	Environmental → Aquatic → Marine	8.46%
Soil	Environmental → Terrestrial → Soil	3.08%

Habitat	Taxonomy	Distribution
Clay	Environmental → Terrestrial → Soil → Clay	0.77%
Coastal	Environmental → Aquatic → Marine → Coastal	6.15%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	1.54%
Lake	Environmental → Aquatic → Freshwater → Lake	26.15%
Lentic	Environmental → Aquatic → Freshwater → Lentic	56.92%
River	Environmental → Aquatic → Freshwater → River	1.54%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	3.85%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.77%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.31%

Habitat	Taxonomy	Distribution
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	0.77%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.77%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	1.54%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.54%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	56.15%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	24.62%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	6.15%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	3.85%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	1.54%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.54%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.77%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.77%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	3.85%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.77%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.77%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	7.69%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	5.38%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	3.85%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.54%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	1.54%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	0.77%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	46.92%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	10.77%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	3.85%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	3.08%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	2.31%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	0.77%
Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Lentic	0.77%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	1.54%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	1.54%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.54%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.77%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559021	Fresh water microbial communities from LaBonte Lake, Laramie, Wyoming, sample from peak-bloom 2	Environmental	Open in IMG/M
3300002092	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-B6 metagenome	Environmental	Open in IMG/M
3300003277	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD	Environmental	Open in IMG/M
3300003393	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD	Environmental	Open in IMG/M
3300003411	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SD	Environmental	Open in IMG/M
3300003412	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.DD	Environmental	Open in IMG/M
3300004240	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN	Environmental	Open in IMG/M
3300004771	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA2.5M	Environmental	Open in IMG/M
3300004806	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug08	Environmental	Open in IMG/M
3300005527	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG	Environmental	Open in IMG/M

Showing 1 to 10 of 97 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
LBLPB2_03444530	2166559021	Freshwater	MAYSGTIGETVINVQTLIDHGARRCGKLAEELTSEQQLSARQ
JGI24218J26658_100060916	3300002092	Lentic	MAYSGSVGNTVISIQTLIDHGARRCGKLAEELTDEEVLSARQS
JGI25908J49247_101168123	3300003277	Freshwater Lake	MSYSGTVGTTVVNVQEIIDHAARRCGKLAEELTSEQQLTARQSLYYFLS
JGI25909J50240_10816131	3300003393	Freshwater Lake	MAYSDTYGQTYNVQTLIDHGARRCGKLAEELTSEQVLSARQSLGF
JGI25911J50253_102068513	3300003411	Freshwater Lake	MSYSGTVGTTVVNVQEIIDHAARRCGKLAEELTSEQQLTARQSLYY
JGI25912J50252_100036231	3300003412	Freshwater Lake	MAYSGTVGTTVIDVQTLIDHGARRCGKLAEELTSEQVLSARES
Ga0007787_102452631	3300004240	Freshwater Lake	MAYSDTYGQTVNVQTLIDHGARRAGKLAEELTSEQLVSARQSLS
Ga0007797_10423904	3300004771	Freshwater	MAYSGTVGTTVINVQTLIDHGARRCGKLAEELTSEQVLSSRQ
Ga0007854_101874243	3300004806	Freshwater	MAYSGTVGNTVINVQTLIDHGARRAGKLAEELTDEQVQSAKE
Ga0068876_102547703	3300005527	Freshwater Lake	MAYSGTVGETVINVQTLIDHGARRCGKLAEELTSEQQLSARQSL
Ga0049081_101138133	3300005581	Freshwater Lentic	MAYSETYGQTVNVQTLIDHGARRCGKLAEELTSEQVLSARQSLGFL
Ga0049085_100143921	3300005583	Freshwater Lentic	MAYSNSVGTTVITVQTLIDHGARRCGKLAGELTSEQVLSSRESLFFL
Ga0049082_102544493	3300005584	Freshwater Lentic	MAYSGTVGTTVIDVQTLIDHGARRCGKLAEELTSE
Ga0007813_11088782	3300006103	Freshwater	MAYSGTVGTTVISVQQLIDHGARRCGKLAEELTSEQVLSAKESLYFFL
Ga0007858_10535153	3300006113	Freshwater	MAYSGTVGNTVINVQTLIDHGARRAGKLAEELTDEQVQSAKESLFY
Ga0007818_10503491	3300006117	Freshwater	MAYSGTFGTTVISVQTLIDHGARRCGKLAEELTDE
Ga0070749_106741912	3300006802	Aqueous	MAYSGTVGTTVIQVQTLIDHGARRCGKLAEELTSEQIL
Ga0103961_13621981	3300007216	Freshwater Lake	MAYSGTVGTTVIQVQTLIDHGARRCGKLAEELTSEQV
Ga0099847_12115241	3300007540	Aqueous	MAYSDTYGQIYSVQTLIDHGARRCGKLAEELTSEQLLSAKESLGFV
Ga0114346_10807124	3300008113	Freshwater, Plankton	MSYSNEYGQVYQIQTLIDHGARRCGKLAEELTSEQLLSARE
Ga0114962_106337123	3300009151	Freshwater Lake	MAYSGSVGTTVINVQTLIDHGARRCGKLAEELTDEQVLSS
Ga0114963_106218551	3300009154	Freshwater Lake	MAYSGTYGTTVINVQKLIDHGARRCGKLAEELTSEQVLSARE
Ga0114968_101832983	3300009155	Freshwater Lake	MAYSGTVGTTVVTVQSLIDHGARRCGKLAEELTSEQLVASRESLFFLL
Ga0114977_102403871	3300009158	Freshwater Lake	MAYSDTYGQTVNVQTLIDHGARRCGKLAEELTSEQVLSSRQSLGFLLS
Ga0114977_106768122	3300009158	Freshwater Lake	MAYSGTVGTTVVNVQEVIDHATRRCGKLAEELTSEQQ
Ga0114970_105204892	3300009163	Freshwater Lake	MAYSGTVGTTVITVQTLIDHGARRCGKLAEELTSEQVLSA
Ga0114959_102908241	3300009182	Freshwater Lake	MAYSGTSGQTVINVQTLIDHGARRCGKLAEELTSEQQISARESLF
Ga0114976_101660775	3300009184	Freshwater Lake	MAYSGTTGTTVITVQTLIDHGARRCGKLAEELTSEQV
Ga0114964_102280851	3300010157	Freshwater Lake	LRAGSADMAYSGTTGTTVVTVQTLIDHGARRCGKLASELTSEQVLSARESL
Ga0114964_102773913	3300010157	Freshwater Lake	MAYSGTSGQTVINVQTLIDHGARRCGKLAEELTSEQQISARESLFFLL
Ga0136644_106057421	3300010334	Freshwater Lake	MAYSGTVGETVISVQDLIDHGARRCGKLAEELTSEQ
Ga0129333_103816893	3300010354	Freshwater To Marine Saline Gradient	MPYSGTVGNTVINVQTLIDHGARRCGKLAEELTSE
Ga0129333_112392202	3300010354	Freshwater To Marine Saline Gradient	MAYSDTYGQVYNVQTLIDHGARRCGKLAEELTSEQILSARE
Ga0129333_114289871	3300010354	Freshwater To Marine Saline Gradient	MAYSGTVGDTVISVQTLIDHGARRCGKLAEELTSEQLLSAK
Ga0133913_116717461	3300010885	Freshwater Lake	MAYSDTYGQTVNVQTLIDHGARRAGKLAEELTSEQLVSA
Ga0164293_102427764	3300013004	Freshwater	MSYSDTYGQVFNVQTLIDHAARRCGKLAEELTSEQLL
Ga0164292_109986911	3300013005	Freshwater	MSYSGTIGTTVIDVQTLIEHGARRCGKLAEELTSEQ
Ga0177922_104192813	3300013372	Freshwater	MAYSETYGQTVNVQTLIDHGARRCGKLAEELTSEQVLSAR
Ga0182021_127696792	3300014502	Fen	MAYSDTYGQTVNVQTLIDHGARRCGKLAEELTSEQVL
Ga0181338_10225791	3300015050	Freshwater Lake	MAYSGSVGTTVITVQTLIDHGARRCGKLAEELTSEQ
Ga0181338_10291723	3300015050	Freshwater Lake	MAYSDTYGQTVNVQTLIDHGARRCGKLAAELTSEQVVSA
Ga0181338_10620223	3300015050	Freshwater Lake	MAYSDTYGQTVDVQTLIDHGARRCGKLAEELTSEQ
Ga0181338_10679053	3300015050	Freshwater Lake	MAYSDTYGQTVNVQTLIDHGARRCGKLAEELTSEQVLSAR
Ga0181339_10031291	3300017700	Freshwater Lake	MAYSNSVGTTVITVQTLIDHGARRCGKLAGELTSEQVLSSRES
Ga0181363_10789633	3300017707	Freshwater Lake	MAYSDTFGQTVNVQTLIDHGARRAGKLAEELTSEQ
Ga0181350_10113627	3300017716	Freshwater Lake	MAYSDTFGQTVNVQTLIDHGARRAGKLAEELTSEQLVSARQSLSFLLQN
Ga0181350_10210936	3300017716	Freshwater Lake	MSYSGDYGQTVINVQTLIDHGARRCGKLAEELTSEQVLSARQSLYFLL
Ga0181347_11605511	3300017722	Freshwater Lake	MAYSGTVSTTVINVQQLIDHGARRCGKLAEELTSEQQ
Ga0181362_10203651	3300017723	Freshwater Lake	MAYSDTYGQTVNVQTLIDHGARRCGKLAEELTSEQVVSA
Ga0181365_11444643	3300017736	Freshwater Lake	MAYSETYGQTVDVQTLIDHGARRCGKLAEELTSEQV
Ga0181365_11741001	3300017736	Freshwater Lake	MAYSGSVGTTVITVQTLIDHGARRCGKLAEELTSEQVLS
Ga0181352_11629642	3300017747	Freshwater Lake	MATSGTVGTTVINVQQLIDHGARRCGKLAEELTAEQQVSAREF
Ga0181344_11254511	3300017754	Freshwater Lake	MAYSDTYGQTVNVQTLIDHGARRAGKLAEELTSEQLVSARQS
Ga0181344_12087592	3300017754	Freshwater Lake	MAYSNTVGQTVLNVQTFIDHGARRCGKLAEELTSEQQLSARESLFILL
Ga0181344_12285453	3300017754	Freshwater Lake	MAYSETVGMTVINVQTLIDHGARRCGKLAEELTSEQVLSSRQ
Ga0181356_10527925	3300017761	Freshwater Lake	MAYSNSIGTTVITVQTLIDHGARRCGKLAGELTSE
Ga0181356_12129531	3300017761	Freshwater Lake	MAYSDTYGQTVDVQTLIDHGARRCGKLAEELTSEQVVSA
Ga0181356_12338881	3300017761	Freshwater Lake	MAYSDTYGQTVNVQTLIDHGARRCGKLAEELTSEQVVSARQSLGFLLSN
Ga0181356_12519561	3300017761	Freshwater Lake	MAYSDTYGQTVNVQTLIDHGARRCGKLAEELTSEQVVSARQSLG
Ga0181358_10989922	3300017774	Freshwater Lake	MSYSGTVGTTVVNVQEVIDHAARRCGKLAEELTSE
Ga0181357_10221831	3300017777	Freshwater Lake	MAYSGTVGTTVIDVQTLIDHGARRCGKLAEELTSEQV
Ga0181357_10243741	3300017777	Freshwater Lake	MAYSDTFGQTVNVQTLIDHGARRAGKLAEELTSEQLVSARQSLSFLLQNL
Ga0181357_11198724	3300017777	Freshwater Lake	MAYSETYGQTVNVQTLIDHGARRCGKLAEELTSEQVL
Ga0181357_11364991	3300017777	Freshwater Lake	MAYSDTYGQTYNVQTLIDHGARRCGKLAEELTSEQVLTSRQS
Ga0181357_11456561	3300017777	Freshwater Lake	MAYSDTYGQTVNVQTLIDHGARRCGKLAEELTSEQVVSARQSLGFLL
Ga0181357_13082671	3300017777	Freshwater Lake	MAYSGTTGTTVTTVQTLIDHGARRCGKLAGELTSEQVLSSRQSLYFLLSN
Ga0181349_12060903	3300017778	Freshwater Lake	MAYSGTVGTTVIDVQTLIEHGARRCGKLAEELTSEQQVSARESLFFFLS
Ga0181349_12117511	3300017778	Freshwater Lake	MAYSGTVGTTVIDVQTLIDHGARRCGKLAEELTSEQVQSARE
Ga0181346_10603706	3300017780	Freshwater Lake	MAYSDTYGQTVNVQTLIDHGARRCGKLAEELTSEQ
Ga0181346_12926142	3300017780	Freshwater Lake	MAYSGTVGTTVVNVQEIIDHAARRCGKLAEELTSEQQLTARQ
Ga0181346_13130303	3300017780	Freshwater Lake	MAYSDTYGQTVNVQTLIDHGARRCGKLAEELTSEQVVSAR
Ga0181348_10638191	3300017784	Freshwater Lake	MAYSDTYGQTYNVQTLIDHGARRCGKLAEELTSEQVVSARQS
Ga0181348_10943111	3300017784	Freshwater Lake	MAYSDTYGQTVNVQTLIDHGARRCGKLAEELTSEQVVSARQSL
Ga0181348_12665281	3300017784	Freshwater Lake	MAYSGTTGTTVTTVQTLIDHGARRCGKLAGELTSEQVL
Ga0181355_11416314	3300017785	Freshwater Lake	MAYSDTYGQTVNVQTLIDHGARRCGKLAEELTSEQVVSARQSLGFLLSNL
Ga0181355_13042341	3300017785	Freshwater Lake	MYSGTVGTTVISVQQLIDHGARRCGKLAEELTSEQ
Ga0181360_1115853	3300019781	Freshwater Lake	MSYSGTVGTTVVNVQEIIDHAARRCGKLAEELTSEQQLTA
Ga0181360_1169651	3300019781	Freshwater Lake	MAYSGTVGTTVIDVQTLIDHGARRCGKLAEELTSEQVQSARESLYFF
Ga0181359_10947764	3300019784	Freshwater Lake	MAYSNSVGTTVITVQTLIDHGARRCGKLAGELTSEQVLSS
Ga0194134_102617333	3300020179	Freshwater Lake	MAFSDTYGQVYKVQVLIDHAARRCGKLAEELTSEQLVT
Ga0194121_104895742	3300020200	Freshwater Lake	MAYSGTVGATTISVQTLIDHGARRCGKLAEELTSEQVLS
Ga0211731_100754201	3300020205	Freshwater	MAYSGTVGTTVVNVQELVDHAARRCGKLAEELTSEQQLTARQSLFYFLSS
Ga0194123_101330764	3300021093	Freshwater Lake	MAYSGTTGTTVISVQTLIDHGARRCGKLAEELTSEQVLSARESLFYVLS
Ga0194117_105122052	3300021424	Freshwater Lake	MAYSGTTGTTVISVQTLIDHGARRCGKLAEELTSEQ
Ga0222714_103169403	3300021961	Estuarine Water	MAYSETYGQTVNVQTLIDHGARRCGKLAEELTSEQVVSARQSL
Ga0181353_10666813	3300022179	Freshwater Lake	MAYSDTYGQTVNVQTLIDHGARRAGKLAEELTSEQLVS
Ga0181353_10732951	3300022179	Freshwater Lake	MAYSGTYGETIINVQDFIDHGARRCGKLAEELTSEQILSARQSLY
Ga0181354_11136424	3300022190	Freshwater Lake	MAYSGTVGTTVIDVQTLIDHGARRCGKLAEELTSEQVLSARD
Ga0181351_11027921	3300022407	Freshwater Lake	MAYSDTYGQTVNVQTLIDHGARRCGKLAEELTSEQVASARQSLGFLLSNLI
Ga0181351_11363924	3300022407	Freshwater Lake	MAYSDTYGQTVNVQTLIDHGARRCGKLAEELTSEQVVSARQ
Ga0181351_12082521	3300022407	Freshwater Lake	MAYSDTYGQTVNVQTLIDHGARRCGKLAEELTSEQVVS
Ga0181351_12156412	3300022407	Freshwater Lake	MAYSDTYGQTVNVQTLIDHGARRAGKLAEELTSEQLV
Ga0181351_12670442	3300022407	Freshwater Lake	MAYSDTFGQTVNVQTLIDHGARRAGKLAEELTSEQLVSARQSLSF
Ga0255783_103962932	3300022923	Salt Marsh	MAYSGTVGTTVITVQTLIDHGARRCGKLAEELTSEQVLSARES
Ga0255752_102959743	3300022929	Salt Marsh	MSYSDTYGQVFNVQTLIDHAARRCGKLAEELTSEQLLT
Ga0208380_10627072	3300025392	Freshwater	MAYSGTVGNTVINVQTLIDHGARRAGKLAEELTDEQTQSAKESLFYILSN
Ga0208784_10093851	3300025732	Aqueous	MAYSGTVGTTVIQVQTLIDHGARRCGKLAEELTSEQVLSARESLFF
Ga0208783_100480226	3300025872	Aqueous	MAYSDTYGQTVNVQTLIDHGARRAGKLAEELTSEQLVASRQ
Ga0255240_10463731	3300026568	Freshwater	MAYSDTYGQTYNVQTLIDHGARRCGKLAEELTSEQVLSSRQSLGFLLSNLI
Ga0255117_10980281	3300027600	Freshwater	MAYSDTYGQTVNVQTLIDHGARRCGKLAEELTSEQVLSARQSLGFLLSD
Ga0208974_10720311	3300027608	Freshwater Lentic	MAYSDTYGQTVNVQTLIDHGARRCGKLAEELTSEQVVSARQSLGFLLSD
Ga0209357_11760853	3300027656	Freshwater Lake	MAYSDTYGQTVNVQTLIDHGARRCGKLAEELTSEQV
Ga0209355_12456923	3300027744	Freshwater Lake	MAYSDTYGQTVDVQTLIDHGARRCGKLAEELTSEQVVSARQSLGF
Ga0209355_12482521	3300027744	Freshwater Lake	MAYSNTVGQTVLNVQTFIDHGARRCGKLAEELTSEQQLS
Ga0209596_10601914	3300027754	Freshwater Lake	MSTSGTFGQTVIDVQTLIDHGARRCGKLAEELTSEQQ
Ga0209596_12547672	3300027754	Freshwater Lake	MAYSGSVGTTVITVQTLIDHGARRCGKLAEELTSE
Ga0209770_101575771	3300027769	Freshwater Lake	MAYSGTIGQTVISVQTLIDHGARRCGKLAEELTSEQLLSARESLYFLLS
Ga0209768_100312446	3300027772	Freshwater Lake	MAYSGTVGTTVIDVQTLIDHGARRCGKLAEELTSEQVLSARESL
Ga0209353_101567414	3300027798	Freshwater Lake	MAYSETYGQTVNVQTLIDHGARRCGKLAEELTSEQVLSARQSLG
Ga0209358_105521621	3300027804	Freshwater Lake	MAYSGTVSTTVINVQELIDHGARRCGKLAEELTSEQQVASRQSLYFL
Ga0307377_106018611	3300031673	Soil	MAYSGTVGTTVVNVQELVDHAARRCGKLAEELTSEQQLT
Ga0315291_114135382	3300031707	Sediment	MAYSGTIGQTVISVQTLIDHGARRCGKLAEELAVEQVQS
Ga0315907_112489841	3300031758	Freshwater	MAYSDTYGQVFNVQTLIDHAARRCGKLAEELTSEQLVTA
Ga0315904_106041094	3300031951	Freshwater	MAYSDTYGQTVNVQTLIDHGARRCGKLAEELTSEQVLSA
Ga0315901_107931641	3300031963	Freshwater	MAYSDTYGQTVNVQTLIDHGARRAGKLAEELTSEQLVSARQSLSF
Ga0315284_122823451	3300032053	Sediment	MATSGTVGATVIDVQQLIDHGARRCGKLAEELTSEQQTSAR
Ga0315905_109172263	3300032092	Freshwater	MAYSGSVGTTVITVQTLIDHGARRCGKLAEELTSEQVLSA
Ga0315903_108159521	3300032116	Freshwater	MAYSGSVGTTVVTVQTLIDHGARRCGKLAEELTSEQVLSARES
Ga0316232_12619332	3300032605	Freshwater	MAYSGTVGNTVISVQTLIDHGARRAGKLAEELTDEQVQ
Ga0316625_1022245692	3300033418	Soil	MAYSGTVGTTVIQVQTLIDHGARRAGKVAEELTSEQVL
Ga0316621_114570212	3300033488	Soil	MAYSGTVGTTVIQVQTLIDHGARRAGKVAEELTSEQVLSARQS
Ga0334982_0135016_1158_1268	3300033981	Freshwater	MAYSDTYGQVYNVQTLIDHGARRCGKLAEELTSEQLL
Ga0335023_0603306_1_129	3300034050	Freshwater	MAYSGTFGQTVITVQTLIDHGARRCGKLAEELTSEQLLSARES
Ga0335012_0185044_3_125	3300034093	Freshwater	MAYSDTYGQTVNVQTLIDHGARRAGKLAEELTSEQLVSARQ
Ga0335025_0569661_3_116	3300034096	Freshwater	MSYSGSVGTTVINVQTLIDHGARRCGKLAEELTSEQLL
Ga0335068_0320805_2_115	3300034116	Freshwater	MAYSGTVGTTVINTQKLIDHGARRCGKLAEELTAEQIL
Ga0335053_0756299_2_142	3300034118	Freshwater	MAYSDTYGQTVNVQTLIDHGARRAGKLAEELTSEQLVSARQSLGFLL
Ga0335052_0656288_1_117	3300034279	Freshwater	MAYSDTYGQVYNIQTLIDHGARRCGKLAEELTSEQLLSA
Ga0335039_0407384_579_695	3300034355	Freshwater	MAYSDTYGQVFNVQTLIDHAARRCGKLAEELTSEQVVAA
Ga0348335_030532_2262_2381	3300034374	Aqueous	MAYSDTYGQVYNVQTLIDHGARRCGKLAEELTSEQILSAR

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F062566

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences