Metagenome / Metatranscriptome Family F062525

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F062525
Family Type	Metagenome / Metatranscriptome
Number of Sequences	130
Average Sequence Length	57 residues
Representative Sequence	MTTLQDNAVGPASQNELISPARLLLLAPSEPRAPIAILSPAKRNALVACFNAGGLHK
Number of Associated Samples	94
Number of Associated Scaffolds	130

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	99.23 %
% of genes near scaffold ends (potentially truncated)	96.15 %
% of genes from short scaffolds (< 2000 bps)	92.31 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (57.692 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (32.308 % of family members)
Environment Ontology (ENVO)	Unclassified (43.846 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.077 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 31.58% β-sheet: 0.00% Coil/Unstructured: 68.42%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 130 Family Scaffolds
PF04392	ABC_sub_bind	14.62
PF03401	TctC	6.92
PF07813	LTXXQ	3.08
PF02195	ParBc	2.31
PF00903	Glyoxalase	1.54
PF03060	NMO	1.54
PF07519	Tannase	1.54
PF01139	RtcB	0.77
PF02518	HATPase_c	0.77
PF13683	rve_3	0.77
PF00296	Bac_luciferase	0.77
PF00589	Phage_integrase	0.77
PF12728	HTH_17	0.77
PF01315	Ald_Xan_dh_C	0.77
PF07978	NIPSNAP	0.77
PF07045	DUF1330	0.77
PF00583	Acetyltransf_1	0.77
PF00534	Glycos_transf_1	0.77
PF13426	PAS_9	0.77
PF02627	CMD	0.77
PF00497	SBP_bac_3	0.77
PF01925	TauE	0.77

COG ID	Name	Functional Category	% Frequency in 130 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	14.62
COG3678	Periplasmic chaperone Spy, Spy/CpxP family	Posttranslational modification, protein turnover, chaperones [O]	12.31
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	6.92
COG0516	IMP dehydrogenase/GMP reductase	Nucleotide transport and metabolism [F]	1.54
COG2070	NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family	General function prediction only [R]	1.54
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	0.77
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	0.77
COG1690	RNA-splicing ligase RtcB, repairs tRNA damage	Translation, ribosomal structure and biogenesis [J]	0.77
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	0.77
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.77
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	0.77

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	57.69 %
Unclassified	root	N/A	42.31 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	57.69 %
Unclassified	root	N/A	42.31 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	57.69 %
Unclassified	root	N/A	42.31 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.31 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	40.00 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	2.31 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.31 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	36.15 %
unclassified Nitrospirae	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae	2.31 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.77 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.31 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	12.31 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	11.54 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	2.31 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.77 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.77 %
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.31 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	10.00 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.23 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2.31 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	2.31 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.77 %
Enterobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	0.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.77 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.31 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	9.23 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.23 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2.31 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	2.31 %
Klebsiella/Raoultella group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Klebsiella/Raoultella group	0.77 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.77 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.31 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.23 %
Bradyrhizobium altum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium altum	3.08 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2.31 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	2.31 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.77 %
Klebsiella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Klebsiella/Raoultella group → Klebsiella	0.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.77 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.31 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.23 %
Bradyrhizobium altum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium altum	3.08 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2.31 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	2.31 %
Klebsiella michiganensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Klebsiella/Raoultella group → Klebsiella → Klebsiella michiganensis	0.77 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.77 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.77 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000580\|AF_2010_repII_A01DRAFT_1012006	All Organisms → cellular organisms → Bacteria → Proteobacteria	1396	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10009038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2742	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10024024	All Organisms → cellular organisms → Bacteria	1664	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10052225	All Organisms → cellular organisms → Bacteria	911	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10081092	Not Available	693	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1043830	Not Available	631	Open in IMG/M
3300001867\|JGI12627J18819_10044437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1856	Open in IMG/M
3300004633\|Ga0066395_10459163	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300005162\|Ga0066814_10036759	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300005332\|Ga0066388_103556779	All Organisms → cellular organisms → Bacteria	795	Open in IMG/M
3300005332\|Ga0066388_104557936	Not Available	705	Open in IMG/M
3300005363\|Ga0008090_10105703	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	1126	Open in IMG/M
3300005363\|Ga0008090_10235737	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300005436\|Ga0070713_102300484	Not Available	522	Open in IMG/M
3300005518\|Ga0070699_100186005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1844	Open in IMG/M
3300005713\|Ga0066905_100311933	All Organisms → cellular organisms → Bacteria → Proteobacteria	1240	Open in IMG/M
3300005713\|Ga0066905_100489148	Not Available	1020	Open in IMG/M
3300005764\|Ga0066903_101795634	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1171	Open in IMG/M
3300005764\|Ga0066903_102262282	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1049	Open in IMG/M
3300005764\|Ga0066903_102745771	Not Available	955	Open in IMG/M
3300005764\|Ga0066903_102810281	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	944	Open in IMG/M
3300005764\|Ga0066903_105051243	Not Available	699	Open in IMG/M
3300005764\|Ga0066903_105899284	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	642	Open in IMG/M
3300005764\|Ga0066903_107097308	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	580	Open in IMG/M
3300005764\|Ga0066903_108529836	Not Available	522	Open in IMG/M
3300006846\|Ga0075430_100814017	Not Available	770	Open in IMG/M
3300006903\|Ga0075426_11392636	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	533	Open in IMG/M
3300009094\|Ga0111539_11555440	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300009100\|Ga0075418_12843038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	528	Open in IMG/M
3300009156\|Ga0111538_13985863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	510	Open in IMG/M
3300009162\|Ga0075423_12055765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	619	Open in IMG/M
3300009792\|Ga0126374_11462431	Not Available	559	Open in IMG/M
3300010046\|Ga0126384_10135628	All Organisms → cellular organisms → Bacteria	1875	Open in IMG/M
3300010046\|Ga0126384_10267396	Not Available	1390	Open in IMG/M
3300010046\|Ga0126384_10545961	Not Available	1006	Open in IMG/M
3300010046\|Ga0126384_11019469	Not Available	755	Open in IMG/M
3300010046\|Ga0126384_12361912	Not Available	514	Open in IMG/M
3300010358\|Ga0126370_10267671	All Organisms → cellular organisms → Bacteria	1336	Open in IMG/M
3300010358\|Ga0126370_10620233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	937	Open in IMG/M
3300010359\|Ga0126376_12190017	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300010360\|Ga0126372_10852410	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	908	Open in IMG/M
3300010361\|Ga0126378_10539296	Not Available	1281	Open in IMG/M
3300010366\|Ga0126379_10701957	Not Available	1105	Open in IMG/M
3300010376\|Ga0126381_101060926	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1170	Open in IMG/M
3300010376\|Ga0126381_102777755	Not Available	699	Open in IMG/M
3300010398\|Ga0126383_10784924	Not Available	1035	Open in IMG/M
3300010398\|Ga0126383_12049036	Not Available	659	Open in IMG/M
3300010398\|Ga0126383_12077259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	655	Open in IMG/M
3300010398\|Ga0126383_13677014	Not Available	501	Open in IMG/M
3300010401\|Ga0134121_11469248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	695	Open in IMG/M
3300012200\|Ga0137382_10097056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1939	Open in IMG/M
3300012202\|Ga0137363_11500567	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300012207\|Ga0137381_11039905	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	706	Open in IMG/M
3300012210\|Ga0137378_11738039	Not Available	529	Open in IMG/M
3300012211\|Ga0137377_11178888	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300012353\|Ga0137367_11023301	Not Available	562	Open in IMG/M
3300012357\|Ga0137384_10281349	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1385	Open in IMG/M
3300012359\|Ga0137385_10613850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	913	Open in IMG/M
3300012923\|Ga0137359_11505344	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300012948\|Ga0126375_10266318	Not Available	1170	Open in IMG/M
3300012948\|Ga0126375_11894756	Not Available	523	Open in IMG/M
3300012971\|Ga0126369_10225205	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1828	Open in IMG/M
3300012971\|Ga0126369_13466712	Not Available	517	Open in IMG/M
3300016270\|Ga0182036_11672293	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300016294\|Ga0182041_11036030	Not Available	743	Open in IMG/M
3300016357\|Ga0182032_10833578	Not Available	781	Open in IMG/M
3300016357\|Ga0182032_10998216	Not Available	715	Open in IMG/M
3300016387\|Ga0182040_10213179	Not Available	1428	Open in IMG/M
3300016387\|Ga0182040_10287061	Not Available	1252	Open in IMG/M
3300016422\|Ga0182039_10822549	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	825	Open in IMG/M
3300016445\|Ga0182038_11833169	Not Available	548	Open in IMG/M
3300021439\|Ga0213879_10008929	All Organisms → cellular organisms → Bacteria → Proteobacteria	2119	Open in IMG/M
3300021477\|Ga0210398_11049920	Not Available	648	Open in IMG/M
3300021477\|Ga0210398_11370020	Not Available	554	Open in IMG/M
3300021560\|Ga0126371_11050137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	955	Open in IMG/M
3300021560\|Ga0126371_12781074	Not Available	593	Open in IMG/M
3300027646\|Ga0209466_1001792	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4358	Open in IMG/M
3300027874\|Ga0209465_10049416	Not Available	2009	Open in IMG/M
3300031543\|Ga0318516_10051466	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2242	Open in IMG/M
3300031545\|Ga0318541_10245974	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	993	Open in IMG/M
3300031546\|Ga0318538_10043273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium altum	2170	Open in IMG/M
3300031572\|Ga0318515_10420811	All Organisms → cellular organisms → Bacteria → Proteobacteria	715	Open in IMG/M
3300031573\|Ga0310915_10107483	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1892	Open in IMG/M
3300031573\|Ga0310915_10178134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1480	Open in IMG/M
3300031573\|Ga0310915_10749429	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	688	Open in IMG/M
3300031668\|Ga0318542_10654375	Not Available	549	Open in IMG/M
3300031681\|Ga0318572_10414764	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300031682\|Ga0318560_10040276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium altum	2260	Open in IMG/M
3300031713\|Ga0318496_10157123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1243	Open in IMG/M
3300031719\|Ga0306917_10413233	Not Available	1054	Open in IMG/M
3300031720\|Ga0307469_12004229	Not Available	562	Open in IMG/M
3300031765\|Ga0318554_10155700	All Organisms → cellular organisms → Bacteria	1298	Open in IMG/M
3300031768\|Ga0318509_10066698	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1879	Open in IMG/M
3300031793\|Ga0318548_10045369	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium altum	1990	Open in IMG/M
3300031796\|Ga0318576_10377143	Not Available	670	Open in IMG/M
3300031820\|Ga0307473_11387887	Not Available	529	Open in IMG/M
3300031833\|Ga0310917_10093807	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1921	Open in IMG/M
3300031833\|Ga0310917_10264207	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1160	Open in IMG/M
3300031833\|Ga0310917_11152685	Not Available	516	Open in IMG/M
3300031846\|Ga0318512_10379100	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	709	Open in IMG/M
3300031879\|Ga0306919_10147810	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1711	Open in IMG/M
3300031880\|Ga0318544_10128518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Klebsiella/Raoultella group → Klebsiella → Klebsiella michiganensis	965	Open in IMG/M
3300031896\|Ga0318551_10016999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	3304	Open in IMG/M
3300031897\|Ga0318520_10633274	Not Available	666	Open in IMG/M
3300031910\|Ga0306923_11048214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	882	Open in IMG/M
3300031912\|Ga0306921_11398547	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	769	Open in IMG/M
3300031945\|Ga0310913_10274602	Not Available	1186	Open in IMG/M
3300031947\|Ga0310909_10311337	Not Available	1320	Open in IMG/M
3300031947\|Ga0310909_10525421	All Organisms → cellular organisms → Bacteria	991	Open in IMG/M
3300031954\|Ga0306926_11027271	Not Available	979	Open in IMG/M
3300031954\|Ga0306926_11593766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	749	Open in IMG/M
3300031981\|Ga0318531_10129123	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1125	Open in IMG/M
3300032001\|Ga0306922_10435294	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1402	Open in IMG/M
3300032010\|Ga0318569_10389099	Not Available	650	Open in IMG/M
3300032035\|Ga0310911_10449285	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	747	Open in IMG/M
3300032042\|Ga0318545_10021081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium altum	2075	Open in IMG/M
3300032042\|Ga0318545_10203105	Not Available	709	Open in IMG/M
3300032043\|Ga0318556_10595863	Not Available	577	Open in IMG/M
3300032043\|Ga0318556_10742352	Not Available	510	Open in IMG/M
3300032044\|Ga0318558_10665781	Not Available	520	Open in IMG/M
3300032054\|Ga0318570_10167921	All Organisms → cellular organisms → Bacteria	985	Open in IMG/M
3300032059\|Ga0318533_10269712	All Organisms → cellular organisms → Bacteria	1231	Open in IMG/M
3300032065\|Ga0318513_10390298	Not Available	679	Open in IMG/M
3300032076\|Ga0306924_10244179	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2062	Open in IMG/M
3300032089\|Ga0318525_10264833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	883	Open in IMG/M
3300032090\|Ga0318518_10537295	Not Available	598	Open in IMG/M
3300032180\|Ga0307471_100617330	Not Available	1244	Open in IMG/M
3300032261\|Ga0306920_100715033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1475	Open in IMG/M
3300033289\|Ga0310914_10549634	Not Available	1043	Open in IMG/M
3300033289\|Ga0310914_11778782	Not Available	520	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.38%
Host-Associated	Host-Associated	4.62%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.38%
Plants	Host-Associated → Plants	4.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.38%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	81.54%
Loam	Environmental → Terrestrial → Soil → Loam	13.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.62%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	52.31%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.62%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.54%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.54%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	32.31%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	18.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.08%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	11.54%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.62%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.62%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.31%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.54%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	1.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.77%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.77%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.77%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021439	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027646	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A01DRAFT_10120062	3300000580	Forest Soil	MTTLQDNAMGPAFQNELISPARLLLLAPNEPRAPIAILSPAKRNALVACFNAGGLHKK
AF_2010_repII_A1DRAFT_100090381	3300000597	Forest Soil	MTTLQETSVGPASQNELICPAHLLLLAPSEPRAPIAILSPAKRNALVACFNAGGLHKKDGAWHGPPGG
AF_2010_repII_A1DRAFT_100240243	3300000597	Forest Soil	MTTLQDTAVGPASQDEPRAPIAILSPAKRNALVACFNAGGLHKKDGAWH
AF_2010_repII_A001DRAFT_100522254	3300000793	Forest Soil	MTTLQDNAVGPAFQKELISPARSLLLAPSEPRAPIAILSPAKRNALVACFNAGGLHK
AF_2010_repII_A001DRAFT_100810923	3300000793	Forest Soil	MTTLQDAAVGPASQNEPRAPVAILSPAKRNALVACFNAGGLHK
AP72_2010_repI_A100DRAFT_10438301	3300000837	Forest Soil	MTALQDNAVGPAFQNELISPARSLLLAPSEPRAPIAILSPAKRNALVACFNAGGLHKKDGAWHGPP
JGI12627J18819_100444374	3300001867	Forest Soil	MTTLQDAAVGPASRNELISPAPLLLLAPSEPRAPIAILSPAKRNALVACFNAGGLHKKDGAWHGP
Ga0066395_104591631	3300004633	Tropical Forest Soil	MTTLQDSAVGPASQNELISPARLLLLAPSEPPAPIAILSPAKRNA
Ga0066814_100367592	3300005162	Soil	MTTLQDTAVGRASQNELISPARLLLLAPSEPRAPIAILSPAKRNALVACFNAG
Ga0066388_1035567791	3300005332	Tropical Forest Soil	MTTLQGSAVGPASQNELISPARLLLLAPSEPPAPIAILSPAKRNA
Ga0066388_1045579361	3300005332	Tropical Forest Soil	MTTLQDNEPASRSELISPSPVLLLAPSEPRAPIAILSPAKRNALVA
Ga0008090_101057032	3300005363	Tropical Rainforest Soil	MTTLQDNAMGPAFQNELISPARLLLLAPNEPRAPIAILSPAKRNAL
Ga0008090_102357371	3300005363	Tropical Rainforest Soil	MTTLQDTSVGPASQNELICPARLLLLAPSEPRAPIAILSPAKRNALVACFN
Ga0070713_1023004841	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MTTLQDTAVGPASQNELISPARLLLLAPSEPRAPIAILSPAKRNALVACFNAGG
Ga0070699_1001860055	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MTTLQDNAVGPASQNELISPARLLLLAPSEPRAPIAILSPAKRNALVAC
Ga0066905_1003119331	3300005713	Tropical Forest Soil	MTTLQDTSVGPASQNELICPARLLLLAPSEPRAPIAILSPTKRNALVACFNAGGLHKKDGAWHGPPGGKPVSGMTTADLA
Ga0066905_1004891481	3300005713	Tropical Forest Soil	MTTLQDNAVGPAFQNELISPARSLLRAPSEPRAPIAILSPAKRNALVACFNAGGLHKKDGAWHGP
Ga0066903_1017956341	3300005764	Tropical Forest Soil	MTTLQDAAVSPASQNELISPARLLLLAPSEPRAPIAILSPAKRNALVAC
Ga0066903_1022622821	3300005764	Tropical Forest Soil	MTTLQDAAVGSASQNDCPARLLLLAPSEPRAPIAILSPAKRNALVACFNAGGLHK
Ga0066903_1027457713	3300005764	Tropical Forest Soil	MTTLQDTAVGPASQDEPARLLLLAPSEPRAPIAILSSAKRNALVACFNAGGLHKKDGAWHGLPGGKPVSGMTTADL
Ga0066903_1028102813	3300005764	Tropical Forest Soil	MTTLQDTAVGPASQDEPRAPIAILSPAKRNALVACF
Ga0066903_1050512432	3300005764	Tropical Forest Soil	MTTLHDAAVGPASHNELICSARLLLLAPGEPRAPIAILSPAKRNALVACFNAGGLHKKDGAWHGPPGG
Ga0066903_1058992842	3300005764	Tropical Forest Soil	MTTLQDNAVGPAFQNELISPARLLLLTPSEPRAPIAILSPAKRNALVACFNAGGLHKKDGAWHGPP
Ga0066903_1070973081	3300005764	Tropical Forest Soil	MTTLQDTAVGPASQNELIRRGRLLLAPSEPRAPIAILSPAKRNALVACFNAGGLHKKDGA
Ga0066903_1085298361	3300005764	Tropical Forest Soil	MTTLQDNAVEPASRSELISPSPVLLLAPSEPRAPIAILSPAKRNALVAC
Ga0075430_1008140172	3300006846	Populus Rhizosphere	MTTLQDNAVEPASRSELISPSPVLLLAPSEPRAPIAILSPAKRNALVVCFNAGGLHKRDGAWHGLPGGK
Ga0075426_113926361	3300006903	Populus Rhizosphere	MTTLQDTTVGPASQDEPRAPIAILSRAKRNALVACFNAGGLQKKDGAWHG
Ga0111539_115554401	3300009094	Populus Rhizosphere	MTTLQDTTVGPASQDEPRAPIAILSRAKRNALVACFNAGGLQKKDGAWH
Ga0075418_128430381	3300009100	Populus Rhizosphere	MTTLQDTTVGPASQHEPRAPIAILSRAKRNALVACFDAGGLLKKDGAWHGLPGGKPVSA*
Ga0111538_139858631	3300009156	Populus Rhizosphere	MTTLQNTAVGPASQNELISPARLLLLAPSEPRAPIAILSPAKRNALVACFNAGGLHKKGGAW
Ga0075423_120557651	3300009162	Populus Rhizosphere	MTTLQDTTVGPASQHEPRAPIAILSPAKRNALVACFNAGG
Ga0126374_114624311	3300009792	Tropical Forest Soil	MTTLQDTAVGPASQNELISPARLLLLVPSEPRAPIAILSPAKRNALVACFNAGR
Ga0126384_101356282	3300010046	Tropical Forest Soil	MTTLQDSAVGPASQNELISPARLLLLAPSEPPAPIAILSTAKRNALVACFNAGGLHKKDGAWHGPPGGKAVSGMTTADL
Ga0126384_102673962	3300010046	Tropical Forest Soil	MTTLQDNAVDPTFQNELISPARLLLLAPSEPRAPIAILSPAKRNALVACFNAGGLHK
Ga0126384_105459611	3300010046	Tropical Forest Soil	MTTLQDTAAGPASQDEPRAPIAILSPAKRNALVACFNAGGLHKKDG
Ga0126384_110194691	3300010046	Tropical Forest Soil	MTTLQDTAVGPASQNELICPARLLLLAPGEPRAPIAILSPAKRNALVACFNAGGLHKKDGAWHGPPD
Ga0126384_123619122	3300010046	Tropical Forest Soil	MTTLHDAAVGPASQNDCPARLLLLAPSEPRAPIAILSPSKRNALVASFNAGGLH
Ga0126370_102676711	3300010358	Tropical Forest Soil	MTTLQDNTVGPAFQNELISPARSLLLAPSEPRAPIAILSPAKRNALVVCFNAGGLHKKDGAWH
Ga0126370_106202331	3300010358	Tropical Forest Soil	MTTLQDTAAVGPASQNELISPARLLLLAPSEPRAPIAILSPAKRNALVACFNAGRLHK
Ga0126376_121900171	3300010359	Tropical Forest Soil	MTTLQDSAVGPASQNELISPARLLLLAPSEPPAPIAILSTAKRNALVACFNAGGLHKKDGAWHGPPGGKAASGMTTADLA
Ga0126372_108524102	3300010360	Tropical Forest Soil	MTTLQDTAVGPASQNELISPARLLLLVPSEPRAPIAILSPAKRNALVACFNAGRLH
Ga0126378_105392961	3300010361	Tropical Forest Soil	MTTLQDTAAGPASQDEPRAPIAILSPAKRNALVACFNAGGLHKKDGSWH
Ga0126379_107019572	3300010366	Tropical Forest Soil	MITLQDNTVEPASLSELISPSPGLLHAPSEPRAPIAILSPAKRNALVACFNAGGL
Ga0126381_1010609261	3300010376	Tropical Forest Soil	MTTLQDNAVDPTFQNELISPARLLLLAPSEPRAPIAILSPAKRNALVACF
Ga0126381_1027777552	3300010376	Tropical Forest Soil	MTTLQDNAVGPAFQNELISPWRLLLLTPSEPRAPIAILSPAKRNALVACFNAGGLHKK
Ga0126383_107849243	3300010398	Tropical Forest Soil	MTTLQDSAVGPASQNELISPARLLLLVPSEPPAPIAILSPAKRNALVACFNAGGLHKKDGAWHG
Ga0126383_120490363	3300010398	Tropical Forest Soil	MTTLQDTAVSPASRDEPRAPIAILSPAKRNALVAC
Ga0126383_120772591	3300010398	Tropical Forest Soil	MTTLQDNAVDPTFQNELISPARLLLLAPSEPRAPIAILSPAKRNALVACFNA
Ga0126383_136770141	3300010398	Tropical Forest Soil	MTTLQDTAVGPASQNELICPARLLLLAPSEPRAPIAILSPAKRNALVACF
Ga0134121_114692482	3300010401	Terrestrial Soil	MTTLQDTTVGPASQDEPRAPIAILSRAKRNALVACFN
Ga0137382_100970562	3300012200	Vadose Zone Soil	MTTLQDNAVEPTSRSELIFPSPVLLLAPSEPRAPIAILSPAKRNALVACFNAGGLHKRDGAWHGLPVASQYPA*
Ga0137363_115005672	3300012202	Vadose Zone Soil	MTTLQDTAEGPASQNELISPARLLLLAPSEPRAPIAILSPAKRNALVACFNAGGLHKKDGAWHGPPDGKP
Ga0137381_110399051	3300012207	Vadose Zone Soil	MTTLQDNAVGPASRNELISPARLLLLAPSEPRAPIAILSPAKRNALVACFNAGG
Ga0137378_117380391	3300012210	Vadose Zone Soil	MTTLEDNAVEPASRSELISPSPVLLLAPSEPRAPIAILSPAKRNALVACFNAGGL
Ga0137377_111788881	3300012211	Vadose Zone Soil	MTTLQDTAVGPASQNELISPARLLLLAPSEPRAPIAILSPAKRNALVAC
Ga0137367_110233011	3300012353	Vadose Zone Soil	MTTLQDNAVEPASRSELISPSPVLLLAPSEPRAPIAILSPAKRNALVACFN
Ga0137384_102813491	3300012357	Vadose Zone Soil	MTTLQDNAVGPASRNELISPARLLLLAPSEPRAPIAILSPAKRNALVACFNAGGLHKKDGAWHGPPGGK
Ga0137385_106138501	3300012359	Vadose Zone Soil	MTTLQASQNELISPARLLLLAPSEPRAPIAILSPAKRNALVACFNAGG
Ga0137359_115053441	3300012923	Vadose Zone Soil	MTTLQDTAVGPASQNELISPARLLLLAPSEPRAPIAILSPAKRNALV
Ga0126375_102663181	3300012948	Tropical Forest Soil	MTTLQDTAAGPASQDEPRAPIAILSPAKRNALVACFNAG
Ga0126375_118947561	3300012948	Tropical Forest Soil	MTTLQDTAVGPASQDEPRAPIAILSPAKRNALVACFNAGGLQKKEG
Ga0126369_102252052	3300012971	Tropical Forest Soil	MTTLQDTAVGPASQNELISPARLLLLVPSEPRAPIAILSPAKRNALVACFNAGRLHKKDGAWHGPPGGKPVSGGRPPTSREMEC*
Ga0126369_134667121	3300012971	Tropical Forest Soil	MTTLQDTSVGPASQNELICPARLLLLAPSEPRAPIAILSPAKRNALVACFNAGGLHKKDGAWHGPPG
Ga0182036_116722931	3300016270	Soil	MTTLQDTAVGPASRDQPRAPIAILSPAKRNALVACFNAGGLHK
Ga0182041_110360301	3300016294	Soil	MTTTTLQDNAVEPASRSELISPSPVLLLAPSEPRAPIAILSPAKRNALVACFNAGGLHK
Ga0182032_108335781	3300016357	Soil	MTTTTLQDNAVEPASRSELISPSPVLLLAPSEPRAPIAILSPAKRNALVACFNAGGLHKRDGAWHGLPGGKPVS
Ga0182032_109982161	3300016357	Soil	MTTLQDNAVEPASRSELISPSPVLLLAPSEPHAPIAILSPAKRNALVACFNAGGLHKRDGAWHGLPGGKPVS
Ga0182040_102131792	3300016387	Soil	MTTLQDATVGPASQNELICPARLLLLASEPRAPIAILSPAKRNALV
Ga0182040_102870612	3300016387	Soil	MTTLQDNAVEPASRSKLISPSPVLLLAPSEPRAPIAILSPAKRNALVACFN
Ga0182039_108225493	3300016422	Soil	MTTLQDNAVGPAFQNELISPARSLLLAPSEPRAPIAILSPAKRNALVACFNAGG
Ga0182038_118331691	3300016445	Soil	MTTLQDATVGPASQNELICPARLLLLASEPRAPIAILSPAKRNALVACFN
Ga0213879_100089293	3300021439	Bulk Soil	MTTLQDTAVGPASQDEPRAPIAILSPAKRNALVACFNAGGLHKK
Ga0210398_110499201	3300021477	Soil	MLQDKNVEPALQSEMISPSYLPLLAPGERPAPIAFLSPSKRNALVACFHSDG
Ga0210398_113700201	3300021477	Soil	MTILQDAELEPEALLPLAPSEPRALVAILSAAKRNALVACFNGSGLHKKDGAWHGLPDGKPVSGVTVADLARD
Ga0126371_110501372	3300021560	Tropical Forest Soil	MTTLQDNAVGPAFQNELISPVRLLLLAPSEPRAPIAILSPAKRNALVACFNAGGLH
Ga0126371_127810741	3300021560	Tropical Forest Soil	MTTLQDNAVEPASRSELISPSPDLLLAPSEPRAPIAILSPAKRNALVACFNAGGL
Ga0209466_10017923	3300027646	Tropical Forest Soil	MTTLQDSAVGPASQNELISPARLLLLAPSEPRAPIAILSPAKRNALVACFNAGGLHKKDGAWHGPPGPARPAAGRKAIC
Ga0209465_100494161	3300027874	Tropical Forest Soil	MTTLQDSAVGPASQNELISPARLLLLAPSEPPAPIAILSTAKRNALVACFNAGGL
Ga0318516_100514664	3300031543	Soil	MTTTTLQDNAVEPASRSELISPSPVLLLAPSEPRAPIAILSPAKRNALVACFNAGGLHKR
Ga0318541_102459744	3300031545	Soil	MTTLQDTAVGPASQDEPRAPIAILSPAKRNALVACFNAGRLHKKDGSWHG
Ga0318538_100432733	3300031546	Soil	MTTLQDNAVGPPFQNELISPARSLLLAPSEPRAPIAILSPAKRNALIACFNAGGLHKRDGAWHGPPDGKPV
Ga0318515_104208111	3300031572	Soil	MTTLQDNAVGPPFQNELISPARSLLLAPSEPRAPIAILSPAKRNALIACFNAG
Ga0310915_101074831	3300031573	Soil	MTTLQDSAVGPASQNELISPARLLLLVPSEPPAPIAILSPAKRNALVACFNAGGLHKKDGAWHGPL
Ga0310915_101781342	3300031573	Soil	MTTLQDNAVGPAFQNELISPARLLLLAPVEPRAPIAILSPAKRNALVACFNAGGLHKKDGAWHGPPGG
Ga0310915_107494291	3300031573	Soil	MTTLQDNAVGPAFQNELISPARSLLLAPSEPRAPIAILSPAKRNALVACFNAGGLHKKDGAWHGQP
Ga0318542_106543751	3300031668	Soil	MTTLQDATVGPASQNELICPARLLLLASEPRAPIAILSPAKRNALVACFNAGE
Ga0318572_104147642	3300031681	Soil	MTTLQDSAGGPASQNKLISPARLLLLAPSEPPAPIAILSPAKRNALVACFNAGGLHK
Ga0318560_100402763	3300031682	Soil	MTTLQDNAVGPPFQNELISPARSLLLAPSEPRAPIAILSPAKRNALIACFNAGGLHKRDGAWHGPPDG
Ga0318496_101571231	3300031713	Soil	MTTLQDNAVGPAFQNELISPARSLLLAPSEPRAPIAILSPAKRNALIACFNAGG
Ga0306917_104132332	3300031719	Soil	MTTLQDNAVEPASRSELISPSPVLLLAPSEPRAPIAILSPAKRNALVACFNAGGLHKR
Ga0307469_120042291	3300031720	Hardwood Forest Soil	MTTLQDNAVGPASQNELISPARLLLLAPSEPRAPIAILSPAKRNALVACFNAGGLHKKDGAWHG
Ga0318554_101557001	3300031765	Soil	MTTLQDSAGGPASQNKLISPARLLLLAPSEPPAPIAILSPAKRNALVA
Ga0318509_100666984	3300031768	Soil	MTTLQDNAVGPPFQNELISPARSLLLAPSEPRAPIAILSPAKRNALVACFNAGGLHKKDGAWHGPP
Ga0318548_100453693	3300031793	Soil	MTTLQDNAVGPPFQNELISPARSLLLAPSEPRAPIAILSPAKRNALI
Ga0318576_103771433	3300031796	Soil	MTTLQDNAVGPPFQNELISPARSLLLAPSEPRAPIAILSPAKRNALIACFNAGGLHKR
Ga0307473_113878872	3300031820	Hardwood Forest Soil	MTTLQDNAVGPASQNELISPARLLLLAPSEPRAPIAILSPAKRNALVACFNAGGLHK
Ga0310917_100938074	3300031833	Soil	MTTLQDSAVGPASQNELISPARLLLLVPSEPPAPIAILSPAKRNA
Ga0310917_102642074	3300031833	Soil	MTTLQDTAVGPASQDEPRAPIAILSPAKRNALVACFNAGGLQKKDGAWHGLPGGK
Ga0310917_111526851	3300031833	Soil	MTTTTLQDNAVEPASRSELISPSPVLLLAPSEPRAPIAILSPAKRNALVAC
Ga0318512_103791001	3300031846	Soil	MTTLQDTAVGPASQNELISPARLLLLAPSEPRAPIAILSPAKRNALVACFNAGRLHKKDGAWHGPPGGKPVS
Ga0306919_101478101	3300031879	Soil	MTTLQDNAVGPAFQNELISPARSLLLAPSEPRAPIAILSPAKRDALVA
Ga0318544_101285181	3300031880	Soil	MTTLQDNAVGPPFQNELISPARSLLLAPSEPRAPIAILSPAKRNALIACFNAGGLHKRDG
Ga0318551_100169991	3300031896	Soil	MTTLQDNAVGPPFQNELISPARSLLLAPSEPRAPIAILSPAKRNALIACFNAGGLHKRDGAWHGPP
Ga0318520_106332741	3300031897	Soil	MTTLQDNAVEPASRSELISPSPVLLLAPSEPRAPIAILSPAKRNALVACFNAGGLHK
Ga0306923_110482142	3300031910	Soil	MTTLQDNAVGPAFQNELISPARLLLLAPSEPRAPIAILSPAKRNALVACFN
Ga0306921_113985471	3300031912	Soil	MTTTTLQDNAVEPASRSELISPSPVLLLAPSEPRAPIAILSPAKRNALVACFNAGGLHKRDGAWHGL
Ga0310913_102746022	3300031945	Soil	MTTLQDNAVEPASRSELISPSPVLLLAPSEPRAPIAILSPAKRNALVACFNAGGLHKRDGAWHGLPGGKSVS
Ga0310909_103113371	3300031947	Soil	MTTLQDATVGPASQNELICPARLLLLASEPRAPIAILSPAKRNALVACFNAG
Ga0310909_105254213	3300031947	Soil	MTTLQDNAVGPAFQNELISPARLLLLAPVEPRAPIAILSPAKRNALVACFNAGGLHKKDGAWHGPP
Ga0306926_110272712	3300031954	Soil	MTTLQDNAVQPTSRSELLSSAPLLLLTPSEPRAPIAILSAAKRNALAACFNAGGLHKKDGAWHGSPGGQP
Ga0306926_115937663	3300031954	Soil	MTTLQDNAVGPAFQNELISPARSLLLAPSEPRAPIAILSPAKRNALVACFNAGGLH
Ga0318531_101291234	3300031981	Soil	MTTLQDTAVGPASQDEPRAPIAILSPAKRNALVACFNAGGLQKKD
Ga0306922_104352942	3300032001	Soil	MTTLQDNAVGPPFQNELISPARSLLLAPSEPRAPIAILSPAKRNALIACFNAGGLHK
Ga0318569_103890991	3300032010	Soil	MTTLQDNAVEPASRSELISPSPVLLLAPSEPHAPIAILSPAKRNALVACFNAGGLHK
Ga0310911_104492852	3300032035	Soil	MTTLQDNAVGPAFQNELISPARLLLLAPVEPRAPIAILSPAKRNALVACFNAGGLHKKDGAWHGPPG
Ga0318545_100210813	3300032042	Soil	MTTLQDNAVGPPFQNELISPARSLLLAPSEPRAPIAILSPAKRNALIACFNAGGLHKRDGAW
Ga0318545_102031052	3300032042	Soil	MTTLQDNAVEPASRSELISPSPVLLLAPSEPRAPIAILSPAKRNALVACFNAGGLHKRDGAWHGLPGG
Ga0318556_105958631	3300032043	Soil	MTTLQDNAVEPASRSELISPSPVLLLAPSEPRAPIAILSPAKRNALVACFNAGGLHKRDGAWHGLPG
Ga0318556_107423521	3300032043	Soil	MTTLQDSAGGPASQNKLISPARLLLLAPSEPPAPIAILSPAKRNALVACFNAGGLHKKD
Ga0318558_106657811	3300032044	Soil	MTTLQDTAVGPASQDEPRAPIAILSPAKRNALVACFNAGGLQKKDGAWHGLPG
Ga0318570_101679211	3300032054	Soil	MTTLQDSAGGPASQNKLISPARLLLLAPSEPPAPIAILSPAKRNALVACFNAGGLH
Ga0318533_102697123	3300032059	Soil	MTTLQDNAVDPTFQNELISPARLLLLAPSEPRAPIAILSPAKRNALVACFNAGGLHKRDGAWHGPPDG
Ga0318513_103902981	3300032065	Soil	MTTLQDATVGPASQNELICPARLLLLASEPRAPIAILSPAKRNA
Ga0306924_102441791	3300032076	Soil	MTTLQDAAVGSASQNDCPARLLLLAPSEPRAPITILSPAKRNALVACFNAGGLHKKDGAW
Ga0318525_102648332	3300032089	Soil	MTTLQDNAVEPASRSKLISPSPVLLLAPSEPRAPIAILSPAKRNALVACFNAGGLHKRDGAWH
Ga0318518_105372952	3300032090	Soil	MTTLQDNAVEPASRSELISPSPVLLLAPSEPRAPIAILSPAKRNALVACFNAGGLHKRDGAWHGLPGGKPVS
Ga0307471_1006173301	3300032180	Hardwood Forest Soil	MTTLQDTAVGPASQNELISPARLLLLAPSEPRAPIAILSPAKRNALVA
Ga0306920_1007150331	3300032261	Soil	MTTLQDNAVGPTFHNELISPARLLLLAPSEPRAPIAILSPAKRNALVACFNAGRLHKKDGAWHGPPGGKP
Ga0310914_105496341	3300033289	Soil	MTTLQDNAVGPAFQNELISCAMLLAPSEPRAPIAILSPAKRNALLACFN
Ga0310914_117787821	3300033289	Soil	MTTLQDNAVQPTSRSELLSSAPLLLLTPSEPRAPIAILSAAKRNALAACFN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F062525

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences