Metagenome / Metatranscriptome Family F062284

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F062284
Family Type	Metagenome / Metatranscriptome
Number of Sequences	131
Average Sequence Length	88 residues
Representative Sequence	VSRRDRAFHRHAQAVLEHELLRARKRLAALPEERRSALEDVTAQVVAAVVDSVLEESRREPALARALGSIYGPEPAWEPRVVSWATD
Number of Associated Samples	101
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	53.44 %
% of genes near scaffold ends (potentially truncated)	37.40 %
% of genes from short scaffolds (< 2000 bps)	81.68 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.56

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (35.114 % of family members)
Environment Ontology (ENVO)	Unclassified (32.824 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.015 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.52% β-sheet: 0.00% Coil/Unstructured: 43.48%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.56
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.56
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF03100	CcmE	45.04
PF16327	CcmF_C	3.82
PF01578	Cytochrom_C_asm	1.53
PF02518	HATPase_c	1.53
PF00196	GerE	0.76
PF01566	Nramp	0.76
PF00115	COX1	0.76
PF03597	FixS	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG2332	Cytochrome c biogenesis protein CcmE	Posttranslational modification, protein turnover, chaperones [O]	45.04
COG1914	Mn2+ or Fe2+ transporter, NRAMP family	Inorganic ion transport and metabolism [P]	0.76
COG3197	Cytochrome oxidase maturation protein, CcoS/FixS family	Posttranslational modification, protein turnover, chaperones [O]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	70.99 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	70.99 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	61.07 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	61.07 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	61.07 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001361\|A30PFW6_1239224	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	628	Open in IMG/M
3300001538\|A10PFW1_10272098	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	878	Open in IMG/M
3300004114\|Ga0062593_102383131	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	597	Open in IMG/M
3300004153\|Ga0063455_101699397	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	501	Open in IMG/M
3300004156\|Ga0062589_102197520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	565	Open in IMG/M
3300004157\|Ga0062590_100146395	All Organisms → cellular organisms → Bacteria	1608	Open in IMG/M
3300005178\|Ga0066688_10727099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	628	Open in IMG/M
3300005181\|Ga0066678_10079115	All Organisms → cellular organisms → Bacteria	1945	Open in IMG/M
3300005450\|Ga0066682_10397584	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	883	Open in IMG/M
3300005456\|Ga0070678_101909522	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300005518\|Ga0070699_100020192	All Organisms → cellular organisms → Bacteria	5742	Open in IMG/M
3300005549\|Ga0070704_100556096	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1003	Open in IMG/M
3300005555\|Ga0066692_10409361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	861	Open in IMG/M
3300005559\|Ga0066700_10963883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	563	Open in IMG/M
3300005598\|Ga0066706_10353693	All Organisms → cellular organisms → Bacteria	1165	Open in IMG/M
3300006031\|Ga0066651_10504256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	641	Open in IMG/M
3300006034\|Ga0066656_10392279	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300006034\|Ga0066656_10906246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	565	Open in IMG/M
3300006046\|Ga0066652_101512190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	622	Open in IMG/M
3300006046\|Ga0066652_102044597	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	509	Open in IMG/M
3300006577\|Ga0074050_12068679	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300006578\|Ga0074059_11359228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	542	Open in IMG/M
3300009012\|Ga0066710_101789246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	928	Open in IMG/M
3300009137\|Ga0066709_100983440	All Organisms → cellular organisms → Bacteria	1234	Open in IMG/M
3300009137\|Ga0066709_103018427	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	617	Open in IMG/M
3300009143\|Ga0099792_10604663	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	699	Open in IMG/M
3300010147\|Ga0126319_1229867	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1191	Open in IMG/M
3300010147\|Ga0126319_1526477	All Organisms → cellular organisms → Bacteria	974	Open in IMG/M
3300010333\|Ga0134080_10278815	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	744	Open in IMG/M
3300010335\|Ga0134063_10538045	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	588	Open in IMG/M
3300010399\|Ga0134127_13597559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	508	Open in IMG/M
3300012011\|Ga0120152_1052340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1308	Open in IMG/M
3300012200\|Ga0137382_10029941	All Organisms → cellular organisms → Bacteria	3239	Open in IMG/M
3300012200\|Ga0137382_10092682	All Organisms → cellular organisms → Bacteria	1980	Open in IMG/M
3300012200\|Ga0137382_10564314	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	811	Open in IMG/M
3300012201\|Ga0137365_10005505	All Organisms → cellular organisms → Bacteria	10152	Open in IMG/M
3300012203\|Ga0137399_11723692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	515	Open in IMG/M
3300012204\|Ga0137374_10010385	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	10952	Open in IMG/M
3300012206\|Ga0137380_10284196	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1485	Open in IMG/M
3300012208\|Ga0137376_10041451	All Organisms → cellular organisms → Bacteria	3722	Open in IMG/M
3300012208\|Ga0137376_10064731	All Organisms → cellular organisms → Bacteria	3026	Open in IMG/M
3300012209\|Ga0137379_10515917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1103	Open in IMG/M
3300012209\|Ga0137379_10816957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	837	Open in IMG/M
3300012210\|Ga0137378_11500044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	585	Open in IMG/M
3300012211\|Ga0137377_10018916	All Organisms → cellular organisms → Bacteria	6045	Open in IMG/M
3300012211\|Ga0137377_10421922	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1272	Open in IMG/M
3300012349\|Ga0137387_10701271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	733	Open in IMG/M
3300012349\|Ga0137387_10704170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	731	Open in IMG/M
3300012354\|Ga0137366_10463029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	918	Open in IMG/M
3300012355\|Ga0137369_10007697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	10803	Open in IMG/M
3300012356\|Ga0137371_10602842	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	843	Open in IMG/M
3300012360\|Ga0137375_10037667	All Organisms → cellular organisms → Bacteria	5407	Open in IMG/M
3300012922\|Ga0137394_10171450	All Organisms → cellular organisms → Bacteria	1850	Open in IMG/M
3300012929\|Ga0137404_10774574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	871	Open in IMG/M
3300012929\|Ga0137404_11256865	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	682	Open in IMG/M
3300012930\|Ga0137407_10679048	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300012930\|Ga0137407_11665947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	608	Open in IMG/M
3300012944\|Ga0137410_10083768	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2336	Open in IMG/M
3300012951\|Ga0164300_10104394	All Organisms → cellular organisms → Bacteria	1250	Open in IMG/M
3300012958\|Ga0164299_11174491	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	579	Open in IMG/M
3300012961\|Ga0164302_11487575	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	557	Open in IMG/M
3300012972\|Ga0134077_10465542	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	555	Open in IMG/M
3300012984\|Ga0164309_10997338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	690	Open in IMG/M
3300012987\|Ga0164307_10610404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	842	Open in IMG/M
3300013765\|Ga0120172_1012787	All Organisms → cellular organisms → Bacteria	2638	Open in IMG/M
3300013772\|Ga0120158_10052793	All Organisms → cellular organisms → Bacteria	2790	Open in IMG/M
3300013772\|Ga0120158_10398477	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	633	Open in IMG/M
3300014058\|Ga0120149_1035213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1224	Open in IMG/M
3300014157\|Ga0134078_10316409	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	676	Open in IMG/M
3300015241\|Ga0137418_10974353	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	616	Open in IMG/M
3300017656\|Ga0134112_10206843	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	768	Open in IMG/M
3300018027\|Ga0184605_10006693	All Organisms → cellular organisms → Bacteria	4243	Open in IMG/M
3300018071\|Ga0184618_10018160	All Organisms → cellular organisms → Bacteria	2262	Open in IMG/M
3300018071\|Ga0184618_10315703	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	666	Open in IMG/M
3300018071\|Ga0184618_10361274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	618	Open in IMG/M
3300018076\|Ga0184609_10527943	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	535	Open in IMG/M
3300018433\|Ga0066667_10018495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3631	Open in IMG/M
3300018433\|Ga0066667_10491311	All Organisms → cellular organisms → Bacteria	1009	Open in IMG/M
3300018482\|Ga0066669_10681011	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	905	Open in IMG/M
3300019255\|Ga0184643_1013129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	900	Open in IMG/M
3300019279\|Ga0184642_1594446	All Organisms → cellular organisms → Bacteria	1206	Open in IMG/M
3300019873\|Ga0193700_1002629	All Organisms → cellular organisms → Bacteria	2586	Open in IMG/M
3300019877\|Ga0193722_1072471	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	853	Open in IMG/M
3300019878\|Ga0193715_1028527	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1212	Open in IMG/M
3300019887\|Ga0193729_1000003	All Organisms → cellular organisms → Bacteria	189436	Open in IMG/M
3300020001\|Ga0193731_1057742	All Organisms → cellular organisms → Bacteria	1020	Open in IMG/M
3300020022\|Ga0193733_1179723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	555	Open in IMG/M
3300021080\|Ga0210382_10034820	All Organisms → cellular organisms → Bacteria	1913	Open in IMG/M
3300021080\|Ga0210382_10087914	All Organisms → cellular organisms → Bacteria	1280	Open in IMG/M
3300021080\|Ga0210382_10095050	All Organisms → cellular organisms → Bacteria	1235	Open in IMG/M
3300021080\|Ga0210382_10261954	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	757	Open in IMG/M
3300021344\|Ga0193719_10162223	All Organisms → cellular organisms → Bacteria	962	Open in IMG/M
3300021413\|Ga0193750_1074023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	652	Open in IMG/M
3300021418\|Ga0193695_1013063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1682	Open in IMG/M
3300022756\|Ga0222622_10133596	All Organisms → cellular organisms → Bacteria	1578	Open in IMG/M
3300026310\|Ga0209239_1209702	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	692	Open in IMG/M
3300026528\|Ga0209378_1215569	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	620	Open in IMG/M
3300028536\|Ga0137415_10131706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2344	Open in IMG/M
3300028536\|Ga0137415_10958813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	666	Open in IMG/M
3300028709\|Ga0307279_10074423	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	596	Open in IMG/M
3300028711\|Ga0307293_10105485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	895	Open in IMG/M
3300028713\|Ga0307303_10008303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1796	Open in IMG/M
3300028714\|Ga0307309_10111608	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	662	Open in IMG/M
3300028715\|Ga0307313_10123235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	794	Open in IMG/M
3300028715\|Ga0307313_10134308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	760	Open in IMG/M
3300028715\|Ga0307313_10140250	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	744	Open in IMG/M
3300028718\|Ga0307307_10007882	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2784	Open in IMG/M
3300028721\|Ga0307315_10059573	All Organisms → cellular organisms → Bacteria	1076	Open in IMG/M
3300028722\|Ga0307319_10214974	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	630	Open in IMG/M
3300028755\|Ga0307316_10014501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2473	Open in IMG/M
3300028784\|Ga0307282_10131219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1179	Open in IMG/M
3300028791\|Ga0307290_10038088	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1719	Open in IMG/M
3300028791\|Ga0307290_10178553	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	778	Open in IMG/M
3300028799\|Ga0307284_10066004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1302	Open in IMG/M
3300028799\|Ga0307284_10130409	All Organisms → cellular organisms → Bacteria	959	Open in IMG/M
3300028799\|Ga0307284_10131859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	954	Open in IMG/M
3300028799\|Ga0307284_10164486	All Organisms → cellular organisms → Bacteria	861	Open in IMG/M
3300028802\|Ga0307503_10447254	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	685	Open in IMG/M
3300028803\|Ga0307281_10420820	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	513	Open in IMG/M
3300028819\|Ga0307296_10008080	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5510	Open in IMG/M
3300028819\|Ga0307296_10066635	All Organisms → cellular organisms → Bacteria	1911	Open in IMG/M
3300028824\|Ga0307310_10024157	All Organisms → cellular organisms → Bacteria	2406	Open in IMG/M
3300028824\|Ga0307310_10301642	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	780	Open in IMG/M
3300028824\|Ga0307310_10667540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	532	Open in IMG/M
3300028828\|Ga0307312_10504217	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	799	Open in IMG/M
3300028828\|Ga0307312_10645861	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	700	Open in IMG/M
3300028878\|Ga0307278_10001333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	12310	Open in IMG/M
3300028880\|Ga0307300_10292869	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	549	Open in IMG/M
3300028881\|Ga0307277_10299201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	713	Open in IMG/M
3300028885\|Ga0307304_10015215	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2513	Open in IMG/M
3300031421\|Ga0308194_10120420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	779	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.24%
Host-Associated	Host-Associated	0.76%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.55%
Aquatic	Environmental → Aquatic	10.69%
Plants	Host-Associated → Plants	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.55%
Freshwater	Environmental → Aquatic → Freshwater	6.11%
Sediment	Environmental → Aquatic → Sediment	4.58%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	86.26%
Sediment	Environmental → Aquatic → Freshwater → Sediment	4.58%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.58%
Loam	Environmental → Terrestrial → Soil → Loam	2.29%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.53%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	64.12%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	14.50%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	5.34%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	4.58%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.58%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.29%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.53%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.53%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	35.11%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	22.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.16%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	5.34%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.34%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	4.58%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.82%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.29%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.53%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.53%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.76%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001361	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A30-PF)- 6 month illumina	Environmental	Open in IMG/M
3300001538	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illumina	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006577	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006578	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010147	Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300012011	Permafrost microbial communities from Nunavut, Canada - A30_65cm_6M	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013765	Permafrost microbial communities from Nunavut, Canada - A30_80cm_6M	Environmental	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300014058	Permafrost microbial communities from Nunavut, Canada - A3_65cm_0.25M	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019255	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019873	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s1	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300019878	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020001	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021413	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c1	Environmental	Open in IMG/M
3300021418	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028709	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_118	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028713	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184	Environmental	Open in IMG/M
3300028714	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
A30PFW6_12392242	3300001361	Permafrost	SARARAQTGARNSRAGPKTCGGCQVSRRDRAHGHAQAILEHELQRARKQLAQLPDDRRLAVEEETARVVGALVDAVIEESRREPSLARALASIYGPEPAWEPRVVSWAAD*
A10PFW1_102720981	3300001538	Permafrost	MSRSDRAFHAHAQAVLEHELKRARKQLARLPEERRPAVKEATARAVAAVVDSMIEESRREPSLARALASIYGPEPA
Ga0062593_1023831312	3300004114	Soil	NRPDVLRLYVARASPQACARTRARPKTCCGCQVSRSGRAFHGHAQDVLEHELRRARKQLAQLPEERRPAVEEVTARVVTAVVNSVIEESRREPALARALASIYGAEPAWEPRVVSWAAD*
Ga0063455_1016993972	3300004153	Soil	VNRLDSAFHCHAEAVLEHELVRARNRLAKLSEERRPALEEAIARVVWAVVESVAEESRGEPALARALASIYDPEPAWEPRAVSWASD*
Ga0062589_1021975201	3300004156	Soil	VSRSGRAFHGHARQVLEHELRRARKELARLPEERRPAVEEVTARVVTAVVNSVIEESRREPSLAQALASIYGPKPEREPRVVSWAAD*
Ga0062590_1001463953	3300004157	Soil	VSRSGRAFHGHAQEVLEHELRRARKQLDRLPEERRPAVEEVTARVVTAVVNSVIEESRREPALARALASIYGPKPAREPRVVSWAAD*
Ga0066688_107270992	3300005178	Soil	RTGPATGGGRQMSRRDRALHRHARAILDHELVRARKPLAELPEERRSALVEATAGVVAAVVDSVLEESHREPALARALDSIYAPEPPWEPKVVSLAAD*
Ga0066678_100791153	3300005181	Soil	VSRRARAFHRHAQAVLDHELLRARKRLADLPGERRAALEEETARVVAAVVDSVLEESRREPALARALGSIYGPEPAWEPRVVSWAAD*
Ga0066682_103975841	3300005450	Soil	MSRRDRALHRHARAILDHELVRARKPLAELPEERRSALVEATAGVVAAVVDSVLEESHREPALADALDSIYAPEPPWEPKVVSLAAD*
Ga0070678_1019095222	3300005456	Miscanthus Rhizosphere	AEAILEHELRRAHKSLAGLPEERRSALEEEAARVVAAVVDSMIQEARREPSLARALASIYGTETAWEPRLVSWASD*
Ga0070699_1000201925	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MSRRDRAFHRHAQAVLEHELLRARKRLAALPEGRRLAVEDVTARVVAAVVDSVLEESRREPALARALGSIYGPEPACEPRVVSWATD*
Ga0070704_1005560962	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	VSRSGRAFHGHAQDVLEYELRRARKQLAQLPEERRPAVEELTARVVTAVVNSVIEESRREPALARALASIYGAEPAWEPRVVSWAAD*
Ga0066692_104093611	3300005555	Soil	VSRRARAFHRHAQAVLDHELLRARKRLADLPGERRAALEEETARVVAAVVDSVLEESRREPALARALGSIYGPE
Ga0066700_109638832	3300005559	Soil	MSRRDRALHRHARVILEHELMRARKRLAELPEGRRAALEVASARVVAAVVDSVLEESQREPVLARALDSIYAPEPPSEPKVLSLAAD*
Ga0066706_103536932	3300005598	Soil	VSRRARAFHRHAQAVLDHELLRARKRLADLPGERRAALEEETARVVAAMVDSVLEESRRKPALARALGSIYGPEPAWEPRVVSWAAD*
Ga0066651_105042562	3300006031	Soil	QMSRRDRALHRHARAILDHELVRARKPLAELPEERRSALVEAPACVVAAVVDSALEESHREPALADALDSIYAPEPPWEPKVVSLAAD*
Ga0066656_103922791	3300006034	Soil	VSRRDRAFHRHAQALLEHELLRGRKRLAELPEERRSALEDVTGRVVAAVVDSVLEESRREPALARALGSIYGPEPAWEPRVVSWATD*
Ga0066656_109062461	3300006034	Soil	VSRRDRAQGHAQAILEHELQRARKQLAQLPEGRRSAVEEESARVVAALVDAVIEESRREPSLARALASIYGPEPAWEPRVVSWAAD*
Ga0066652_1015121902	3300006046	Soil	VSRSDRAFHGHAQEVLEHELRRARKQLARVPEERRPTVEEVTARVVAAVVDSVIEESRHEPSLARALASIYGPEPAWEPRVVSWAAD*
Ga0066652_1020445972	3300006046	Soil	MSRRDRALHRHARAILDHELVRARKPLAELPEERRSALVEATACVVAAVVDSVLEESHREPALADALDSIYAPEPPWEPKVVSLAAD*
Ga0074050_120686791	3300006577	Soil	VSRRDRAFHRHAQAVLEHELVRARKRLGELPEARRSALEEASARVVAAVVDSVLEESRREPALARALASIYGPEPAWEPR
Ga0074059_113592282	3300006578	Soil	LEHEFRRAHKSLAALPEERRSALEAEAGRVVAAVVDSMIQEAREEPSLARALASIYGTEAAWEPRLLSWAAD*
Ga0066710_1017892461	3300009012	Grasslands Soil	RDRAFHRHAQALLEHELLRGRKRLAELPEERRSALEDVTGRVVAAVVDSVLEESRREPALARALGSIYGPEPAWEPRVVSWATD
Ga0066709_1009834401	3300009137	Grasslands Soil	EPELRRARKQLAQLPGDRRSAVEEETARVVAALVDAVIEESRREPSLARALASIYGPEPAWEPRVVSWAAD*
Ga0066709_1030184271	3300009137	Grasslands Soil	LHRHARVILEHELMRARKRLAELPEGRRAALEVASARVVAAVVDSVLEESQREPVLARALDSIYAPEPPSEPKVLSLAAD*
Ga0099792_106046632	3300009143	Vadose Zone Soil	VNRRGRAFHRHAQAVLDHELLRARKRLADLPEERRVALEEETARVVAAVVDSVLEESRREPALARALGSIYGPEPAWEPRVVSWAAD*
Ga0126319_12298672	3300010147	Soil	VSLSDRAFHGHAQVVLDHELRRARKQLARLPEERRPAVEDVTARVVAAVVDSVIEESRHEPSLARALASIYGPEPAWEPRVLSWAAD*
Ga0126319_15264772	3300010147	Soil	VRRSDRAFHGHAQAVLDHELRRARKQLARLPEERRPAVEDVTARVVAAVVDSVIEESRHEPSLARALASIYGSETAWEPRAVSWAAD*
Ga0134080_102788152	3300010333	Grasslands Soil	PKTCGGCEVSRRDRAQGHAQAILEHELQRARKQLAQLPEGRRSAVEEESARVVAALVDAVIEESRREPSLARALASIYGPEPAWEPRVVSWAAD*
Ga0134063_105380451	3300010335	Grasslands Soil	HSCAQTCAHSRTGPATGGGRQMSRHDRALHRHARAILDHELVRARKPLAELPEERRSALVEATAGVVAAVVDSVLEESHREPALARALDSIYAPEPPWEPKVVSLAAD*
Ga0134127_135975591	3300010399	Terrestrial Soil	VSRSGRAFHGHARQVLEHELRRARKQLARLPEERRPAVEEVSARVVTAVVNSVIEESRREPSLAQALASIYGPSPAREPRVVSWAAD*
Ga0120152_10523401	3300012011	Permafrost	MSRRDRAHSHAQTILEHELQRGRKQLAQLPEDRRSAVEEETARIVAALVDAVIEESRREPSLAQALASIYGPEPAWEPRVVSWASD*
Ga0137382_100299413	3300012200	Vadose Zone Soil	VSRRGRAFHRHAQAVLDHELLRARKRLADLPEERRVALEEETARVVAAVVDSVLEESRREPALARALGSIYGPEPAWEPRVVSWAAD*
Ga0137382_100926823	3300012200	Vadose Zone Soil	VSRRDRAFHRHAQAVLEHELLLRARKRLAALPEERRSALEDVTAQVVAAVVDSVLEESRREPALARALGSIYGPEPAWEPRVVSWATD*
Ga0137382_105643141	3300012200	Vadose Zone Soil	VLDQELLRAGKRLADLPDAGRSAVEETTARVVAAVVDSVLDESRREPALAGALASIYGPEPAWAPNVFSWAAD*
Ga0137365_100055053	3300012201	Vadose Zone Soil	VSRRDRAFHRHARAVLEHELYRARKRLAELPEERRSALEDVSARVVAAVVDSVLEESRREPALARALGSIYGPEPAWEPRVVSWATD*
Ga0137399_117236922	3300012203	Vadose Zone Soil	VSRSDRAFHGHAQAILEDELRRARKRVAQLPEERRSVFEEESARIVAALVDAVIEESRREPTLAGALASIYGPEPAWELRVVSWAAD*
Ga0137374_100103853	3300012204	Vadose Zone Soil	VSRRDRAFHGHAQEVLEHELRRARKQLARLPEERRPALEEVTARVVAAVVDSVIEESRHEPSLARALASIYGPEPAWEPRVVSWVAD*
Ga0137380_102841962	3300012206	Vadose Zone Soil	VSRRDRAQGHGQAILEHELQRARKQLAQLPEGRRSAVEEESARVVAALVDAVIEESRREPSLARALASIYGPEPAWEPRVVSWAAD*
Ga0137376_100414512	3300012208	Vadose Zone Soil	VSRRDRAFHRHAQAVLEHELLRARKRLAALPEERRSALEDVTAQVVAAVVDSVLEESRREPALARALGSIYGPEPAWEPRVVSWATD*
Ga0137376_100647313	3300012208	Vadose Zone Soil	VSRRDRAHGHAQAILEHELQRARKQLAQLPDDRRLAVEEETARIVAALVNAVIEESRREPSLAWALASIYGPEPAWEPRVVSWAAD*
Ga0137379_105159171	3300012209	Vadose Zone Soil	VTRRDRAFHRHAQVVLEHELLRARKRLADLPEERRSALEEAAAGVVAAVVDSVLEESRREPALARALGSIYGQELEWEPRVVSWASD*
Ga0137379_108169571	3300012209	Vadose Zone Soil	VSRRDRAQGHGQAILEHELQRARKQLAQLPEGRRSAVEEESARVVAALVDAVIEESRREPSLARALASIYGPEPAWEPR
Ga0137378_115000442	3300012210	Vadose Zone Soil	VSRRDCAHGHAQAILEHELQRARKQLAQLPDDRRLAVEEETARIVAALVNAVIEESRREPSLARALVSIYGPE
Ga0137377_100189162	3300012211	Vadose Zone Soil	VSRRARAFHRHAQAVLDHELLRARKRLADLPGERRAALEEETARVVAAVVDSVLEESCREPALARALGSIYGPEPAWEPRVVSWAAD*
Ga0137377_104219222	3300012211	Vadose Zone Soil	VSRRDRAHGHALAILEHELQRARKQLAQLPEGRRSAVEEESARVVAALVDAVIEESRREPSLARALASIYGPEPAWEPWVVSWAAD*
Ga0137387_107012711	3300012349	Vadose Zone Soil	TCGGCQVSRRDRAQGHAQAILEHELQRARKQLAQLPEGRRSAVEEESARVVAALVDAVIEESRREPSLARALASIYGPEPAWEPRVVSWAAD*
Ga0137387_107041701	3300012349	Vadose Zone Soil	GGRPVSRRARAFHRHAQAVLDHELLRARKRLADLPGERRAALEEETARVVAAVVDSVLEESRREPALARALGSIYGPEPAWEPRVVSWAAD*
Ga0137366_104630292	3300012354	Vadose Zone Soil	VSRRDRAFHRHARAVLEHELYRARKRLAELPEERRSALEDVSARVVAAVVDSVLEESRREPALARALGSIYGPEPAWEPRVVSWA
Ga0137369_1000769713	3300012355	Vadose Zone Soil	VSRSDRAFHGHAQEVLEHELRRARKQLARLPEERRPALEEVTARVVAAVVDSVIEESRHEPSLARALASIYGPEPAWEPRVVSWVAD*
Ga0137371_106028421	3300012356	Vadose Zone Soil	VSRRDRAFHRHAQTVLEHELLRARKRLAELPEERRSALEDVTAGVVAAVVDAVLEESRREPALARALGSIYDPEPGWEPRVVSWAAD*
Ga0137375_100376671	3300012360	Vadose Zone Soil	QEVLEHELRRARKQLARLPEERRPALEEVTARVVAAVVDSVIEESRHEPSLARALASIYGPEPAWEPRVVSWVAD*
Ga0137394_101714502	3300012922	Vadose Zone Soil	VSRSDRAFHGHAQEVLEHELRRARKQLARLPEERRPALEEATGRVVAAVVDSVIEESRQEPSLARALASIYGSEPAWEPRVVSWAAD*
Ga0137404_107745742	3300012929	Vadose Zone Soil	VSRRDRAFHRHAQAVLEHELLRARKRLAELPEERRSALEDVTAGVVAAVVDAVLEQSRREPPLARALGSIYDPEPGWEPRVVSWAAD*
Ga0137404_112568652	3300012929	Vadose Zone Soil	VSRRDRAFHRHAQVVLEHELLRARKRLAELPDERCSALEDVTARVVAAVVDSVLEESRREPALARALGSIYGPEPAWEPRVVSWATD*
Ga0137407_106790482	3300012930	Vadose Zone Soil	VSRRDRAFHRHAQAVLEHELLRARKRLAAVPQERRLALEDVTARVVAAVVDSVLEESRREPALARALGSIYGPEPAWEPRVVSWATD*
Ga0137407_116659471	3300012930	Vadose Zone Soil	APSGGGHQVSRRARAFHRHGQAILEHELLRARRRLAELPEERRMALEEATARIVMAMVDSVLEESRREPALARALGSIYGPEAGWEPRVVFWAAD*
Ga0137410_100837683	3300012944	Vadose Zone Soil	VSRRGRAFHRHAQAVLDHELLRARKRLADLPEERRVALEKETARVVAAVVDSVLEESRREPALARALGSIYGPEPAWEPRVVSWAAD*
Ga0164300_101043941	3300012951	Soil	RLYVARAGPQACARTRTRPKTCCGCQVSRSGRAFHGHAQDVLEHELRRARTQLAQLPEERRPAVEEVTAQVVTAVVNSVIEESRREPALARALASIYGAEPGWEPRVVAWAAD*
Ga0164299_111744911	3300012958	Soil	VSRSGRAFHGHAQEVLEYELRRARKQLARLPEERRPAVEEVTARVVTAVVNSVIEESRREPSLAQALASIYGPKPAREPRVVSWVAD*
Ga0164302_114875751	3300012961	Soil	HAQDVLEHELRRARKQLAQLPEERRPAVEEVTARVVTAVVNSVIEESRREPALARALASIYGAEPGWEPRVVSWAAD*
Ga0134077_104655421	3300012972	Grasslands Soil	VSRRDRAFHRHAQAVLEHELLRGRKRLAGLPEGRRSALEEAMARVVAAMVDSVLEESRREPALARALGSIYAPEPPWEPRVPSWAAD*
Ga0164309_109973381	3300012984	Soil	VSRSGRAFHGHAQDVLEHELRRARKQLAQLPEERRSAVEELTARVVTAVVNSEIEDSRAEPALARALASIYGAEPGWEPRVV
Ga0164307_106104041	3300012987	Soil	HELRRARKQLAQLPEERRPAVEELTARVVTAVVNSVIEESRREPALARALASIYGAEPGWEPRVVSWAAD*
Ga0120172_10127872	3300013765	Permafrost	VSRRDRAHGHAQAILEHELQRARKQLAQLPDDRRLAVEEETARVVGALVDAVIEESRREPSLAQALASIYGPEPAWEPRVVSWAAD*
Ga0120158_100527933	3300013772	Permafrost	MSRSDRAFHAHAQAVLEHELRRARKQLARLPEERRPAVEEVTARAVAAVVDSMIEESWREPSLARALASIYGPEPAWEPRVVSWAAD*
Ga0120158_103984771	3300013772	Permafrost	MSRRDRAHGHAQAILEHELQRARKQLAQLADHRRAAVEEETARIVAALVDAVIEESRRAPSLARALVSIYGPEPGWEPRVV
Ga0120149_10352132	3300014058	Permafrost	VSRRDRAHGHAQAILEHELQRGRKQLAQLPEDRRSAVEEETARIVAALVDAVIEESRREPSLAQALASIYGPEPAWEPRVVSWAAD*
Ga0134078_103164091	3300014157	Grasslands Soil	QACAGFRARSATGGGRQVSRRDRAFHRHAQAVLEHEPLRGRKRLAGLPEGRRSALEEAMARVVAAMVDSVLEESRREPALARALGSIYAPEPPWEPRVPSWAAD*
Ga0137418_109743532	3300015241	Vadose Zone Soil	VSRRGRAFHRHAQAVLDHELLRARKRLAGLPEERRVALEEETARVVAAVVDSVLEESRREPALARALGSIYGPEPAWEPRVVSWAAD*
Ga0134112_102068432	3300017656	Grasslands Soil	VSRRDRAQGHAQAILEHELRRARKQLAQLPGDRRSAVEEETARVVAALVDAVIEESRREPSLARALASIYGPEPAWEPRVVSWAAD
Ga0184605_100066933	3300018027	Groundwater Sediment	VSRSDRAFHGHAQEVLEHELRRARKQLARLPEERRPALEEVTARVVAAVVDSMIEESRYEPSLARALASIYGPEPAWEPRVVSWAAD
Ga0184618_100181602	3300018071	Groundwater Sediment	VSRRDRAFHAHAQAVLEHELLRARKRLAALPEDRRSALDDVTARVVAAVVDSVLDESRREPALARALGSIYGPEPAWEPRVVSWATD
Ga0184618_103157031	3300018071	Groundwater Sediment	MSRRDRAHGHAQAILEHELQRARKQLAQLPDDRRLAVEEETSRIVAALVNAVIEESRREPSLARALASIYGPEPAWEPRVV
Ga0184618_103612741	3300018071	Groundwater Sediment	VSRSDRAFHGHAQEVLEHELRRARKQLARLPEERRPALEEVTARVVAAVVDSMIEESRYEPSLARALASIYGPEPAWEPRV
Ga0184609_105279432	3300018076	Groundwater Sediment	SEANARSCGAGPATGGGRQVSRRDRAFHRHAQAVLEHELLRARKRLAGLPETRRSALEEASARVVAAVVDSVLEESRREPALARALASIYGPEPAWEPGVVSWAAD
Ga0066667_100184952	3300018433	Grasslands Soil	VSRRARAFHRHAQAVLDHELLRARKRLADLPGERRAALEEETARVVAAVVDSVLEESRREPALARALGSIYGPEPAWEPRVVSWAAD
Ga0066667_104913112	3300018433	Grasslands Soil	VSRRDRAFHRHAQAVLEHELLRPRRRLAELPEERRSALEDVTARVVAAVVDSVLEESRREPALARALGSIYGPEPAWEPRVFSWATD
Ga0066669_106810112	3300018482	Grasslands Soil	VSRRARAFHRHAQAVLDHELLRAQKRLAELPGERRVALEEETARVVAAVVDSVLEESRREPALARALGSIYGPEPAWEPRVVSWAAD
Ga0184643_10131291	3300019255	Groundwater Sediment	RTRPKTCCGCQVSRSDRAFHGYAQEVLEHELWRARKRLAQLPEGRRPALEEVTARVVAAVVDSVIEESRHEPSLARALASIYGPEPAWEPRVVSWAAD
Ga0184642_15944462	3300019279	Groundwater Sediment	VSRSDRSFHGHAQEVLEHELRRARKQLARLPEERRPALEEVTARVVAAVVDSMIEESRYEPSLARALASIYGPEPAWEPRVVSWAAD
Ga0193700_10026292	3300019873	Soil	LPVSRSDRAFHAHAQEVLEHELRRARKQLARLPEERRPAVEEVTAVVVTAVVNSVIEESRREPALARALASIYGQEPAWEPRVVSWAAD
Ga0193722_10724712	3300019877	Soil	VNPNRSQGLLWLPVSRSDRAFHGHAQEVLEHELRRARKQLARLPEERRPAVEEVTARVVTALVDSVIEESRREPALARALASIYGQEPAWEPRVVSWAAD
Ga0193715_10285272	3300019878	Soil	VSRRDRAFHRHAQAVLEHELLRARNRLAALPENRRSALDDVTARVVAAVVDSVLEESRREPALARALESIYGPEPAWEPGVVSWATD
Ga0193729_1000003197	3300019887	Soil	VSLRDRAFHRHAEAVLEHELLRARRQLAELSEERRSAVEEVAADIVAATVDSMLEESRREPALARALDSIYGPEPAWEPRALSWASD
Ga0193731_10577422	3300020001	Soil	VSRRDRAFHRHAQAVLEHELLRARNRLAALPENRRSALDDVTARVVAAVVDSVLEESRREPALARALGSIYGPEPAWEPGVVSWATD
Ga0193733_11797232	3300020022	Soil	VNPNPSQGLLWLPVSRSDRAFHGHAQEVLEHELRRARKQLARLPEERRPAVEEVTAWVVTALVDSVIEESRREPALARALASIYGQEPAWEPRVVSWAAD
Ga0210382_100348202	3300021080	Groundwater Sediment	VSRRDRAFHRHAQGVLEHELRRARKRLAELPEERRSALEDVTARVVAAVVDSVLEESRREPALDRALGSIYGPEPAWEPRVVSWATD
Ga0210382_100879142	3300021080	Groundwater Sediment	VSRRDRAFHRHAQAVLEHELLRARKRLAALPQERRSALEDVTAQVVAAVVESVLEESRREPALARALGSIYGPEAAWEPRVVSWATD
Ga0210382_100950501	3300021080	Groundwater Sediment	EVLEHELWRARKRLAQLPEGRRPALEEVTARVVAAVVDSVIEESRHEPSLARALASIYGLEPAWEPRVVSWAAD
Ga0210382_102619542	3300021080	Groundwater Sediment	VSRSDRAFHGHAQEVLEHELRRARKQLARLPEERRPALEEVTTRVVAAVVDSVIEESRHEPSLARALASIYGAPEPAWEPRVVSWAAD
Ga0193719_101622232	3300021344	Soil	VSRSDRAFHGHAQEVLEHELRRAGKQLARLPEERRPALEEVTARVVAAMVDAVIEESRHEPSLARALASIYGPEPAWEPRVVSWAAD
Ga0193750_10740232	3300021413	Soil	FHRHAEAVLEHELLRARRQLAELSEERRSAVEEVAADIVAATVDSVLEESRREPALARALDSIYGPEPAWEPRALSWASD
Ga0193695_10130632	3300021418	Soil	VSRRDRAFHRHAQAVLEHELLRARKRLAAVPQERRSSLEDVTARVVAAVVDSVLEESRREPALARALGSIYGPEPAWEPGVVSWATD
Ga0222622_101335963	3300022756	Groundwater Sediment	VSRRDRAFHRHAQAVLEHELLRARKRLAGLPETRRSALEEASARVVAAVVDSVLEESRREPALARALASIYGPEPAWEPGVVSWAAD
Ga0209239_12097022	3300026310	Grasslands Soil	GGGRPVSRRARAFHRHAQAVLDHELLRARKRLADLPGERRAALEEETARVVAAVVDSVLEESRREPALARALGSIYGPEPAWEPRVVSWAAD
Ga0209378_12155691	3300026528	Soil	RTRPQACARNRGAPATGGGRPVSRRARAFHRHAQAVLDHELLRARKRLADLPGERRAALEEETARVVAAVVDSVLEESRREPALARALGSIYGPEPAWEPRVVSWAAD
Ga0137415_101317062	3300028536	Vadose Zone Soil	VSRRGRAFHRHAQAVLDHELLHARKRLADLPEERRVALEEETARVVAAVVDSVLEESRREPALARALGSIYGPEPAWEPRVVSWAAD
Ga0137415_109588132	3300028536	Vadose Zone Soil	VSRSDRAFHGHAQAILEDELRRARKRVAQLPEERRSVFEEESARIVAALVDAVIEESRREPTLAGALASIYGPEPAWELRVVSWAAD
Ga0307279_100744232	3300028709	Soil	PPGGCANPNLSQGLLWLPVSRSDRAFHAHAQEVLEHELRRARKQLARLPEERRPAVEEVTAVVVTAVVNSVIEESRREPALARALASIYGQEPAWEPRVVSWAAD
Ga0307293_101054851	3300028711	Soil	VNPNPSQGLLWLPVSRSDRAFHGHAQEVLEHELRRARKQLARLPEERRPAVEEVTAVVVTAVVNSVIEESRREPALAQALASIYGQEPAWEPRVVSWAAD
Ga0307303_100083032	3300028713	Soil	VSRSDRAFHAHAQEVLEHELRRARKQLARLPEERRPAVEEVTAVVVTAVVNSVIEESRREPALARALASIYGQEPAWEPRVVSWAAD
Ga0307309_101116082	3300028714	Soil	SRSDRAFHRHAQEVLEHELRRARKQLARLPEERRPAVEEVTAVVVTAVVNSVIEESRREPALARALASIYGQEPAWEPRVVSWAAD
Ga0307313_101232351	3300028715	Soil	RTGPQARAGIRALPKTCCGCQVSRSDRAFHGHAQEVLEHELRRARKQLARLPEERRPALEEVTTRVVAAVVDSVIEESRHEPSLARALASIYGAPEPAWEPRVVSWAAD
Ga0307313_101343081	3300028715	Soil	SDRAFHRHAQEVLEHELRRARKQLARLPEERRPAVEEVTAWVVTALVDSVIEESRREPALARALASIYGQEPAWEPRVVSWAAD
Ga0307313_101402501	3300028715	Soil	RAFHAHAQAVLEHELLRARKRLAALPEDRRSALDDATARVVAAVVDSVLEESRREPALARALGSIYGPEPAWEPRVVSWATD
Ga0307307_100078823	3300028718	Soil	VSRRDRAFHRHAQAVLEHELLRARNRLAALPENRRSALDDVTARVVAAVVDSVLEESRREPALDRALGSIYGPEPAWEPGVVSWATD
Ga0307315_100595732	3300028721	Soil	VCANPNPSQGLLWLPVSRSDRAFHRHAQEVLEHELRRARKQLARLPEERRPAVEEVTAVVVTAVVNSVIEESRREPALARALASIYGQEPAWEPRVVSWAAD
Ga0307319_102149742	3300028722	Soil	VVAQEVLEHELRRARNQLARLPEERRPAVEEVTARVVTAVVNSVIEESRREPSLAQALASIYGPKPAREPRVVSWAAD
Ga0307316_100145012	3300028755	Soil	VNPNPSQGLLWLPVSRSDRAFHRHAQEVLEHELRRARKQLARLPEERRPAVEEVTAWVVTALVDSVIEESRREPALARALASIYGQEPAWEPRVVSWAAD
Ga0307282_101312192	3300028784	Soil	MSRRDRAHGHAQAILEHELQRARKQLAQLPDDRRLAVEEETARIVAALVNAVIEESRREPSLAQALASIYGPEPAWEPRVVSWAAD
Ga0307290_100380882	3300028791	Soil	VSRSDRAFHGHAQEVLEHELRRARKQLARLPEERRPAVEEVTAWVVTALVDSVIEESRREPALARALASIYGQEPAWEPRVVSWAAD
Ga0307290_101785531	3300028791	Soil	NARSCGAGPATGGGRQVSRRDRAFHRHAQAVLEHELLRARNRLAALPENRRSALDDVTARVVAAVVDSVLEESRREPALARALESIYGPEPAWEPGVVSWATD
Ga0307284_100660043	3300028799	Soil	VSRRDRAFHAHAQAVLEHELLRARKRLAALPEDRRSALDDATARVVAAVVDSVLEESRREPALARALGSIYGPEPAWEPGVVSWATD
Ga0307284_101304092	3300028799	Soil	VSRRDRAHGHAQAILEHELQRARKQLAQLPDDRRLAVEEETARIVAALVNAVIEESRREPSLARALASIYGPEPAWEPRVVSWAAD
Ga0307284_101318592	3300028799	Soil	VNPNPSQGLLWLPVSRSDRAFHGHAQEVLEHELRRARKQLARLPEERRPAVEEVTAWVVSALVDSVIEESRREPALARALASIYGHEPAWEPRVVSWAAD
Ga0307284_101644862	3300028799	Soil	VTRSQRALHDHARVILEHELRRARKGLARLPEERRSALEEEAARVIAAVVDSMVEEARREPSLAQALASIYGVEPGWEPRLVSLAAD
Ga0307503_104472542	3300028802	Soil	VSRRDRAFHGHAQVVLDHELRRAGKQLARLPEERRQAVEDVTARVVAAVVDSVMEESRHEPSLARALASIYGPEPAWEPRALSWAAD
Ga0307281_104208201	3300028803	Soil	RSRTGPKARGGCQVTRSHREVHDHAQEILEHELRRARKTLAKLPEQRRSALEEEAARVVTAVVDSMIEEARREPSVARALASIYGTEPAWEPRLVSWAAD
Ga0307296_100080802	3300028819	Soil	VSRRDRAFHAHAQAVLEHELLRARNRLAALPENRRSALDDVTARVVAAVVDSVLEESRREPALARALESIYGPEPAWEPGVVSWATD
Ga0307296_100666352	3300028819	Soil	LHDHAEAILEHELRRARKRLTQLPEERRSALEEETARVVAAVVEAVIEESRREPSLARALASIYGPEPAWEPRVVSWAAD
Ga0307310_100241571	3300028824	Soil	LLWLPVSRSDRAFHGHAQEVLEHELRRARKQLARLPEERRPAVEEVTARVVTALVDSVIEESHREPALARALASIYGQEPAWEPRVVSWAAD
Ga0307310_103016422	3300028824	Soil	VIRSQRALHDHARVILEHELRRARKGLARLPEERRSALEEEAARVIAAVVDSMVEEARREPSLAQALASIYGVEPGWEPRLVSLAAD
Ga0307310_106675402	3300028824	Soil	VTRGDRALHDHAEAILGHELRRAHKSLAGLPEERRSALEAEAARVVAAVVDSMIEEARREPSLARALATIYGTEPAWEPRLVSWAAD
Ga0307312_105042171	3300028828	Soil	DHAEAILEHELRRARKRLAQLPEERRSALEEETARVVAAVVEAVIEESRREPSLARALASIYGPEPAWEPRVVSWAAD
Ga0307312_106458612	3300028828	Soil	GGRRQVSRRDRAFHRHAQAVLEHELLRARKRLAALPEERRSALEDVAAQVVAAVVDSVLEESRREPALARALGSIYGPEPAWEPRVVSWATD
Ga0307278_1000133310	3300028878	Soil	VSRRDRAFHRHAQAVLEHELLRARKRLAALPEERRSALEDVTAQVVAAVVDSVLEESRREPALARALGSIYGPEPAWEPRVVSWATD
Ga0307300_102928691	3300028880	Soil	WLPVSRSDRAFHGHAQEVLEHELRRARKQLARLPEERRPAVEEVTARVVTALVDSVIEESHREPALARALASIYGQEPAWEPRVVSWAAD
Ga0307277_102992012	3300028881	Soil	VSRRDRAFHAHAQAVLEHELLRARKRLAALPEDRRSALDDVTARVVAAVVDSVLEESRREPALARALGSIYGPEPTWEPGVVSWATD
Ga0307304_100152152	3300028885	Soil	VSRRDRAFHRHAQAVLEHELLRARNRLAALPENRRSALDDVTARVVAAVVDSVLEESRREPALARALESIYGPE
Ga0308194_101204201	3300031421	Soil	VSRRDRAFHAHAQAVLEHELLRARKRLAALPEDRRSALDDVTARVVAAVVDSMLEESRREPALARALGSIYGPEPV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F062284

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences