Metagenome / Metatranscriptome Family F062200

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F062200
Family Type	Metagenome / Metatranscriptome
Number of Sequences	131
Average Sequence Length	92 residues
Representative Sequence	MWRLMAVFVAFAALVGLTMVHGTVSAQPPGRPAADKQLICHVSDDHSAHIIEVAEPAVPAHLRNHGDCLINSTDRTLIGEPCDPTDANDNDICDVQP
Number of Associated Samples	92
Number of Associated Scaffolds	130

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	82.44 %
% of genes near scaffold ends (potentially truncated)	31.30 %
% of genes from short scaffolds (< 2000 bps)	78.63 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.63

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (54.962 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (21.374 % of family members)
Environment Ontology (ENVO)	Unclassified (32.824 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (67.939 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 26.40% β-sheet: 16.80% Coil/Unstructured: 56.80%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.63
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.63
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 130 Family Scaffolds
PF13462	Thioredoxin_4	20.00
PF01323	DSBA	10.77
PF02781	G6PD_C	5.38
PF00480	ROK	3.85
PF06197	DUF998	3.85
PF00011	HSP20	3.08
PF02190	LON_substr_bdg	2.31
PF02739	5_3_exonuc_N	0.77
PF07690	MFS_1	0.77
PF02133	Transp_cyt_pur	0.77
PF08534	Redoxin	0.77
PF13428	TPR_14	0.77
PF00393	6PGD	0.77
PF04264	YceI	0.77
PF00486	Trans_reg_C	0.77
PF00903	Glyoxalase	0.77
PF11028	DUF2723	0.77
PF00232	Glyco_hydro_1	0.77
PF13687	DUF4153	0.77
PF00456	Transketolase_N	0.77

COG ID	Name	Functional Category	% Frequency in 130 Family Scaffolds
COG1940	Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain	Transcription [K]	7.69
COG0364	Glucose-6-phosphate 1-dehydrogenase	Carbohydrate transport and metabolism [G]	5.38
COG3371	Uncharacterized membrane protein	Function unknown [S]	3.85
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	3.08
COG0021	Transketolase	Carbohydrate transport and metabolism [G]	0.77
COG0258	5'-3' exonuclease Xni/ExoIX (flap endonuclease)	Replication, recombination and repair [L]	0.77
COG0362	6-phosphogluconate dehydrogenase	Carbohydrate transport and metabolism [G]	0.77
COG1023	6-phosphogluconate dehydrogenase (decarboxylating)	Carbohydrate transport and metabolism [G]	0.77
COG2353	Polyisoprenoid-binding periplasmic protein YceI	General function prediction only [R]	0.77
COG2723	Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase	Carbohydrate transport and metabolism [G]	0.77
COG3959	Transketolase, N-terminal subunit	Carbohydrate transport and metabolism [G]	0.77

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	54.96 %
Unclassified	root	N/A	45.04 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	54.96 %
Unclassified	root	N/A	45.04 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	54.96 %
Unclassified	root	N/A	45.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.04 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	13.74 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	13.74 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.04 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	13.74 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5.34 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.04 %
Candidatus Eisenbacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria	12.98 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3.82 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	1.53 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.04 %
Candidatus Eisenbacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	8.40 %
Geminicoccaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Geminicoccaceae	3.82 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	1.53 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.04 %
Candidatus Eisenbacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	8.40 %
unclassified Geminicoccaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Geminicoccaceae → unclassified Geminicoccaceae	3.82 %
Brevundimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Brevundimonas	1.53 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.04 %
Candidatus Eisenbacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	8.40 %
Geminicoccaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Geminicoccaceae → unclassified Geminicoccaceae → Geminicoccaceae bacterium	3.82 %
unclassified Brevundimonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Brevundimonas → unclassified Brevundimonas	1.53 %
Mycolicibacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.04 %
Candidatus Eisenbacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	8.40 %
Geminicoccaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Geminicoccaceae → unclassified Geminicoccaceae → Geminicoccaceae bacterium	3.82 %
Brevundimonas sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Brevundimonas → unclassified Brevundimonas → Brevundimonas sp.	1.53 %
Mycolicibacterium sarraceniae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium sarraceniae	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004463\|Ga0063356_105566354	Not Available	540	Open in IMG/M
3300004479\|Ga0062595_102547118	Not Available	511	Open in IMG/M
3300005166\|Ga0066674_10402629	Not Available	634	Open in IMG/M
3300005330\|Ga0070690_100086079	All Organisms → cellular organisms → Bacteria	2063	Open in IMG/M
3300005330\|Ga0070690_101756419	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300005332\|Ga0066388_100720262	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	1602	Open in IMG/M
3300005332\|Ga0066388_104608429	Not Available	702	Open in IMG/M
3300005332\|Ga0066388_108710918	Not Available	504	Open in IMG/M
3300005340\|Ga0070689_100000026	All Organisms → cellular organisms → Bacteria	100274	Open in IMG/M
3300005343\|Ga0070687_100051093	All Organisms → cellular organisms → Bacteria	2138	Open in IMG/M
3300005345\|Ga0070692_10761581	Not Available	657	Open in IMG/M
3300005365\|Ga0070688_100437699	Not Available	975	Open in IMG/M
3300005440\|Ga0070705_100342341	All Organisms → cellular organisms → Bacteria	1087	Open in IMG/M
3300005444\|Ga0070694_100049094	All Organisms → cellular organisms → Bacteria → Proteobacteria	2841	Open in IMG/M
3300005444\|Ga0070694_100341596	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	1157	Open in IMG/M
3300005444\|Ga0070694_101518009	Not Available	567	Open in IMG/M
3300005468\|Ga0070707_100105901	All Organisms → cellular organisms → Bacteria	2727	Open in IMG/M
3300005468\|Ga0070707_100509754	All Organisms → cellular organisms → Bacteria	1165	Open in IMG/M
3300005526\|Ga0073909_10000316	All Organisms → cellular organisms → Bacteria	16674	Open in IMG/M
3300005526\|Ga0073909_10013696	All Organisms → cellular organisms → Bacteria	2519	Open in IMG/M
3300005544\|Ga0070686_100121849	All Organisms → cellular organisms → Bacteria	1792	Open in IMG/M
3300005544\|Ga0070686_100406298	All Organisms → cellular organisms → Bacteria	1037	Open in IMG/M
3300005545\|Ga0070695_100632440	Not Available	843	Open in IMG/M
3300005549\|Ga0070704_100112150	All Organisms → cellular organisms → Bacteria	2077	Open in IMG/M
3300005549\|Ga0070704_100117945	All Organisms → cellular organisms → Bacteria	2032	Open in IMG/M
3300005549\|Ga0070704_100306339	All Organisms → cellular organisms → Bacteria	1325	Open in IMG/M
3300005549\|Ga0070704_100343783	All Organisms → cellular organisms → Bacteria	1257	Open in IMG/M
3300005617\|Ga0068859_100981673	All Organisms → cellular organisms → Bacteria	927	Open in IMG/M
3300005713\|Ga0066905_100044864	All Organisms → cellular organisms → Bacteria	2656	Open in IMG/M
3300005713\|Ga0066905_101581920	Not Available	599	Open in IMG/M
3300005719\|Ga0068861_100045946	All Organisms → cellular organisms → Bacteria	3291	Open in IMG/M
3300005719\|Ga0068861_100587302	Not Available	1020	Open in IMG/M
3300005764\|Ga0066903_102458032	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	1008	Open in IMG/M
3300005841\|Ga0068863_100510090	All Organisms → cellular organisms → Bacteria	1185	Open in IMG/M
3300005841\|Ga0068863_101019558	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	831	Open in IMG/M
3300005842\|Ga0068858_101033241	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	806	Open in IMG/M
3300005843\|Ga0068860_100229919	All Organisms → cellular organisms → Bacteria	1802	Open in IMG/M
3300006046\|Ga0066652_100202686	All Organisms → cellular organisms → Bacteria → Proteobacteria	1708	Open in IMG/M
3300006046\|Ga0066652_100374126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Brevundimonas → unclassified Brevundimonas → Brevundimonas sp.	1290	Open in IMG/M
3300006163\|Ga0070715_10890634	Not Available	547	Open in IMG/M
3300006844\|Ga0075428_100026380	All Organisms → cellular organisms → Bacteria	6432	Open in IMG/M
3300006846\|Ga0075430_100812676	Not Available	770	Open in IMG/M
3300006847\|Ga0075431_100944647	Not Available	831	Open in IMG/M
3300006847\|Ga0075431_102121436	Not Available	517	Open in IMG/M
3300006852\|Ga0075433_10005296	All Organisms → cellular organisms → Bacteria	10119	Open in IMG/M
3300006852\|Ga0075433_11068266	Not Available	702	Open in IMG/M
3300006852\|Ga0075433_11288376	Not Available	633	Open in IMG/M
3300006854\|Ga0075425_100225056	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria	2158	Open in IMG/M
3300006880\|Ga0075429_100032870	All Organisms → cellular organisms → Bacteria	4508	Open in IMG/M
3300006904\|Ga0075424_100840966	Not Available	979	Open in IMG/M
3300006914\|Ga0075436_100301072	All Organisms → cellular organisms → Bacteria	1149	Open in IMG/M
3300006914\|Ga0075436_100958135	Not Available	641	Open in IMG/M
3300006954\|Ga0079219_11075654	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Geminicoccaceae → unclassified Geminicoccaceae → Geminicoccaceae bacterium	678	Open in IMG/M
3300007076\|Ga0075435_101705113	Not Available	553	Open in IMG/M
3300009012\|Ga0066710_101179044	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	1186	Open in IMG/M
3300009012\|Ga0066710_103984456	Not Available	553	Open in IMG/M
3300009094\|Ga0111539_10257457	All Organisms → cellular organisms → Bacteria → Proteobacteria	2032	Open in IMG/M
3300009094\|Ga0111539_11422251	Not Available	804	Open in IMG/M
3300009100\|Ga0075418_10340860	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	1600	Open in IMG/M
3300009100\|Ga0075418_10847248	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	988	Open in IMG/M
3300009147\|Ga0114129_12433141	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Geminicoccaceae → unclassified Geminicoccaceae → Geminicoccaceae bacterium	627	Open in IMG/M
3300009156\|Ga0111538_10499094	All Organisms → cellular organisms → Bacteria	1543	Open in IMG/M
3300009156\|Ga0111538_10597029	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Brevundimonas → unclassified Brevundimonas → Brevundimonas sp.	1400	Open in IMG/M
3300009156\|Ga0111538_12204424	Not Available	692	Open in IMG/M
3300009162\|Ga0075423_10038938	All Organisms → cellular organisms → Bacteria	4854	Open in IMG/M
3300009162\|Ga0075423_10469485	Not Available	1323	Open in IMG/M
3300009162\|Ga0075423_10851746	Not Available	965	Open in IMG/M
3300009162\|Ga0075423_11658493	Not Available	688	Open in IMG/M
3300009177\|Ga0105248_10465515	All Organisms → cellular organisms → Bacteria → Proteobacteria	1425	Open in IMG/M
3300009553\|Ga0105249_10399981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium sarraceniae	1403	Open in IMG/M
3300010366\|Ga0126379_10160845	All Organisms → cellular organisms → Bacteria → Proteobacteria	2108	Open in IMG/M
3300010397\|Ga0134124_10054611	Not Available	3367	Open in IMG/M
3300010397\|Ga0134124_12757763	Not Available	535	Open in IMG/M
3300010401\|Ga0134121_10650484	Not Available	993	Open in IMG/M
3300010403\|Ga0134123_10083804	All Organisms → cellular organisms → Bacteria → Proteobacteria	2492	Open in IMG/M
3300011421\|Ga0137462_1111362	Not Available	657	Open in IMG/M
3300011444\|Ga0137463_1168143	Not Available	825	Open in IMG/M
3300012204\|Ga0137374_10475953	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria	975	Open in IMG/M
3300012204\|Ga0137374_10552236	Not Available	885	Open in IMG/M
3300012204\|Ga0137374_10941721	Not Available	630	Open in IMG/M
3300012206\|Ga0137380_10475168	Not Available	1103	Open in IMG/M
3300012207\|Ga0137381_10306410	All Organisms → cellular organisms → Bacteria	1383	Open in IMG/M
3300012209\|Ga0137379_11593613	Not Available	552	Open in IMG/M
3300012351\|Ga0137386_10918065	Not Available	626	Open in IMG/M
3300012353\|Ga0137367_10276535	Not Available	1204	Open in IMG/M
3300012353\|Ga0137367_10710663	Not Available	699	Open in IMG/M
3300012354\|Ga0137366_11115589	Not Available	542	Open in IMG/M
3300012360\|Ga0137375_10213106	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria	1816	Open in IMG/M
3300012360\|Ga0137375_10213106	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria	1816	Open in IMG/M
3300012360\|Ga0137375_10594171	Not Available	923	Open in IMG/M
3300012532\|Ga0137373_10103665	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	2480	Open in IMG/M
3300012948\|Ga0126375_10440834	All Organisms → cellular organisms → Bacteria	954	Open in IMG/M
3300012971\|Ga0126369_10029808	All Organisms → cellular organisms → Bacteria	4477	Open in IMG/M
3300012971\|Ga0126369_10328749	All Organisms → cellular organisms → Bacteria	1542	Open in IMG/M
3300014325\|Ga0163163_10369022	All Organisms → cellular organisms → Bacteria → Proteobacteria	1492	Open in IMG/M
3300015371\|Ga0132258_10222873	All Organisms → cellular organisms → Bacteria	4589	Open in IMG/M
3300015371\|Ga0132258_12615467	Not Available	1261	Open in IMG/M
3300015372\|Ga0132256_101009658	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	947	Open in IMG/M
3300015373\|Ga0132257_100301177	Not Available	1926	Open in IMG/M
3300015373\|Ga0132257_104185156	Not Available	525	Open in IMG/M
3300015374\|Ga0132255_100688382	All Organisms → cellular organisms → Bacteria → Proteobacteria	1517	Open in IMG/M
3300017656\|Ga0134112_10503073	Not Available	513	Open in IMG/M
3300018084\|Ga0184629_10040976	All Organisms → cellular organisms → Bacteria	2063	Open in IMG/M
3300019233\|Ga0184645_1109859	Not Available	599	Open in IMG/M
3300019259\|Ga0184646_1567248	Not Available	687	Open in IMG/M
3300020078\|Ga0206352_11081305	Not Available	563	Open in IMG/M
3300024232\|Ga0247664_1009763	All Organisms → cellular organisms → Bacteria → Proteobacteria	2211	Open in IMG/M
3300024254\|Ga0247661_1038012	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	870	Open in IMG/M
3300024254\|Ga0247661_1051837	Not Available	752	Open in IMG/M
3300024323\|Ga0247666_1046615	Not Available	882	Open in IMG/M
3300025885\|Ga0207653_10227796	Not Available	709	Open in IMG/M
3300025910\|Ga0207684_11609280	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Geminicoccaceae → unclassified Geminicoccaceae → Geminicoccaceae bacterium	526	Open in IMG/M
3300025922\|Ga0207646_10593499	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria	994	Open in IMG/M
3300025922\|Ga0207646_11156262	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Geminicoccaceae → unclassified Geminicoccaceae → Geminicoccaceae bacterium	680	Open in IMG/M
3300025936\|Ga0207670_10000021	All Organisms → cellular organisms → Bacteria	155646	Open in IMG/M
3300025941\|Ga0207711_10285638	All Organisms → cellular organisms → Bacteria → Proteobacteria	1520	Open in IMG/M
3300026118\|Ga0207675_100765645	Not Available	977	Open in IMG/M
3300027821\|Ga0209811_10001121	All Organisms → cellular organisms → Bacteria → Proteobacteria	9443	Open in IMG/M
3300027880\|Ga0209481_10014603	All Organisms → cellular organisms → Bacteria	3415	Open in IMG/M
3300027909\|Ga0209382_10626790	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria	1167	Open in IMG/M
3300027909\|Ga0209382_11577009	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	650	Open in IMG/M
3300028065\|Ga0247685_1028838	Not Available	667	Open in IMG/M
3300028380\|Ga0268265_11961880	Not Available	592	Open in IMG/M
3300028381\|Ga0268264_11757054	Not Available	630	Open in IMG/M
3300031562\|Ga0310886_10390181	Not Available	819	Open in IMG/M
3300031854\|Ga0310904_11344866	Not Available	518	Open in IMG/M
3300031858\|Ga0310892_11259395	Not Available	528	Open in IMG/M
3300031908\|Ga0310900_11170197	Not Available	639	Open in IMG/M
3300031944\|Ga0310884_11011287	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Geminicoccaceae → unclassified Geminicoccaceae → Geminicoccaceae bacterium	517	Open in IMG/M
3300033416\|Ga0316622_100960238	All Organisms → cellular organisms → Bacteria	997	Open in IMG/M
3300033487\|Ga0316630_10570517	Not Available	940	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	62.60%
Host-Associated	Host-Associated	37.40%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	58.78%
Plants	Host-Associated → Plants	37.40%
Aquatic	Environmental → Aquatic	3.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	58.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere	24.43%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.21%
Sediment	Environmental → Aquatic → Sediment	2.29%
Freshwater	Environmental → Aquatic → Freshwater	1.53%
Roots	Host-Associated → Plants → Roots	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	33.59%
Loam	Environmental → Terrestrial → Soil → Loam	23.66%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	23.66%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.40%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.82%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.29%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.53%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.53%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.76%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	23.66%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	19.08%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.40%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.58%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.82%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.82%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.82%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.29%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.53%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.53%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.53%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	21.37%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	12.98%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	7.63%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	6.11%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.82%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.82%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.05%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.05%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.29%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.29%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.53%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.53%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.53%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.53%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.76%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.76%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011421	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT769_2	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300019233	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024232	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK05	Environmental	Open in IMG/M
3300024254	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK02	Environmental	Open in IMG/M
3300024323	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK07	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028065	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK26	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300033416	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_C	Environmental	Open in IMG/M
3300033487	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_A	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0063356_1055663541	3300004463	Arabidopsis Thaliana Rhizosphere	MWRMLGVLVALVALGMVARSHGTAIAAADKQLICHVSNESGARIIEVAVKAVPEHLANHGDCLINSTDRSLIGTACNPTDANGNDICDVQP*
Ga0062595_1025471182	3300004479	Soil	MWRLMAVLIALAAMVGLTMVHGSANAQPNGRPAADKQLICHVTDDNGAHIIEVALPAVPAHLRNHGDCIINSDDRTLIGDPCNPTDANNDDICDIQP*
Ga0066674_104026291	3300005166	Soil	MKRFMAVLFALVALAGLVMVHGTVHAQAGRPAADKQLICHVTDDNGAHIIEVALSAVPAHLTQHGDCLINSDDRTLIGDPCNPTDANNDDVCDVQP*
Ga0070690_1000860792	3300005330	Switchgrass Rhizosphere	MWRLMAVFVAFAALVGLTMVHGTVSAQPPGRPAADKQLICHVSDDHSAHIIEVAEPAVPAHLRNHGDCLINSTDRTLIGEPCDPTDANDNDICDIQP*
Ga0070690_1017564191	3300005330	Switchgrass Rhizosphere	MWRLMAAFAGVAALVGLMAFHGSAVAQPDGRPAADKQLICHVSDDNGAHIIEVAQPAVPAHLRNHGDCIINSDDRTLIGEPCNPTDANNDDICDIQP*
Ga0066388_1007202622	3300005332	Tropical Forest Soil	MWRLMALLFALAAVVGLAMVHGSAYAQNGDPAADKQLICHVTDDNGAHIIEVAEPAVPAHLRNHGDCLINSTDRTLIGDPCDPTDANNDDICDVQP*
Ga0066388_1046084292	3300005332	Tropical Forest Soil	MRRIFGILAWVLALGVIVSSHGRVSAQPRAEKQMLCHVTGNAGAHIIEVSVNAVPAHLRNHGDCKINSTDRTLIGTPCNPTDANNDDICDVQ
Ga0066388_1087109182	3300005332	Tropical Forest Soil	MKRLLSVLAALTVLAVLTMSHGNSAAQPPAGKKQLICHREDDKGAHIIEVSVNAVPAHLRNHDDCIINSTNRELIGQPCDPTDANNNDICDVQP*
Ga0070689_10000002640	3300005340	Switchgrass Rhizosphere	MWRLTAVLMAVAALVGLAMFHGTVQAQPPGRPAADKQLICHVSDDNGAHIIEVAEPAVPAHLANHGDCIINSEDRSLIGDPCDPTDANNNDICDIQP*
Ga0070687_1000510931	3300005343	Switchgrass Rhizosphere	MWRLMAVFVAFAALVGLTMVHGTVSAQPPGRPAADKQLICHVSDDHSAHIIEVAEPAVPAHLRNHGDCLINSTDRTLIGEPCDPTDANDNDICD
Ga0070692_107615811	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MKRVLGVLAALLALGFLTMSHSSKAAPAPEKKQMVCHRADSTSAHIIEISIHAVPAHLRNHDDCLINSEDRSLIGQPCDPTDANANDICDIQP*
Ga0070688_1004376992	3300005365	Switchgrass Rhizosphere	AALVGLTMFHGTVQAQPPGRPAAEKTMLCHVSDDNGAHIIEVADPAVPAHLANHGDCIINSDDRSLIGQPCDPTDANNNDICDIQP*
Ga0070705_1003423413	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	ALTALAVLTMSHGNSAAQPPAGKKQLICHNADSTGAHIIEVSVHAVPAHLRNHGDCIINSTNRDLIGQPCDPTDANHNDICDVQP*
Ga0070694_1000490941	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MWRLTAVVIAVAALVGLAMVHGTVQAQPPGRPAADKQLICHVTDDNGAHIIEVALPAVPAHLANHGDCIINSEDRSLIGNDCDPTDANNNDICDIQP*
Ga0070694_1003415962	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MWRLMAVFVAFAALVGLTMVHGTVSAQPPGRPAADKQLICHVSDDHSAHIIEVAEPAVPAHLRNHGDCLINSTDRTLIGEPCDPTDANDNDICDVQP*
Ga0070694_1015180092	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MWRLTAVMLAVAALVGLTMFHGTVQAQPPGRPAAEKTMLCHVSDDNGAHIIEVADPAVPAHLANHGDCIINSDDRSLIGQPCDPTDAN
Ga0070707_1001059013	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MKRLLSVLAALTVLAVLTTSHGNSAAQPPAGKKQLICHNADSTGAHIIEVSVHAVPAHLRNHGDCIINSTNRDLIGQPCDPTDANHNDICDVQP*
Ga0070707_1005097542	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MWRLTGVLITVLALAVLTMSHGTPTANAAADKQLICHVSDNAGAHIIEVSVHAVPAHLRNHGDCIITSTDRSLIGQ
Ga0073909_1000031611	3300005526	Surface Soil	MWRLMAVFVAVAAMVGLTMVHGTVSAQPHGRPAADKQLICHVSDDNSAHIIEVAEPAVPAHLRNHGDCLINSTDRTLIGEPCNPTDANNDDICDVQP*
Ga0073909_100136964	3300005526	Surface Soil	MKRLLCVLCAITALAVLTMSHGNSAADPPAGKKQLICHNADSTGAHIIEVSVHAVPAHLRNHGDCIINSTNRDLIGQPCDPTDANHNDICDVQP*
Ga0070686_1001218492	3300005544	Switchgrass Rhizosphere	MWRLMAVFVAFAAMVGLTMVHGTVSAQPPGRPAADKQLICHVSDDHSAHIIEVAEPAVPAHLRNHGDCLINSTDRTLIGEPCDPTDANDNDICDVQP*
Ga0070686_1004062982	3300005544	Switchgrass Rhizosphere	RLTGVLFVLALAALTLSHGTRTAQAAADKQLVCHVTGNGADGDSLSGPQRAHIIEVSVHAVPAHLRNHGDCLITSTDRSLIGQPCDPTDANDNDICDVQP*
Ga0070695_1006324402	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MKRLLSVLAALTVLAVLTMSHGNSAAQPPAGKKQLICHNADSTGAHIIEVSVHAVPAHLRNHGDCIINSTNRDLIGQPCDPTDANNNDICDVQP*
Ga0070704_1001121502	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MWRLTGVLITVLALAVLTMSHGTPTANAAADKQLICHVSDNAGAHIIEVSVHAVPAHLRNHGDCIITSTDRSLIGQPCDPTDANQNDVCDIQP*
Ga0070704_1001179451	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MWRLMAVFVAFAALVGLTMVHGTVSAQPPGRPAADKQLICHVSDDNSAHVIEVAEPAVPAHLRNHGDCLINSTDRTLIGEPCNPTDANNDDICDVQP*
Ga0070704_1003063391	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	KMWRLMAVFVAFAALVGLTMVHGTVSAQPPGRPAADKQLICHVSDDHSAHIIEVAEPAVPAHLRNHGDCLINSTDRTLIGEPCDPTDANDNDICDVQP*
Ga0070704_1003437832	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MWRLTAVVIAVAALVGLAMVHGTVQAQPPGRPAADKQLICHVTDDNGAHIIEVALPAVPAHLANHGDCIINSEDRSLIGNDCDPTDANNNDIC
Ga0068859_1009816732	3300005617	Switchgrass Rhizosphere	MWRLTAVMLAVAALVGLTMFHGTVQAQPPGRPAAEKTMLCHVSDDNGAHIIEVADPAVPAHLANHGDCIINSDDRSLIGQPCDPTDANNNDICDIQP*
Ga0066905_1000448642	3300005713	Tropical Forest Soil	VKTLMGVLLAMSLVWGLALTHGTGNAQPPGQTREGKQLICHVTGNAGAHIIEVADPAVPAHLRNHGDCLINSTNRALIGEPCDPTDANNNDVCDIQP*
Ga0066905_1015819201	3300005713	Tropical Forest Soil	MRRFAILFAVLGLLGLAMSHQVLLAQPGKQLICHIADDQQAFIIEVAVPAVPFHLEQHGDCTINSTERSLIGEPCDPTDANTNDICDVQP*
Ga0068861_1000459463	3300005719	Switchgrass Rhizosphere	MWRLTAVMLAIAALVGLTMFHGTVQAQPPGRPAAEKTMLCHVSDDNGAHIIEVADPAVPAHLANHGDCIINSDDRSLIGQPCDPTDANNNDICDIQP*
Ga0068861_1005873022	3300005719	Switchgrass Rhizosphere	LVAMLALAGLTMFHGTTKADPDPAKKQMVCHRDSIGAHLIYISNHAVPAHLRNHGDCLINSEDRTLVGQPCDLTDANDNDICDIQP*
Ga0066903_1024580322	3300005764	Tropical Forest Soil	MWRFTAVLVAIAAMLGLAMIHPAVYAQPSHGHPHADKQLICHVADSTSAHIIEVALPAVPAHLRNHGDCLINSTDRNLIGQPCNPTDANGDDICDIQP*
Ga0068863_1005100901	3300005841	Switchgrass Rhizosphere	KMWRLMAVFVAFAALVGLTMVHGTVSAQPPGRPAADKQLICHVSDDHSAHIIEVAEPAVPAHLRNHGDCLINSTDRTLIGEPCDPTDANDNDICDIQP*
Ga0068863_1010195582	3300005841	Switchgrass Rhizosphere	MWRLMAVVIALAAMVGLTMVHGSASAQPNGRPAADKQLICHVTDDNGAHIIEVAQPAVPAHLRNHGDCIILSEDRTLIGEPCDPTDANDNDICD
Ga0068858_1010332411	3300005842	Switchgrass Rhizosphere	MWRLMAVFVAFAALVGLTMVHGTVSAQPPGRPAADKQLICHVSDDNSAHIIEVAEPAVPAHLRNHGDCLINSTDRTLI
Ga0068860_1002299191	3300005843	Switchgrass Rhizosphere	MKRFLAVLFALVALAGLVLVHGTVHAQAGTPAADKQLICHVTDDSGAHIIEVALPAVPAHLREHGDCLINSKDRTLIGDDCNPTDANNDDVCDVQP*
Ga0066652_1002026863	3300006046	Soil	MAVLFALVALAGLVMVHGTVHAQAGRPAADKQLICHVTDDNGAHIIEVALSAVPAHLTQHGDCLINSDDRTLIGDPCNPTDANNDDVCDVQP*
Ga0066652_1003741262	3300006046	Soil	MKRLLGVLAALLALALLTMSHSSSRAQPAPEKKQLVCHRADSTSAHIIDISIHAVPAHLRNHGDCLINSEDRTLVGQPCDPTDANQDDICDVQP*
Ga0070715_108906342	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MKRLLCVLCALTALAVLTMSHGNSAAQPPAGKKQLICHNADSTGAHIIEVSVHAVPAHLRNHGDCIINSTNRDLIGQPCDPTDANHND
Ga0075428_1000263806	3300006844	Populus Rhizosphere	MWRILGVLIVIAGLGAMSTFHGASTAAAAAEKQLICHVSEEEGNHIIEVSVNAVPAHLENHGDCLINSTDRSLIETPCDPTDANGNDICDIQP*
Ga0075430_1008126761	3300006846	Populus Rhizosphere	MWRLMGILVALSALAALATLHGTPVAQAGQDKQLICHVSDDQGAHIIEVAEPAVPAHLENHGDCLINSTDRELIGDECDPTDANGNDICDIQP*
Ga0075431_1009446472	3300006847	Populus Rhizosphere	MWRILGVLIAIAGLGAMSTFHGASTAAAAAEKQLICHVSEEEGNHIIEVSVNAVPAHLENHGDCLINSTDRSLIETPCDPTDANGNDICDIQP*
Ga0075431_1021214362	3300006847	Populus Rhizosphere	MWRLTAVVIAVAALVGLAMVHGTVQAQPPGRPAADKQLICHVTDDNGAHIIEVAEPAVPAHLANHGDCIINSEDRSLIGDPCNPTDANNNDICDIQP*
Ga0075433_100052965	3300006852	Populus Rhizosphere	MKRVLGVLVALLALGFLTMSHSSKAGPAPEKKQLVCHQADSTGAHIIEISIHAVPAHLRNHGDCLINSEDRSLIGQPCDTTDANGNDICDIQP*
Ga0075433_110682662	3300006852	Populus Rhizosphere	MRRILGILAWLLALGAIAFSHSQSSAQPRAEKQLLCHVTGQSGAHIIEVSVHAVPAHLRNHGDCMITSTDRSLIGTPCDPTDANGNDICDIQP*
Ga0075433_112883762	3300006852	Populus Rhizosphere	MWRLLAVMVAAVGLAVLVTSHGTVSAQPAADKQLICHVSDDPGPHIIEVAVAAVPKHLEKHGDCIINSTDRSLIDQPCDP
Ga0075425_1002250563	3300006854	Populus Rhizosphere	MKRLLSVLAALTVLAVLTMSHGNSAAQPPAGKKQLICHNADSTGAHIIEVSVHAVPAHLRNHGDCIINSTNRDLIGQPCDPTDANHNDICDVQP*
Ga0075429_1000328703	3300006880	Populus Rhizosphere	MWKLMGFLVVVSLVTSLAMFHSASPAQARADKQLICHVSDSQGAHIIEVAEPAVPAHLRNHGDCLINSTDRALIGEACDPTDANDNDICDIQP*
Ga0075424_1008409662	3300006904	Populus Rhizosphere	MKRLLSVLAALTVLAVLTMSHGNSAAHPPAGKKQLICHNADSTGAHIIEVSVHAVPAHLRNHGDCIINSTNRDLIGQPCDPTDANHNDICDVQP*
Ga0075436_1003010722	3300006914	Populus Rhizosphere	MWRLMAVFVAFAALVGLTMFHGTVSAQPPGRPAADKQLICHVSDDNSAHIIEVAEPAVPAHLRNHGDCLINSTDRTLIGEPCNPTDANNDDICDVQP*
Ga0075436_1009581352	3300006914	Populus Rhizosphere	MKRFLAVLFALVALAGLVLVHGTVHAQAGTPAADKQLICHVTDDNGAHIIEVALPAVPAHLREHGDCLINSDDRTLIGDDCNPTDANNDDVCDVQP*
Ga0079219_110756542	3300006954	Agricultural Soil	GLAMVHGTVYAQAQGHPAADKQLICHVSDDNGAHIIEVARPAVPAHLRNHGDCLINSTDRTLIGQPCDPTDANNDDICDIQP*
Ga0075435_1017051131	3300007076	Populus Rhizosphere	LAVLTMSHGNSAAQPPAGKKQLICHNADSTGAHIIEVSVHAVPAHLRNHGDCIINSTNRDLIGQPCDPTDANHNDICDVQP*
Ga0066710_1011790441	3300009012	Grasslands Soil	LRVNKEVKMWRLTGVLVAVMAIVGLAMSHGRLSAQPAADKQLICHVSADEGNHIIEVSVNAVPAHLKNHGDCLIISTDRSLIGQPCDATDANDNDICDIQP
Ga0066710_1039844561	3300009012	Grasslands Soil	MWRLMGVLVAVLALAGLTLSHGKLSAQPAADKQLRCHVCPDEGDHVIEVSVKAAPAHLKHGDCLINSTDRSLIEQPCDATDANGNDICDVQP
Ga0111539_102574573	3300009094	Populus Rhizosphere	MWRLTAVVIAVAALVGLAMVHGTVQAQPPGRPAADKQLICHVTDDNGAHIIEVAQPAVPAHLANHGDCIINSEDRSLIGNDCDPTDANNNDICDIQP*
Ga0111539_114222511	3300009094	Populus Rhizosphere	MWKLMGFLVVVSLVTGLAMFHSASPAQARADKQLICHVSDSQGAHIIEVAEPAVPAHLRNHGDCLINSTDRALIGEACDPTDANDNDICDIQP*
Ga0075418_103408602	3300009100	Populus Rhizosphere	LLRRFDMWRLMGVLLALTALVALATLHGTGYAQGNTQTREGKQLICHVSDDVGAHIIEVADPAVPKHLELHGDCLINSTNRALIGDPCDPTDGNNNDICDIQP*
Ga0075418_108472482	3300009100	Populus Rhizosphere	MGVLVAMLALAGLTMFHGTTKADPDPAKKQMVCHRDSIGAHLIYISNHAVPAHLRNHGDCLINSEDRTLVGQPCDLTDANDNDICDVQP*
Ga0114129_124331411	3300009147	Populus Rhizosphere	AVVALVGLAMVHGTVQAQPPGRPAADKQLICHVTDDNGAHIIEVAQPAVPAHLANHGDCIINSEDRSLIGNDCDPTDANNNDICDIQP*
Ga0111538_104990942	3300009156	Populus Rhizosphere	MLAVAALVGLTMFHGTVQAQPPGRPAAEKTMLCHVSDDNGAHIIEVADPAVPAHLANHGDCIINSDDRSLIGQPCDPTDANNNDICDIQP*
Ga0111538_105970292	3300009156	Populus Rhizosphere	MKRVLGVLVAVLALGFLTMSHSSKAGPAPEKKQLVCHQADSTGAHIIEISIHAVPAHLRNHGDCLINSEDRSLIGQPCDTTDANGNDICDIQP*
Ga0111538_122044241	3300009156	Populus Rhizosphere	MGVLVAMLALAGLTMFHGTTKADPDPAKKQMVCHRDSIGAHLIYISNHAVPAHLRNHGDCLINSEDRTLVGQPCDLTDANDNDICD
Ga0075423_100389383	3300009162	Populus Rhizosphere	MVAAVGLAVLVTSHGTVSAQPAADKQLICHVSDDPGPHIIEVAVAAVPKHLEKHGDCIINSTDRSLIDQPCDPTDANDNDICDVQP*
Ga0075423_104694853	3300009162	Populus Rhizosphere	MAVFVAFAALVGLTMVHGTVSAQPPGRPAADKQLICHVSDDNSAHIIEVAEPAVPAHLRNHGDCLINSTDRTLIGEPCNPTDANNDDICDVQP*
Ga0075423_108517462	3300009162	Populus Rhizosphere	MTVFLAVCALAGLAMLHGAVFAQPGHGHPAADKQLICHVTDENGAHIIEVAVAAVPAHLREHGDCIINSTNRDLIGEPCNPTDANNNDICDVQP*
Ga0075423_116584931	3300009162	Populus Rhizosphere	MWRLTGVLITVLALAVLTMSHGTPTANAAADKQLICHVSGTAGAHIIEVALHAVPAHLRNHGDCIINSTDRSLIGQP
Ga0105248_104655152	3300009177	Switchgrass Rhizosphere	MAVFVAFAALVGLTMVHGTVSAQPPGRPAADKQLICHVSDDHSAHIIEVAEPAVPAHLRNHGDCLINSTDRTLIGELCDPTDANDNDICDVQP*
Ga0105249_103999811	3300009553	Switchgrass Rhizosphere	MWRLTGVLVVLALAALTMSHGTRTAQAAADKQLVCHVTGNGADGDSLSGAPRAHVIEISVNAVPAHLRNHGDCLLNSTDRGLIGNPCDPTDANDNDICDVQP*
Ga0126379_101608452	3300010366	Tropical Forest Soil	MWRFTAVLFAIAAMVGLAMVHGSVYAQPSHGNPHADKQLICHVADSTSAHIIEVALPAVPAHLRNHGDCIINSTDRNLIGQPCDPTDANGDDICDIQP*
Ga0134124_100546113	3300010397	Terrestrial Soil	MAVFVAFAAMVGLTMVHGTVSAQPPGRPAADKQLICHVSDDHSAHIIEVAEPAVPAHLRNHGDCLINSTDRTLIGEPCDPTDANDNDICDVQP*
Ga0134124_127577632	3300010397	Terrestrial Soil	MAVVIALAAMVGLTMVHGSASAQPNGRPAADKQLICHVTDDNGAHIIEVAQPAVPAHLRNHGDCIILSEDRTLIGE
Ga0134121_106504842	3300010401	Terrestrial Soil	MFVAFAALVGLTMVHGTVSAQPPGRPAADKQLICHVSDDNSAHIIEVAEPAVPAHLRNHGDCLINSTDRTLIGEPCNPTDANNDDICDVQP*
Ga0134123_100838043	3300010403	Terrestrial Soil	MLAIAALVGLTMFHGTVQAQPPGRPAAEKTMLCHVSDDNGAHIIEVADPAVPAHLANHGDCIINSDDRSLIGQPCDPTDANNNDICDIQP*
Ga0137462_11113622	3300011421	Soil	MWRLMGVLAAVLALAGITMLHGAVSAQAAAEKQILCHVSPDEGDHFIEVSVNAVPAHLRNHGDCLISSTDRTLIDQPCDATDADGDDICDVQP*
Ga0137463_11681431	3300011444	Soil	MWKLMGFLVVVSLVTGLAMFHSASPAQAGADKQLICHVSDSQGAHIIEVAEPAVPAHLRNHGDCLINSTDRALIGEACDPTDANDNDICDIQP*
Ga0137374_104759531	3300012204	Vadose Zone Soil	MGVLVAVLALAGLTFSHGTPTAQAAAAKQLICHVSDAAGAHIIEVSVHAVPAHLANHGDCLINSTDRSLIGQPCDPTDANGNDICDVQP*
Ga0137374_105522362	3300012204	Vadose Zone Soil	MWRLTGVLVAVLALVGLAMSHGRLSAQPAADKQMICHVSPDEGDHIIEVSVNAVPAHLNHGDCLINSTDRSLIEQPCDVTDANDNDICDVQP*
Ga0137374_109417212	3300012204	Vadose Zone Soil	MWRLLGLLVAVIAVAGLTMSHGTPTVQAADKQLICHVSPDEGDHIIEVSVNAVPAHLENHGDCIINSTDRTLIEQPCDATDANGDDVCDVQP*
Ga0137380_104751681	3300012206	Vadose Zone Soil	MWRLTGVLVAVLALVGLAMSHGRLSAQPAADKQLLCHVSPDEGDHIIEVSVNAVPAHLDHGDCKINSTDRSLIEQPCDATDADGDDVCDVQP*
Ga0137381_103064101	3300012207	Vadose Zone Soil	MWRLTGVLVAVLALVGLAMSHGRLSAQPAADKQLLCHVSPDEGDHIIEVSVNAVPAHLNHGDCKINSTDRSLIEQPCDATDADGDDVCDVQP*
Ga0137379_115936131	3300012209	Vadose Zone Soil	GVLVAVLAIVGLAMSHGRLSAQPAADKQLLCHVSPDEGDHIIEVSVNAVPAHLDHGDCKINSTDRSLIEQPCDATDADGDDVCDVQP*
Ga0137386_109180652	3300012351	Vadose Zone Soil	MWRLTGVLVAVLALVGLAMSHGRLSAQPAADKQLLCHVSPDEGDHIIEVSVNAVPAHLDHGDCKINSTDRSLIEQP
Ga0137367_102765352	3300012353	Vadose Zone Soil	MWRLTGVLVAVMAIVGLAMSHGRLSAQPAADKQMICHVSPDEGDHIIEVSVNAVPAHLNHGDCLINSTDRSLIEQPCDVTDANDNDICDVQP*
Ga0137367_107106631	3300012353	Vadose Zone Soil	MWRLTSVLLAVCALAGLAMLHGAVFAQGPSQGQPAADKQLICHVTDDNGAHIIEVAVAAVPKHLEQHGDCIINSTNRELI
Ga0137366_111155891	3300012354	Vadose Zone Soil	MWRLTGVLVAVLALVGLAMSHGRLSAQPAADKQLLCHVSPDEGDHIIEVSVNAVPAHLNHGDCKINSTDRTLIEQPCDATDANGDDICDVQP*
Ga0137375_102131061	3300012360	Vadose Zone Soil	AVSAPRRTVRNVPRLGKGRFNIWRLMGLFAAVLALALLTLSHGTPTVQAADKQLICHVSPDEGDHIIEVSVNALPAYLENHGDCLINSTDRTLIEQPCDVTDANGDDICDVQP*
Ga0137375_102131062	3300012360	Vadose Zone Soil	MGVLVAVLALAGLTLSHGTPTAQAAAAKQLICHVSDAAGAHIIEVSVHAVPAHLANHGDCLINSTDRSLIGQPCDPTDANGNDICDVQP*
Ga0137375_105941713	3300012360	Vadose Zone Soil	LAGLAMLHGAVFAQGPSQGQPAADKQLICHVTDDNGAHIIEVAVAAVPKHLEQHGDCIINSTNRELIGEPCNPTDANNNDICDVQP*
Ga0137373_101036652	3300012532	Vadose Zone Soil	MWRLTGVLVAVLALVGLAMSHGRLSAQPAADKQLICHVSPDEGDHIIEVSVNAVPAHLNHGDCKINSTDRSLIEQPCDATDANDNDICDVQP*
Ga0126375_104408341	3300012948	Tropical Forest Soil	RSVANGAKFSTLEPGGNNMWRLTGVTLATLAILGLTMSHGLLAEPQGKQLLGHVSEPDEPNHIIEVALPAVPAHLENHGDCLINSTDRSLIDQPCDVTDGNNNDICDVQP*
Ga0126369_100298085	3300012971	Tropical Forest Soil	MLRLFSILVALAGLAVLSVSHGTVSAQPRADKQLICHVADESRSFIIEVAVPAVPAHLAHGDCLINSTDRDLIGDECDPTDANDNDICDVQP*
Ga0126369_103287492	3300012971	Tropical Forest Soil	MWRFTAVLVAIAAMLGLAMIHPAVYAQPSHGHPHADKQLICHVADSTSAHIIEVALPAVPAHLRNHGDCLINSTDRDLIGQPCNPTDANGDDICDIQP*
Ga0163163_103690223	3300014325	Switchgrass Rhizosphere	MAVFVAFAALVGLTMVHGTVSAQPPGRPAADKQLICHVSDDHSAHIIEVAEPAVPAHLRNHGDCLINSTDRTLIGEPCDPTDANDNDICDIQP*
Ga0132258_102228733	3300015371	Arabidopsis Rhizosphere	MKRLLGVLVALLALGFLTISHSSKAGPAPEKKQLVCHQADSTSAHIIEISIHAVPAHLRNHGDCLINSEDRSLIGQPCDPTDANANDICDIQP*
Ga0132258_126154671	3300015371	Arabidopsis Rhizosphere	MWRLTAVVIAVAALVGLAMVHGTVQAQPPGRPAADKQLICHVTDDNGAHIIEVAEPAVPAHLRNHGDCIINSEDRSLIGEPCDPTDANDNDICDIQP*
Ga0132256_1010096581	3300015372	Arabidopsis Rhizosphere	MAVFVAFAALVGLTMVHGTVSAQPPGRPAADKQLICHVSDDNSAHIIEVAEPAVPAHLRNHGDCLINSTDRTLIGEPCN
Ga0132257_1003011771	3300015373	Arabidopsis Rhizosphere	WRLLSILVALAALTGLSVSHRPVSAQPAADKQLICHVADESRTFIIEVAVPAVPAHLAHGDCLINSTDRDLIGDECDPTDANDNDICDIQP*
Ga0132257_1041851562	3300015373	Arabidopsis Rhizosphere	MAVVIALAAMVGLTMVHGSASAQPNGRPAADKQLICHVTDDNGAHIIEVAQPAVPAHLRNHGDCIILSEDRT
Ga0132255_1006883822	3300015374	Arabidopsis Rhizosphere	MAVFVAFAALVGLTMVHGTVSAQPPGRPAADKQLICHVSDDNSAHVIEVAEPAVPAHLRNHGDCLINSTDRTLIGEPCNPTDANNDDICDVQP*
Ga0134112_105030731	3300017656	Grasslands Soil	VAVLAIVGLAMSHGRLSAQPAADKQLICHVSADEGNHIIEVSVNAVPAHLKNHGDCLIISTDRSLIGQPCDATDANDNDICDIQP
Ga0184629_100409762	3300018084	Groundwater Sediment	MWRLTGVLAAVLALAVLTMSHGTPTAQAAAEKQLVCHVSDDEGAHIIDISVHAVPAHLRNHGDCLINSEDRSLVGQPCDPTDANDNDICDVQP
Ga0184645_11098592	3300019233	Groundwater Sediment	MWRLMGVLVAVLALAGLTLSHGTPSAAAEKQLVCHVSDDAGAHIIEVSVNAVPAHLANHGDCLINSTDRSLIGEPCNP
Ga0184646_15672482	3300019259	Groundwater Sediment	MRRLMGLFAAVLALALLTLSHGTPTVQAGDKQLICHVSPDEGDHIIEVSVNALPAHLGNHGDCLINSTDRTLIEQPCDVTDANGDDICDVQP
Ga0206352_110813052	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	MWRLMAVFVAFAALVGLTMVHGTVSAQPPGRPAADKQLICHVSDDHSAHIIEVAEPAVPAHLRNHGDCLINSTDRTLIGEPCDPTDANDNDIC
Ga0247664_10097633	3300024232	Soil	MWRLMAVFVAFAAMVGLTMVHGTVSAQPPGRPAADKQLICHVSDDNGAHIIEVSEHAVPAHLRNHGDCLINSTDRTLIGEPCNPTDANDDDICDVQP
Ga0247661_10380121	3300024254	Soil	MWKLMGFLVVVSLVTGLAMFHSASPAQARADKQLICHVSDSQGAHIIEVAEPAVPAHLRNHGDCLINSTDRALIGEACDPTDANDNDICDIQP
Ga0247661_10518372	3300024254	Soil	MWRLMAVMIALAAMVGLTMAHGSASAQPNGRGQDKQLICHVSDDNGAHIIDVAEPAVPAHLRNHGDCLINSDDRSLIGEPCNPTDANNDDICDIQP
Ga0247666_10466151	3300024323	Soil	MWRLMAVFVAFAALVGLTMVHGTVSAQPPGRPAADKQLICHVSDDNSAHIIEVSEHAVPAHLRNHGDCLINSTDRTLIGEPCNPTDANDDDICDVQP
Ga0207653_102277962	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MWRLMAVFVAFAALVGLTMVHGTVSAQPPGRPAADKQLICHVSDDHSAHIIEVAEPAVPAHLRNHGDCLINSTDRTLIGEPCDPTDANDNDICDIQP
Ga0207684_116092801	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MAVFVAFAALVGLTMVHGTVSAQPPGRPAADKQLICHVSDDNSAHVIEVAEPAVPAHLRNHGDCLINSTDRTLIGEPCDPTDANDNDICDIQP
Ga0207646_105934992	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MKRLLSVLAALTVLAVLTTSHGNSAAQPPAGKKQLICHNADSTGAHIIEVSVHAVPAHLRNHGDCIINSTNRDLIGQPCDPTDANHNDICDVQP
Ga0207646_111562621	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MWRLMAVLVALAAIVGLTAVHSASAQPNGRPAADKQLICHVSDDNGAHIIEVAQPAVEAHLRNHGDCIINSEDRTLIGEPCDPTDANNNDICDIQP
Ga0207670_10000021114	3300025936	Switchgrass Rhizosphere	MWRLTAVLMAVAALVGLAMFHGTVQAQPPGRPAADKQLICHVSDDNGAHIIEVAEPAVPAHLANHGDCIINSEDRSLIGDPCDPTDANNNDICDIQP
Ga0207711_102856382	3300025941	Switchgrass Rhizosphere	MWRLMAVFVAFAALVGLTMVHGTVSAQPPGRPAADKQLICHVSDDHSAHIIEVAEPAVPAHLRNHGDCLINSTDRTLIGEPCDPTDATDNDICDVQP
Ga0207675_1007656453	3300026118	Switchgrass Rhizosphere	MLALAGLTMFHGTTKADPDPAKKQMVCHRDSIGAHLIYISNHAVPAHLRNHGDCLINSEDRTLVGQPCDLTDANDNDICDIQP
Ga0209811_100011216	3300027821	Surface Soil	MWRLMAVFVAVAAMVGLTMVHGTVSAQPHGRPAADKQLICHVSDDNSAHIIEVAEPAVPAHLRNHGDCLINSTDRTLIGEPCNPTDANNDDICDVQP
Ga0209481_100146032	3300027880	Populus Rhizosphere	MWKLMGFLVVVSLVTSLAMFHSASPAQARADKQLICHVSDSQGAHIIEVAEPAVPAHLRNHGDCLINSTDRALIGEACDPTDANDNDICDIQP
Ga0209382_106267902	3300027909	Populus Rhizosphere	MWRILGVLIVIAGLGAMSTFHGASTAAAAAEKQLICHVSEEEGNHIIEVSVNAVPAHLENHGDCLINSTDRSLIETPCDPTDANGNDICDIQP
Ga0209382_115770091	3300027909	Populus Rhizosphere	MWRLMGVLLALTALVALATLHGTGYAQGNTQTREGKQLICHVSDDVGAHIIEVADPAVPKHLELHGDCLINSTNRALIGDPCDPTDGNNNDICDIQP
Ga0247685_10288381	3300028065	Soil	LSVSHAPVAAQPAADKQLICHVADESRTFIIEVAVPAVPAHLAHGDCLINSTDRDLIGDECDPTDANDNDICDVQP
Ga0268265_119618801	3300028380	Switchgrass Rhizosphere	MWRLTAVMLAIAALVGLTMFHGTVQAQPPGRPAAEKTMLCHVSDDNGAHIIEVADPAVPAHLANHGDCIINSDDRSLIGQPCDPTDANNNDICDIQP
Ga0268264_117570541	3300028381	Switchgrass Rhizosphere	MKRFLAVLFALVALAGLVLVHGTVHAQAGTPAADKQLICHVTDDSGAHIIEVALPAVPAHLREHGDCLINSKDRTLIGDDCNPTDANNDDVCDVQP
Ga0310886_103901811	3300031562	Soil	MWRLTAVVIAVAALVGLAMVHGTVQAQPPGRPAADKQLICHVTDDNGAHIIEVAEPAVPAHLRNHGDCIINSEDRSLIGDPCDPTDANNNDICDIQP
Ga0310904_113448661	3300031854	Soil	VLVAMLALAGLTMFHGTTKADPDPAKKQMVCHRDSVGAHLIYISNHAVPAHLRNHDDCLINSEDRTLVGQPCDPTDANDNDICDIQP
Ga0310892_112593952	3300031858	Soil	MWRLTAVVIAVAALVGLAMVHGTVQAQPPGRPAADKQLICHVTDDNGAHIIEVAEPAVPAHLRNHGDCIINSEDRSLIGEPCDPTDANDNDI
Ga0310900_111701972	3300031908	Soil	MWRLTAVVIAVAALVGLAMVHGTVQAQPPGRPAADKQLICHVTDDNGAHIIEVAEPAVPAHLRNHGDCIINSEDRSLIGEPCDPTDANDNDICDIQP
Ga0310884_110112871	3300031944	Soil	EVPMWRLTAVVIAVAALVGLAMVHGTVQAQPPGRPAADKQLICHVTDDNGAHIIEVAEPAVPAHLRNHGDCIINSEDRSLIGEPCDPTDANDNDICDIQP
Ga0316622_1009602382	3300033416	Soil	MYRLVGLFLACVAVVGISFTHGDLAAQPAADKQLICHVSPEEGDHIIEVALPAVNDHVERHGDCLIGSTDRTLIDQPCDASDADGDNNCDVQP
Ga0316630_105705172	3300033487	Soil	MYRLVGLFLACVAVVGISFTHGDLAAQPAADKQLVCHVSPEEGDHIIEVALPAVNDHVERHGDCLIGSTDRTLIDQPCDASDADGDNNCDVQP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F062200

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences