Metagenome / Metatranscriptome Family F062110

Basic Information
Family ID	F062110
Family Type	Metagenome / Metatranscriptome
Number of Sequences	131
Average Sequence Length	84 residues
Representative Sequence	MRTKRIDHGNDLVTLWHVGGASPCHGPALKVPAGFLEVEDPALPEGCELPDGSKLDAGAEPVCGTCGQHLGDDLGSELALSRGR
Number of Associated Samples	111
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	16.03 %
% of genes near scaffold ends (potentially truncated)	40.46 %
% of genes from short scaffolds (< 2000 bps)	83.21 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.64

Most Common Taxonomy
Group	Unclassified (59.542 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (9.924 % of family members)
Environment Ontology (ENVO)	Unclassified (28.244 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.092 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 8.04% β-sheet: 17.86% Coil/Unstructured: 74.11%
Feature Viewer

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Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF14031	D-ser_dehydrat	13.74
PF01564	Spermine_synth	7.63
PF01925	TauE	1.53
PF07690	MFS_1	1.53
PF01042	Ribonuc_L-PSP	1.53
PF14107	DUF4280	1.53
PF12244	DUF3606	1.53
PF00072	Response_reg	0.76
PF04172	LrgB	0.76
PF05726	Pirin_C	0.76
PF13561	adh_short_C2	0.76
PF04828	GFA	0.76
PF12973	Cupin_7	0.76
PF01554	MatE	0.76
PF02678	Pirin	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	1.53
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	1.53
COG1741	Redox-sensitive bicupin YhaK, pirin superfamily	General function prediction only [R]	1.53
COG1346	Putative effector of murein hydrolase	Cell wall/membrane/envelope biogenesis [M]	0.76
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.76

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.54 %
All Organisms	root	All Organisms	40.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.54 %
cellular organisms	root	All Organisms → cellular organisms	40.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.54 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	40.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.54 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	21.37 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.54 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	12.98 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.53 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.54 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	6.87 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.76 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.76 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.76 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.54 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	6.11 %
Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14	0.76 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.76 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.76 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.76 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.54 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	6.11 %
Magnetospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum	0.76 %
Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14	0.76 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.76 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.76 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.54 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	6.11 %
unclassified Magnetospirillum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum	0.76 %
Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14	0.76 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.76 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.76 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.54 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	6.11 %
Magnetospirillum sp. 64-120	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum → Magnetospirillum sp. 64-120	0.76 %
Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14	0.76 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.76 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.76 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_105848445	All Organisms → cellular organisms → Bacteria → Proteobacteria	2696	Open in IMG/M
3300000881\|JGI10215J12807_1029406	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14	3284	Open in IMG/M
3300000891\|JGI10214J12806_10973216	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300000891\|JGI10214J12806_11346501	Not Available	506	Open in IMG/M
3300000956\|JGI10216J12902_110271547	Not Available	601	Open in IMG/M
3300001686\|C688J18823_11007816	Not Available	528	Open in IMG/M
3300003267\|soilL1_10113996	All Organisms → cellular organisms → Bacteria	1259	Open in IMG/M
3300004081\|Ga0063454_101240847	Not Available	620	Open in IMG/M
3300004081\|Ga0063454_101328520	Not Available	604	Open in IMG/M
3300004463\|Ga0063356_101235496	All Organisms → cellular organisms → Bacteria → Proteobacteria	1088	Open in IMG/M
3300004463\|Ga0063356_102748498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum → Magnetospirillum sp. 64-120	757	Open in IMG/M
3300004479\|Ga0062595_100228031	Not Available	1184	Open in IMG/M
3300005093\|Ga0062594_100281667	Not Available	1247	Open in IMG/M
3300005163\|Ga0066823_10031159	All Organisms → cellular organisms → Bacteria	885	Open in IMG/M
3300005164\|Ga0066815_10020833	Not Available	915	Open in IMG/M
3300005165\|Ga0066869_10078503	Not Available	629	Open in IMG/M
3300005169\|Ga0066810_10108699	Not Available	623	Open in IMG/M
3300005294\|Ga0065705_10333018	Not Available	985	Open in IMG/M
3300005332\|Ga0066388_100197312	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2631	Open in IMG/M
3300005332\|Ga0066388_101247484	Not Available	1276	Open in IMG/M
3300005332\|Ga0066388_105579415	Not Available	637	Open in IMG/M
3300005438\|Ga0070701_11159493	Not Available	546	Open in IMG/M
3300005457\|Ga0070662_101639540	Not Available	555	Open in IMG/M
3300005468\|Ga0070707_101139556	Not Available	746	Open in IMG/M
3300005526\|Ga0073909_10067990	All Organisms → cellular organisms → Bacteria	1338	Open in IMG/M
3300005545\|Ga0070695_101854785	Not Available	506	Open in IMG/M
3300005546\|Ga0070696_100006343	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	7914	Open in IMG/M
3300005614\|Ga0068856_102130400	Not Available	570	Open in IMG/M
3300005616\|Ga0068852_100884267	Not Available	910	Open in IMG/M
3300005713\|Ga0066905_101844306	Not Available	558	Open in IMG/M
3300005841\|Ga0068863_100662577	All Organisms → cellular organisms → Bacteria	1036	Open in IMG/M
3300006046\|Ga0066652_100645188	Not Available	1003	Open in IMG/M
3300006049\|Ga0075417_10195324	Not Available	956	Open in IMG/M
3300006173\|Ga0070716_100369175	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300006173\|Ga0070716_100970070	Not Available	670	Open in IMG/M
3300006196\|Ga0075422_10447418	Not Available	579	Open in IMG/M
3300006358\|Ga0068871_101963390	Not Available	557	Open in IMG/M
3300006578\|Ga0074059_11897963	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300006579\|Ga0074054_12046171	Not Available	1107	Open in IMG/M
3300006581\|Ga0074048_13393869	Not Available	1127	Open in IMG/M
3300006605\|Ga0074057_12279841	Not Available	688	Open in IMG/M
3300006606\|Ga0074062_13011574	All Organisms → cellular organisms → Bacteria	1202	Open in IMG/M
3300006755\|Ga0079222_10063519	All Organisms → cellular organisms → Bacteria	1780	Open in IMG/M
3300006800\|Ga0066660_11447594	Not Available	539	Open in IMG/M
3300006845\|Ga0075421_101465148	Not Available	748	Open in IMG/M
3300006846\|Ga0075430_100140851	Not Available	2009	Open in IMG/M
3300006847\|Ga0075431_101776804	Not Available	573	Open in IMG/M
3300006853\|Ga0075420_100825231	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300006871\|Ga0075434_102092635	Not Available	571	Open in IMG/M
3300006914\|Ga0075436_101171685	Not Available	580	Open in IMG/M
3300006918\|Ga0079216_10816967	Not Available	688	Open in IMG/M
3300006953\|Ga0074063_10122828	All Organisms → cellular organisms → Bacteria	836	Open in IMG/M
3300007004\|Ga0079218_10058637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2436	Open in IMG/M
3300007004\|Ga0079218_10467596	Not Available	1102	Open in IMG/M
3300007255\|Ga0099791_10059697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1715	Open in IMG/M
3300009094\|Ga0111539_12421363	Not Available	609	Open in IMG/M
3300009156\|Ga0111538_12045453	Not Available	720	Open in IMG/M
3300009162\|Ga0075423_11464542	Not Available	732	Open in IMG/M
3300009176\|Ga0105242_12156844	Not Available	602	Open in IMG/M
3300009610\|Ga0105340_1017693	All Organisms → cellular organisms → Bacteria → Proteobacteria	2790	Open in IMG/M
3300010046\|Ga0126384_11523419	Not Available	627	Open in IMG/M
3300010047\|Ga0126382_12235297	Not Available	527	Open in IMG/M
3300010397\|Ga0134124_10003965	All Organisms → cellular organisms → Bacteria → Proteobacteria	11883	Open in IMG/M
3300010399\|Ga0134127_10040428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	3796	Open in IMG/M
3300010400\|Ga0134122_10288822	All Organisms → cellular organisms → Bacteria	1402	Open in IMG/M
3300010400\|Ga0134122_10423773	All Organisms → cellular organisms → Bacteria	1182	Open in IMG/M
3300011439\|Ga0137432_1304986	Not Available	509	Open in IMG/M
3300012212\|Ga0150985_112020699	Not Available	1281	Open in IMG/M
3300012232\|Ga0137435_1140760	Not Available	735	Open in IMG/M
3300012512\|Ga0157327_1032839	Not Available	657	Open in IMG/M
3300012948\|Ga0126375_10207041	Not Available	1293	Open in IMG/M
3300012948\|Ga0126375_10782783	Not Available	753	Open in IMG/M
3300012957\|Ga0164303_10706036	Not Available	680	Open in IMG/M
3300012957\|Ga0164303_11027009	Not Available	589	Open in IMG/M
3300012960\|Ga0164301_10574738	Not Available	827	Open in IMG/M
3300012961\|Ga0164302_11787241	Not Available	518	Open in IMG/M
3300012989\|Ga0164305_12203565	Not Available	507	Open in IMG/M
3300013297\|Ga0157378_10008164	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	9136	Open in IMG/M
3300015371\|Ga0132258_10326137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3787	Open in IMG/M
3300015371\|Ga0132258_11460646	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1727	Open in IMG/M
3300015372\|Ga0132256_103819458	Not Available	507	Open in IMG/M
3300015374\|Ga0132255_101031082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1235	Open in IMG/M
3300020202\|Ga0196964_10157238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1033	Open in IMG/M
3300021082\|Ga0210380_10061141	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1635	Open in IMG/M
3300024219\|Ga0247665_1002327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1930	Open in IMG/M
3300024224\|Ga0247673_1015417	All Organisms → cellular organisms → Bacteria	1001	Open in IMG/M
3300024224\|Ga0247673_1055012	Not Available	572	Open in IMG/M
3300024246\|Ga0247680_1056138	Not Available	573	Open in IMG/M
3300024246\|Ga0247680_1057218	Not Available	568	Open in IMG/M
3300024275\|Ga0247674_1024491	Not Available	703	Open in IMG/M
3300024284\|Ga0247671_1000774	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	8961	Open in IMG/M
3300025911\|Ga0207654_10237790	Not Available	1216	Open in IMG/M
3300025939\|Ga0207665_10969233	Not Available	676	Open in IMG/M
3300026078\|Ga0207702_11644626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	635	Open in IMG/M
3300026088\|Ga0207641_10057349	All Organisms → cellular organisms → Bacteria → Proteobacteria	3312	Open in IMG/M
3300027533\|Ga0208185_1006947	All Organisms → cellular organisms → Bacteria	2841	Open in IMG/M
3300027821\|Ga0209811_10003280	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	5274	Open in IMG/M
3300027886\|Ga0209486_10077022	Not Available	1726	Open in IMG/M
3300027886\|Ga0209486_10519914	Not Available	743	Open in IMG/M
3300027886\|Ga0209486_10649537	Not Available	675	Open in IMG/M
3300027907\|Ga0207428_10002310	All Organisms → cellular organisms → Bacteria → Proteobacteria	19091	Open in IMG/M
3300027909\|Ga0209382_11206139	Not Available	773	Open in IMG/M
3300028065\|Ga0247685_1000152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	7792	Open in IMG/M
3300028293\|Ga0247662_1052800	Not Available	709	Open in IMG/M
3300028380\|Ga0268265_10112048	All Organisms → cellular organisms → Bacteria	2230	Open in IMG/M
3300028592\|Ga0247822_10330221	All Organisms → cellular organisms → Bacteria → Proteobacteria	1173	Open in IMG/M
3300028792\|Ga0307504_10021612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1606	Open in IMG/M
3300028809\|Ga0247824_10958356	Not Available	538	Open in IMG/M
3300028812\|Ga0247825_10161228	All Organisms → cellular organisms → Bacteria → Proteobacteria	1541	Open in IMG/M
3300031152\|Ga0307501_10026045	All Organisms → cellular organisms → Bacteria	1156	Open in IMG/M
3300031198\|Ga0307500_10003405	All Organisms → cellular organisms → Bacteria	3687	Open in IMG/M
3300031199\|Ga0307495_10012879	All Organisms → cellular organisms → Bacteria	1271	Open in IMG/M
3300031226\|Ga0307497_10100993	Not Available	1124	Open in IMG/M
3300031226\|Ga0307497_10126978	All Organisms → cellular organisms → Bacteria	1030	Open in IMG/M
3300031547\|Ga0310887_10753186	Not Available	608	Open in IMG/M
3300031562\|Ga0310886_10100888	All Organisms → cellular organisms → Bacteria	1438	Open in IMG/M
3300031720\|Ga0307469_10115298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1928	Open in IMG/M
3300031720\|Ga0307469_12197967	Not Available	537	Open in IMG/M
3300031740\|Ga0307468_100048801	Not Available	2193	Open in IMG/M
3300031740\|Ga0307468_100300128	All Organisms → cellular organisms → Bacteria	1165	Open in IMG/M
3300031854\|Ga0310904_10621999	Not Available	739	Open in IMG/M
3300031892\|Ga0310893_10475281	Not Available	558	Open in IMG/M
3300032075\|Ga0310890_11042714	Not Available	660	Open in IMG/M
3300032180\|Ga0307471_100056594	All Organisms → cellular organisms → Bacteria → Proteobacteria	3277	Open in IMG/M
3300032180\|Ga0307471_101089140	Not Available	965	Open in IMG/M
3300033550\|Ga0247829_11251257	Not Available	615	Open in IMG/M
3300033551\|Ga0247830_10203483	All Organisms → cellular organisms → Bacteria	1479	Open in IMG/M
3300034417\|Ga0364941_003924	Not Available	2492	Open in IMG/M
3300034417\|Ga0364941_017884	All Organisms → cellular organisms → Bacteria	1415	Open in IMG/M
3300034659\|Ga0314780_161030	Not Available	561	Open in IMG/M
3300034664\|Ga0314786_165197	Not Available	528	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	75.57%
Host-Associated	Host-Associated	24.43%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	71.76%
Plants	Host-Associated → Plants	24.43%
Aquatic	Environmental → Aquatic	3.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	70.23%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.74%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.92%
Sediment	Environmental → Aquatic → Sediment	3.05%
Floodplain	Environmental → Terrestrial → Floodplain	1.53%
Freshwater	Environmental → Aquatic → Freshwater	0.76%
Roots	Host-Associated → Plants → Roots	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.21%
Loam	Environmental → Terrestrial → Soil → Loam	10.69%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.87%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.05%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.05%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.53%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.53%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.76%
Sand	Environmental → Terrestrial → Soil → Sand	0.76%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.21%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.45%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	9.16%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.87%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.34%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.34%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.05%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.05%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.05%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.29%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.53%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.53%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.76%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.76%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.76%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	9.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	9.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	5.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.34%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.34%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.58%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	3.05%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.05%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.05%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.05%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.29%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.29%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.29%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.29%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.53%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.53%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.53%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.76%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.76%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.76%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.76%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.76%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.76%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000881	Soil microbial communities from Great Prairies - Wisconsin Restored Prairie soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005164	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006578	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006579	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006605	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011439	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT820_2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012232	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT100_2	Environmental	Open in IMG/M
3300012512	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.3.old.270510	Host-Associated	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300020202	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_10	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300024219	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK06	Environmental	Open in IMG/M
3300024224	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK14	Environmental	Open in IMG/M
3300024246	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK21	Environmental	Open in IMG/M
3300024275	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK15	Environmental	Open in IMG/M
3300024284	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK12	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027533	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028065	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK26	Environmental	Open in IMG/M
3300028293	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK03	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034417	Sediment microbial communities from East River floodplain, Colorado, United States - 17_s17	Environmental	Open in IMG/M
3300034659	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034664	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1058484455	3300000364	Soil	MRLKRIDPALDLVTLWHVGGASPCRGPALKVPAGFLEVADPALPEGCELPDGSKLDAGAVPVCGTCGQHLGDDLGAELALSRGR*
JGI10215J12807_10294068	3300000881	Soil	MRTRRIDAAQAEDLVTLWHVGGESPCRGPALKVPPGFLESEEPALPEGCELPDGSKLKPGDPPVCGTCGQQLGSDLASQLALSRGRYRN*
JGI10214J12806_109732162	3300000891	Soil	MARSSNLRLKLAELAETDDLVTLWHVGGARPCQGPALKVPPDFLDAEEAVLPEGCELPDGSKLNPGDAVVCGTCGEALGSDLASQVALSRGRYRT*
JGI10214J12806_113465011	3300000891	Soil	VFLLPMRTKRIDHGNDLVTLWHVGGASPCHGPAIKVPAGFLEVEDPTLPEGCELPDGSKLDAGAEPVCGTCGQHLGDDLGSELALSRGR*
JGI10216J12902_1102715472	3300000956	Soil	MRTRRVDQGEELVPLWHVGGASPCNGPALKVPAVFLEVEDPALPEGCELPDGSKLDAGADPVCGTCGHHLGDDLGAELALSRGR*
C688J18823_110078162	3300001686	Soil	CVFLLPHMRFKRIDPAPDLVTLWHVGGASPCHGPALKVPSGFLDVEHPALPDGCELPDGSTLGAGAEPVCGTCGQHLGDDLGSELALSRGR*
soilL1_101139962	3300003267	Sugarcane Root And Bulk Soil	MRTRRSEKSELEDLVTLWHVGGAKPCHGPAVKVPPGFLSVQESVLPQGCEAPDGSKLAAGDPLVCGTCGESVAAGLASHLALSRERYRA*
Ga0063454_1012408472	3300004081	Soil	MRFKRMDPARDLVTLWHVGGASPCHGPALKVPSGFLDVDHPALPEGCELPDGSALGAGAEPVCGTCGQHLGADLGSELALSRGR*
Ga0063454_1013285201	3300004081	Soil	MRTKRIDHRGDLVTLWHVGGASPCQGPALKVPSGFLDAEHPALPDGCELPDGSTLGAGAEPVCGTCGQHLGDDLGSELALSRGR*
Ga0063356_1012354962	3300004463	Arabidopsis Thaliana Rhizosphere	MRAKRGEALQIEELVTLWHVGGAKPCRGPALMVPPDFLDAEETVLPQGCEGPDGSKLNAGDPLVCGTCGESLAQDLASQLALSRQRYRA*
Ga0063356_1027484982	3300004463	Arabidopsis Thaliana Rhizosphere	MARSSNMRLKLAELVETDDLVTLWHVGGNKPCHGPALKVPPGFLEAEEPALPEGCELPDGSKLKAGAVLVCGTCGESLGSDLASQVALSRGRHRT*
Ga0062595_1002280311	3300004479	Soil	MRTRRVDQGEELVTLWHVGGASPCNGPALKVPAVFLEVEDPALPEGCELPDGSKLDAGADPVCGTCGHHLGDDLGAELALSRGR*
Ga0062594_1002816672	3300005093	Soil	MRLKRIDPALELVTLWHVGGASPCRGPAIKVPAGFLEVEDPTLPEGCELPDGSKLDAGAAPVCGTCGQHLGDDLGSELALSRGR*
Ga0066823_100311591	3300005163	Soil	LPMRAKRIDHGNDLVTLWHVGGTSPCHGPAIKVPAGFLEVEDPTLPEGCELPDGSKLDAGAAPVCGTCGQHLGDDLGCELALSRGR*
Ga0066815_100208332	3300005164	Soil	MRTKRIDHGRDLVTLWHMGGASPCRGPALKVPAGFLEVEDPTLPEGCELPDGSKLDAGAAPVCGTCGQHLGDDLGCELALSRGR*
Ga0066869_100785032	3300005165	Soil	MRTKRIDHGNDLVTLWHVGGTSPCHGPALKVPAGFLEVEDPTLPEGCELPDGSKLDAGAEPVCGTCGQHLGDDLGSELALSRGR*
Ga0066810_101086992	3300005169	Soil	ACVFLLPMRAKRIDQGNDLVTLWHVGGASPCHGPALKVPAGFLEVEDPALPEGCELPDGSKLDAGAEPVCGTCGQHLGDDLGSELALSRGR*
Ga0065705_103330182	3300005294	Switchgrass Rhizosphere	MRLKRIDPALDLVTLWHVGGASPCQGPAIKVPAGFLEVEDPTLPDGCELPDGSKLDAGAAPVCGTCGQHLGDDLGSELALSRGR*
Ga0066388_1001973124	3300005332	Tropical Forest Soil	MRTKRTDLLPAEELLTLWHVGGASPCHGPALKVPPAFLDAEETVLPPGCESPDGSKLNEGDPLMCGTCGQDFGDDPVSQLALSRGRYR*
Ga0066388_1012474844	3300005332	Tropical Forest Soil	MRLKRIDPALDLVTLWHVGGASPCQGPALKVPAGFLEVEDPTLPEGCEHPDGSKLDAGAAPVCGTCGHHLGDDLGSELALSRGR*
Ga0066388_1055794152	3300005332	Tropical Forest Soil	MRTRRIEGNDLVTLWHVGGASPCHGPALKVPAVFLEVEDPALPEGCELPDGSKLHAGADPVCGTCGQHLGDNLGAELALSRGR*
Ga0070701_111594931	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MRTRRVDQGEELVTLWHVGGASPCNGPALKVPAVFLEVEDPALPEGCELPDGSKLDAGADPVCGTCGHHLGDDLGAELALS
Ga0070662_1016395401	3300005457	Corn Rhizosphere	MRLKRIDPALELVTLWHVGGASPCRGPAIKVPAGFLEVEDPTLPDGCEHPDGSKLDAGAAPVCGTCGQHLGDDLGSELALSRG
Ga0070707_1011395561	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	CVFLLSHMRLKRIDPALELVTLWHVGGASPCRGPAIKVPAGFLEVEDPTLPEGCELPDGSKLDAGAAPVCGTCGQHLGDDLGSELALSRGR*
Ga0073909_100679902	3300005526	Surface Soil	MRTKRIDHGNDLVTLWHVGGTSPCHGPAIKVPAGFLEVEDPTLPEGCELPDGSKFDAGAEPVCGTCGQHLGDDLGSELALSRGR*
Ga0070695_1018547852	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MRTRRVDQGEELVTLWHVGGASPCNGPALKVPAVFLEVEDPALPEGCELPDGSKLDAGADPVCGTCGHHLGDDLGAELA
Ga0070696_1000063433	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MARSSNMRLKLAELVDTDDLVTLWHVGGERPCQGPALKVPPGFLDAEELALPEGCELPDGSKLKPGAAPVCGTCGETLGSDLASQVALSRGRNRT*
Ga0068856_1021304001	3300005614	Corn Rhizosphere	RACVFLLPNMRTRRVDQGEELVTLWHVGGASPCNGPALKVPAVFLEVEDPALPEGCELPDGSKLDAGADPVCGTCGHHLGDDLGAELALSRGR*
Ga0068852_1008842672	3300005616	Corn Rhizosphere	MRLKRIDPALELVTLWHVGGASPCRGPAIKVPAGFLEVEDPTLPEGCELPDGSKLDAGAAPVCGTCGQHLGDDLGSELAL
Ga0066905_1018443062	3300005713	Tropical Forest Soil	MHKKRMEVIRTEDLVTLWHVGGESPCQGPALKVPPVFLDTAEPALPDGCELPDGSKLNAGDPLVCGTCGQNLENDPSQLSLSRGRYR*
Ga0068863_1006625773	3300005841	Switchgrass Rhizosphere	MRAKRIDHGNDLVTLWHVGGMSPCHGPAIKVPAGFLEVEDPTLPEGCELPDGSKLDAGAEPVCGTCGQHLGDDLGSELALSRGR*
Ga0066652_1006451884	3300006046	Soil	MRTKRIEQGNDLVTLWHVGGTSACHGPAIKVPAGFLEVEDPKLPEGCERPDGSRLDVGAEPVCGTCGQHLGDDLGSELALSRGR*
Ga0075417_101953242	3300006049	Populus Rhizosphere	MRLKRIDPALDLVTLWHVGGASPCQGPAIKVPAGFLEVEDPTLPEGCERPDGSKLDAGAAPVCGTCGQHLGDDLGSELALSRGR*
Ga0070716_1003691753	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MRMRRVDQGEELVTLWHVGGASPCNGPALKVPAVFLEVEDPALPEGCELPDGSKLDAGADAVCGTCGQHLGDDLGAELALSRGR*
Ga0070716_1009700701	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	RIDPALELVTLWHVGGASPCRGPAIKVPAGFLEVEDPTLPEGCELPDGSKLDAGAAPVCGTCGQHLGDDLGSELALSRGR*
Ga0075422_104474181	3300006196	Populus Rhizosphere	MRLKRIDPALDLVTLWHVGGTSPCQGPAIKVPAGFLEVEDPKLPEGCELPDGSKLDAGAAPVCGTCGQHLGDDLGSELALSRGR*
Ga0068871_1019633902	3300006358	Miscanthus Rhizosphere	WHVGGASPCNGPALKVPAVFLEVEDPALPEGCELPDGSKLDAGADPVCGTCGHHLGDDLGAELALSRGR*
Ga0074059_118979631	3300006578	Soil	MRTKRIDHGNDLVTLWHVGGTSPCHGPALKVPAGFLEVEDPTLPEGCELPDGSKLDAGAEPVCGTCGQHL
Ga0074054_120461713	3300006579	Soil	MRTKRIDHGRDLVTLWHMGGASPCRGPALKVPAGFLEVEDPTLPEGCELPDGSKLDAGAAPVCGTCGQHLGDDLGSELALSRGR*
Ga0074048_133938692	3300006581	Soil	MRTKRIDHGNDLVTLWHVGGASPCHGPALKVPAGFLEVEDPALPEGCELPDGSKLDAGAEPVCGTCGQHLGDDLGSELALSRGR*
Ga0074057_122798411	3300006605	Soil	PMRTKRSDHGRDLVTLWHMGGASPCRGPALKVPAGFLEVEDPTLPEGCELPDGSKLDAGAEPVCGTCGQHLRDDLGSELALSRGR*
Ga0074062_130115741	3300006606	Soil	IGFLKCTRACVFLLPMRTKRIDHGRDLVTLWHIGGASPCRGPALKVPAGFLEVEDPTLPEGCELPDGSKLDAGAAPVCGTCGQHLGDDLGSELALSRGR*
Ga0079222_100635192	3300006755	Agricultural Soil	MRTRRVDQGEELVTLWHVGGASPCNGPALKVPAVFLEVEDPALPEGCELPDGSKLHAGADPVCGTCGHHLGDDLGAELALSRGR*
Ga0066660_114475941	3300006800	Soil	ADWFLKCRRGYVFLSPDMRTKRIDHGADLVTLWHVGGASPCHGPALKVPSGFLGVEDPALPQGCELPDGSKLDAGAAPVCGTCGQHLGDDLGAELALSRGR*
Ga0075421_1014651482	3300006845	Populus Rhizosphere	MRIKRIEPARNEDLVTLWHVGGERPCQGPALKVPPGFLESEDTVLPEGCELPDGSKLNAGDAMVCGTCGQKVGEDPGSQLALSRGRYR*
Ga0075430_1001408511	3300006846	Populus Rhizosphere	MRLKRIDPALDLVTLWHVGGASPCQGPAIKVPAGFLEVEDPTLPEGCERPDGSKLDAGAAPVCGTCGQHLGDELGSELALSRGR*
Ga0075431_1017768042	3300006847	Populus Rhizosphere	MRLKRIDPALDLVTLWHVGGASPCQGPAIKVPAGFLEVEDPTLPEGCERPDGSKLDAGAAPVCGTCGQHLGDDLGSELALSR
Ga0075420_1008252313	3300006853	Populus Rhizosphere	TDDLVTLWHVGGDRPCRGPALKVPPGFLDAEEPVLPEGCELPDGSKLKAGAALVCGTCGESLGSDLASQVALSRGRHRS*
Ga0075434_1020926352	3300006871	Populus Rhizosphere	MRLKRIDPALDLVTLWHVGGASPCQGPAIKVPAGFLEVEDPTLPEGCERPDGSKLDAGAAPVCGTCGQHLGDDLGSEL
Ga0075436_1011716852	3300006914	Populus Rhizosphere	MRMRRFDHGEELVTLWHVGGASPCNGPALKVPAVFLEVEDPALPEGCEHPDGSKLDAGADPVCGTCGQHLGDDLGAELALSRGR*
Ga0079216_108169672	3300006918	Agricultural Soil	MSVMRAKRINLADPEELVTLWHVGGSRPCQGPALKVPPEFLETDAAALPEGCEMPDGSKLAPGDTPVCGTCGERLGTDLAEQLALSRERYRS*
Ga0074063_101228283	3300006953	Soil	ACVFLLPMRTKRIDHGRDLVTLWHIGGASPCRGPALKVPAGFLEVEDPTLPEGCELPDGSKLDAGAAPVCGTCGQHLGDDLGSELALSRGR*
Ga0079218_100586373	3300007004	Agricultural Soil	MRAKRIELADTEDLVTLWHVGGQKPCQGPALKVPPEFLETEEAGLPEGCELPDGSKLKSDEPLACGTCGERLARDLASQLALSRERYRT*
Ga0079218_104675962	3300007004	Agricultural Soil	MSARSPALRAKRLELADTEDLVTLWHVGGEKPCQGPALKVPPEFLDTDEAALPEGCEFPDGSKLRSGEPLVCGTCGHHLAENLASQLALSRERYRS*
Ga0099791_100596973	3300007255	Vadose Zone Soil	MRTKRIDHGGDLVTLWHVGGASPCRGPALKVPAGFLEVEDPTLPEGCELPDGSKLDAGAEPVCGTCGQHLGDDLGSELALSRGR*
Ga0111539_124213632	3300009094	Populus Rhizosphere	MRLKRIDPALDLVTLWHVGGASPCRGPAIKVPAGFLEVEDPTLPEGCELPDGSKLGAGAEPVCGTCGQHLGGDLGSELALSRGR*
Ga0111538_120454531	3300009156	Populus Rhizosphere	MRLKRIDPALDLVTLWHVGGASPCQGPAIKVPAGFLEVEDPTLPEGCELPDGSKLDAGAEPVCGTCGQHLAGDLGSELALSRGR*
Ga0075423_114645421	3300009162	Populus Rhizosphere	MRLKRIDPALDLVTLWHVGGASPCRGPAIKVPAGFLEVEDPTLPEGCELPDGSKLDAGAAPVCGTCGQHLGDDLGSELA
Ga0105242_121568442	3300009176	Miscanthus Rhizosphere	MRRVDHGEELVTLWHVGGASPCNGPALKVPAVFLEVEDPALPEGCELPDGSKLDAGADPVCGTCGHHLGDDLGAELALSRGR*
Ga0105340_10176935	3300009610	Soil	LTLWHVGGASPCHGPALKVPPAFMDAEEALLPAGCELPDGSKLNAGDPLVCGTCGHSLGSDPASELALSRGRYC*
Ga0126384_115234191	3300010046	Tropical Forest Soil	MRRVDHGEELVTLWHVGGASPCNGPALKVPAVFLEVADPALPEGCELPDGSKLDAGADPVCGTCGHHLGVDLAAELAL
Ga0126382_122352971	3300010047	Tropical Forest Soil	MRTRRIEGNDLVTLWHVGGASPCNGPALKVPAVFLEVEDPALPEGCELPDGSKLDAGADPVCGTCGQHLGEDLGAELALSRGR*
Ga0134124_100039653	3300010397	Terrestrial Soil	MRLKRIDPALDLVTLWHVGGTSPCQGPAIKVPAGFLEVEDPALPEGCELPDGSKLDAGAAPVCGTCGQHLGDDLGSELALSRGR*
Ga0134127_100404285	3300010399	Terrestrial Soil	RQAGVCIETRPGLCFALGRSMRTKRIDAARAEDLVTLWHVGGESPCRGPALKVPPGFLESEEPALPEGCELPDGSKLKPGDPPVCGTCGQQLGSDLASQLALSRGRYRN*
Ga0134122_102888223	3300010400	Terrestrial Soil	MRAKRIDHGNDLVTLWHVGGASPCHGPALKVPAGFLEVEDPALPEGCELPDGSKLDAGAEPVCGTCGQHLGEDLGSELALSRGR*
Ga0134122_104237732	3300010400	Terrestrial Soil	MARSSNMRLKLAELVDTDDLVTLWHVGGERPCQGPALKVPPGFLDAEEPALPEGCELPDGSKLKPGAAPVCGTCGETLGSDLASQVALSRGRNRT*
Ga0137432_13049862	3300011439	Soil	LTLWHVGGASPCHGPALKVPPAFMDAEEAVLPAGCELPDGSKLNAGDPLVCGTCGESLGSDPASELALSRGRYR*
Ga0150985_1120206991	3300012212	Avena Fatua Rhizosphere	MRTRRIDHGNDLVTLWHVGGTSPCHGPAIKVPAGFLEVEDPKLPEGCELPDGSRLDVGAEPVCGTCGQHLGDDLGSELALSRGR*
Ga0137435_11407602	3300012232	Soil	MRTKRIDHGNDLVTLWHVGGASPCHGPALKVPAVFLEVEDPTLPEGCELPDGSKLVAGAEPVCGTCGQHLGDDLGCELALSRGR*
Ga0157327_10328393	3300012512	Arabidopsis Rhizosphere	MRLKRIDPALDLVTLWHVGGASPCQGPAIKVPAGFLEVEDPTLPEGCELPDGSKLDAGAEPVCGTCGQH
Ga0126375_102070413	3300012948	Tropical Forest Soil	MRIKRTDLLPAEELLTLWHVGGASPCHGPALKVPPAFLDAEETVLPPGCESPDGSKLNEGDPLMCGTCGQDFGDDPVSQLALSRGRYR*
Ga0126375_107827832	3300012948	Tropical Forest Soil	MRTRRIEGNDLVTLWHVGGASPCHGPALKVPAVFLEVEDPALPEGCELPDGSKLDAGTDPVCGTCGQHLGDDLGAELALSWGR*
Ga0164303_107060362	3300012957	Soil	MRTKRIDHGNDLVTLWHVGGTSPCHGPAIKVPAGFLEVEDPTLPEGCELPDGSKLDAGAAPVCGTCGQHLGDDLGSELALSRGR*
Ga0164303_110270092	3300012957	Soil	MRAKRIDHGNDLVTLWHVGGASPCHGPALKVPAGFLEVEDPALPEGCELPDGSKLDAGAEPVCGTCGQHLGDDLGSELALSRGR*
Ga0164301_105747382	3300012960	Soil	MRTKRIDHGNDLVTLWHVGGTSPCHGPAIKVPAGFLEVEDPTLPEGCELPDGSKLDAGAEPVCGTCGQHLGDDLGSELALSRGR*
Ga0164302_117872412	3300012961	Soil	MRAKRIDHGNDLVTLWHVGGTSPCHGPAIKVPAGFLEVEDPTLPEGCELPDGSKLDAGAAPVCGTCGQHLGDDLGSELALSRGR*
Ga0164305_122035651	3300012989	Soil	MRAKRIDHGNDLVTLWHVGGTSPCHGPAIKVPAGFLEVEDPTLPEGCELPDGSKFDAGAEPVCGTCGQHLGDDLGSELALSRGR*
Ga0157378_100081641	3300013297	Miscanthus Rhizosphere	MRLKRIDPALELVTLWHVGGASPCRGPAIKVPAGFLEVEDPTLPEGCELPDGSKLDAGAAPVCGTCGHHLGDDLGSELALSRGR*
Ga0132258_103261376	3300015371	Arabidopsis Rhizosphere	LDLVTLWHVGGASPCQGPAIKVPAGFLEVEDPTLPDGCELPDGSKLDAGAAPVCGTCGQHLGDDLGSELALSRGR*
Ga0132258_114606463	3300015371	Arabidopsis Rhizosphere	MRTRRVDHGEELVTLWHVGGASPCNGPALKVPAVFLEVEDPALPEGCELPDGSKLDAGADPVCGTCGHHLGGDLGAELALSRGR*
Ga0132256_1038194581	3300015372	Arabidopsis Rhizosphere	LLSHMRLKRIDPALDLVTLWHVGGTSPCQGPAIKVPAGFLEVEDPALPEGCELPDGSKLDAGAAPVCGTCGQHLGDDLGSELALSKGR*
Ga0132255_1010310821	3300015374	Arabidopsis Rhizosphere	LWHVGGTSPCQGPAIKVPAGVLEVEDPALPEGCELPDGSKLDAGAAPVCGTCGQHLGDDLGSELALSRGR*
Ga0196964_101572382	3300020202	Soil	MRTKRIDPTPSEDLVTLWHVGGAKPCHGPALKVPPEFVDAEEVPLAQNCELPDGSKLNPGDPLVCGTCGERLAADLASELSLSRERYRT
Ga0210380_100611414	3300021082	Groundwater Sediment	HMGGASPCHGPAIKVPAGFLEVEDPTLPEGCELPDGSKLDAGAEPVCGTCGQHLGDDLGCELALSRGR
Ga0247665_10023271	3300024219	Soil	LWHVGGASPCRGPAIKVPAGFLEVEDPTLPEGCELPDGSKLDAGAAPVCGTCGQHLGDDLGSELALSRGR
Ga0247673_10154171	3300024224	Soil	TRACVFLLPTMRTRRVDQGEELVTLWHVGGASPCNGPALKVPAVFLEVEDPALPEGCELPDGSKLDAGADPVCGTCGHHLGDDLGAELALSRGR
Ga0247673_10550121	3300024224	Soil	ARIGFLKCTRACVFLLPTMRIRRVDQGEELVTLWHVGGASPCNGPALKVPAVFLEVEDPALPEGCELPDGSKLDAGANPVCGTCGHHLGDDLGAELALSRGR
Ga0247680_10561382	3300024246	Soil	MRTRRVDQGEELVTLWHVGGASPCNGPALKVPAVFLEVEDPALPEGCELPDGSKLDAGADPVCGTCGHHLGDDLGAPWTAP
Ga0247680_10572181	3300024246	Soil	MRIRRVDQGEELVTLWHVGGASPCNGPALKVPAVFLEVEDPALPEGCELPDGSKLDAGANPVCGTCGHHLGDDLGAELALSRGR
Ga0247674_10244913	3300024275	Soil	MRTRRVDQGEELVTLWHVGGASPCNGPALKVPAVFLEVEDPALPEGCELPDGSKLDAGADPVCGTCGHHLGDD
Ga0247671_100077411	3300024284	Soil	NMRTRRVDQGEELVTLWHVGGASPCNGPALKVPAVFLEVEDPALPEGCELPDGSKLDAGADPVCGTCGHHLGDDLGAELALSRGR
Ga0207654_102377904	3300025911	Corn Rhizosphere	MRLKRIDPALELVTLWHVGGASPCRGPAIKVPAGFLEVEDPTLPEGCELPDGSKLDAGAAPVCGTCGQHLGDDLGSELA
Ga0207665_109692332	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	RIDPALELVTLWHVGGASPCRGPAIKVPAGFLEVEDPTLPEGCELPDGSKLDAGAAPVCGTCGQHLGDDLGSELALSRGR
Ga0207702_116446262	3300026078	Corn Rhizosphere	VDRRVDQGEELVTLWHVGGASPCNGPALKVPAVFLEVEDPALPEGCELPDGSKLDAGADPVCGTCGHHLGDDLGAELALSRGR
Ga0207641_100573493	3300026088	Switchgrass Rhizosphere	MRAKRIDHGNDLVTLWHVGGMSPCHGPAIKVPAGFLEVEDPTLPEGCELPDGSKLDAGAEPVCGTCGQHLGDDLGSELALSRGR
Ga0208185_10069474	3300027533	Soil	LTLWHVGGASPCHGPALKVPPAFMDAEEALLPAGCELPDGSKLNAGDPLVCGTCGHSLGSDPASELALSRGRYC
Ga0209811_100032805	3300027821	Surface Soil	MRTKRIDHGNDLVTLWHVGGTSPCHGPAIKVPAGFLEVEDPTLPEGCELPDGSKFDAGAEPVCGTCGQHLGDDLGSELALSRGR
Ga0209486_100770223	3300027886	Agricultural Soil	MRAKRIELADTEDLVTLWHVGGQKPCQGPALKVPPEFLETEEAGLPEGCELPDGSKLKSDEPLACGTCGERLARDLASQLALSRERYRT
Ga0209486_105199141	3300027886	Agricultural Soil	MSARSPALRAKRLELADTEDLVTLWHVGGEKPCQGPALKVPPEFLDTDEAALPEGCEFPDGSKLRSGEPLVCGTCGRHLA
Ga0209486_106495372	3300027886	Agricultural Soil	MSVMRAKRINLADPEELVTLWHVGGSRPCQGPALKVPPEFLETDAAALPEGCEMPDGSKLAPGDTPVCGTCGERLGTDLAEQLALSRERYRS
Ga0207428_100023101	3300027907	Populus Rhizosphere	MRLKRIDPALDLVTLWHVGGASPCQGPAIKVPAGFLEVEDPTLPEGCERPDGSKLDAGAAPVCGTCGQHLGDDLGSELALSRG
Ga0209382_112061392	3300027909	Populus Rhizosphere	MRIKRIEPARNEDLVTLWHVGGERPCQGPALKVPPGFLESEDTVLPEGCELPDGSKLNAGDAMVCGTCGQKVGEDPGSQLALSRGRYR
Ga0247685_10001521	3300028065	Soil	LLPNMRTRRVDQGEELVTLWHVGGASPCNGPALKVPAVFLEVEDPALPEGCELPDGSKLDAGADPVCGTCGHHLGDDLGAELALSRGR
Ga0247662_10528001	3300028293	Soil	MRTRRVDQGEELVTLWHVGGASPCNGPALKVPAVFLEVEDPALPEGCELPDGSKLDAGADPVCGTCGHHLGDDLGAELALSR
Ga0268265_101120485	3300028380	Switchgrass Rhizosphere	MRTRRVDQGEELVTLWHVGGASPCNGPALKVPAVFLEVEDPALPEGCELPDGSKLDAGANPVCGTCGQHLGDDLGAELALSRGR
Ga0247822_103302212	3300028592	Soil	LTLWHVGGASPCHGPALKVPPAFMDAEEALLPPGCELPDGSKLNEGDPLVCGTCGQNVGEDPGSQLALSRGRYR
Ga0307504_100216121	3300028792	Soil	RVFSFTSMRLKRIDAALELVTLWHVGGASPCRGPAIKVPAGFLEVEDPALPEGCELPDGSKLDAGAAPVCGTCGQHLGDDLGAELALSRGR
Ga0247824_109583561	3300028809	Soil	TLWHVGGASPCHGPALKVPPAFMDAEEALLPPGCELPDGSKLDAGHPLVCGTCGESLGSDPASALALSRGRYR
Ga0247825_101612282	3300028812	Soil	MRAKRGEALQIEELVTLWHVGGAKPCRGPALKVPPGFLDAEETVLPQGCEAPDGSKLNAGDPLVCGTCGESLAQDLASQLALSRERYRA
Ga0307501_100260452	3300031152	Soil	MRMKRIDHGGDLVTLWHMGGASPCHGPAIKVPAGFLEVEDPTLPEGCELPDGSKLDAGAAPVCGTCGQHLGDDLGSELALSRGR
Ga0307500_100034053	3300031198	Soil	MRTKRIDHGGDLVTLWHMGGASPCRGPALKVPAGFLEVEDPTLPEGCELPDGSKLDAGAAPVCGTCGQHFGDDLGSELALSRGR
Ga0307495_100128792	3300031199	Soil	MRTKRIDHGADLVTLWHVGGASPCHGPALKVPSGFLGIEDPALPQGCELPDGSKLDAGAAPVCGTCGQHLGDALGAELALSRGR
Ga0307497_101009933	3300031226	Soil	MRAKRIDHGGDLVTLWHVGGASPCHGPALKVPAVFLEVEDPTLPAGCELPDGSKLDAGADPVCGTCGQHLGDDLGSELALSRGR
Ga0307497_101269783	3300031226	Soil	MRLKRIDPALDLVTLWHVGGVSPCQGPALKVPSGFLEVEDPALPEGCELPDGSRLDAGAAPVCGTCGQHLGDDLGAELALSRGR
Ga0310887_107531861	3300031547	Soil	VTLWHVGGASPCQGPALKVPPGLLDTEEPALPAGCELPDGSRLNAGDPLVCGTCGQSLENDPASQLALSRGRYR
Ga0310886_101008883	3300031562	Soil	MRLKRIDPALDLVTLWHVGGASPCQGPAIKVPAGFLEVEDPTLPDGCELPDGSKLDAGAAPVCGTCGQHLGDDLGSELALSRGR
Ga0307469_101152983	3300031720	Hardwood Forest Soil	MRLKRIDPALDLVTLWHVGGASPCRGPAIKVPAGFLEVDDPTLPEGCELPDGSKLDAGAAPVCGTCGQHLGDDLGSKLALSRGR
Ga0307469_121979672	3300031720	Hardwood Forest Soil	CVFLLSHMRLKRIDPALDLVTLWHVGGASPCRGPAIKVPAGFLEVEDPKLPEGCELPDGSKLDAGAAPVCGTCGQHLGDDLGSELALSRGR
Ga0307468_1000488012	3300031740	Hardwood Forest Soil	LTLWHVGGASPCHGPALKVPPAFMDAEESVLPAGCELPDGSKLNAGDPLVCGTCGENLGSDPASALALSRGRYR
Ga0307468_1003001282	3300031740	Hardwood Forest Soil	MRTKRIDHGGDLVTLWHMGGASPCRGPALKVPAGFLEVEDPTLPEGCELPDGSKLDAGAEPVCGTCGQHLGDDLGSELALSRGR
Ga0310904_106219992	3300031854	Soil	ACVFLLSHMRLKRIDPALDLVTLWHVGGASPCQGPAIKVPAGFLEVEDPTLPDGCELPDGSKLDAGAAPVCGTCGQHLGDDLGSELALSRGR
Ga0310893_104752812	3300031892	Soil	KCAPSCVFLLSHMRLKRIDPALELVTLWHVGGASPCRGPAIKVPAGFLEVEDPTLPDGCELPDGSKLDAGAAPVCGTCGQHLGDDLGSELALSRGR
Ga0310890_110427142	3300032075	Soil	RPGLCFALGRSMRTKRIDAAQAEDLVTLWHVGGESPCRGPALKVPPGFLESEEPALPVGCELPDGSKLKPGDPPVCGTCGQQLGSDLASQLALSRGRYRN
Ga0307471_1000565943	3300032180	Hardwood Forest Soil	MRLKRIDPALDLVTLWHVGGASPCRGPAIKVPAGFLEVVDPTLPEGCELPDGSKLDAGAAPVCGTCGQHLGDDLGSKLALSRGR
Ga0307471_1010891402	3300032180	Hardwood Forest Soil	MDLSPAEELLTLWHVGGASPCHGPALKVPPAFMDAEESVLPAGCELPDGSKLNAGDPLVCGTCGESLGSDPASELALSRGRYR
Ga0247829_112512571	3300033550	Soil	MRTKRIDHGNDLVTLWHVGGTSPCHGPAIKVPAGFLEVEDPTLPEGCELPDGSKLDAGAAPVCGTCGQHLGDD
Ga0247830_102034831	3300033551	Soil	TLWHVGGASPCHGPALKVPPAFMDAEEALLPPGCELPDGSKLNEGDPLVCGTCGQNVGEDPGSQLALSRGRYR
Ga0364941_003924_417_641	3300034417	Sediment	MTLWHVGGASPCHGPALKVPPAFMDAEEALLPAGCELPDGSKLNAGDPLVCGTCGHSLGSDPASELALSRGRYC
Ga0364941_017884_683_937	3300034417	Sediment	MRTKRIDHGRDLVTLWHMGGASPCHGPAIKVPAGFLEVEDPTLPEGCELPDGSKLDAGAEPVCGTCGQHLGDDLGCELALSRGR
Ga0314780_161030_2_247	3300034659	Soil	KRIDPALDLVTLWHVGGASPCQGPAIKVPAGFLEVEDPTLPDGCELPDGSKLDAGAAPVCGTCGQHLGDDLGSELALSRGR
Ga0314786_165197_3_233	3300034664	Soil	ALDLVTLWHVGGASPCQGPAIKVPAGFLEVEDPTLPEGCELPDGSKLDAGAAPVCGTCGQHLGDDLGSELALSRGR

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.64
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.64
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F062110

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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