Metagenome / Metatranscriptome Family F062046

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F062046
Family Type	Metagenome / Metatranscriptome
Number of Sequences	131
Average Sequence Length	63 residues
Representative Sequence	MTDEQGQAIRNELKRFAGDLNLSDEQKTKLHERMAFAAGRLHEYKKSHPDVTRQDIIKA
Number of Associated Samples	90
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	90.84 %
% of genes near scaffold ends (potentially truncated)	99.24 %
% of genes from short scaffolds (< 2000 bps)	96.18 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.237 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (24.427 % of family members)
Environment Ontology (ENVO)	Unclassified (37.405 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.725 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.02% β-sheet: 0.00% Coil/Unstructured: 45.98%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF14023	DUF4239	3.05
PF00011	HSP20	2.29
PF04226	Transgly_assoc	1.53
PF03544	TonB_C	1.53
PF14534	DUF4440	1.53
PF07992	Pyr_redox_2	0.76
PF03279	Lip_A_acyltrans	0.76
PF13432	TPR_16	0.76
PF00583	Acetyltransf_1	0.76
PF00034	Cytochrom_C	0.76
PF02796	HTH_7	0.76
PF12681	Glyoxalase_2	0.76
PF12706	Lactamase_B_2	0.76
PF06742	DUF1214	0.76
PF00999	Na_H_Exchanger	0.76
PF02780	Transketolase_C	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	2.29
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	1.53
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	1.53
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	0.76
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	0.76
COG1560	Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)	Lipid transport and metabolism [I]	0.76
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	0.76
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	0.76
COG4261	Predicted acyltransferase, LPLAT superfamily	General function prediction only [R]	0.76
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	0.76
COG5361	Uncharacterized conserved protein	Mobilome: prophages, transposons [X]	0.76
COG5402	Uncharacterized protein, contains DUF1214 domain	Function unknown [S]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.24 %
Unclassified	root	N/A	0.76 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.24 %
Unclassified	root	N/A	0.76 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.24 %
Unclassified	root	N/A	0.76 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	79.39 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	4.58 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.29 %
Unclassified	root	N/A	0.76 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	79.39 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4.58 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.53 %
Unclassified	root	N/A	0.76 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	70.23 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	4.58 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	1.53 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.76 %
Unclassified	root	N/A	0.76 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	70.23 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4.58 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1.53 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.76 %
Unclassified	root	N/A	0.76 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	70.23 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	3.05 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	1.53 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1.53 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.76 %
Unclassified	root	N/A	0.76 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	70.23 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	3.05 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	1.53 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1.53 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.76 %
Unclassified	root	N/A	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459003\|FZN2CUW02GGIMN	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	529	Open in IMG/M
2170459003\|FZN2CUW02GQ19S	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	526	Open in IMG/M
2170459006\|GBPF9FW02JTEEX	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	528	Open in IMG/M
2170459009\|GA8DASG01ADR7U	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	556	Open in IMG/M
2170459023\|GZGNO2B02FR239	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	559	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10138555	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	589	Open in IMG/M
3300000893\|AP72_2010_repI_A001DRAFT_1008135	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1901	Open in IMG/M
3300005171\|Ga0066677_10375346	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	814	Open in IMG/M
3300005294\|Ga0065705_11008633	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300005329\|Ga0070683_100068185	All Organisms → cellular organisms → Bacteria → Proteobacteria	3314	Open in IMG/M
3300005330\|Ga0070690_100756264	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300005332\|Ga0066388_102263902	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	982	Open in IMG/M
3300005332\|Ga0066388_103082357	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	851	Open in IMG/M
3300005332\|Ga0066388_108574113	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	509	Open in IMG/M
3300005356\|Ga0070674_101815277	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	553	Open in IMG/M
3300005366\|Ga0070659_101011276	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300005434\|Ga0070709_10185239	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1465	Open in IMG/M
3300005434\|Ga0070709_11192221	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	612	Open in IMG/M
3300005556\|Ga0066707_10034225	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2843	Open in IMG/M
3300005556\|Ga0066707_10150105	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1476	Open in IMG/M
3300005764\|Ga0066903_100271710	All Organisms → cellular organisms → Bacteria	2645	Open in IMG/M
3300005764\|Ga0066903_100542755	All Organisms → cellular organisms → Bacteria	1990	Open in IMG/M
3300005764\|Ga0066903_101348298	All Organisms → cellular organisms → Bacteria	1336	Open in IMG/M
3300005764\|Ga0066903_104442324	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300005764\|Ga0066903_106573981	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	605	Open in IMG/M
3300006058\|Ga0075432_10316507	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	652	Open in IMG/M
3300006175\|Ga0070712_100734104	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	844	Open in IMG/M
3300006796\|Ga0066665_10842284	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	718	Open in IMG/M
3300006854\|Ga0075425_102005016	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	647	Open in IMG/M
3300006880\|Ga0075429_101602615	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300006914\|Ga0075436_101567901	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	501	Open in IMG/M
3300009012\|Ga0066710_100606161	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1661	Open in IMG/M
3300009094\|Ga0111539_10762749	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1126	Open in IMG/M
3300009162\|Ga0075423_10768620	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1019	Open in IMG/M
3300010048\|Ga0126373_10999136	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	902	Open in IMG/M
3300010323\|Ga0134086_10268438	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	654	Open in IMG/M
3300010359\|Ga0126376_11608456	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	682	Open in IMG/M
3300010359\|Ga0126376_12713017	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	545	Open in IMG/M
3300010359\|Ga0126376_12878402	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	531	Open in IMG/M
3300010360\|Ga0126372_10154926	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1838	Open in IMG/M
3300010398\|Ga0126383_10616274	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1158	Open in IMG/M
3300010398\|Ga0126383_11089017	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300010398\|Ga0126383_11254994	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	831	Open in IMG/M
3300010398\|Ga0126383_12557265	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	594	Open in IMG/M
3300012198\|Ga0137364_11320940	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	536	Open in IMG/M
3300012199\|Ga0137383_11134985	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	564	Open in IMG/M
3300012285\|Ga0137370_10248327	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1053	Open in IMG/M
3300012354\|Ga0137366_10301759	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1178	Open in IMG/M
3300012948\|Ga0126375_11552315	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	568	Open in IMG/M
3300012971\|Ga0126369_11696909	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	721	Open in IMG/M
3300012971\|Ga0126369_13078391	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	546	Open in IMG/M
3300013096\|Ga0157307_1050208	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	779	Open in IMG/M
3300013296\|Ga0157374_12059304	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	597	Open in IMG/M
3300014969\|Ga0157376_11446793	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	719	Open in IMG/M
3300015200\|Ga0173480_10800591	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	602	Open in IMG/M
3300015357\|Ga0134072_10388456	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	546	Open in IMG/M
3300015372\|Ga0132256_100244226	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1861	Open in IMG/M
3300015372\|Ga0132256_100916278	All Organisms → cellular organisms → Bacteria	992	Open in IMG/M
3300015372\|Ga0132256_102889241	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	577	Open in IMG/M
3300015373\|Ga0132257_100298991	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1933	Open in IMG/M
3300015374\|Ga0132255_104034893	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	623	Open in IMG/M
3300015374\|Ga0132255_104276876	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	606	Open in IMG/M
3300015374\|Ga0132255_105996027	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	514	Open in IMG/M
3300016270\|Ga0182036_10468337	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	993	Open in IMG/M
3300016270\|Ga0182036_10572149	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	903	Open in IMG/M
3300016270\|Ga0182036_11343655	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	597	Open in IMG/M
3300016294\|Ga0182041_12322163	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	502	Open in IMG/M
3300016319\|Ga0182033_11223453	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	673	Open in IMG/M
3300016319\|Ga0182033_11266818	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	662	Open in IMG/M
3300016357\|Ga0182032_10200491	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1518	Open in IMG/M
3300016371\|Ga0182034_10805562	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	804	Open in IMG/M
3300016371\|Ga0182034_10951851	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	740	Open in IMG/M
3300016387\|Ga0182040_10563433	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	918	Open in IMG/M
3300016387\|Ga0182040_11031499	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	687	Open in IMG/M
3300016387\|Ga0182040_11890570	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	512	Open in IMG/M
3300016387\|Ga0182040_11929924	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	507	Open in IMG/M
3300016404\|Ga0182037_11232485	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	658	Open in IMG/M
3300016422\|Ga0182039_10110081	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2054	Open in IMG/M
3300016422\|Ga0182039_11497589	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300016445\|Ga0182038_10589153	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	959	Open in IMG/M
3300017657\|Ga0134074_1142779	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	835	Open in IMG/M
3300018431\|Ga0066655_10537422	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	779	Open in IMG/M
3300019361\|Ga0173482_10779663	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	504	Open in IMG/M
3300025903\|Ga0207680_10266509	All Organisms → cellular organisms → Bacteria	1187	Open in IMG/M
3300025915\|Ga0207693_10808522	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	722	Open in IMG/M
3300025927\|Ga0207687_10313364	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1268	Open in IMG/M
3300025934\|Ga0207686_10645576	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300025936\|Ga0207670_11913551	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	504	Open in IMG/M
3300025939\|Ga0207665_10262613	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1280	Open in IMG/M
3300026041\|Ga0207639_12187550	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	514	Open in IMG/M
3300026095\|Ga0207676_10278773	All Organisms → cellular organisms → Bacteria	1517	Open in IMG/M
3300026331\|Ga0209267_1272694	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	572	Open in IMG/M
3300026528\|Ga0209378_1303946	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	511	Open in IMG/M
3300030844\|Ga0075377_10010170	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	771	Open in IMG/M
3300030916\|Ga0075386_12182241	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	575	Open in IMG/M
3300030973\|Ga0075395_10100139	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	644	Open in IMG/M
3300031231\|Ga0170824_116079724	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	552	Open in IMG/M
3300031231\|Ga0170824_116792160	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1205	Open in IMG/M
3300031573\|Ga0310915_10641945	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	751	Open in IMG/M
3300031573\|Ga0310915_10812723	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	657	Open in IMG/M
3300031744\|Ga0306918_10045093	All Organisms → cellular organisms → Bacteria	2894	Open in IMG/M
3300031744\|Ga0306918_10368357	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1116	Open in IMG/M
3300031744\|Ga0306918_11437553	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	528	Open in IMG/M
3300031744\|Ga0306918_11521729	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	511	Open in IMG/M
3300031782\|Ga0318552_10478332	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	636	Open in IMG/M
3300031833\|Ga0310917_10965933	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	572	Open in IMG/M
3300031833\|Ga0310917_11169820	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	512	Open in IMG/M
3300031879\|Ga0306919_10244628	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1348	Open in IMG/M
3300031890\|Ga0306925_10418611	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1434	Open in IMG/M
3300031897\|Ga0318520_10383314	Not Available	857	Open in IMG/M
3300031910\|Ga0306923_11993346	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	589	Open in IMG/M
3300031912\|Ga0306921_11893372	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	638	Open in IMG/M
3300031941\|Ga0310912_10350034	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1147	Open in IMG/M
3300031941\|Ga0310912_10949836	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300031942\|Ga0310916_10144522	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1957	Open in IMG/M
3300031942\|Ga0310916_10269276	All Organisms → cellular organisms → Bacteria	1438	Open in IMG/M
3300031945\|Ga0310913_10737278	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	696	Open in IMG/M
3300031947\|Ga0310909_10368241	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1206	Open in IMG/M
3300031947\|Ga0310909_10818980	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	768	Open in IMG/M
3300031947\|Ga0310909_10884029	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	734	Open in IMG/M
3300031954\|Ga0306926_10836304	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1107	Open in IMG/M
3300031954\|Ga0306926_11450040	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	794	Open in IMG/M
3300032001\|Ga0306922_10338361	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1615	Open in IMG/M
3300032001\|Ga0306922_10836661	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	960	Open in IMG/M
3300032055\|Ga0318575_10414304	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	684	Open in IMG/M
3300032076\|Ga0306924_11290638	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	785	Open in IMG/M
3300032261\|Ga0306920_101583538	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	932	Open in IMG/M
3300032261\|Ga0306920_101592453	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	929	Open in IMG/M
3300033289\|Ga0310914_10411332	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1224	Open in IMG/M
3300033289\|Ga0310914_10675240	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	928	Open in IMG/M
3300033475\|Ga0310811_11378109	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	547	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	83.21%
Host-Associated	Host-Associated	16.79%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.21%
Plants	Host-Associated → Plants	16.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.21%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.21%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.58%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.23%
Loam	Environmental → Terrestrial → Soil → Loam	12.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.63%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.58%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.05%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.53%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	42.75%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.08%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.63%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.11%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.58%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.05%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.53%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	24.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.27%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.16%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.11%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.05%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.05%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	3.05%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.05%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.05%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.29%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	2.29%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.53%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.53%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.53%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.53%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.76%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.76%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.76%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459003	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm	Environmental	Open in IMG/M
2170459006	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect in plug lysis (for fosmid construction) 0-10cm	Environmental	Open in IMG/M
2170459009	Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect DNA Tissue lysis 0-10cm	Environmental	Open in IMG/M
2170459023	Grass soil microbial communities from Rothamsted Park, UK - FA3 (control condition)	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000893	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A001	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013096	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300030844	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA11 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030916	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030973	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB6 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E4A_04040310	2170459003	Grass Soil	MSISDEQGQMIRDELKRFAGEINLSDEQKTKLHERLAFAAGRLFEYKKSHPEVTRQD
E4A_09487330	2170459003	Grass Soil	MSISDEQGQMIRNELKRFAGDINLSDEQKTKLHERLAFAAGRLFEYKKSHPEVTRQDIIKAVGSRRA
L01_01871940	2170459006	Grass Soil	MSISDEQGQMIRDELKRFAGEINLSDEQKTKLHERLAFAAGRLFEYKKSHP
F47_11857650	2170459009	Grass Soil	MIRNELKRFAGDINLSDEQKTKLHERLAFAAGRLFEYKKSHPEVTRQDIIK
FA3_01435210	2170459023	Grass Soil	MGISDEQGQMIGNELKRFAGDINLSDEQKTRLHERLAFAAGRLFEYKKSHPDVT
AF_2010_repII_A1DRAFT_101385551	3300000597	Forest Soil	MNDEQVDAIRNELKRFAGDINLSDEQKTKLHERLAFAAGRLHEYTKSHPEVTRQD
AP72_2010_repI_A001DRAFT_10081351	3300000893	Forest Soil	MNDEQAQALRNEIKRFAGDLNLSDEQKTKLHERMAFAAGRLFEYKKSHPDVTRQ
Ga0066677_103753461	3300005171	Soil	MGISDEQGQMIGNELKRFAGDINLSDEQKTRLHERLAFAAGRLFEYKKSHPEVTRQD
Ga0065705_110086332	3300005294	Switchgrass Rhizosphere	MGISDEQGQMIGNELRRFAGDINLSDEQKTKLHERLAFAAGRLFEYKKSHPEVTRQDIIKAV
Ga0070683_1000681856	3300005329	Corn Rhizosphere	MNDEQAQALRNELKRIGGELNLSDEQKTKLHERMAFAAGRLFEYKKSHPDV
Ga0070690_1007562641	3300005330	Switchgrass Rhizosphere	MNDEQAQALRNELKRIGGELNLSDEQKTKLHERMAFAAGRLFEYKKSHPDVTRQDVINALKSHRTELREGLERFL
Ga0066388_1022639023	3300005332	Tropical Forest Soil	MNDEQAQTIRNELKRIGGELNLSDEQKTKLHERMAFAAGRLHEYKKSHPGVTREDIIQAFRS
Ga0066388_1030823571	3300005332	Tropical Forest Soil	MNDEQAQALRNELKRFAGDLNLSDEQKTKLHERLAFAAGRLHEYKKSHPDVTRQDII
Ga0066388_1085741131	3300005332	Tropical Forest Soil	MSLSDEQGQAIRSELKRIKGDLNLSDEQTTKLHERMAFAAGRLHEYKKSHPEVTRQD
Ga0070674_1018152772	3300005356	Miscanthus Rhizosphere	MNDEQGQAIRNELKRIAGELNLSDEQKTKLHERMAFAAGRLFEYKKSHPDVTRQDVINALKSHRTELREGLERFLTPE
Ga0070659_1010112761	3300005366	Corn Rhizosphere	MGISDEQGQMIGNELRRFAGDINLSDEQKTKLHERLAFAAGRLFEYKKSHPEVTRQDIIKAVGS
Ga0070709_101852394	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MGISDEQGQMIGNELKRFAGDINLSDEQKTRLHERLAFAAGRLFEYKKSHPEVTRQDII
Ga0070709_111922212	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MNDEQGQAIRNELKRFAGDLNLSDEQKTKLHERMAFAAGRLHEYKKSHPDVTRQDIINALRS
Ga0066707_100342256	3300005556	Soil	MSISEEQGQMIRNELKRFAGDINLSDEQKTKLHERLAFAAGRLFEYKKSHPEVTR
Ga0066707_101501051	3300005556	Soil	MGISDEQGQAIGNELRRFAGDINLSDEQKTKLHERLAFAAGRLFEYKKSHPEVTR
Ga0066903_1002717101	3300005764	Tropical Forest Soil	MNDEQVQAIKNELKRIGGELNLSDEQKAKLHERMAFAAGRLHEYKKSHPDVSRQDIINALRSHR
Ga0066903_1005427551	3300005764	Tropical Forest Soil	MNDEQAQLIRNEIKRFAGDLNLSDEQKTKLHERLAFAAGRLHEYKKSHPEVTRQDIIKA
Ga0066903_1013482982	3300005764	Tropical Forest Soil	MNDEQVQAIRNELKRIGGELNLSDEQKAKLHERMAFAAGRLHEYKKSHPDVSRQDIINALRSHR
Ga0066903_1044423242	3300005764	Tropical Forest Soil	MSLSDEQGQAIRNELKRFAGDINLSDEQKTKLHERLAFAAGRLHEYKKSHPNVT
Ga0066903_1065739812	3300005764	Tropical Forest Soil	MNDEQAQAIRSELKRFAGDLNLSDEQKTKLHERLVFAAGRLHEYKKSHPEVTRQDIVKAIGSRRTELREGLERF
Ga0075432_103165071	3300006058	Populus Rhizosphere	MNDEQAQALRNELKRFAGDLNLSDEQKTKLHERLAFAAGRLHEYKKSHPEVTRQDIIKAIGSRRTELR
Ga0070712_1007341041	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MSLSVEQGQMIRNELKRFAGDLDLSDEQKTKLHEQLAFAAGTLHEYKKSHPDVSRQDIVRAVGSHRTELRQALERFLN
Ga0066665_108422841	3300006796	Soil	MGISDEQGQMIGNELKRFAGDINLSDEQKTRLHERLAFAAGRLFEYKKSHPEVTRQDIIKAVGSR
Ga0075425_1020050161	3300006854	Populus Rhizosphere	MSLSVEQGQMIRNELKRFAGDLDLSDEQKTKLHEQLAFAAGTLHEYKKSHPDVTRQDIIRAVGSHRAELREALERF
Ga0075429_1016026151	3300006880	Populus Rhizosphere	MNEEQGQAIRNELKRFAGDLNLSDEQKTKLHERMAFAAGRLHEYKKSHPEVT
Ga0075436_1015679012	3300006914	Populus Rhizosphere	MNEEQGQAIRNELKRFAGDLNLSDEQKTKLHERMAFAAGRLHEYKKSHPEVTRQD
Ga0066710_1006061613	3300009012	Grasslands Soil	MNDEEGKAIRHELKRFAGDLNLSDEQKIKLHERMAFAAGRLHEYKKCNPEVTRQDIIKALKSHR
Ga0111539_107627492	3300009094	Populus Rhizosphere	MSLSEEQGQMIRNELKRFAGDINLSDEQKTKLHERLAFAAGRLFEYKKSHPEVARQDIVKAVGSHRAELREGLE
Ga0075423_107686201	3300009162	Populus Rhizosphere	MNDEQGQAIRNELKRFAGDLNLSDEQKTKLHERMAFAAGRLHEYKKSHPEVTRQDIIKAIGSRRTELREGLE
Ga0126373_109991361	3300010048	Tropical Forest Soil	MSLSDEQGQAIRNEIKRFAGDLNLSDEQKTKLHERMAFAAGRLHEYKKSHPDVSRQDIINALKSHRTELRE
Ga0134086_102684381	3300010323	Grasslands Soil	MGISDEQGQMIGNELKRFAGDINLSDEQKTKLHERLAFAAGRLFEYKKSHPEVTRQDIIKAVGS
Ga0126376_116084561	3300010359	Tropical Forest Soil	MTDEQAQAIGSELKRIAGDLNLSDEQKTKLRERMAFAAGRLHEYKKSHPDVTRQDIIKAVGSHPTELREALERFLT
Ga0126376_127130171	3300010359	Tropical Forest Soil	MSFSDEQGQAIRNELKRFAGDLNLSDEQKTKLHERMAFAAGRLHEYKKSHPD
Ga0126376_128784021	3300010359	Tropical Forest Soil	MNEEQGQAIRNELKRFAGDLNLSDEQKTKLHERMAFAAGRLHEYKKSHPDVTRQDIINALKSHR
Ga0126372_101549261	3300010360	Tropical Forest Soil	MNDEQAQAIRNELKRFAGDLNLSDEQKTKLHERLVFAAGRLHEYKKSHPEVTRQDIVKAIGSRRTELREGLER
Ga0126383_106162742	3300010398	Tropical Forest Soil	MTDEQGQAIRNELKRFAGDLNLSDEQKAKLHERMAFASGRLHEYKKSHPDVTRQ
Ga0126383_110890171	3300010398	Tropical Forest Soil	MTDEQVQAIRNEQKRIGGELNLSDEQKTKLHERMAFASGRLFEYKKSNPGVTREDVFNALKSHRAELREGLERF
Ga0126383_112549941	3300010398	Tropical Forest Soil	MTEEQGQAIRNELKRIAGDLNLSDEQKTKLHERMAFAAGRLHEYKKSHPDVTRQDVINA
Ga0126383_125572651	3300010398	Tropical Forest Soil	MTDEQGQAIRNELKRIAGDLNLSDEQKTKLHERIAFAAGRLHEYKKSHPDVTRQDIINALRS
Ga0137364_113209401	3300012198	Vadose Zone Soil	MSISDEQGQAIGNELRRFAGDINLSDEQKTKLHERLAFAAGRLFEYKKSHPE
Ga0137383_111349851	3300012199	Vadose Zone Soil	MGISDEQGQMIGNELKRFAGDINLSDEQKTRLHERLAFAAGRLFEYKKSHPEVTRQDIIK
Ga0137370_102483272	3300012285	Vadose Zone Soil	MGISDEQGQMIGNELKRFAGDINLSDEQKTRLHERLAFAAGRLFEYKKSHPEVTRQDIIKAVGSRR
Ga0137366_103017591	3300012354	Vadose Zone Soil	MGISDEQGQMIGNELKRFAGDINLSDEQKTRLHERLAFAAGRLFEYKKSHPEVTRQDIIKAVGSRRAELREGLERF
Ga0126375_115523151	3300012948	Tropical Forest Soil	MTDEQAQAIGSELKRIAGDLNLSDEQKTKLRERMAFAAGRLHEYKKSHPDVTRQDII
Ga0126369_116969092	3300012971	Tropical Forest Soil	MNDEQAQAIRNELKRFAGDLNLSDEQKTKLHERLVFAASRLHEYKKSHPEVTRQDIVKAIGSRRT
Ga0126369_130783911	3300012971	Tropical Forest Soil	MNDEQAQAIRNELKRFAGDLNLSDEQKTKLHERLVFAAGRLHEYKKSHPEVTRQDIIKAI
Ga0157307_10502081	3300013096	Soil	MNDEQAQVIRNELKRFAGDLNLSDEQKTKLHERMVFAAGRLHEYKKSHPDVTRQDIIKAIGSRRT
Ga0157374_120593041	3300013296	Miscanthus Rhizosphere	MNDEQAQAIRSELKRFAGDLNLSDEQKTKLHERMVFAAGRLHEYKKSHPEVSRQDIIKAIGSRRTEL
Ga0157376_114467931	3300014969	Miscanthus Rhizosphere	MSLSDEQGQAIKNELKRFAGDINLSDEQKTKLHERLAFAAGRLHEYKKSHPNV
Ga0173480_108005911	3300015200	Soil	MNDEQAQALRNEIKRFAGDLNLSDEQKTKLRERLAFAAGRLHEYKKSHPDVTRQD
Ga0134072_103884561	3300015357	Grasslands Soil	MGISDEQGQMIGNELKRFAGDINLSDEQKTRLHERLAFAAGRLFEYKKSHPEVTRQDI
Ga0132256_1002442261	3300015372	Arabidopsis Rhizosphere	MAFSIVSKQLTIERNKTMNDEQGQAIRNEIKRFAGDLNLSDEQKTKLHERMAFAAGRLFEYKKSHPDVTRQDVINALKSHRTELRQGLE
Ga0132256_1009162781	3300015372	Arabidopsis Rhizosphere	MNDEQAQALRNEIKRFAGDLNLSDEQKTKLHERMAFAAGRLFEYKKSHPDVTRQDVINALKSRRTELREGLERF
Ga0132256_1028892411	3300015372	Arabidopsis Rhizosphere	MNDEQDQVIGNEIKRIAGGLNLSDEQKTKLHERMAFAAGRLHEYKKSHPDVTRQDVISTLRSH
Ga0132257_1002989912	3300015373	Arabidopsis Rhizosphere	MNEEQGQAIRNELKRFAGDLNLSDEQKTKLHERMAFAAGRLHEYKKSHPDVTRQDIINALKSHRTEL
Ga0132255_1040348931	3300015374	Arabidopsis Rhizosphere	MNDEQVQAIGNEIKRIAGGLNLSDEQKTKLHERMAFAAGRLHEYKKSHPDVTRQDVINTLRSHR
Ga0132255_1042768762	3300015374	Arabidopsis Rhizosphere	MNDEQAQALRNEIKRFAGDLNLSDEQKTKLHERMAFAAGRLFEYKKSHPDVTRQDVINALKSRRT
Ga0132255_1059960271	3300015374	Arabidopsis Rhizosphere	MNDEQAQALRNEIKRFAGDLNLSDEQKTKLHERMAFAAGRLFEYKKSHPD
Ga0182036_104683372	3300016270	Soil	MSLSVEQGQAIRNELKRFAGDLNLSDEQKTKLHEQMAFAAGILHEYKKSHPEVTRQDLIKAVG
Ga0182036_105721492	3300016270	Soil	MSLSNEQGEAIRNELRRFAGDLNLSDEQKAKLHEQMAFAAGRLHEYKKSHPDVTRQDV
Ga0182036_113436551	3300016270	Soil	MNDEQAQAVRNELKRIGGNLNLSDEQKTKLHERMAFAAGRLHEYKKSHPEVTR
Ga0182041_123221631	3300016294	Soil	MLSDEQGQAIRNELKRFAGDINLSDEQKTKLHERLAFAAGRLHEYKKSHPDVTRQD
Ga0182033_112234531	3300016319	Soil	MTDEQGQAIRNELKRFAGDLNLSDEQKTKLHERMAFAAGRLHEYKKSHPDVTRQDVINALRSHRTELREGLERFLT
Ga0182033_112668182	3300016319	Soil	MTDEQGQAIRNELKRFAGDLNLSDEQKAKLHERMAFAAGRLHEYQKSHPDVTRQDVIN
Ga0182032_102004913	3300016357	Soil	MSLSNEQGEAIRNELRRFAGDLNLSDEQKAKLHEQMAFAAGRLHEYKKSHPDVMRQDIIKAVGSHRTELR
Ga0182034_108055621	3300016371	Soil	MNDEQAQAIRNELKRIGGNLNLSDEQKTKLHERMAFAAGRLHEYKKSHPEVTREDVINALRSHRTELREGLERFL
Ga0182034_109518511	3300016371	Soil	MSLSVEQGQAIRNELKRFAGDLNLSDEQKTKLHEQMAFAAGILHEYKKSHPEVTRQDLIKAVGSHRAELRQALERFLT
Ga0182040_105634331	3300016387	Soil	MNEEQGQAIRNELKRFARDLNLSDEQKTKLHERMAFAAGRLHEYKKSHPDVTRQDVINALKSHRTELRE
Ga0182040_110314992	3300016387	Soil	MNDEQAQALRNEIKRFAGDLNLSDEQKTKLHERMAFAAGRLHEYKKSHPDVTRQDVINALKSHR
Ga0182040_118905701	3300016387	Soil	MNDEQAQALRNEIKRFEGDLNHSDEQKTKLRERMAFAAGRLHEYKKSQTDVTRQDIIN
Ga0182040_119299241	3300016387	Soil	MSLSVEQGQAIRNELKRFAGDLNLSDEQKTKLHEQMAFAAGILHEYKKSHPEVTRQDLIKAVGSH
Ga0182037_112324852	3300016404	Soil	MTDEQGQAIRNELKRFAGDLNLSDEQKTKLHERMAFAAGRLHEYKKSHPDVTRQDIIKA
Ga0182039_101100814	3300016422	Soil	MNDEQAQALRNEIKRFAGDLNLSDEQKTKLHERMAFAAGRLHEYKKSHPDVTRQD
Ga0182039_114975891	3300016422	Soil	MTDEQGQAIRNELKRFAGDLNLSDEQKTKLHERMAFAAGRLHEYKKSHPDVTRQ
Ga0182038_105891532	3300016445	Soil	MSLSAEQGQAIRNEIKRFAGDLNLSDEQKTKLHERMAFAAGRLHEYKKSHPDVTRQDVI
Ga0134074_11427792	3300017657	Grasslands Soil	MSISEEQGQMIRNELKRFAGDINLSDEQKTKLHERLAFAAGRLFEYKKSHPE
Ga0066655_105374221	3300018431	Grasslands Soil	MSISEEQGQMIRNELKRFAGDINLSDEQKTKLHERLAFAAGRLFEYKKSHPEVTRQDIIK
Ga0173482_107796631	3300019361	Soil	MSISDEQGQAIRNEFKRFAGDMNLSDEQKTKLHERLAFAAGRLFEYKKSHPDVTRQDIIK
Ga0207680_102665091	3300025903	Switchgrass Rhizosphere	MGISDEQGQMIGNELRRFAGDINLSDEQKTKLHERLAFAAGRLFEYKKSHPEVTR
Ga0207693_108085221	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MSLSVEQGQMIRNELKRFAGDLDLSDEQKTKLHEQLAFAAGTLHEYKKSHPDVSRQDIVRAVGSHRTELRQALERFLNPE
Ga0207687_103133643	3300025927	Miscanthus Rhizosphere	MGISDEQGQMIGNELRRFAGDINLSDEQKTKLHERLAFAAGRLFEYKKSHPEVTRQDIIKAVGSHRAE
Ga0207686_106455761	3300025934	Miscanthus Rhizosphere	MGISDEQGQMIGNELRRFAGDINLSDEQKTKLHERLAFAAGRLAEYTKSHPDVTR
Ga0207670_119135511	3300025936	Switchgrass Rhizosphere	MGISDEQGQMIGNELRRFAGDINLSDEQKTKLHERLAFAAGRLFEYKKSHPEVTRQDIIKAVGSRRAELRE
Ga0207665_102626131	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MNDEQGQAIRNELKRFAGDLNLSDEQKTKLHERMAFAAGRLHEYKKSHPDVTRQDIINALRSHRAE
Ga0207639_121875501	3300026041	Corn Rhizosphere	MGISDEQGQMIGNELRRFAGDINLSDEQKTKLHERLAFAAGRLFEYKKSHPEVTRQDIIKAVGSRRAELREGL
Ga0207676_102787731	3300026095	Switchgrass Rhizosphere	MNDEQAQALRNELKRIGGELNLSDEQKTKLHERMAFAAGRLFEYKKSHPDVTRQDVINALKSHRTELREGLE
Ga0209267_12726941	3300026331	Soil	MGISDEQGQMIGNELKRFAGDINLSDEQKTRLHERLAFAAGRLFEYKKSHPEVTRQDIIKAVGSRRAELREGLE
Ga0209378_13039461	3300026528	Soil	MGISDEQGQMIGNELKRFAGDINLSDEQKTRLHERLAFAAGRLFEYKKSHPEVTRQDIIKAVGSRRAELRE
Ga0075377_100101701	3300030844	Soil	MSISDEQGQAIRNEFKRFAGDMNLSDEQKTKLHERLAFAAGRLFEYKKSHPEVTRQD
Ga0075386_121822412	3300030916	Soil	MNDEQAQAIRNELKRFAGDLNLSDEQKTKLHERMAFAAGRLHEYKKSHPDVTRQDII
Ga0075395_101001391	3300030973	Soil	MSISDEQGQMIRNELKRFAGDINLSDEQKTKLHERLAFAAGRLFEYKKSHPEVTRQDIIKAVGS
Ga0170824_1160797241	3300031231	Forest Soil	MNDEQAQAIRNELKRFAGDLNLSDEQKTKLHERMAFAAGRLHEYKKSHPDVTRQDIID
Ga0170824_1167921601	3300031231	Forest Soil	MGISDEQGQMIGNELKRFAGDINLSDEQKTRLHERLAFAAGRLFEYKKSHPDVTRQDIIKAVGSRRAE
Ga0310915_106419452	3300031573	Soil	MNDEQAQALRNEIKRFAGDLNLSDEQKTKLHERMAFAAGRLHEYKKSHPDVT
Ga0310915_108127231	3300031573	Soil	MNDEQGQAIRNEIKRFAGDLNLSDEQKTKLHERMAFAAGRLHEYKKSHPDVTRQDIIN
Ga0306918_100450935	3300031744	Soil	MNDEQAQALGNELKRFAGDLNLSDEQKTKLRERLAFAAGRLHEYKKSHPDVTRQDIINALKSRRTELREGLERFLT
Ga0306918_103683571	3300031744	Soil	MNDEQAQALRNEIKRFAGDLNLSDEQKTKLHERMAFAAGRLHEYKKSHPDVTRQDVINALKSH
Ga0306918_114375531	3300031744	Soil	MSLTDEQAGAIKNELKRIAGDLNLSDEQKTKLHERLASAAEKLHEYKKSNPNVTRDDIIKAVV
Ga0306918_115217291	3300031744	Soil	MNDEQAQALRNEIKRFAGDLNLSDEQKTKLHERMAFAAGRLHEYKKSHPDVTRQDVINALKSHRTELRE
Ga0318552_104783321	3300031782	Soil	MNLTAEQVEGIKNELKRFAGDLNLSDEQKTKLHERLASAAEKLHEYKKSHPDVTRQDIIKAVASHRTELRTAVEHLL
Ga0310917_109659331	3300031833	Soil	MNDEQAQALRNEIKRFAGDLNLSDEQKTKLHERMAFAAGRLHEYKKSHPDVTRQDVINALRSHRTELREGL
Ga0310917_111698201	3300031833	Soil	MTDEQGQAIRNELKRFAGDLNLSDEQKTKLHERMAFAAGRLHEYKKSHPEVTREDIIKAIGSH
Ga0306919_102446283	3300031879	Soil	MNEEQGQAIRNELKRFAGDLNLSDEQKTKLHERMAFAAGRLHEYKKSHPDVTRQD
Ga0306925_104186111	3300031890	Soil	MNDEQAQAIRNELKRIGGELNLSDEQKTKLHERMAFAAGRLYEYKKSHPEVTREDV
Ga0318520_103833142	3300031897	Soil	MSLTDEQVEAIKNELKRIAGDLNLSDEQKTKLHERLTSAADKLHEYKKSNPNVTREDII
Ga0306923_119933461	3300031910	Soil	MNDEQAQALRNEIKRFAGDLNLSDEQKTKLHERMAFAAGRLHEYKKSHPDVTRQDIINAL
Ga0306921_118933721	3300031912	Soil	MTDEQGQAIRNELKRFAGDLNLSDEQKAKLHERMAFAAGRLHEYKKSHPDVTRQDVINALRSH
Ga0310912_103500343	3300031941	Soil	MNDEQAQALRNEIKRFAGDLNLSDEQKTKLHERMAFAAGRLHEYKKSHPDVTRQDVINALKS
Ga0310912_109498362	3300031941	Soil	MSLTIEQGETIRNELRRFAGDLNLSDEQKTKLHEQLAFAAGRLHEYKKSHPEVMRQDIIKAVGSHRTE
Ga0310916_101445223	3300031942	Soil	MNDEQAQALGNELKRFAGDLNLSDEQKTKLHERLAFAAGRLFEFKKSHPDVTRQDIIKAV
Ga0310916_102692764	3300031942	Soil	MTDEQGQAIRNELKRFAGDLNLSDEQKTKLHERMAFAAGRLHEYKKSHPDV
Ga0310913_107372781	3300031945	Soil	MNDEQAQALRNEIKRFAGDLNLSDEQKTKLHERMAFAAGRLFEYKKSHPDVTRQDVINALKSHRTELREGLERFLTPE
Ga0310909_103682411	3300031947	Soil	MNDEQAQALRNEIKRFAGDLNLSDEQKTKLHERMAFAAGRLHEYKKSHPDVTRQDVI
Ga0310909_108189801	3300031947	Soil	MTDEQGQAIRNELKRFAGDLNLSDEQKAKLHERMAFAAGRLHEYKKSHPDVTRQDVINALRSHRT
Ga0310909_108840292	3300031947	Soil	MNLTAEQVEGIKSELKRIGGDLKLSDEQKTKLHERLTSAAEKLHEYKQSHPNATRDDIIKAVVSHKAE
Ga0306926_108363042	3300031954	Soil	MSLSIEQAETIKNELRRFAGDLNLSDEQKTKLHEQLAFAAGRLHEYKKSHPEVKRQDIIKAVASHRT
Ga0306926_114500401	3300031954	Soil	MNDEQAQAIGSELKRIAGDLNLSDEQKTKLHERMAFAAGRLHEYKKSHPDVTRQDVI
Ga0306922_103383612	3300032001	Soil	MSLSNEQGEAIRNELRRFAGDLNLSDEQKAKLHEQMAFAAGRLHEYKKSHPDVMRQDIIKAVGSHRT
Ga0306922_108366611	3300032001	Soil	MTDEQGQAIRNELKRFAGDLNLSDEQKAKLHERMAFAAGRLHEYKKSHPDVTRQDVINAL
Ga0318575_104143041	3300032055	Soil	MSLSNEQGEAIRNELRRFAGDLNLSDEQKAKLHEQMAFAAGRLHEYKKSHPDVMRQDIIKAVGSHRTELRQALE
Ga0306924_112906381	3300032076	Soil	MNDEQAQAIRNELKRIGGELNLSDEQKAKLHERMAFAAGRLHEYKKSHPEVTR
Ga0306920_1015835382	3300032261	Soil	MNDEQGQAIRNEIKRFAGDLNLSDEQKTKLHERMAFAAGRLHEYKKSHPDVTRQDII
Ga0306920_1015924531	3300032261	Soil	MNLTAEQAEAIKNELKRFAGDLNLSDEQKTKLHERLASAAEKLHEYKKSHPNVT
Ga0310914_104113321	3300033289	Soil	MSLSNEQGEAIRNELRRFAGDLNLSDEQKAKLHEQMAFAAGRLHEYKKSHPDVM
Ga0310914_106752402	3300033289	Soil	MNDEQGQAIRNELKRFAGDLNLSDEQKTKLHERMAFAAGRLHEYKKSHPDVTRQDIINALRSHRTELREALERFLT
Ga0310811_113781091	3300033475	Soil	MNDEQAQAIRNELKRFAGDLNLSDEQKTKLHERLAFAAGRLHEYKKSHPDVTRQDIIKAIGSRRTELREGLERFL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F062046

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences