Metagenome / Metatranscriptome Family F062022

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F062022
Family Type	Metagenome / Metatranscriptome
Number of Sequences	131
Average Sequence Length	69 residues
Representative Sequence	NYVYDSESKKSGFVPPHLMFYAPYKTAKDVGYESVSPTMVPYLTGSGIGPESLLVVAAEKPSQGDSSGDSHKH
Number of Associated Samples	99
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	3.05 %
% of genes near scaffold ends (potentially truncated)	92.37 %
% of genes from short scaffolds (< 2000 bps)	77.10 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.27

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (65.649 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa (32.061 % of family members)
Environment Ontology (ENVO)	Unclassified (23.664 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (61.832 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 10.89% β-sheet: 9.90% Coil/Unstructured: 79.21%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.27
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.27
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF16694	Cytochrome_P460	3.05
PF07715	Plug	3.05
PF08281	Sigma70_r4_2	1.53
PF00486	Trans_reg_C	1.53
PF12704	MacB_PCD	1.53
PF04397	LytTR	1.53
PF13414	TPR_11	0.76
PF03466	LysR_substrate	0.76
PF05988	DUF899	0.76
PF06580	His_kinase	0.76
PF06745	ATPase	0.76
PF13181	TPR_8	0.76
PF14534	DUF4440	0.76
PF09286	Pro-kuma_activ	0.76
PF02800	Gp_dh_C	0.76
PF00121	TIM	0.76
PF01548	DEDD_Tnp_IS110	0.76
PF07730	HisKA_3	0.76
PF09351	DUF1993	0.76
PF13378	MR_MLE_C	0.76
PF02661	Fic	0.76
PF14559	TPR_19	0.76
PF04191	PEMT	0.76
PF01453	B_lectin	0.76
PF06445	GyrI-like	0.76
PF02077	SURF4	0.76
PF05598	DUF772	0.76
PF05299	Peptidase_M61	0.76
PF12680	SnoaL_2	0.76
PF13376	OmdA	0.76
PF05239	PRC	0.76
PF06094	GGACT	0.76
PF13564	DoxX_2	0.76
PF00072	Response_reg	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG0057	Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase	Carbohydrate transport and metabolism [G]	0.76
COG0149	Triosephosphate isomerase	Carbohydrate transport and metabolism [G]	0.76
COG0308	Aminopeptidase N, contains DUF3458 domain	Amino acid transport and metabolism [E]	0.76
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	0.76
COG2972	Sensor histidine kinase YesM	Signal transduction mechanisms [T]	0.76
COG3275	Sensor histidine kinase, LytS/YehU family	Signal transduction mechanisms [T]	0.76
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.76
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.76
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.76
COG3975	Predicted metalloprotease, contains C-terminal PDZ domain	General function prediction only [R]	0.76
COG4312	Predicted dithiol-disulfide oxidoreductase, DUF899 family	General function prediction only [R]	0.76
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.76
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.76
COG4934	Serine protease, subtilase family	Posttranslational modification, protein turnover, chaperones [O]	0.76

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	65.65 %
Unclassified	root	N/A	34.35 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	65.65 %
Unclassified	root	N/A	34.35 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	65.65 %
Unclassified	root	N/A	34.35 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.35 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	19.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	13.74 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.35 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	15.27 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	6.11 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.53 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.53 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.35 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	15.27 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	3.05 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	1.53 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.53 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.76 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.76 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.35 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	15.27 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	3.05 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	1.53 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.53 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.76 %
Burkholderiales genera incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis	0.76 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.35 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	8.40 %
unclassified Steroidobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae	3.05 %
Silvibacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	1.53 %
Dyella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dyella	1.53 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.53 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.76 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.76 %
Aquabacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium	0.76 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.76 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.76 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.35 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	8.40 %
Steroidobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	3.05 %
Silvibacterium bohemicum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	1.53 %
Dyella flava	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dyella → Dyella flava	1.53 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.53 %
Aquabacterium pictum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	0.76 %
Acidobacterium ailaaui	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	0.76 %
Acidobacteriaceae bacterium KBS 89	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 89	0.76 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.76 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.76 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001151\|JGI12713J13577_1021619	All Organisms → cellular organisms → Bacteria → Acidobacteria	545	Open in IMG/M
3300002245\|JGIcombinedJ26739_100896152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	769	Open in IMG/M
3300004080\|Ga0062385_10565065	Not Available	713	Open in IMG/M
3300004080\|Ga0062385_11084754	Not Available	542	Open in IMG/M
3300004631\|Ga0058899_11811622	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300005591\|Ga0070761_10770187	Not Available	605	Open in IMG/M
3300005602\|Ga0070762_10269222	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dyella → Dyella flava	1065	Open in IMG/M
3300005712\|Ga0070764_10012930	All Organisms → cellular organisms → Bacteria	4109	Open in IMG/M
3300005712\|Ga0070764_10192092	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1141	Open in IMG/M
3300006176\|Ga0070765_100038822	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	3791	Open in IMG/M
3300006176\|Ga0070765_102078303	Not Available	531	Open in IMG/M
3300009624\|Ga0116105_1043711	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1010	Open in IMG/M
3300009628\|Ga0116125_1224069	Not Available	540	Open in IMG/M
3300009633\|Ga0116129_1002912	All Organisms → cellular organisms → Bacteria → Proteobacteria	8461	Open in IMG/M
3300009633\|Ga0116129_1087013	All Organisms → cellular organisms → Bacteria	914	Open in IMG/M
3300009665\|Ga0116135_1135684	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	911	Open in IMG/M
3300009698\|Ga0116216_10161612	All Organisms → cellular organisms → Bacteria	1376	Open in IMG/M
3300010376\|Ga0126381_100792789	All Organisms → cellular organisms → Bacteria	1360	Open in IMG/M
3300010379\|Ga0136449_101078574	All Organisms → cellular organisms → Bacteria	1281	Open in IMG/M
3300010398\|Ga0126383_10505234	All Organisms → cellular organisms → Bacteria	1268	Open in IMG/M
3300014201\|Ga0181537_10536115	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300014201\|Ga0181537_10766499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	655	Open in IMG/M
3300014489\|Ga0182018_10050516	All Organisms → cellular organisms → Bacteria → Acidobacteria	2544	Open in IMG/M
3300014493\|Ga0182016_10292963	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	999	Open in IMG/M
3300014495\|Ga0182015_10097050	All Organisms → cellular organisms → Bacteria	2049	Open in IMG/M
3300014657\|Ga0181522_10956825	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	529	Open in IMG/M
3300017975\|Ga0187782_11367638	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300017988\|Ga0181520_10592244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dyella → Dyella flava	771	Open in IMG/M
3300018009\|Ga0187884_10104500	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1230	Open in IMG/M
3300018037\|Ga0187883_10149697	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1202	Open in IMG/M
3300018042\|Ga0187871_10224816	Not Available	1045	Open in IMG/M
3300018043\|Ga0187887_10466156	Not Available	745	Open in IMG/M
3300018044\|Ga0187890_10542461	Not Available	655	Open in IMG/M
3300018044\|Ga0187890_10736483	Not Available	557	Open in IMG/M
3300020579\|Ga0210407_11193876	Not Available	573	Open in IMG/M
3300020583\|Ga0210401_10878388	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300020583\|Ga0210401_11617376	Not Available	505	Open in IMG/M
3300021180\|Ga0210396_10073810	All Organisms → cellular organisms → Bacteria	3101	Open in IMG/M
3300021180\|Ga0210396_10129488	All Organisms → cellular organisms → Bacteria	2274	Open in IMG/M
3300021401\|Ga0210393_10040319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3665	Open in IMG/M
3300021401\|Ga0210393_10110657	All Organisms → cellular organisms → Bacteria	2191	Open in IMG/M
3300021401\|Ga0210393_10274149	All Organisms → cellular organisms → Bacteria	1369	Open in IMG/M
3300021402\|Ga0210385_10020000	All Organisms → cellular organisms → Bacteria	4227	Open in IMG/M
3300021403\|Ga0210397_11214842	Not Available	586	Open in IMG/M
3300021405\|Ga0210387_10150650	All Organisms → cellular organisms → Bacteria → Proteobacteria	1989	Open in IMG/M
3300021406\|Ga0210386_10340369	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1289	Open in IMG/M
3300021433\|Ga0210391_11497263	Not Available	517	Open in IMG/M
3300021477\|Ga0210398_10110680	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2230	Open in IMG/M
3300022521\|Ga0224541_1018742	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	744	Open in IMG/M
3300022717\|Ga0242661_1155589	Not Available	516	Open in IMG/M
3300022840\|Ga0224549_1059427	Not Available	522	Open in IMG/M
3300025463\|Ga0208193_1005816	All Organisms → cellular organisms → Bacteria → Proteobacteria	4277	Open in IMG/M
3300027096\|Ga0208099_1063245	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300027432\|Ga0209421_1102808	Not Available	585	Open in IMG/M
3300027545\|Ga0209008_1122197	Not Available	577	Open in IMG/M
3300027567\|Ga0209115_1033599	All Organisms → cellular organisms → Bacteria → Proteobacteria	1161	Open in IMG/M
3300027590\|Ga0209116_1133753	Not Available	541	Open in IMG/M
3300027609\|Ga0209221_1009053	All Organisms → cellular organisms → Bacteria	2543	Open in IMG/M
3300027676\|Ga0209333_1003229	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6558	Open in IMG/M
3300027692\|Ga0209530_1046573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1274	Open in IMG/M
3300027783\|Ga0209448_10076455	All Organisms → cellular organisms → Bacteria	1124	Open in IMG/M
3300027853\|Ga0209274_10272300	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	868	Open in IMG/M
3300027853\|Ga0209274_10305210	All Organisms → cellular organisms → Bacteria	818	Open in IMG/M
3300027879\|Ga0209169_10060208	All Organisms → cellular organisms → Bacteria	1966	Open in IMG/M
3300027879\|Ga0209169_10146231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1230	Open in IMG/M
3300027879\|Ga0209169_10161025	All Organisms → cellular organisms → Bacteria → Acidobacteria	1169	Open in IMG/M
3300027895\|Ga0209624_10047178	All Organisms → cellular organisms → Bacteria → Proteobacteria	2755	Open in IMG/M
3300027895\|Ga0209624_10391374	All Organisms → cellular organisms → Bacteria	927	Open in IMG/M
3300028010\|Ga0265358_105333	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	505	Open in IMG/M
3300028572\|Ga0302152_10189810	Not Available	663	Open in IMG/M
3300028731\|Ga0302301_1000881	All Organisms → cellular organisms → Bacteria	11117	Open in IMG/M
3300028773\|Ga0302234_10409362	Not Available	580	Open in IMG/M
3300028775\|Ga0302231_10035075	All Organisms → cellular organisms → Bacteria	2144	Open in IMG/M
3300028781\|Ga0302223_10002285	All Organisms → cellular organisms → Bacteria → Acidobacteria	9593	Open in IMG/M
3300028788\|Ga0302189_10264117	Not Available	701	Open in IMG/M
3300028795\|Ga0302227_10063721	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 89	1634	Open in IMG/M
3300028801\|Ga0302226_10005814	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7849	Open in IMG/M
3300028808\|Ga0302228_10155509	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	1053	Open in IMG/M
3300028854\|Ga0302268_1070789	Not Available	880	Open in IMG/M
3300028906\|Ga0308309_10026437	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3911	Open in IMG/M
3300028906\|Ga0308309_11124427	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300029882\|Ga0311368_10066122	Not Available	3218	Open in IMG/M
3300029944\|Ga0311352_10767083	Not Available	756	Open in IMG/M
3300029944\|Ga0311352_10880650	Not Available	695	Open in IMG/M
3300029945\|Ga0311330_10428035	Not Available	1088	Open in IMG/M
3300029951\|Ga0311371_11177790	All Organisms → cellular organisms → Bacteria → Acidobacteria	888	Open in IMG/M
3300029956\|Ga0302150_10317671	Not Available	579	Open in IMG/M
3300029982\|Ga0302277_1019010	All Organisms → cellular organisms → Bacteria	3864	Open in IMG/M
3300029993\|Ga0302304_10139328	Not Available	915	Open in IMG/M
3300029993\|Ga0302304_10243837	Not Available	662	Open in IMG/M
3300029999\|Ga0311339_10346185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1574	Open in IMG/M
3300029999\|Ga0311339_11266016	Not Available	671	Open in IMG/M
3300030007\|Ga0311338_10092856	All Organisms → cellular organisms → Bacteria	3783	Open in IMG/M
3300030057\|Ga0302176_10263292	Not Available	691	Open in IMG/M
3300030058\|Ga0302179_10043145	All Organisms → cellular organisms → Bacteria	2053	Open in IMG/M
3300030058\|Ga0302179_10190458	All Organisms → cellular organisms → Bacteria → Acidobacteria	906	Open in IMG/M
3300030058\|Ga0302179_10288582	Not Available	723	Open in IMG/M
3300030058\|Ga0302179_10491899	Not Available	539	Open in IMG/M
3300030058\|Ga0302179_10512456	Not Available	526	Open in IMG/M
3300030399\|Ga0311353_10693050	All Organisms → cellular organisms → Bacteria	880	Open in IMG/M
3300030503\|Ga0311370_10967408	Not Available	954	Open in IMG/M
3300030503\|Ga0311370_11963859	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300030503\|Ga0311370_12334676	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	520	Open in IMG/M
3300030520\|Ga0311372_10271013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2721	Open in IMG/M
3300030520\|Ga0311372_12628519	Not Available	560	Open in IMG/M
3300030524\|Ga0311357_10049956	All Organisms → cellular organisms → Bacteria	4277	Open in IMG/M
3300030524\|Ga0311357_10748332	Not Available	883	Open in IMG/M
3300030524\|Ga0311357_11848650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	501	Open in IMG/M
3300030580\|Ga0311355_10722033	All Organisms → cellular organisms → Bacteria	924	Open in IMG/M
3300030617\|Ga0311356_10113283	All Organisms → cellular organisms → Bacteria	2831	Open in IMG/M
3300030618\|Ga0311354_10600300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	1069	Open in IMG/M
3300030646\|Ga0302316_10328753	Not Available	617	Open in IMG/M
3300030737\|Ga0302310_10201108	Not Available	1165	Open in IMG/M
3300030739\|Ga0302311_10029750	All Organisms → cellular organisms → Bacteria	4942	Open in IMG/M
3300030739\|Ga0302311_10303099	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	1159	Open in IMG/M
3300030760\|Ga0265762_1097810	Not Available	647	Open in IMG/M
3300031027\|Ga0302308_10073695	All Organisms → cellular organisms → Bacteria	2395	Open in IMG/M
3300031028\|Ga0302180_10144816	Not Available	1322	Open in IMG/M
3300031040\|Ga0265754_1013064	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	689	Open in IMG/M
3300031234\|Ga0302325_13279066	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300031708\|Ga0310686_107147712	All Organisms → cellular organisms → Bacteria → Proteobacteria	4927	Open in IMG/M
3300031708\|Ga0310686_107764915	Not Available	712	Open in IMG/M
3300031708\|Ga0310686_114459027	All Organisms → cellular organisms → Bacteria	1012	Open in IMG/M
3300031708\|Ga0310686_114815159	All Organisms → cellular organisms → Bacteria	1342	Open in IMG/M
3300031837\|Ga0302315_10623057	Not Available	573	Open in IMG/M
3300032515\|Ga0348332_11687101	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	595	Open in IMG/M
3300032895\|Ga0335074_11091799	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300032898\|Ga0335072_10620151	All Organisms → cellular organisms → Bacteria	1082	Open in IMG/M
3300033829\|Ga0334854_176075	Not Available	521	Open in IMG/M
3300034163\|Ga0370515_0355802	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300034163\|Ga0370515_0419556	Not Available	565	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.24%
Host-Associated	Host-Associated	0.76%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.73%
Aquatic	Environmental → Aquatic	14.50%
Plants	Host-Associated → Plants	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	45.04%
Peat	Environmental → Terrestrial → Peat	38.93%
Freshwater	Environmental → Aquatic → Freshwater	14.50%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified	38.93%
Loam	Environmental → Terrestrial → Soil → Loam	19.85%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	19.08%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	14.50%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.11%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.76%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	38.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	19.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.45%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	9.92%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	7.63%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	4.58%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.82%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.29%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	32.06%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.45%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	9.92%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	9.92%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	4.58%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	4.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.58%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	4.58%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.05%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.29%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	2.29%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.53%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.53%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.53%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.53%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	1.53%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.76%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.76%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001151	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300009628	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10	Environmental	Open in IMG/M
3300009633	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300022521	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E3 20-24	Environmental	Open in IMG/M
3300022717	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022840	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 1-5	Environmental	Open in IMG/M
3300025463	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10 (SPAdes)	Environmental	Open in IMG/M
3300027096	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF043 (SPAdes)	Environmental	Open in IMG/M
3300027432	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O2 (SPAdes)	Environmental	Open in IMG/M
3300027545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027567	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027590	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O1 (SPAdes)	Environmental	Open in IMG/M
3300027609	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027676	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3 (SPAdes)	Environmental	Open in IMG/M
3300027692	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028010	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZA6	Host-Associated	Open in IMG/M
3300028572	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_1	Environmental	Open in IMG/M
3300028731	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E1_2	Environmental	Open in IMG/M
3300028773	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_2	Environmental	Open in IMG/M
3300028775	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_2	Environmental	Open in IMG/M
3300028781	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_3	Environmental	Open in IMG/M
3300028788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_2	Environmental	Open in IMG/M
3300028795	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_1	Environmental	Open in IMG/M
3300028801	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_3	Environmental	Open in IMG/M
3300028808	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2	Environmental	Open in IMG/M
3300028854	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_1	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029945	I_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029956	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_2	Environmental	Open in IMG/M
3300029982	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_1	Environmental	Open in IMG/M
3300029993	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_2	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030057	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1	Environmental	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030646	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_2	Environmental	Open in IMG/M
3300030737	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_2	Environmental	Open in IMG/M
3300030739	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3	Environmental	Open in IMG/M
3300030760	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031027	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_3	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031040	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031837	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_1	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033829	Peat soil microbial communities from Stordalen Mire, Sweden - 715 P2 1-5	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12713J13577_10216191	3300001151	Forest Soil	KAPGPGFLYMMSTENYVYDPDAKQSGFVPPHLMFYTAYMTVKDLGYESISPTMVPYLVQPGEPEALIPIAVRRPAQDSSSGDSHKH*
JGIcombinedJ26739_1008961521	3300002245	Forest Soil	NSESKKSGFVPPHLMFYAPYKTAKDVGYESVSPKMVPYLTGSGVGPESLLVVVADKPSQDGSSGDSHKH*
Ga0062385_105650651	3300004080	Bog Forest Soil	MSNENFVYNNVSGKSGFVAPHLMFYAPNKTAKDVGYESVSPTMLPYLTGSGIGPENLLVVAAEKPSQGDSAGESHKH*
Ga0062385_110847541	3300004080	Bog Forest Soil	LMFYAPYKTAKDVGYESVSPTMVPYLTGSGVGPESLLVVGAEKPPQDSSSGDSHKH*
Ga0058899_118116221	3300004631	Forest Soil	TAKDAGYESISPTMVPFMTGDGPETLIIVMAKKPPQATSSDDSHKH*
Ga0070761_107701872	3300005591	Soil	YKDGRFKAPGPGFLYMMSNENYVYDSESKESRFVAPHLMFYAPNKTAQDVGYESVSPTMVPFLTTGSGIGAESLLVVLAKKPSQGDSTGDSHKH*
Ga0070762_102692222	3300005602	Soil	AKQWGAVPPHVMFYAPNKTVKDVGYESKSPAMVPYLTGDGPEALMVVMAKNPSQANSSDDSHKH*
Ga0070764_100129301	3300005712	Soil	LYMMSNENYVYNSESKKSGFVPPHLMFYAPYKTAKDVGYESVSPIMVPYLTGSGVGPESLLVVTADKPSQAGSSGDSHKH*
Ga0070764_101920921	3300005712	Soil	SESKKSGFVPPHLMFYAPYKTAKDVGYESVSPKMVPYLTGSGVGPESLLVVVADKPSQDGPSGDSHKH*
Ga0070765_1000388221	3300006176	Soil	HLMFYAPYKTAKDLGYESISPTMVPYLTGSGDPVALIVVAVPRRESPSDDSHKH*
Ga0070765_1020783032	3300006176	Soil	FKAPGPGFLYMMSNENYVYDDQSKESGIVPPHLMFYAPYKTAKDLGYESISPTMVPHLTQPGKAEALIVVAAKKPPQDSSPEDSHKH*
Ga0116105_10437112	3300009624	Peatland	ENYVYDSESKKSGFVPPHLMFYAPNKTAKDVGYESVSPTMVPYLTGSGIGPESLLVVAAEKPSQGDSSGDSHKH*
Ga0116125_12240691	3300009628	Peatland	KTAKDVGYESISPTMVPYLTGSTIGPETLLVVEAEKPSQGDSAGESHKH*
Ga0116129_10029125	3300009633	Peatland	MMSNENYVYNSDSKKSGFVPPHLMFYAPYKTAKDVGYESVSPIMVPYLTGSGVGPEALLVVAADKPSQDGSSSDSHKH*
Ga0116129_10870131	3300009633	Peatland	VPPHLMFYAPYKTAKDVGYESVSPTMMPYLTEPGGPEALIVVAVPQDSSSSSDDSHKH*
Ga0116135_11356841	3300009665	Peatland	NYVYDSESKKSGFVPPHLMFYAPYKTAKDVGYESVSPTMVPYLTGSGIGPESLLVVAAEKPSQGDSSGDSHKH*
Ga0116216_101616123	3300009698	Peatlands Soil	APYKTAKDVGYESVSPTMVPSLTGDGPETLLVVGAEKPPQDSSSGDSHKH*
Ga0126381_1007927892	3300010376	Tropical Forest Soil	SKESGFLAPHLMFYAPYKTVKDLGYESMSPTMVPHLTYPGPEGLIVVAAEKPSQDSSSGDSHKH*
Ga0136449_1010785743	3300010379	Peatlands Soil	MFYAPYKTAKDVGYESVSPTMVPSLTGDGPETLLVVGAEKPPQDSSSGDSHKH*
Ga0126383_105052343	3300010398	Tropical Forest Soil	MMSNENFVYDSESKESGFLAPHLMFYAPYKTVKDLGYESLSPTMVPHLTYPGPEGLIVVAAEKPSQDISSGDSHKH*
Ga0181537_105361151	3300014201	Bog	PPHLMFYAPNKTAKDVGYESVSPTMVPYLTGSGVGPESLLVVGAEKPSQGDSTGDSHKH*
Ga0181537_107664991	3300014201	Bog	ESKKSGFVPPHLMFYAPYKTARDIGYEAVSPTMVPYLTGSGVGPESLLVVVAEKPSPNAATGDSHKH*
Ga0182018_100505162	3300014489	Palsa	FLYMMSNENYVYDDQSKESGFVPPHLMFYAPYKTAKDLGYESISPTMVPYLTQPGKAEGLIVVAAKKPPHDSSPEDSHKH*
Ga0182016_102929631	3300014493	Bog	HLMFYAPNKTAKDVGYESVSPTMLPYLTGSGIGPENLLVVAAEKPSQGDSAGESHKH*
Ga0182015_100970503	3300014495	Palsa	YAPYMTAKDLGYESISPTMVPYLVLPGGPEALIVLAAPRQTQDSSSGDAHKH*
Ga0181522_109568252	3300014657	Bog	SGKSGFVPPHLMFYAPNKTAKDVGYESISPTMVPHLTGSGIGPESLLVVFAEKPSQGDSSGDSHKH*
Ga0187782_113676382	3300017975	Tropical Peatland	SDENYFYDSNAKQWGTVPSHLMFYAPYKTEKDAGYESKSPTMVPHITGNGPETLIVVFAKKPPEDSSSGDSHKHS
Ga0181520_105922441	3300017988	Bog	MFYAPNKTANDVGYDSVSPTMVPYLTGSGIGPESLLVVEAEKPSQGDSTGDSHKH
Ga0187884_101045001	3300018009	Peatland	FKVPGPGFLFMMSNENYVYDSESKESGFVPPHLMFYAPNKTAKDVGYESISPTMVPHLTGSGVGPESLLVVAAKKPAEDSSSGDSHKH
Ga0187883_101496971	3300018037	Peatland	PHLMFYAPYKTAKDVGYESVSPTMVPYLTGSGIGPESLLVVAAEKPSQGDSSGDSHKH
Ga0187871_102248162	3300018042	Peatland	FYAPNKTANDVGYDSVSPTMVPYLTGSGIGPESLLVVAAEKPSQGDSAGESHKH
Ga0187887_104661562	3300018043	Peatland	YMMSNENFVYNNVSGKSGFVPPHLMFYAPNKTAKDVGYESISPTMVPYLTGSTIGPETLLVVEAEKPSQGDSAGESHKH
Ga0187890_105424611	3300018044	Peatland	PHLMFYAPYKTAKDVGYESVSPTMVPYLTGSGVGPESLLVVAAEKPSQGGSSEDSHKH
Ga0187890_107364831	3300018044	Peatland	FYAPNKTAKDVGYESISPTMVPHLTGSTIGPETLLVVEAEKPSQDSSSGDSHKH
Ga0210407_111938761	3300020579	Soil	FYDSDAKQWGAVPPHMMFYAPNKTAKDVGYEAISSTMVPKLTGDGPEALIVVFAKKPSQDSSSADSHKH
Ga0210401_108783881	3300020583	Soil	NENYVYNSESKKSGFVPPHLMFYAPYKTAKDVGYESVSPIMVPYLTGSGVGPESLLVVAADKPSQDGSSGDSHKH
Ga0210401_116173761	3300020583	Soil	PPHLIFYAPYKTAKDLGYEAISPTMVPYLTYPGPEGLIVVMAKKPAQDSSSGDSHNH
Ga0210396_100738105	3300021180	Soil	DAKQWGAVPPHLMFYAPYKTAKDAGYESVSPTMVPHITGDGPETLMVVFAKKPPEDGSSGDSHKH
Ga0210396_101294881	3300021180	Soil	YMMSNENCFYDSDAKQWGVVPPHLMFYAPYKTAKDLGYEAISPTMVPYLTYPGPEGLIVVMAKKPAQDSSSGDSHKH
Ga0210393_100403191	3300021401	Soil	VYNSESKKSSFVPPHLMFYAPYKTAKDVGYESVSPVMVPYLTGSGVGPESLLVVAADKPSQDGSSGDSHKH
Ga0210393_101106571	3300021401	Soil	MEFKCPQSGFVPPHLMFYAPYKTAKDVGYESVSPIMVPYLTGCGVGPESLLVVAADKPSQDGSSGDSHKH
Ga0210393_102741494	3300021401	Soil	TAKDAGYESISPTMVPFMTGDGPETLMIVMAKKPPQATSSDDSHKH
Ga0210385_100200004	3300021402	Soil	QSGFVPPHLMFYAPYKTAKDVGYESVSPTMMPYLTEPGGPEALIVVAVPQDSSSSSDDSHKH
Ga0210397_112148422	3300021403	Soil	PHLMFYAPYKTAKDVGYESVSPIMVPYLTGSGVGPESLLVVAADKPSQDGSSGDSHKH
Ga0210387_101506504	3300021405	Soil	MFYAPNKTAQDVGYESVSPTMVPFLTTGSGIGAESLLVVLAKKPSQGDSTGDSHKH
Ga0210386_103403693	3300021406	Soil	VPPHLMFYAPNKTAKDVGYESVSPTMVPYLTGSGVGPESLLVVTAEKPSQGDSSGDSHKH
Ga0210391_114972632	3300021433	Soil	FKVPGPGFLYMMSSENYVYDSVSKQSGFVPPHLMFYAPYKTAKDVGYESVSPTMMPYLTEPGGPEALIVVAVPQDSSSSSDDSHKH
Ga0210398_101106803	3300021477	Soil	RFKVPGPGFLFMMSNENYVYDSESKKSGFVPPHLMFYAPNKTAKDVGYESVSPTMVPYLTGSGVGPESLLVVTAEKPSQGDSASDSHKH
Ga0224541_10187421	3300022521	Soil	YAPYKTAKDVGYESVSPTMVPYLTGSGVGPESLLVVAADKPSQGDSTGDSHKH
Ga0242661_11555891	3300022717	Soil	FLYMMSNENYFYDSDAKQWGVVPPYLMFYAPYKTAKDLGYEAISPTMVPYLTYPGPEGLIVVMAKKPAQDSSSGDSHKH
Ga0224549_10594271	3300022840	Soil	YVYDSQSGKSGFVPPHLMFYAPYKTAKDVGYESVSPTMVPYLTGSGVGPESLLVVTAEKPSQSDSSGSSHKH
Ga0208193_10058165	3300025463	Peatland	MMSNENYVYNSDSKKSGFVPPHLMFYAPYKTAKDVGYESVSPIMVPYLTGSGVGPEALLVVAADKPSQDGSSSDSHKH
Ga0208099_10632451	3300027096	Forest Soil	NSESKKSGFVPPHLMFYAPYKTAKDVGYESVSPKMVPYLTGSGVGPESLLVVVADKPSQDGSSGDSHKH
Ga0209421_11028082	3300027432	Forest Soil	GFLYMMSNEDYIYDSESKESGFVPPHLMFYAPYKTAKDVGYESVSPTMVPYLTGNGVGPESLLVVAAKKPPQDSSSGDSHKH
Ga0209008_11221971	3300027545	Forest Soil	FKAPGPGFLYMMSNENYVYDSESKESSCVPPHLMFYAPNKTAQDVGYESVSPTMVPFLTTGSGIGAESLLVVLAKKPSQADSTGDSHKH
Ga0209115_10335993	3300027567	Forest Soil	YAPYKTAKDVGYDSISPTMVPYLTYPGPQGLLVVMVKKPPEDGSSGDSHKH
Ga0209116_11337532	3300027590	Forest Soil	YVYDPDAKQSGFVPPHLMFYTAYMTVKDLGYESISPTMVPYLVQPGEPEALIPIAVRRPAQDSSSGDSHKH
Ga0209221_10090534	3300027609	Forest Soil	MSNENYVYNSQSKESGFVPPHLMFYAPYKTAKDLGYESISPTMVPYLTYPGPEGLMVVAAKKPPEDSSSGDAHKH
Ga0209333_10032291	3300027676	Forest Soil	SVSKQSGFVPPHLMFYAPYKTAKDVGYESVSPTMMPYLTEPGGPEALIVVAVPQDSSSSSDDSHKH
Ga0209530_10465732	3300027692	Forest Soil	LMFYAPYKTAKDVGYESVSPKMVPYLTGSGVGPESLLVVAADKPSQDGSSGDSHKH
Ga0209448_100764553	3300027783	Bog Forest Soil	GFLYMMSSENYVYDSNSKESGFVPPHLMFYAPYRTAKDLGYESISPTMVPYLTLPGEPEALIVVPARRPPQDSSSGDSHKH
Ga0209274_102723001	3300027853	Soil	EHKVPGPGFLFMMSSENYVYDSESKKSGFVPPHLMFYAPNKTAKDVGYESVSPTMVPHLTGSGIGPESLLVVAAEKPSQDGSSGDSHKH
Ga0209274_103052101	3300027853	Soil	PGPGFLYMMSNENYVYDSESRKSGFVLPHLMFYAPYKTAKDVGYESVSPTMVPYLTGSGVGPESLLVVAAEKPKQDSSSGDSHKHSGRLW
Ga0209169_100602082	3300027879	Soil	FVPPHLMFYAPYKTAKDVGYESVSPIMVPYLTGSGVGPESLLVVTADKPSQAGSSGDSHK
Ga0209169_101462312	3300027879	Soil	AVNRFMMSNENYVYNSESKKSGFVPPHLMFYAPYKTAKDVGYESVSPKMVPYLTGSGVGPESLLVVVADKPSQDGPSGDSHKH
Ga0209169_101610252	3300027879	Soil	PGPGFLYMMSNENYVYDDQSKESGIVPPHLMFYAPYKTAKDLGYESISPTMVPHLTQPGKAEALIVVAAKKPPQDSSPEDSHKH
Ga0209624_100471785	3300027895	Forest Soil	MMSNENYVYKSESKKSGFVPPHLMFYAPYKTAKDVGYESVSPKMVPYLTGSGVGPESLLVVVADKPSQDGPSGDSHKH
Ga0209624_103913741	3300027895	Forest Soil	MSDENYVYDDQSKQSGFVPPHLMFYAPYKTAKDVGYDSISPTMVPYLTYPGPQGLLVVMVKKPPEDGSSGDSHKH
Ga0265358_1053332	3300028010	Rhizosphere	PPHLMFYAPNKTAKDVGYESISPTMVPHLTGSGVGPESLLVVAARKPAEDSSSGDSHKH
Ga0302152_101898101	3300028572	Bog	VPGPGFLYMMSNENFVYNNVSGKSGFVAPHLMFYAPNKTANDVGYDSVSPTMVPYLTGSGIGPESLLVVAAEKPSQGDSAGESHKH
Ga0302301_100088113	3300028731	Palsa	MMSNENFVYNNVSGKSGFVAPHLMFYAPNKTANDVGYDSVSPTMVPYLTGSGIGPESLLVVAAEKPSQGDSAGESHKH
Ga0302234_104093622	3300028773	Palsa	SNENYVYDSESKKSGFVPPHLMFYAPYKTAKDVGYESVSPTMVPHLTGSGIGPESLLVVMAEKPSQGDSSGGSHKH
Ga0302231_100350751	3300028775	Palsa	GFLYMMSNENFVYNNVSGKSGFVAPHLMFYAPNKTANDVGYDSVSPTMVPYLTGSGIGPESLLVVAAEKPSQGDSAGESHKH
Ga0302223_100022859	3300028781	Palsa	RFKVPGPGFLYMMSNENFVYNNVSGKSGFVAPHLMFYAPNKTANDVGYDSVSPTMVPYLTGSGIGPESLLVVAAEKPSQGDSAGESHKH
Ga0302189_102641171	3300028788	Bog	NNVSGKSGFVPPHLMFYAPNKTAKDVGYESISPTMVPYLTGSTIGPESLLVVAAEKPSQGDSTGDSHKH
Ga0302227_100637211	3300028795	Palsa	YKTAKDVGYESVSPTMVPYLTGSGVGPESLLVVAADKPSQGDSTGDSHKH
Ga0302226_100058141	3300028801	Palsa	GPGFLYMMSNENYVYDSQSKESGFVPPHLMFYAPYKTAKDVGYESISPTMVPYLTQPGDPEGLIVVAAKKPPQDSSSGDSHKH
Ga0302228_101555091	3300028808	Palsa	SKKSGFVPPHLMFYAPYKTAKDVGYESVSPTMVPYLTGSGVGPESLLVVAADKPSQGDSTGDSHKH
Ga0302268_10707891	3300028854	Bog	MMSNENFVYNNVSGKSGFVAPHLMFYAPNKTAKDVGYESVSPTMLPYLTGSGIGPENLLVVAAEKPSQGDSAGESHKH
Ga0308309_100264374	3300028906	Soil	IAKGYKDGRFKTPGSGFLLMMSSENYVYDSESKQSGFVPPHLMFYAPYKTAKDLGYESISPTMVPYLTGSGDPVALIVVAVPRRESPSDDSHKH
Ga0308309_111244271	3300028906	Soil	PPHLMFYAPYKTAKDVGYESVSPTMMPYLTEPGGPEALIVVAVPQDSSSSSDDSHKH
Ga0311368_100661222	3300029882	Palsa	RFKVPGPGFLYMMSNENFVYNNVSGKSGFVPPHLMFYAPNKTAKDVGYESVSPTMVPYLTGSGIGPESLLVVEAEKPSQGDFTGDSHKH
Ga0311352_107670831	3300029944	Palsa	RFKAPGPGFLYMMSNENYVYDSESKKSGFVPPHLMFYAPYKTAKDVGYESVSPTMVPHLTGSGIGPESLLVVMAEKPSQGDSSGGSHKH
Ga0311352_108806501	3300029944	Palsa	KVPGPGFLYMMSNENYVYNSESKKSGFVPPHLMFYAPYKTAKDVGYESVSPIMVPYLTGSGVGPESLLVVAADKPSQDGSSGDSHKH
Ga0311330_104280352	3300029945	Bog	NFVYNNVSGKSGFVPPHLMFYAPNKTAKDVGYESISPTMVPYLTGSTIGPESLLVVAAEKPSQGDSTGDSHKH
Ga0311371_111777901	3300029951	Palsa	YDSESKKSGFVPPHLMFYAPYKTAKDVGYESVSPTMVPHLTGSGVGPESLLVVMAEKPSQSDSSGGSHKH
Ga0302150_103176712	3300029956	Bog	TAKDVGYESVSPTMLPYLTGSGIGPENLLVVAAEKPSQGDSAGESHKH
Ga0302277_10190107	3300029982	Bog	GPGFLYMMSNENFVYNNVSGKSGFVAPHLMFYAPNKTAKDVGYESVSPTMLPYLTGSGIGPENLLVVAAEKPSQGDSAGESHKH
Ga0302304_101393282	3300029993	Palsa	ENYVYESESKKSGFVPPHLMFYAPYKTAKDVGYESVSPTMVPHLTGSGIGPESLLVVMAEKPSQGDSSGGSHKH
Ga0302304_102438371	3300029993	Palsa	KKSGFVPPHLMFYAPYKTAKDVGYESVSPTMVPHLTGSGVGPESLLVVAVEKPSQDSSSGGSHKH
Ga0311339_103461852	3300029999	Palsa	YKTAKDVGYESVSPIMVPYLTGSGVGPESLLVVAADKPSQDGSSGDSHKH
Ga0311339_112660161	3300029999	Palsa	MMSNENYVYDSESKQSGFVPPHLMFYAPNKIPQDVGYESVSPGMVPYLTRSSGIGAESLLVVFAKKPSQDSSPGASHKH
Ga0311338_100928566	3300030007	Palsa	GRFKVPGPGFLYMMSNENFVYNNVSGKSGFVAPHLMFYAPNKTAKDVGYESVSPTMLPYLTGSGIGPENLLVVAAEKPSQGDSAGESHKH
Ga0302176_102632922	3300030057	Palsa	YNNVSGKSGFVAPHLMFYAPNKTAKDVGYESVSPTMLPYLTGSGIGPENLLVVAAEKPSQGDSAGESHKH
Ga0302179_100431452	3300030058	Palsa	ENYVYNAESKKSGFVPPHLMFYAPYKTAKDVGYESVSPIMVPYLTGSGVGPESLLVVAADKPSQDGSSGDSHKH
Ga0302179_101904581	3300030058	Palsa	QSRESGIVPPHLMFYAPYKTAKDLGYESISPTMVPHLTQPGKAEGLIVVAAKKPPQDSSPEDSHKH
Ga0302179_102885821	3300030058	Palsa	SGKSGFVAPHLMFYAPNKTAKDVGYESVSPTMLPYLTGSGIGPENLLVVAAEKPSQGDSAGESHKH
Ga0302179_104918992	3300030058	Palsa	SKKSGFVPPHLMFYAPYKTAKDVGYEAVSPTMVPYLTGSGVGPESLLVVAADKPSEDDFTGDSHKH
Ga0302179_105124561	3300030058	Palsa	MSNENYVYNSESKKSGFVPPHLMFYAPYKTAKDVGYESVSPTMVPYLTGSGVGPESLLVVTAEKPSQSDSSGSSHKH
Ga0311353_106930501	3300030399	Palsa	LMFYAPYKTAKDVGYEAVSPTMVPYLTGSGVGPESLLVVVADKPSQDGSSGDSHKH
Ga0311370_109674081	3300030503	Palsa	GFLYMMSNENYVYDSESKKSGFVPPHLMFYAPYKTAKDVGYESVSPTMVPHLTGSGIGPESLLVVMAEKPSQGDSSGGSHKH
Ga0311370_119638592	3300030503	Palsa	YTTAKDVGYEAVSPTMVPYLTGSGVGPESLLVVVADKPSQDGSSGDSHKH
Ga0311370_123346761	3300030503	Palsa	VYNAESKKSGFVPPHLMFYAPYKTAKDVGYESVSPIMVPYLTGSGVGPESLLVVAADKPSQDGSSGDSHKH
Ga0311372_102710131	3300030520	Palsa	AESKKSGFVPPHLMFYAPYKTAKDVGYESVSPIMVPYLTGSGVGPESLLVVAADKPSQDGSSGDSHKH
Ga0311372_126285191	3300030520	Palsa	MMSNENYVYDSESKKSGFVPPHLMFYAPYKTAKDVGYESVSPIMVPYLTGSGVGPESLLVVFADKPSQDGSSGDSHKH
Ga0311357_100499562	3300030524	Palsa	YAPYKTAKDVGYEAVSPTMVPYLTGSGVGPESLLVVVAGKPSQDGSSGDSHKH
Ga0311357_107483322	3300030524	Palsa	SESKKSGFVPPHLMFYAPYKTAKDVGYESVSPTMVPYLTGSGVGPESLLVVAVEKPSQDSSSGGSHKH
Ga0311357_118486501	3300030524	Palsa	KKSGFVPPHLMFYAPYKTAKDIGYESVSPTMVPYLTGSGVGPESLLVVDAEKPSQDASTGESHKH
Ga0311355_107220331	3300030580	Palsa	GAVPPHVMFYAPNKTVKDVGYESKSPTMVPYLTGDGPEALMVVMAKKPAEDSFSGDSHKH
Ga0311356_101132832	3300030617	Palsa	NSESKKSGFVPPHLMFYAPYKTAKDVGYEAVSPTMVPYLTGSGVGPESLLVVVAGKPSQDGSSGDSHKH
Ga0311354_106003001	3300030618	Palsa	VPPHLMFYAPYKTAKDIGYESVSPTMVPYLTGSGVGPESLLVVDAEKPSQDASTGESHKH
Ga0302316_103287532	3300030646	Palsa	KSGFVAPHLMFYAPNKTAKDVGYESVSPTMLPYLTGSGIGPENLLVVAAEKPSQGDSAGESHKH
Ga0302310_102011082	3300030737	Palsa	YVYNSESRKSGFVPPHLMFYAPYKTAKDVGYESVSPTMVPHLTGSGVGPESLLVVAVEKPSQDSSSGGSHKH
Ga0302311_100297501	3300030739	Palsa	GPGFLYMMSNENFVYNNVSGKSGFVAPHLMFYAPNKTANDVGYDSVSPTMVPYLTGSGIGPESLLVVAAEKPSQGDSAGESHKH
Ga0302311_103030991	3300030739	Palsa	GPGFLYMMSNENFVYDSESKKSGFVPPHLMFYAPNKTANDVGYDSVSPTMVPHLTGSGIGPESLLVVMAEKPSQGDSSGGYHKH
Ga0265762_10978101	3300030760	Soil	PHLMFYAPNKTAKDLGYESISPTTVPYLTNPGPEGLLVVFVKRPPQDSSSGDSHKH
Ga0302308_100736951	3300031027	Palsa	VAPHLMFYAPNKTANDVGYDSVSPTMVPYLTGSGIGPESLLVVAAEKPSQGDSAGESHKH
Ga0302180_101448161	3300031028	Palsa	SESKKSGFVPPHLMFYAPYKTAKDVGYESVSPIMVPYLTGSGVGPESLLVVAADKPSQDGSSGDSHKH
Ga0265754_10130642	3300031040	Soil	FMMSNENYVYDSESKESGFVPPHLMFYAPNKTAKDVGYESVSSTMVPHLTGSGVGPESLLVVAAKKPAEDSSSGDSHKH
Ga0302325_132790662	3300031234	Palsa	GFLYMMSDENYVYDSQSKKSGFVPPHLMFYAPYKTAKDVGYESISPTMVPYLTQAGEPEGLIVVEAKKPPLDSSSSDSHKH
Ga0310686_1071477126	3300031708	Soil	MFYAPYKTAKDVGYEVVSPTMVPYLTGSGVGPESLLVVAADKPTHDGSSGDSHKH
Ga0310686_1077649151	3300031708	Soil	NKTAQDVGYESVSPTMVPFLTRGSGIGAESLLVVLAKKPSQGDSTGDSHKH
Ga0310686_1144590272	3300031708	Soil	GFLYMMSNDNYVYDSQSKESGFVPPHVMFYAPYKTAKDVGYESISPTMVPYLTGDGGPEGLLVVAAKKPSQDSSSGDSHKH
Ga0310686_1148151593	3300031708	Soil	MSDENYVYDSQSKESGFVPPHLMFYAPYKTAKDVGYESIKPTMVPYLTYPGPEGLIVVAAKKPQGDSTGDSHNH
Ga0302315_106230571	3300031837	Palsa	MFYAPNKTANDVGYDSVSPTMVPYLTGSGIGPESLLVVAAEKPSQGDSAGESHKH
Ga0348332_116871011	3300032515	Plant Litter	SGFVPPHLMFYAPYKTAKDVGYESVSPTMVPYLTGSGVGPESLLVVAAKKPAEDSSSGDSHKH
Ga0335074_110917991	3300032895	Soil	FLYMMSSENYVYDSESKKSGFVPPHLMFYAPYKTAKDVGYEKVSPTMVPYLTGSGIGPESLLVVAAEKPSEDNSSGDSHKD
Ga0335072_106201511	3300032898	Soil	YDSESKKSGFVPPHLMFYAPYKTAKDVGYEKVSPTMVPYLTGSGIGPESLLVVAAEKPSEDNSSGDSHKD
Ga0334854_176075_317_478	3300033829	Soil	MFYAPYKTAKDLGYESISPTMVPHLTSSGPEGLMVVVTKKSAQDLSSGDSHKH
Ga0370515_0355802_337_561	3300034163	Untreated Peat Soil	MMSSENYVYNSESKKSSFVPPHLMFYAPYKTAKDVGYESVSPTMVPYLTGSGVGPESLLVVAADKPSQGDSHKH
Ga0370515_0419556_284_520	3300034163	Untreated Peat Soil	MMSNDNYVYNSESKKSGFVPPHLMFYAPYKTAKDVGYESVSPIMVPYLTGSGVGPESLLVVAADKPSQDGSSGDSHKH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F062022

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences