Metagenome / Metatranscriptome Family F061966

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F061966
Family Type	Metagenome / Metatranscriptome
Number of Sequences	131
Average Sequence Length	108 residues
Representative Sequence	VVELPGDAFKVSHDGRRATLEAKDVCVLDSFQFGGPLTVPASVSFKVRWEATGPRERRGSGSTVPATDPAAFLGRFATARSTGSFSGSEVGFSFSGRGDTDGTFAELGPERNGVFL
Number of Associated Samples	97
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	21.37 %
% of genes near scaffold ends (potentially truncated)	41.98 %
% of genes from short scaffolds (< 2000 bps)	83.97 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.68

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (76.336 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (23.664 % of family members)
Environment Ontology (ENVO)	Unclassified (30.534 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (39.695 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 2.08% β-sheet: 45.83% Coil/Unstructured: 52.08%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.68
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.68
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF10518	TAT_signal	6.87
PF09107	SelB-wing_3	4.58
PF00665	rve	2.29
PF00106	adh_short	1.53
PF08281	Sigma70_r4_2	1.53
PF12728	HTH_17	1.53
PF01547	SBP_bac_1	1.53
PF02687	FtsX	1.53
PF12974	Phosphonate-bd	1.53
PF13936	HTH_38	0.76
PF13242	Hydrolase_like	0.76
PF01872	RibD_C	0.76
PF01625	PMSR	0.76
PF12840	HTH_20	0.76
PF07730	HisKA_3	0.76
PF12697	Abhydrolase_6	0.76
PF13193	AMP-binding_C	0.76
PF10604	Polyketide_cyc2	0.76
PF13419	HAD_2	0.76
PF04672	Methyltransf_19	0.76
PF04909	Amidohydro_2	0.76
PF02911	Formyl_trans_C	0.76
PF12852	Cupin_6	0.76
PF06271	RDD	0.76
PF02195	ParBc	0.76
PF00440	TetR_N	0.76
PF13474	SnoaL_3	0.76
PF00196	GerE	0.76
PF10110	GPDPase_memb	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	2.29
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	2.29
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	2.29
COG4584	Transposase	Mobilome: prophages, transposons [X]	2.29
COG0223	Methionyl-tRNA formyltransferase	Translation, ribosomal structure and biogenesis [J]	0.76
COG0225	Peptide methionine sulfoxide reductase MsrA	Posttranslational modification, protein turnover, chaperones [O]	0.76
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.76
COG1714	Uncharacterized membrane protein YckC, RDD family	Function unknown [S]	0.76
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.76
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.76
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.76
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.76
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	76.34 %
Unclassified	root	N/A	23.66 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	76.34 %
Unclassified	root	N/A	23.66 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	76.34 %
Unclassified	root	N/A	23.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.66 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	22.90 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	12.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.66 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	22.90 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	12.21 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.66 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	22.90 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8.40 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.66 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	22.90 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	1.53 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1.53 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.76 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.66 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	22.90 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1.53 %
Nocardiopsaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	0.76 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.76 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.76 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.66 %
unclassified Luteitalea	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea	22.90 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1.53 %
Streptomonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Streptomonospora	0.76 %
Modestobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Modestobacter	0.76 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.76 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.66 %
Luteitalea sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	22.90 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1.53 %
Streptomonospora litoralis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Streptomonospora → Streptomonospora litoralis	0.76 %
Modestobacter altitudinis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Modestobacter → Modestobacter altitudinis	0.76 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.76 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000550\|F24TB_13817405	Not Available	600	Open in IMG/M
3300000891\|JGI10214J12806_12573574	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300000956\|JGI10216J12902_103939211	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	837	Open in IMG/M
3300000956\|JGI10216J12902_105951841	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300000956\|JGI10216J12902_118458481	All Organisms → cellular organisms → Bacteria	913	Open in IMG/M
3300003373\|JGI25407J50210_10012622	All Organisms → cellular organisms → Bacteria	2167	Open in IMG/M
3300003373\|JGI25407J50210_10013212	All Organisms → cellular organisms → Bacteria	2122	Open in IMG/M
3300003373\|JGI25407J50210_10024804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1555	Open in IMG/M
3300003373\|JGI25407J50210_10055963	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	995	Open in IMG/M
3300004463\|Ga0063356_103561550	Not Available	671	Open in IMG/M
3300004479\|Ga0062595_100982399	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	723	Open in IMG/M
3300004801\|Ga0058860_10017311	Not Available	575	Open in IMG/M
3300005332\|Ga0066388_101216632	Not Available	1289	Open in IMG/M
3300005347\|Ga0070668_101761664	Not Available	569	Open in IMG/M
3300005719\|Ga0068861_100277798	All Organisms → cellular organisms → Bacteria	1441	Open in IMG/M
3300005842\|Ga0068858_101971080	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300005937\|Ga0081455_10021505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	6051	Open in IMG/M
3300005937\|Ga0081455_10036053	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4410	Open in IMG/M
3300005981\|Ga0081538_10003620	All Organisms → cellular organisms → Bacteria	14523	Open in IMG/M
3300005981\|Ga0081538_10006485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	10298	Open in IMG/M
3300005981\|Ga0081538_10011699	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7089	Open in IMG/M
3300005981\|Ga0081538_10040988	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2945	Open in IMG/M
3300005981\|Ga0081538_10106763	All Organisms → cellular organisms → Bacteria	1389	Open in IMG/M
3300005981\|Ga0081538_10132366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Modestobacter → Modestobacter altitudinis	1169	Open in IMG/M
3300005985\|Ga0081539_10070666	All Organisms → cellular organisms → Bacteria	1873	Open in IMG/M
3300006049\|Ga0075417_10019349	All Organisms → cellular organisms → Bacteria	2692	Open in IMG/M
3300006194\|Ga0075427_10086932	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300006196\|Ga0075422_10127757	All Organisms → cellular organisms → Bacteria	998	Open in IMG/M
3300006845\|Ga0075421_100787813	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1096	Open in IMG/M
3300006845\|Ga0075421_101160871	All Organisms → cellular organisms → Bacteria → Terrabacteria group	864	Open in IMG/M
3300006847\|Ga0075431_100719052	All Organisms → cellular organisms → Bacteria	975	Open in IMG/M
3300006969\|Ga0075419_10000429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	26039	Open in IMG/M
3300007790\|Ga0105679_10825903	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1279	Open in IMG/M
3300009100\|Ga0075418_10239853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1930	Open in IMG/M
3300009147\|Ga0114129_10489180	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1609	Open in IMG/M
3300009157\|Ga0105092_10756436	Not Available	567	Open in IMG/M
3300009553\|Ga0105249_11618389	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300009807\|Ga0105061_1002883	All Organisms → cellular organisms → Bacteria	1954	Open in IMG/M
3300009815\|Ga0105070_1062903	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300009815\|Ga0105070_1124671	Not Available	520	Open in IMG/M
3300009817\|Ga0105062_1030277	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	944	Open in IMG/M
3300009822\|Ga0105066_1016714	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1418	Open in IMG/M
3300009840\|Ga0126313_10013739	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	5216	Open in IMG/M
3300009840\|Ga0126313_10197427	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1543	Open in IMG/M
3300009840\|Ga0126313_10471002	All Organisms → cellular organisms → Bacteria	1003	Open in IMG/M
3300010041\|Ga0126312_10073170	All Organisms → cellular organisms → Bacteria	2311	Open in IMG/M
3300010041\|Ga0126312_10985604	Not Available	616	Open in IMG/M
3300010045\|Ga0126311_11755050	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300010145\|Ga0126321_1317023	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300010145\|Ga0126321_1358973	Not Available	763	Open in IMG/M
3300010145\|Ga0126321_1378903	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	887	Open in IMG/M
3300010166\|Ga0126306_10049669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2901	Open in IMG/M
3300010999\|Ga0138505_100018301	All Organisms → cellular organisms → Bacteria	878	Open in IMG/M
3300012021\|Ga0120192_10079807	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300012212\|Ga0150985_103345453	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1019	Open in IMG/M
3300012212\|Ga0150985_110971721	Not Available	513	Open in IMG/M
3300012212\|Ga0150985_113687763	Not Available	582	Open in IMG/M
3300012212\|Ga0150985_114928173	Not Available	595	Open in IMG/M
3300012212\|Ga0150985_118850714	Not Available	726	Open in IMG/M
3300012212\|Ga0150985_122076241	Not Available	502	Open in IMG/M
3300012355\|Ga0137369_10102536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2345	Open in IMG/M
3300012360\|Ga0137375_11183870	Not Available	586	Open in IMG/M
3300012469\|Ga0150984_102060099	Not Available	559	Open in IMG/M
3300012469\|Ga0150984_107300871	All Organisms → cellular organisms → Bacteria	1012	Open in IMG/M
3300012469\|Ga0150984_109215052	All Organisms → cellular organisms → Bacteria	1796	Open in IMG/M
3300012469\|Ga0150984_119640409	Not Available	932	Open in IMG/M
3300014487\|Ga0182000_10196258	All Organisms → cellular organisms → Bacteria	769	Open in IMG/M
3300015371\|Ga0132258_10365692	All Organisms → cellular organisms → Bacteria	3573	Open in IMG/M
3300015373\|Ga0132257_102646598	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300018073\|Ga0184624_10544781	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300018081\|Ga0184625_10393451	Not Available	716	Open in IMG/M
3300018081\|Ga0184625_10438910	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300018081\|Ga0184625_10512463	Not Available	603	Open in IMG/M
3300018465\|Ga0190269_10446509	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
3300018466\|Ga0190268_11475098	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300018476\|Ga0190274_10016328	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	4756	Open in IMG/M
3300018476\|Ga0190274_10078129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2533	Open in IMG/M
3300019767\|Ga0190267_11541701	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300022195\|Ga0222625_1229021	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	863	Open in IMG/M
3300025924\|Ga0207694_11710389	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	529	Open in IMG/M
3300025927\|Ga0207687_10280944	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1334	Open in IMG/M
3300025961\|Ga0207712_11582556	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	587	Open in IMG/M
3300026118\|Ga0207675_100294194	All Organisms → cellular organisms → Bacteria	1580	Open in IMG/M
3300027056\|Ga0209879_1014844	All Organisms → cellular organisms → Bacteria	1283	Open in IMG/M
3300027209\|Ga0209875_1019141	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300027379\|Ga0209842_1069040	Not Available	624	Open in IMG/M
3300027490\|Ga0209899_1075594	Not Available	668	Open in IMG/M
3300027561\|Ga0209887_1033860	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1157	Open in IMG/M
3300027577\|Ga0209874_1057489	All Organisms → cellular organisms → Bacteria	994	Open in IMG/M
3300027750\|Ga0209461_10018660	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1240	Open in IMG/M
3300027873\|Ga0209814_10011789	All Organisms → cellular organisms → Bacteria	3447	Open in IMG/M
3300027957\|Ga0209857_1049694	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	740	Open in IMG/M
3300028709\|Ga0307279_10093314	Not Available	552	Open in IMG/M
3300028722\|Ga0307319_10138943	All Organisms → cellular organisms → Bacteria	786	Open in IMG/M
3300028744\|Ga0307318_10197942	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300028754\|Ga0307297_10339746	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300028771\|Ga0307320_10123668	All Organisms → cellular organisms → Bacteria	992	Open in IMG/M
3300028771\|Ga0307320_10224395	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300028778\|Ga0307288_10133187	All Organisms → cellular organisms → Bacteria	926	Open in IMG/M
3300028796\|Ga0307287_10132300	All Organisms → cellular organisms → Bacteria	946	Open in IMG/M
3300028799\|Ga0307284_10004314	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3908	Open in IMG/M
3300028811\|Ga0307292_10128962	All Organisms → cellular organisms → Bacteria	1011	Open in IMG/M
3300028814\|Ga0307302_10152105	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1121	Open in IMG/M
3300028814\|Ga0307302_10159896	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1093	Open in IMG/M
3300028824\|Ga0307310_10039318	Not Available	1936	Open in IMG/M
3300028872\|Ga0307314_10153922	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300028876\|Ga0307286_10186670	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300028878\|Ga0307278_10040557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Streptomonospora → Streptomonospora litoralis	2118	Open in IMG/M
3300028881\|Ga0307277_10189447	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	900	Open in IMG/M
3300028885\|Ga0307304_10213577	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	829	Open in IMG/M
3300030510\|Ga0268243_1074092	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	765	Open in IMG/M
3300030990\|Ga0308178_1028046	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	943	Open in IMG/M
3300030993\|Ga0308190_1061731	Not Available	748	Open in IMG/M
3300031082\|Ga0308192_1040268	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	675	Open in IMG/M
3300031092\|Ga0308204_10178685	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300031094\|Ga0308199_1103530	Not Available	630	Open in IMG/M
3300031099\|Ga0308181_1086527	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	657	Open in IMG/M
3300031114\|Ga0308187_10071433	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1012	Open in IMG/M
3300031421\|Ga0308194_10079426	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	904	Open in IMG/M
3300031548\|Ga0307408_100490301	All Organisms → cellular organisms → Bacteria	1074	Open in IMG/M
3300031548\|Ga0307408_102358025	Not Available	516	Open in IMG/M
3300031731\|Ga0307405_10201329	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1446	Open in IMG/M
3300031824\|Ga0307413_10301521	Not Available	1215	Open in IMG/M
3300031852\|Ga0307410_10301720	All Organisms → cellular organisms → Bacteria	1264	Open in IMG/M
3300031903\|Ga0307407_10993225	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300031995\|Ga0307409_101390735	Not Available	728	Open in IMG/M
3300032002\|Ga0307416_100415913	Not Available	1387	Open in IMG/M
3300032002\|Ga0307416_101025598	Not Available	928	Open in IMG/M
3300032126\|Ga0307415_100078045	All Organisms → cellular organisms → Bacteria	2354	Open in IMG/M
3300032126\|Ga0307415_100258232	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1420	Open in IMG/M
3300034174\|Ga0334932_088224	Not Available	541	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	56.49%
Host-Associated	Host-Associated	43.51%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	49.62%
Plants	Host-Associated → Plants	42.75%
Aquatic	Environmental → Aquatic	6.87%
Human	Host-Associated → Human	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	48.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere	22.90%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.45%
Roots	Host-Associated → Plants → Roots	7.63%
Freshwater	Environmental → Aquatic → Freshwater	3.82%
Sediment	Environmental → Aquatic → Sediment	3.05%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.76%
Digestive System	Host-Associated → Human → Digestive System	0.76%
Phyllosphere	Host-Associated → Plants → Phyllosphere	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	37.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	19.08%
Sand	Environmental → Terrestrial → Soil → Sand	9.92%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	7.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	6.11%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.34%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.82%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.05%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	2.29%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.53%
Loam	Environmental → Terrestrial → Soil → Loam	1.53%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.76%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.76%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	19.08%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	9.16%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	7.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	6.11%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.34%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.82%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.05%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.05%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	2.29%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.53%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.76%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	0.76%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.76%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.76%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.76%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.76%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	23.66%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	9.16%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	8.40%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	7.63%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.63%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	5.34%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	4.58%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.05%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	3.05%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	2.29%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	2.29%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.53%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.53%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.53%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.53%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.76%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.76%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.76%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.76%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.76%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.76%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.76%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.76%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003373	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004801	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006194	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007790	Microbial communities of desert soil contaminated with blood from dead anthrax infected zebra in Etosha National Park, Namibia. Combined Assembly of 14 sequencing projects	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009807	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_0_10	Environmental	Open in IMG/M
3300009815	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10	Environmental	Open in IMG/M
3300009817	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20	Environmental	Open in IMG/M
3300009822	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010145	Soil microbial communities from Hawaii, USA to study soil gas exchange rates - KP-HI-INT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010999	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t3i015	Environmental	Open in IMG/M
3300012021	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - T1	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027056	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027209	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_0_10 (SPAdes)	Environmental	Open in IMG/M
3300027379	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20 (SPAdes)	Environmental	Open in IMG/M
3300027490	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10 (SPAdes)	Environmental	Open in IMG/M
3300027561	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027577	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027750	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027957	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20 (SPAdes)	Environmental	Open in IMG/M
3300028709	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_118	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028872	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300030510	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG (v2)	Environmental	Open in IMG/M
3300030990	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030993	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031082	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_193 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031094	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_203 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031099	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_152 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300034174	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 28HNS	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F24TB_138174052	3300000550	Soil	VSFKVRWEATGPRERRGKGLDVPPTDPAAFLGRFATARSTGVFSGSEVGFSFTGRGDTDGTFAELGPERNGTFLT*
JGI10214J12806_125735742	3300000891	Soil	VVELPDDSFRVSHDGRQATLEAKDVCVLDSFQIFGPTNVPASVSFKIRWEATSPRERRGKGSTVPATDPAAFLGRFATARSTGSFSGSQVGFSFRGRGDTDDTFAELGPERNGVFLS*
JGI10216J12902_1039392112	3300000956	Soil	LFWLVPIRSGAFTVSHDGRRATLEARHLPVIDSFQFGGPVTVPAEVSFRITWEAIGQPRRRGKGTTVPPTDPAAFVGRFARARSTASIQGSALGFSFHSRTATTNRGYALMGFERNGDAIDAP*
JGI10216J12902_1059518412	3300000956	Soil	VRWEATGPREIRGKGSAVPATDPAAFLGRFVEAKATGSFSGSEVGFSFKGRGDTDGTFAELGPERNGVFLP*
JGI10216J12902_1184584812	3300000956	Soil	VCVLNSFQFLGPTSIAASVSFTVRWQATGPRERRGSGTSVPATDPAAFLGRFAPARATGVFSGSEVGFSFAGRGDTDGTFAELGPERNGVFLA*
JGI25407J50210_100126221	3300003373	Tabebuia Heterophylla Rhizosphere	VSDDGRRATLEAKDVCLVNSFQFLGPNNVAARVSLKVGWEATGPAVRRGRADEVPPTDPAAFLGRIAPARSTAWFSGSHVGFSFKARGDTDRGHALLGRERNGAFLT*
JGI25407J50210_100132122	3300003373	Tabebuia Heterophylla Rhizosphere	VVELPGDAFKVSHDGRRATLEAKDVCVLDSFQFGGPVTIPASVSFKIQWEATGPRERRGSGADVPPTDPAAFLGRFASARSTGTFSGSEVGFSFKGRAGTEGGYAQLGPERNGAFLT*
JGI25407J50210_100248042	3300003373	Tabebuia Heterophylla Rhizosphere	VVELPRDAFRVSHDGRRATLEAEDVCVVDSFQFLGPNNVAARVSFEVRWEATGPAVRRGRGTEVPPTDPAAFLGRIAPARSVGRFSGSGVGFSFTGRGDTERGYALLGRERNGAFLG*
JGI25407J50210_100559632	3300003373	Tabebuia Heterophylla Rhizosphere	VPGQQLPVPRPNNVAAKVSLKVRWEATGPAVRRGRGGEVPPTDRAAFLGRIAPARSTAWFSGSHVGFSFRSNPGVSTDRGYALLGQERNGAFLT*
Ga0063356_1035615501	3300004463	Arabidopsis Thaliana Rhizosphere	LDSFQIFGPTNVPASVSFKIRWEATSPRERRGKGSTVPATDPAAFLGRFATARSTGSFSGSQVGFSFRGRGDTDDTFAELGPERNGVFLS*
Ga0062595_1009823992	3300004479	Soil	VVELPDDAFRVSHDGRQATLEAKDVCVLDSFQIFGPTNVPASVSFKIRWEATSPRERRGKGSTVPATDPAAFLGRFATARSTGSFSGSQVGFSFRGRGDTDDTFAELGPERNGVFLS*
Ga0058860_100173111	3300004801	Host-Associated	PQDAFKVSHDGRRATLEAHDVSVIDSFQFGGPNMVPATVSFTVKWEAVERRQPRGKGSTVPPTDPAAFLGSFARARSTASFSGSALGFSFKSQSANTNLGYAMMGRERNGVFLEG*
Ga0066388_1012166322	3300005332	Tropical Forest Soil	VVDNFVFFGPGAVPATVSVDLRWEATGPAADRGRGPGVPPTDPAAFLGQFAPARATGSCSGAGVGFAFRSDPGASTDRGYAQVGRERNGVFL*
Ga0070668_1017616642	3300005347	Switchgrass Rhizosphere	KVRWEATGPRERRGKGSAVPPTDPAAFLGRFATARSTGSFCGTEVGFSFTGRGDTAGRGYAQFGPEHNGVFLS*
Ga0068861_1002777981	3300005719	Switchgrass Rhizosphere	VVELPGDAFRVSHDGRRATLEAKDVCVLDSFQFGGPINVPARVSFKVRWEATGPRERRGKGSAVPPTDPAAFLGRFATARSTGSFCGTEVGFSFTGRGDTAGRGY
Ga0068858_1019710802	3300005842	Switchgrass Rhizosphere	SGLFWVVPIPQDAFKVSHDGRRATLEAHDVSVIDSFQFGGPNMVPATVSFTVKWQAIEHRQPRGKGSTVSPTDPAAFLGSFARARSTGSFSGSQLGFSFKSHAASTDLGYGLMGSERNGVFL*
Ga0081455_100215054	3300005937	Tabebuia Heterophylla Rhizosphere	VVELPGDAFRVSHDGRRATLEAEDVCVLDSFQFGGPVNVPAKVSFKVRWEATGPRERRGSGSDVPATDPGAFLGRFAAARSTGSFSGSEVGFSFTGRGDTDRGYAQFGPERNGVFLT*
Ga0081455_100360535	3300005937	Tabebuia Heterophylla Rhizosphere	VELPDDAFKVSHDGRRATLEAKDVCVLDSFQFGGPVTVPASVSFKIRWEATGRFERRGSGSDVPATDPAAFLGRFADARSTAIFSGFEVGFSFNGRAATTGGFAQLGPERNGVFLP*
Ga0081538_1000362017	3300005981	Tabebuia Heterophylla Rhizosphere	RRATLEAEDVCVVDSFQFLGPNNVAARVSFEVRWEATGPAVRRGRGTEVPPTDPAAFLGRIAPARSVGRFSGSGVGFSFTGRGDTERGYALLGRERNGAFLG*
Ga0081538_1000648519	3300005981	Tabebuia Heterophylla Rhizosphere	VVELPTDAFRVSHDGRRATLEAKDVCLVNSFQFLGPNNVAAKVSLKVGWEATGPAVRRGRGDEVDPTDPAAFLGRIAPARSTGSFSGSHVGFSFKASGDTDRGYALLGRERNGAFLT*
Ga0081538_100116999	3300005981	Tabebuia Heterophylla Rhizosphere	VVELPRDAFRVSHDGRKATFEAKDVCLVNSFQFLGPNNVAARVSFKLRWEATGPAVPRGQGAEVPATDRAAFLGRIAPARSTGWFSGSHVGFSFRSDQVSTERGYALMGRERNGVFLTG*
Ga0081538_100409885	3300005981	Tabebuia Heterophylla Rhizosphere	PSGLFWVVELPTDAFRVSHDGRRATLEAKDVCLVNSFQFLGPNNVAAKVSLKVRWEATGPAVRRGRGDEVPPTDPAAFLGRIAPARSTGSFSGSHVGFSFKARGDTDRGYALLGRERNGAFLT*
Ga0081538_101067632	3300005981	Tabebuia Heterophylla Rhizosphere	VVELPDRAFGVSDDGRRATLEAKDVCLVNSFQFLGPNNVAARVSLKVGWEATGPAVRRGRADEVPPTDPAAFLGRIAPARSTAWFSGSHVGFSFKARGDTDRGHALLGRERNGAFLT*
Ga0081538_101323662	3300005981	Tabebuia Heterophylla Rhizosphere	VVELPRDAFRVSHDGRRATLEAEDVCLVNSFQFLGPNNVAAKVSLKCRWEATGPAVRRGRGDEVEPTDPAAFLGRIAPARSTAWFSGSHVGFSFKARGDTDRGYALLGPERNGDFLG*
Ga0081539_100706662	3300005985	Tabebuia Heterophylla Rhizosphere	VVELPGDAFRVGHDGRRASLEAEDVCVLDSFQFGGPVNVPAKVSFRVRWEATGPRERRGQGSAVPATDPAAFLGRFATARSTGSFSGSEVGFSFTGRGDTDRTFAELGPERNGVFLS*
Ga0075417_100193493	3300006049	Populus Rhizosphere	VELPGDAFKVSHDGRRATLEAKDVCVLDSFQFGAPNPIPARVSFKVRWEATGPRERRGKGSTVPPTDPAAFLGHFATARSTGSFSGSEVGFSFKGRGDTDRGYAQFGPERNGVFLS*
Ga0075427_100869321	3300006194	Populus Rhizosphere	VELPGDAFKVSHDGRRATLEAKDVCVLDSFQFGAPNPIPARVSFKVRWEATGPRERRGKGSTVPPTDPAAFLGHFATARSTGSFSGSEVGFSFKGRGDTDRGYAQFGPERN
Ga0075422_101277573	3300006196	Populus Rhizosphere	DAFKVSHDGRRATLEAKDVCVLDSFQFGAPNPIPARVSFKVRWEATGPRERRGKGSTVPPTDPAAFLGHFATARSTGSFSGSEVGFSFKGRGDTDRGYAQFGPERNGVFLS*
Ga0075421_1007878131	3300006845	Populus Rhizosphere	VVELPGDAFKVSRDGRRATLEAKDVCVLDSFQFGGPINVPARVSFKVRWEATGPRERRGKGSAVPPTDPAAFLGRFATARSTGSFCGTEVGFSFTGRGDTAGRGYAQFGPEHNGVFLS*
Ga0075421_1011608711	3300006845	Populus Rhizosphere	VSFKVRWEATGPRERRGSGTDVPPTDPAAFLGRFATARSTGSFSGSEVGFSFTGRGDTDRGYAQFGPERNGVFLS*
Ga0075431_1007190521	3300006847	Populus Rhizosphere	RATLEAKDVCVLDSFQFGAPNPIPARVSFKVRWEATGPRERRGKGSTVPPTDPAAFLGHFATARSTGSFSGSEVGFSFKGRGDTDRGYAQFGPERNGVFLS*
Ga0075419_1000042924	3300006969	Populus Rhizosphere	VELPGDAFKVSHDGRRATLEAKDVCVLDSFQFGAPNPIPARVSFKVWWEATGPRERRGKGSTVPPTDPAAFLGHFATARSTGSFSGSEVGFSFKGRGDTDRGYAQFGPERNGVFLS*
Ga0105679_108259033	3300007790	Soil	LRGSHDGRRATLEAKDVCLVNSFQFLGPNNVAARVSLEVGWEATGPAVRRGRGDEVPPTDPAAFLGRIAPARSTAWFSGSHVGFSFKARGDTDRGYALLGRERNGAFLT*
Ga0075418_102398533	3300009100	Populus Rhizosphere	SVLDSFQFGGPVSVPATVNLNVTWQATAERVPRGKGTAVPPTDPAAFLGRLAPARSTASFSGSELGFSFRSNPGVSTDRGYAEMGTERNGGFLR*
Ga0114129_104891802	3300009147	Populus Rhizosphere	VVELPGDAFRVSHDGRRATLEATDVCVLDSFQFGGPVNVPARVSFKVRWEATGPRERRGEGSAVPPTDPAAFLGRFATARSTGTFSGSEVGLSFTGRGDTDRGYAQFGPERNGVFLS*
Ga0105092_107564362	3300009157	Freshwater Sediment	VCLVNSFQFLGPNNVAAKVSLKVRWEATGPAVRRGRGGEVPPTDPAAFLGQIAPARSTGSFSGSHVGFSFKARGNTDRGYALLGRERNGAFLT*
Ga0105249_116183892	3300009553	Switchgrass Rhizosphere	VVELPGDAFRVSHDGRRATLEAKDVCVLDSFQFGGPINVPARVSFKVRWEATGPRERRGKGSAVPPTDPAAFLGRFATARSTGSFCGTEVGFSFTGRGDTAGRGYAQFGPEHNGVFLS*
Ga0105061_10028834	3300009807	Groundwater Sand	VPATVSFTVRWEATGPRELRGKGSRVPPTDPAAFLGRFAPARATGAFAGSQLGFSFRSNPGVSSDDAFAELGPERNGVFLS*
Ga0105070_10629031	3300009815	Groundwater Sand	PWEATGRRELRGRGSAVPPTDPAAFLGRFADARATGSFSGSEVGFSFRSNPGADTDGTFAELGPERNGVFLR*
Ga0105070_11246711	3300009815	Groundwater Sand	AFTVSHDGRRASLEAEDVCVLDSFQFLGPNSIAASVSFKVRWQATGPPERRGSGTAVPPTDPAAFLGRFAAARATGSFSGSEVGFSFAGRGDTDDTFAELGPERNGVFLA*
Ga0105062_10302771	3300009817	Groundwater Sand	VVELPGDAFKVSHDGRRATLEAKDVCVLDSFQFGGPLTVPASVSFKVRWEATGPRERRGSGSTVPATDPAAFLGRFATARSTGSFSGSEVGFSFSGRGDTDGTFAELGPERNGVFL
Ga0105066_10167142	3300009822	Groundwater Sand	VHDFNPGILSSGLFWVVQLPRDAFTVSHDGRRASLEAEDVCVLDSFQFLGPNSVAASVSFTVRWQATGPPERRGSGTAVPATDPAAFLGRFAAARATGVFSGSEVGFGFAGRGDTDGTFAELGPERNGVFLA*
Ga0126313_100137393	3300009840	Serpentine Soil	VCVIDSFQIFAPGGVPATVSFTVTWQATGPRELRGKGSTVPPTDPAAFLGRFATARATASISGAEIGFSFRSDPGVSSDRGFAELGPERNGVFLS*
Ga0126313_101974272	3300009840	Serpentine Soil	VELPDDAFKLSHDGRRATLEAKDVCVLDSFQFGGPVMVPASVSFKIRWDATGPRERRGNGSAVPPTDPAAFLGRFADARSTGTFSGSEVGFSFNGRADTTGGFAQLGPERNGVFLP*
Ga0126313_104710022	3300009840	Serpentine Soil	VELPGDAFKVSHDGRRATLEAKDVCVLDSFQFGGPINVPARVSFKVRWEATGPRERRGQGSAVPPTDPAAFLGRFATARSTGTFSGSEVGFSFTGRGDTDRGHAQFGPERNGVFLS*
Ga0126312_100731704	3300010041	Serpentine Soil	VFWAVELPDDAFKLSHDGRRATLEAKDVCVLDSFQFGGPVMVPASVSFKIRWDATGPRERRGNGSAVPPTDPAAFLGRFADARSTGTFSGSEVGFSFNGRADTTGGFAQLGPERNGVFLPY*
Ga0126312_109856041	3300010041	Serpentine Soil	VIDSFQIFAPGGVPASVSFTVTWEATGPRELRGKGATVPPTDPAAFLGRFAPARATASISGVEIGFSFRSNPGVSSDRGFAELGPERNGVFLS*
Ga0126311_117550501	3300010045	Serpentine Soil	VSHDGRRATLEASGVCVIDSFQIFAPGGVPATVSFTVTWQATGPRELRGKGSTVPPTDPAAFLGRFATARATASISGAEIGFSFRSDPGVSSDRGFAELGPERNGVFLS*
Ga0126321_13170231	3300010145	Soil	VVELPDDAFKVSHDGRRATLKATDVCVLDSFQFLGPNVIPASVSFKVRWEATGPRVPRGRGLEVPPTDKRAFLGRFARARSTGTFSGSELGFSFRGRGDTDRGFAELGPERNGSFLS*
Ga0126321_13589731	3300010145	Soil	VPATVSFTVRWEATGPREPRGKGSTVPPTDPAAFLGRFATARATASISGAEIGFSFRSDPGVSSDRGFAELGPERNGGFLS*
Ga0126321_13789032	3300010145	Soil	VCVIDSFQIFAPGGVPATVSFTVRWEATGPREPRGKGSTVPSTDPAAFLGRFATARATASISGAEIGFSFRSDPGVSSDRGFAELGPERNGGFLS*
Ga0126306_100496693	3300010166	Serpentine Soil	VVELPTDAFRVSHDGTRATLEAKDVCLVNSFQFLGPNNVAAKVSLKVGWEAIGPAVRRGRADEVEPTDPAAFLGRIAPARSTGSFSGSHVGFSFKAGGNTDRGYALLGRERNGAFLT*
Ga0138505_1000183012	3300010999	Soil	VVELPDDAFKVSHDGRRATLEARDVCVLDSFQFGGPVTVPASVSFKIRWEATGPRERRGRGAEVPATDPAAFLGRFADTRSTGTFSGSEVGFSFQGRANTEGGFAQLGPERNGTFLT*
Ga0120192_100798071	3300012021	Terrestrial	LEAEDVCVLDSFQFLGPNSVAASVSFKVHWQATGPRVRRGSGTAVPPTDPAAFLGRFAPARATGVFSGSEVGFGFAGRGDTDGTFAELGPERNGVFLA*
Ga0150985_1033454532	3300012212	Avena Fatua Rhizosphere	VDLFEPGSGSQVHDFNGGIQPSGLFWLVELQDPDAFRISRDGRHATLAARDLSVVDSFQFGGTTVVPATVSITARWEAIGSPQPRGSGLDVPATDPAAFRGRFAPARSTGSFSGSELGFSFRSREANTDRGFAELGPERNGVFLRPG*
Ga0150985_1109717211	3300012212	Avena Fatua Rhizosphere	AFRVSRDGRRARLHVEHQSLLDSFQFGGPNTVPATASYTVEWEVTGERQQRGKGATVPPTDPAAFLGDFADARSTASFRASQLGFSFQSDPGVSTDRGFAEMGTERNGAFLR*
Ga0150985_1136877631	3300012212	Avena Fatua Rhizosphere	EDALRVSRDGRQATLRADDLAVLDSFQFGGPVTVPATVSFTVRWSATGNFENRGKGRTVPPTDPAAFLGRIAAARSTASFAGRQLGFSFRSDPGVSTDRTYAEMGTERNGVFLT*
Ga0150985_1149281731	3300012212	Avena Fatua Rhizosphere	EGLSVLDSFQFGGPASVPATISLRATWDATGDPVLRGRGSAVAPTDSAAFLARFAPARSTAWFSGSELGFSFRSNPGVSTDRGYAQMGHERNGAFL*
Ga0150985_1188507141	3300012212	Avena Fatua Rhizosphere	DSFQFGGPVSVPATISLNVTWEATGQRVSRGKGSAVAPTDPAAFLGRFAAARSTASFTGSELGFSFRSDPGVSTDRGYAEMGTERNGSFLP*
Ga0150985_1220762411	3300012212	Avena Fatua Rhizosphere	EGLSVLDSFQFGGPLSVPATISLNVTWDATGDRVSRGKGSTVPPSDPAAFLGRFAAARSTASFTGSELGFSFRSNPGVSTDRGYAELGTERNGSFL*
Ga0137369_101025363	3300012355	Vadose Zone Soil	VPATVSSTGRRQATGPWERRGIGSAVSPTDPAAFLGRFAPARATGSFPGRSWGSASGPTRVSSDDAFAELGPERNGVFLP*
Ga0137375_111838702	3300012360	Vadose Zone Soil	SGLFWVVELPGDAFQVNHGGQRATLEASDVCVIDSFQFLGPNSVPATVSFTGRWQATGTWERRGSGSAVSPTDPAAFLGRFAPARATGSFPGRSWGSASGPTRVSSDDAFAELGPERNGVFLP*
Ga0150984_1020600991	3300012469	Avena Fatua Rhizosphere	DVCVLDSFQFGGPVSVPATISLNVTWEATGQRVSRGKGSAVAPTDPAAFLGRFAAARSTASFTGSELGFSFRSDPGVSTDRGYAEMGTERNGSFLP*
Ga0150984_1073008712	3300012469	Avena Fatua Rhizosphere	VHDFNGGVQPSGLFWIVEVPDHAFRVSRDGGHAVLEAKDVWVVDSFQFGGPVQVPASVSFTVRWDAIGPRQRRGSGSGVPPTDPAAFLGSFAFARSTAQFSGHELGFSFRSDRASTDGGFA*
Ga0150984_1092150522	3300012469	Avena Fatua Rhizosphere	LSVLDSFQFGGPASVPATISLRATWDATGDPVLRGRGSAVAPTDSAAFLARFAPARSTAWFSGSELGFSFRSNPGVSTDRGYAQMGHERNGAFL*
Ga0150984_1196404091	3300012469	Avena Fatua Rhizosphere	PSGLFWIVELPDSAFRVSRDGREAILNAKDVSVLDSFQFGGPINVPATVSFAVRWTATGVPQRRGSGATVPATDPAAFLGSFATARSTGSFSGSQLGFSFRSTSATTDRGYAQLGRERNGSFL*
Ga0182000_101962581	3300014487	Soil	VVELPDDAFRVSHDGRQATLEAKDVCVLDSFQIFGPTNVPASVSFKIRWEATGPRERRGKGSTVPPTDPAAFLGRFATARSTGSFSGSELGFSFTGRGDTDDTFAELGPERNGVFLS*
Ga0132258_103656924	3300015371	Arabidopsis Rhizosphere	VELPDDAFRVSHDGRRATLEATDVCVLDSFQFGGPVNVPAKVSFTVRWEATGPRERRGNGAAVPATDPAAFLGRFATARSTGSFSGSEVGFSFKGRGDTDGTFAELGSERNGVFLT*
Ga0132257_1026465982	3300015373	Arabidopsis Rhizosphere	PVGPVGPDDFSVSGDGREATLVARDLPVIDSFQFGGPDMVPASVSFTITWEAVGKRRLRGKGSTVPPTDPAAFLGHFARARSRARFSGSALGFSFRSGEATTDDGYAEMGTERNGLFLAR
Ga0184624_105447811	3300018073	Groundwater Sediment	VVELPDDAFKVSHDGRRATLEAKDVCVLDSFQFGGPVTVPASVSFKVRWEATGRRELRGKGATVPPTDPAAFLGRFANARSTGSFSGSEVGFSFRSNPGASTDLGFAELGPERNGSFLT
Ga0184625_103934511	3300018081	Groundwater Sediment	AKDVCVLDSFQFGGPVTVPASVSFKVRWEATGRRELRGKGATVPPTDPAAFLGRFANARSTGSFSGSEVGFSFRSNSGASTDLGFAELGPERNGSFLT
Ga0184625_104389102	3300018081	Groundwater Sediment	VLDSFQFGGPVNVPASVSFKVRWEATGPRERRGSGTDVPATDPAAFLGRFATARSTGSFSGSEVGFSFTGRGDTDRGYAQFGPERNGVFLS
Ga0184625_105124631	3300018081	Groundwater Sediment	VELPGDAFKVSHDGRRATLEAKDVCVLDSFQFGGPINVPARVSFKVRWEATGPRERRGKGSAVPPTDPAAFLGRFATARSTGSFSGTEVGFSFTGRGDTAGRGYAQFGPERNGVFLS
Ga0190269_104465091	3300018465	Soil	VELPDEAFKVSHDGRRATLEAKDVCVVDSFQFGGPVNVPASVSFKIRWEATSPRERRGKGSTVPATDPAAFLGRFATARSTGSFSGSQVGFSFRGRGDTDDTFAELGPERNGVFLS
Ga0190268_114750981	3300018466	Soil	VELPGDAFKVGHDGRRATLEAKDVCVLDSFQFGGPINVPASVSFKVRWEATGPREHRGKGSAVPPTDPAAFLGRFATARSTGTFSGSEVGFSFTGRGDTDRGYAQFGPERNGIFLS
Ga0190274_100163283	3300018476	Soil	VVELPTDAFRVSHDGTRATLEAKDVCLVNSFQFLGPNNVAAKVSLKVGWEAIGPAVRRGRADEVEPTDPAAFLGRIAPARSTGSFSGSHVGFSFKAGGNTDRGYALLGRERNGAFLT
Ga0190274_100781291	3300018476	Soil	VELPGDAFKVSHDGRRATLEAKDVCVLDSFQFGGPVTVPASVSFKIRWEATGRRERRGSGLDVPPTDPAAFLGRFATARSTGTFSGSEVGFSFQGRAGTEGGYAQLGPERNGAFLT
Ga0190267_115417011	3300019767	Soil	VELPGDAFKVSHDGRRATLDARDVCVLDSFQFGGPINVPARVSFKVQWEATGPRERRGQGSAVPATDPAAFLGRFATARSTGTFSGTEVGFSFTGRGDTDNTFAELGSERNGVFLT
Ga0222625_12290211	3300022195	Groundwater Sediment	VVELPGDAFEVSHDGRRASLEAKDVCVLDSFQFGGPTNVPASVSFKVRWEATGRRERRGSGTDVPPTDPAAFLGRFAFARSTGSFSGTEVGFSFTGRGDTDDTFAE
Ga0207694_117103892	3300025924	Corn Rhizosphere	VHDNNGGVQPSGLFWVVPIPQDAFKVSHDGRRATLEAHDVSVIDSFQFGGPNMVPATVSFTVKWQAIEHRQPRGKGSTVSPTDPAAFLGSFARARSTGSFSGSQLGFSFKSHAA
Ga0207687_102809442	3300025927	Miscanthus Rhizosphere	VHDNNGGVQPSGLFWVVPIPQDAFKVSHDGRRATLEAHDVSVIDSFQFGGPNMVPATVSFTVKWQAIEHRQPRGKGSTVSPTDPAAFLGSFARARSTGSFSGSQLGFSFKSHAASTDLGYGLMGSVFL
Ga0207712_115825562	3300025961	Switchgrass Rhizosphere	VHDNNGGVQPSGLFWVVPIPQDAFKVSHDGRRATLEAHDVSVIDSFQFGGPNMVPATVSFTVKWQAIEHRQPRGKGSTVSPTDPAAFLGSFARARSTGSFSGSQLGFSFKSHAASTDLGYGLMG
Ga0207675_1002941941	3300026118	Switchgrass Rhizosphere	VVELPGDAFRVSHDGRRATLEAKDVCVLDSFQFGGPINVPARVSFKVRWEATGPRERRGKGSAVPPTDPAAFLGRFATARSTGSFCGTEVGFSFTGRGDTAGRGYAQFG
Ga0209879_10148442	3300027056	Groundwater Sand	VHDFNPGILSSGLFWVVQLPRDAFTVSHDGRRASLEAEDVCVLDSFQFLGPNSVAASVSFTVRWQATGPPERRGSGTAVPATDPAAFLGRFAAARATGVFSGSEVGFGFAGRGDTDGTFAELGPERNGVFLP
Ga0209875_10191411	3300027209	Groundwater Sand	VVQLPGGAFRVSHDGRRASLEAKDVCVLDSFQFLGPNSVAASVSFKVRWQATGPRERRGSGTSVPATDPAAFLGRFAPARATGVFSGSEVGFGFAGRGNTDGTFAELGPERNGVFLA
Ga0209842_10690401	3300027379	Groundwater Sand	FTVRWQATGPPERRGSGTAVPATDPAAFLGRFAAARATGVFSGSEVGFGFAGRGDTDGTFAELGPERNGVFLA
Ga0209899_10755941	3300027490	Groundwater Sand	DVCVLDSFQFLGPNSIAASVSFKVRWQATGPPERRGSGTAVPPTDPAAFLGRFAAARATGSFSGSEVGFSFAGRGDTDDTFAELGPERNGVFLA
Ga0209887_10338601	3300027561	Groundwater Sand	VHDFNPGILSSGLFWVVQLPRDAFTVSHDGRRASLEAEDVCVLDSFQFLGPNSVAASVSFTVRWQATGPPERRGSGTAVPATDPAAFLGRFAEARATGSFSGSEVGFSFAGRGDTDDTFAELGPERNGVFLA
Ga0209874_10574892	3300027577	Groundwater Sand	VHDFNPGILSSGLFWVVQLPRDAFTVSHDGRRASLEAEDVCVLDSFQFLGPNSVAASVSFTVRWQATGPPERRGSGTAVPATDPAAFLGRFAAARATGVFSGSEVGFGFAGRGDTDGTFAELGPERNGVFLA
Ga0209461_100186601	3300027750	Agave	VVELPDDAFRVSHDRRQATLEAKDVCVLDSFQFLGPNSVAASVSFTVRWQATGPRERRGSDSSVPPTDPAAFLGRFAPARATGSFSGSEVGFGFTGRGTSAGTFAELGPERNGVFLI
Ga0209814_100117894	3300027873	Populus Rhizosphere	VELPGDAFKVSHDGRRATLEAKDVCVLDSFQFGAPNPIPARVSFKVRWEATGPRERRGKGSTVPPTDPAAFLGHFATARSTGSFSGSEVGFSFKGRGDTDRGYAQFGPERNGVFLS
Ga0209857_10496942	3300027957	Groundwater Sand	VHDFNPGILSSGLFWVVQLPRDAFTVSHDGRRASLEAEDVCVLDSFQFLGPNSVAASVSFTVRWQATGPPERRGSGTAVPATDPAAFLGRFAAARATGVFSGSEVGFG
Ga0307279_100933142	3300028709	Soil	VVPIPQDAFRVSHDGRRATLEARDVSVIDSFQFGGPNMVPATVSFTVRWEAIEHRQPRGKGSTVPPTDPAAFLGSFARARSTGSFSGSELGFSFKSHAANTDLGYALMGRERNGVFL
Ga0307319_101389432	3300028722	Soil	AKDVCVLDSFQFGGPVTVPASVSFKIRWEATGPRERRGRGSEVPATDPAAFLGRFADARSTGSFSGSEVGFSFNGRADTEGGFAQLGPERNGAFLP
Ga0307318_101979422	3300028744	Soil	VCVLDSFQFGGPVTVPASVSFKIRWEATGPRERRGRGSEVPATDPAAFLGRFADARSTGSFSGSEVGFSFNGRADTEGGFAQLGPERNGAFLP
Ga0307297_103397462	3300028754	Soil	PDDFSVSDDGREATLVARDLPVIDSFQFGGPDMVPASVNFTITWEAVGKRRLRGKGRTVQPTDPAAFLGHFARARSRARFSGSALGFSFRSDEATTDGGYAEMGTERNGLFLAR
Ga0307320_101236682	3300028771	Soil	FGGPTTVPASVSFKVRWEATGRRELRGKGSAVPPTDPAAFLGRFANARSTGSFSGSEVGFSFRSNPGASTDLGFAELGPERNGIFLT
Ga0307320_102243952	3300028771	Soil	VPASVSFKIRWEATGPRERRGRGSEVPATDPAAFLGRFADARSTGSFSGSEVGFSFNGRADTEGGFAQLGPERNGAFLP
Ga0307288_101331872	3300028778	Soil	VRDRAVIDSFQFGGANSVPAMVSFRVRWQAIGPPEPRGKGTAVPADDEAAFLGMLARARSTGSFRGSQLGFSFRSDSATTDRGYAEMGRERNGGFLTADCNAGAITHGGAS
Ga0307287_101323002	3300028796	Soil	VLDSFQFGGPTTVPASVSFKVRWEATGRRELRGKGSAVPPTDPAAFLGRFANARSTGSFSGSEVGFSFRSNPGASTDLGFAELGPERNGIFLT
Ga0307284_100043142	3300028799	Soil	VSHDGRRATLEARDVSVIDSFQFGGPNMVPATVSFTVRWEAIEHRQPRGKGSTVPPTDPAAFLGSFARARSTGSFSGSELGFSFKSHAANTDLGYALMGRERNGVFL
Ga0307292_101289621	3300028811	Soil	VELPGDAFKVSHDGRRATLEANDVCVLDSFQFGGPVTVPASVSFKIRWEATGPRERRGRGSEVPATDPAAFLGQFADARSTGTFSGSEVGFSFKGRADTEGGFAQLGPERNGTFLT
Ga0307302_101521052	3300028814	Soil	VLDSFQFGGPTTVPASVSFKVRWEATGRRELRGKGSAVPPTDPAAFLGRFANARSTGSFSGSEVGFSFRSNPGASTDLGFAELGPERNGSFLT
Ga0307302_101598961	3300028814	Soil	VVELPGDAFEVSHDGRRASLEAKDVCVLDSFQFGGPTNVPASVSFKVRWEATGRRERRGSGTDVPPTDPAAFLGRFAVARSTGSFSGSEVGFSFIGRGDTDDTFAELGPERNGVFLP
Ga0307310_100393181	3300028824	Soil	FWVVPIPQDAFRVSHDGRRATLEARDVSVIDSFQFGGPNMVPATVSFTVKWEAIEHRQPRGKGSTVPPTDPAAFLGSFARARSTGSFSGSELGFSFKSHAANTDLGYALMGRERNGVFL
Ga0307314_101539221	3300028872	Soil	PDDFSVSDDGREATLVARDLPVIDSFQFGGPDMVPASVNFTITWEAVGKRRLRGKGRTVQPTDPAAFIGHFARARSRARFSGSALGFSFRSDEATTDGGYAEMGTERNGLFLAR
Ga0307286_101866701	3300028876	Soil	VTVPASVSFKIRWEATGPRERRGRGSEVPATDPAAFLGQFADTRSTGTFSGSEVGFSFQGRANTEGGFAQLGPERNGTFLT
Ga0307278_100405574	3300028878	Soil	VLDSFQFLGPNSVAATVSFKAHWEATGRRERRGSGTAVPPTDPAAFLGRFAPARATGSFSGSEVGFSFRSNPGADTDDTFAELGPERNGNFL
Ga0307277_101894471	3300028881	Soil	VELPDDAFRVSHDGRRATLEAKDVCVLDSFQFGGPVNVPAKVSFKVRWEATGPRERRGKGSDVPPTDPAAFLGRFATARSTGSFSGSELGFSFTGRGDTDGTFAELGSERNGVFL
Ga0307304_102135772	3300028885	Soil	VHDNNGGVQPSGLFWVVPIPQDAFRVSHDGRRATLEARDVSVIDSFQFGGPNMVPATVSFTVRWEAIEHRQPRGKGSTVPPTDPAAFLGSFARARSTGSFSGSELGFSFKSHAANTDLGYAL
Ga0268243_10740921	3300030510	Soil	VVELPDDAFRVSHDRRQATLEAKDVCVLDSFQIFGPTNVPASVSFKIRWEATGPRERRGKGSTVPPTDPAAFLGRFATARSTGSFSGSQVGFSFTGRGDTDDTF
Ga0308178_10280462	3300030990	Soil	VVPIPQDAFKVSHDGRRATLQARDLSVIDSFQFGGPNMVPATVSFTVRWEAIEHRQPRGKGSTVPPTDPAAFLGSFARARSTGSFSGSELGFSFKSHAANTDLGYALMGRERNGVFL
Ga0308190_10617312	3300030993	Soil	VVPIPQDAFRVSHDGRRATLEARDVSVIDSFQFGGPNMVPATVSFTVKWEAIEHRQPRGKGSTVPPTDPAAFLGSFARARSTGSFSGSELGFSFKSHAANTDLGYALMGRERNGVFL
Ga0308192_10402682	3300031082	Soil	VHDNNGGVQPSGLFWVVPIPQDAFRVSHDGRRATLEARDVSVIDSFQFGGPNMVPATVSFTVRWEAIEHRQPRGKGSTVPPTDPAAFLGSFARARSTGSFSGSELGFSFKSHAANTDLGYALMG
Ga0308204_101786852	3300031092	Soil	DDGREATLVARDLPVIDSFQFGGPDMVPASVNFTITWEAVGKRRLRGKGRTVQPTDPAAFLGHFARARSRARFSGSALGFSFRSDEATTDGGYAEMGTERNGLFLAR
Ga0308199_11035301	3300031094	Soil	VQLPDHGIRVSHDGRRVSMEGRDVSVIDSFQFGGPVQVPATVSFSVSWQATSAPELRGKGSTVPATDPAAFLGRFATARSTARFSGSELGFSFRSLTANTSEGYAEIGPERNGSFL
Ga0308181_10865271	3300031099	Soil	VVPIPQDAFRVSHDGRRATLEARDVSVIDSFQFGGPNMVPATVSFTVNWEAIEHRQPRGKGSTVPPTDPAAFLGSFARARSTGSFSGSELGFSFKSHAANTDLGYALMGRERNGVFL
Ga0308187_100714332	3300031114	Soil	VVELPDDAFKVSHDGRRATLEAKDVCVLDSFQFGGPVTVPASVSFKVQWEATGPRERRGSGSDVPASDPAAFLGRFADARSTGSFSGSEVGFSFKGRADTDRGFAQLGPERNGTFLT
Ga0308194_100794262	3300031421	Soil	VIDSFQFGGPFPVPATVSLNVTWEATGDRLPRGRGSAVAPTDPAAFLGRFAAARSTASFSGSELGFSFRSNPGVSTDRGYAEMGTERNGSSLA
Ga0307408_1004903012	3300031548	Rhizosphere	VCVLDSFQFGGPTNVPASVSFKVRWEATGRPERRGRGGEVPPTDPAAFLGRFAAARSTGSFSGFEVGFSFKGRGDTDRGYAQLGPERNGTFLS
Ga0307408_1023580252	3300031548	Rhizosphere	NGGILPSGLFWVVELPGDAFKVSDDGRRATLEARDVCVLDSFQFGGPLTVPASVSFKIRWEATGSRELRGSGLAVPATDPAAFLGRFATARSTGTFSGSEVGFSFQGRAGTEGGFAQLSPERNGAFFT
Ga0307405_102013292	3300031731	Rhizosphere	VCVIDSFQIFAPGGVPATVSFTVTWQATGPRELRGKGSTVPPTDPAAFLGRFATARATASISGAEIGFSFRSDPGVSSDRGFAELGPERNGVFLS
Ga0307413_103015212	3300031824	Rhizosphere	VCVIDSFQIFAPGGVPASVSFTVTWEATGPRERRGEGATVPATDPAAFLGRFATARATASISGVEIGFSFRSNPGVSSDRGFAELGPERNGVFLS
Ga0307410_103017201	3300031852	Rhizosphere	PFEPGSGAQVHDFNGGILPSGLIWAVELPDDAFKLSHDGRRATLEAKDVCVLDSFQFGGPVMVPASVSFKIRWDATGPRERRGNGSAVPPTDPAAFLGRFADARSTGTFSGSEVGFSFNGRADTTGGFAQLGPERNGVFLP
Ga0307407_109932252	3300031903	Rhizosphere	VELPDDAFKLSHDGRRATLEAKDVCVLDSFQFGGPVMVPASVSFKIRWDATGPRERRGNGSAVPPTDPAAFLGRFADARSTGTFSGSEVGFSFNGRADTTGGFAQLGPERNGVFLP
Ga0307409_1013907352	3300031995	Rhizosphere	VCVIDSFQIFAPGGVPASVSFTVRWEATGPRERRGKGATVPPTDPAAFLGRFATARATASISGVEIGFSFRSNPGVSSDRGFAELGPERNGVFLS
Ga0307416_1004159132	3300032002	Rhizosphere	MHDFNGGVQPSGLFWIVELPDHALRVSRDGDHAILEARDVSVVDSFQFGGPVQVPASVSFTVRWDATGPRQRRGSGSGVPATDPAAFLGNFAFARSTAQFSGRELGFSFQSNRATTDRGFAEMGFERNGTFLD
Ga0307416_1010255981	3300032002	Rhizosphere	SFQIFAPGGVPASVSFTVTWEATGPRERRGEGATVPATDPAAFLGRFATARATASISGVEIGFSFRSNPGVSSDRGFAELGPERNGVFLS
Ga0307415_1000780452	3300032126	Rhizosphere	VGGYRPRELRGRGSAVPVTDPAAFLGRFPEARATGSFSGSEVGFSFRSNPGAGTDGTFAELGPERNGVFLP
Ga0307415_1002582323	3300032126	Rhizosphere	VCVLDSFQFGGPTNVPASVSFKVRWEATGRPERRGRGGEVPPTDPAAFLGRFAGARSTGSFSGFEVGFSFKGSGDTDRGYAQLGPERNGTFLP
Ga0334932_088224_252_539	3300034174	Sub-Biocrust Soil	VELPDNAFTVNHDGRRATLDAKDVCVLDSFTFGGPTNVPASVSFKVRWEATGRFERRGRGLDVPPTDPAALLGRFARARSTGWFSGFQVGFSFKGK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F061966

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences