Metagenome / Metatranscriptome Family F061964

Basic Information
Family ID	F061964
Family Type	Metagenome / Metatranscriptome
Number of Sequences	131
Average Sequence Length	78 residues
Representative Sequence	MLKDTHETLKPGTHVEVLSKKQVDGKSLCGTIIGAAANVLGTYIVEYHPGLDNGHHSENELKVIPESLCQHSTPRPF
Number of Associated Samples	103
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	77.10 %
% of genes near scaffold ends (potentially truncated)	27.48 %
% of genes from short scaffolds (< 2000 bps)	83.97 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.60

Most Common Taxonomy
Group	Unclassified (57.252 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (11.450 % of family members)
Environment Ontology (ENVO)	Unclassified (39.695 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (61.832 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 5.71% β-sheet: 26.67% Coil/Unstructured: 67.62%
Feature Viewer

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Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF01594	AI-2E_transport	4.58
PF01425	Amidase	3.05
PF13620	CarboxypepD_reg	2.29
PF09335	SNARE_assoc	2.29
PF03929	PepSY_TM	2.29
PF02627	CMD	1.53
PF11994	DUF3489	1.53
PF06271	RDD	0.76
PF07394	DUF1501	0.76
PF00144	Beta-lactamase	0.76
PF06348	DUF1059	0.76
PF07969	Amidohydro_3	0.76
PF13185	GAF_2	0.76
PF13673	Acetyltransf_10	0.76
PF08240	ADH_N	0.76
PF07730	HisKA_3	0.76
PF05257	CHAP	0.76
PF01266	DAO	0.76
PF12833	HTH_18	0.76
PF00356	LacI	0.76
PF11249	DUF3047	0.76
PF01795	Methyltransf_5	0.76
PF00271	Helicase_C	0.76
PF13360	PQQ_2	0.76
PF02566	OsmC	0.76
PF02900	LigB	0.76
PF00903	Glyoxalase	0.76
PF00155	Aminotran_1_2	0.76
PF08281	Sigma70_r4_2	0.76
PF03449	GreA_GreB_N	0.76
PF13847	Methyltransf_31	0.76
PF06149	DUF969	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	4.58
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	3.05
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	2.29
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	2.29
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	2.29
COG3295	Uncharacterized conserved protein	Function unknown [S]	2.29
COG3182	PepSY-associated TM region	Function unknown [S]	2.29
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	1.53
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	1.53
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	0.76
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.76
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.76
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.76
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.76
COG3819	Uncharacterized membrane protein	Function unknown [S]	0.76
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.76
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	0.76
COG1714	Uncharacterized membrane protein YckC, RDD family	Function unknown [S]	0.76
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.76
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.76
COG0782	Transcription elongation factor, GreA/GreB family	Transcription [K]	0.76
COG0275	16S rRNA C1402 N4-methylase RsmH	Translation, ribosomal structure and biogenesis [J]	0.76

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.25 %
All Organisms	root	All Organisms	42.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.25 %
cellular organisms	root	All Organisms → cellular organisms	42.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.25 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	42.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.25 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	17.56 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.58 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.25 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	9.16 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.53 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.76 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.76 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.76 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.25 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.40 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.53 %
Acidobacteria bacterium 13_1_40CM_56_16	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_56_16	0.76 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.76 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.76 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.76 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.25 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.40 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	1.53 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.76 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.76 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.76 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.76 %
Acidobacteria bacterium 13_1_40CM_56_16	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_56_16	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.25 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.40 %
unclassified Rhodospirillaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae	1.53 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.76 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	0.76 %
Cupriavidus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus	0.76 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.76 %
Acidobacteria bacterium 13_1_40CM_56_16	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_56_16	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.25 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.40 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1.53 %
Cupriavidus pauculus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → Cupriavidus pauculus	0.76 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.76 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	0.76 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.76 %
Acidobacteria bacterium 13_1_40CM_56_16	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_56_16	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2070309004\|prs_FHA1B5K04XP9ZE	Not Available	513	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101501975	Not Available	745	Open in IMG/M
3300000891\|JGI10214J12806_10950309	Not Available	1356	Open in IMG/M
3300002076\|JGI24749J21850_1043209	Not Available	662	Open in IMG/M
3300004114\|Ga0062593_100953075	Not Available	874	Open in IMG/M
3300004157\|Ga0062590_102050193	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300004463\|Ga0063356_100094222	All Organisms → cellular organisms → Bacteria → Acidobacteria	3222	Open in IMG/M
3300004463\|Ga0063356_100695434	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1397	Open in IMG/M
3300004463\|Ga0063356_101404646	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1028	Open in IMG/M
3300004480\|Ga0062592_100296413	Not Available	1221	Open in IMG/M
3300004480\|Ga0062592_101344924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	677	Open in IMG/M
3300005290\|Ga0065712_10274992	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300005294\|Ga0065705_11150504	Not Available	512	Open in IMG/M
3300005328\|Ga0070676_11500287	Not Available	519	Open in IMG/M
3300005331\|Ga0070670_100025861	All Organisms → cellular organisms → Bacteria → Proteobacteria	5050	Open in IMG/M
3300005331\|Ga0070670_100421418	All Organisms → cellular organisms → Bacteria	1180	Open in IMG/M
3300005335\|Ga0070666_11113963	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587	Open in IMG/M
3300005338\|Ga0068868_100250307	All Organisms → cellular organisms → Bacteria	1491	Open in IMG/M
3300005353\|Ga0070669_100889994	Not Available	760	Open in IMG/M
3300005354\|Ga0070675_100072761	All Organisms → cellular organisms → Bacteria	2853	Open in IMG/M
3300005354\|Ga0070675_100155642	All Organisms → cellular organisms → Bacteria → Acidobacteria	1962	Open in IMG/M
3300005355\|Ga0070671_100149121	Not Available	1974	Open in IMG/M
3300005356\|Ga0070674_100416259	Not Available	1101	Open in IMG/M
3300005365\|Ga0070688_100048711	All Organisms → cellular organisms → Bacteria	2634	Open in IMG/M
3300005549\|Ga0070704_100124919	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	1983	Open in IMG/M
3300005549\|Ga0070704_102074309	Not Available	528	Open in IMG/M
3300005577\|Ga0068857_100417174	Not Available	1251	Open in IMG/M
3300005577\|Ga0068857_101876513	Not Available	587	Open in IMG/M
3300005617\|Ga0068859_101541110	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	734	Open in IMG/M
3300005840\|Ga0068870_11324249	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300005841\|Ga0068863_101306952	Not Available	732	Open in IMG/M
3300005844\|Ga0068862_101946628	Not Available	598	Open in IMG/M
3300006046\|Ga0066652_100546206	All Organisms → cellular organisms → Bacteria	1084	Open in IMG/M
3300006196\|Ga0075422_10029742	All Organisms → cellular organisms → Bacteria	1897	Open in IMG/M
3300006845\|Ga0075421_101009617	Not Available	941	Open in IMG/M
3300006852\|Ga0075433_11134694	Not Available	679	Open in IMG/M
3300006876\|Ga0079217_11559816	Not Available	525	Open in IMG/M
3300006894\|Ga0079215_10388854	Not Available	818	Open in IMG/M
3300007004\|Ga0079218_10017074	All Organisms → cellular organisms → Bacteria → Acidobacteria	3826	Open in IMG/M
3300007004\|Ga0079218_10191861	All Organisms → cellular organisms → Bacteria	1548	Open in IMG/M
3300007004\|Ga0079218_11917242	Not Available	671	Open in IMG/M
3300009094\|Ga0111539_10107522	All Organisms → cellular organisms → Bacteria	3273	Open in IMG/M
3300009094\|Ga0111539_10650995	Not Available	1227	Open in IMG/M
3300009147\|Ga0114129_10623709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → Cupriavidus pauculus	1394	Open in IMG/M
3300009148\|Ga0105243_12191013	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300009156\|Ga0111538_10448337	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1636	Open in IMG/M
3300009156\|Ga0111538_11571399	Not Available	829	Open in IMG/M
3300009176\|Ga0105242_10018705	All Organisms → cellular organisms → Bacteria	5420	Open in IMG/M
3300009177\|Ga0105248_10392167	Not Available	1563	Open in IMG/M
3300009553\|Ga0105249_10063296	Not Available	3398	Open in IMG/M
3300009553\|Ga0105249_12173878	Not Available	628	Open in IMG/M
3300010397\|Ga0134124_11932348	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300010400\|Ga0134122_12091245	Not Available	607	Open in IMG/M
3300010401\|Ga0134121_10456600	Not Available	1167	Open in IMG/M
3300010403\|Ga0134123_11327097	Not Available	756	Open in IMG/M
3300011119\|Ga0105246_12086858	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300011445\|Ga0137427_10429179	Not Available	548	Open in IMG/M
3300012160\|Ga0137349_1069380	Not Available	642	Open in IMG/M
3300012469\|Ga0150984_110339275	Not Available	631	Open in IMG/M
3300013308\|Ga0157375_12276323	Not Available	646	Open in IMG/M
3300014325\|Ga0163163_11173882	All Organisms → cellular organisms → Bacteria	830	Open in IMG/M
3300014326\|Ga0157380_11826808	Not Available	667	Open in IMG/M
3300014745\|Ga0157377_10299023	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1061	Open in IMG/M
3300014745\|Ga0157377_10770541	Not Available	706	Open in IMG/M
3300014969\|Ga0157376_12292845	Not Available	579	Open in IMG/M
3300014969\|Ga0157376_12490412	Not Available	557	Open in IMG/M
3300015077\|Ga0173483_10238222	Not Available	859	Open in IMG/M
3300015200\|Ga0173480_10690490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	638	Open in IMG/M
3300015201\|Ga0173478_10041185	Not Available	1461	Open in IMG/M
3300015371\|Ga0132258_10288552	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_56_16	4030	Open in IMG/M
3300015371\|Ga0132258_10960771	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2158	Open in IMG/M
3300015371\|Ga0132258_11131073	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1979	Open in IMG/M
3300015372\|Ga0132256_103795067	Not Available	508	Open in IMG/M
3300015374\|Ga0132255_101294544	Not Available	1099	Open in IMG/M
3300015374\|Ga0132255_104633229	Not Available	582	Open in IMG/M
3300015374\|Ga0132255_104768048	Not Available	574	Open in IMG/M
3300015374\|Ga0132255_104841288	Not Available	570	Open in IMG/M
3300017792\|Ga0163161_10097215	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2187	Open in IMG/M
3300018083\|Ga0184628_10535787	Not Available	601	Open in IMG/M
3300018469\|Ga0190270_11449370	Not Available	734	Open in IMG/M
3300018476\|Ga0190274_10017207	All Organisms → cellular organisms → Bacteria	4655	Open in IMG/M
3300018481\|Ga0190271_12265930	Not Available	649	Open in IMG/M
3300019254\|Ga0184641_1160477	Not Available	668	Open in IMG/M
3300019255\|Ga0184643_1488410	Not Available	597	Open in IMG/M
3300019279\|Ga0184642_1471439	Not Available	781	Open in IMG/M
3300019356\|Ga0173481_10630571	Not Available	568	Open in IMG/M
3300019362\|Ga0173479_10057062	Not Available	1305	Open in IMG/M
3300022893\|Ga0247787_1044462	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300023062\|Ga0247791_1030575	Not Available	823	Open in IMG/M
3300025903\|Ga0207680_10274909	Not Available	1169	Open in IMG/M
3300025907\|Ga0207645_10880491	Not Available	608	Open in IMG/M
3300025918\|Ga0207662_10350338	All Organisms → cellular organisms → Bacteria	992	Open in IMG/M
3300025923\|Ga0207681_10131555	Not Available	1851	Open in IMG/M
3300025925\|Ga0207650_10119385	All Organisms → cellular organisms → Bacteria → Proteobacteria	2051	Open in IMG/M
3300025925\|Ga0207650_10924403	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300025926\|Ga0207659_10045682	All Organisms → cellular organisms → Bacteria	3090	Open in IMG/M
3300025926\|Ga0207659_10097458	All Organisms → cellular organisms → Bacteria → Acidobacteria	2209	Open in IMG/M
3300025926\|Ga0207659_10779328	Not Available	821	Open in IMG/M
3300025930\|Ga0207701_10006123	All Organisms → cellular organisms → Bacteria	12036	Open in IMG/M
3300025930\|Ga0207701_10735581	Not Available	834	Open in IMG/M
3300025934\|Ga0207686_10096349	All Organisms → cellular organisms → Bacteria	1966	Open in IMG/M
3300025937\|Ga0207669_10458193	Not Available	1012	Open in IMG/M
3300025938\|Ga0207704_11436656	Not Available	591	Open in IMG/M
3300025940\|Ga0207691_10036139	All Organisms → cellular organisms → Bacteria → Acidobacteria	4578	Open in IMG/M
3300025941\|Ga0207711_11487180	Not Available	620	Open in IMG/M
3300025961\|Ga0207712_11999404	Not Available	519	Open in IMG/M
3300026088\|Ga0207641_11296980	Not Available	729	Open in IMG/M
3300026095\|Ga0207676_10636736	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1028	Open in IMG/M
3300026116\|Ga0207674_10985129	Not Available	812	Open in IMG/M
3300027886\|Ga0209486_10037185	All Organisms → cellular organisms → Bacteria → Acidobacteria	2379	Open in IMG/M
3300027886\|Ga0209486_10096941	All Organisms → cellular organisms → Bacteria	1559	Open in IMG/M
3300027907\|Ga0207428_10016787	All Organisms → cellular organisms → Bacteria → Acidobacteria	6294	Open in IMG/M
3300027907\|Ga0207428_10195256	All Organisms → cellular organisms → Bacteria	1524	Open in IMG/M
3300031058\|Ga0308189_10087322	All Organisms → cellular organisms → Bacteria → Acidobacteria	960	Open in IMG/M
3300031058\|Ga0308189_10420296	Not Available	557	Open in IMG/M
3300031093\|Ga0308197_10465489	Not Available	510	Open in IMG/M
3300031114\|Ga0308187_10492621	Not Available	503	Open in IMG/M
3300031547\|Ga0310887_10259194	Not Available	974	Open in IMG/M
3300031562\|Ga0310886_10968439	Not Available	544	Open in IMG/M
3300031940\|Ga0310901_10495320	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300031944\|Ga0310884_10017363	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2834	Open in IMG/M
3300032000\|Ga0310903_10649393	Not Available	566	Open in IMG/M
3300032012\|Ga0310902_10261129	Not Available	1048	Open in IMG/M
3300032013\|Ga0310906_10749571	Not Available	686	Open in IMG/M
3300032017\|Ga0310899_10156691	Not Available	977	Open in IMG/M
3300032017\|Ga0310899_10738920	Not Available	502	Open in IMG/M
3300032122\|Ga0310895_10669344	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300032157\|Ga0315912_10024734	All Organisms → cellular organisms → Bacteria → Acidobacteria	4885	Open in IMG/M
3300032157\|Ga0315912_10330531	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1203	Open in IMG/M
3300032211\|Ga0310896_10921960	Not Available	507	Open in IMG/M
3300032421\|Ga0310812_10057931	All Organisms → cellular organisms → Bacteria → Acidobacteria	1510	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	54.20%
Environmental	Environmental	45.80%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	54.20%
Terrestrial	Environmental → Terrestrial	41.22%
Aquatic	Environmental → Aquatic	4.58%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	41.22%
Rhizosphere	Host-Associated → Plants → Rhizosphere	35.11%
Rhizoplane	Host-Associated → Plants → Rhizoplane	18.32%
Freshwater	Environmental → Aquatic → Freshwater	2.29%
Sediment	Environmental → Aquatic → Sediment	2.29%
Roots	Host-Associated → Plants → Roots	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	38.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	19.08%
Soil	Host-Associated → Plants → Rhizosphere → Soil	16.03%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	12.21%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	6.11%
Loam	Environmental → Terrestrial → Soil → Loam	3.05%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.29%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.29%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	19.08%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	16.03%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.27%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	12.21%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	9.92%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	8.40%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	6.11%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.05%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.29%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.29%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.76%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	8.40%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	7.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	6.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	5.34%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	5.34%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.82%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.05%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.05%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.29%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.29%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.29%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.29%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.53%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	1.53%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.53%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.53%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.76%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.76%
Green-Waste Compost	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Green-Waste Compost	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.76%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.76%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2070309004	Green-waste compost microbial communities at University of California, Davis, USA, from solid state bioreactor - Luquillo Rain Forest, Puerto Rico	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300002076	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011445	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2	Environmental	Open in IMG/M
3300012160	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT630_2	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019254	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019255	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300022893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S126-311R-4	Environmental	Open in IMG/M
3300023062	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S081-202R-4	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
prs_04140810	2070309004	Green-Waste Compost	MLDNKDTHDTLKPGTHVEVLTRKKVDGTGLCGTIIGAAPNVLGTYIVQYHPGRDNGYHAENELQVIPESQCKYSTPRPF
INPhiseqgaiiFebDRAFT_1015019752	3300000364	Soil	VKTAAGARPAYIEIGGGSFGGENKTMLDIKDSHETLKPGTHVEVLSKKQVDGKSLCGTIIGADPNERDTYVVEYHPGLDNGHHSQNELKVIPESLCQHSTPRPF*
JGI10214J12806_109503092	3300000891	Soil	MLQDTHETLKPGTHVEVLSKKQVDGKTLCGTIIGAAANALGTYIVEYHPGLDNGQHSENELKIIPESLCQHSTPRPF*
JGI24749J21850_10432092	3300002076	Corn, Switchgrass And Miscanthus Rhizosphere	PQSSHEYGEHEMVDKKYTHETLKPGTYVEVLSKKQVDGKNLCGTIITAAPDDPGTYVVEYHPGLGNGHHSENELQVIPRFLCQHSTPRPF*
Ga0062593_1009530751	3300004114	Soil	MIKDPHETLKPGTHVEVLTKKQVDGNSLCGTIIGVAANAPGTYVVEYHPGLDNGQHPENELKVIPESLCKHSTPRPF*
Ga0062590_1020501931	3300004157	Soil	NMLKDTHETLKPGTHVEVLSKKQVDGKSLCGTIIGVAANVLGTYIVEYHPGLDNGHHPENELKVIPESLCQHSTPRPF*
Ga0063356_1000942223	3300004463	Arabidopsis Thaliana Rhizosphere	MLEDTHETLKPGTHVEILSKKQVDGKSLCGTIIGVAANAVGTYVVEYHPGVDNGQHPENELKVIPESQCQHSTPRPF*
Ga0063356_1006954344	3300004463	Arabidopsis Thaliana Rhizosphere	MLNDTHETLKPGTHVEVLSKKQVDGKSLCGTIIGVAANALGTYVVEYHPGLDNGQHPENELKVIPESLCEHSTPRPF*
Ga0063356_1014046463	3300004463	Arabidopsis Thaliana Rhizosphere	MVIDTNETLKPGTHVEVLSKKQVDGKCLCGTIIGVAANALGTYVVEYHPGVDNGQHSENELKVI
Ga0062592_1002964131	3300004480	Soil	MVDKKYTHETLKPGTYVEVLSKKQVDGKNLCGTIITAAPDDPGTYVVEYHPGLGNGHHSENELQVIPRFLCQHSTPRPF*
Ga0062592_1013449242	3300004480	Soil	MLKDTHETFKPGTHVEVLSKKQVDGKMLCGTIIGAAANVLGTYIVEYHPGLDNGHHPENELKVIPESLCQHSTPR
Ga0065712_102749922	3300005290	Miscanthus Rhizosphere	MKDAHETLKPGTHVQVLTKKQVDGKSICGTIISSAANAPGTYVVEYHPGLDNGQHSENELQVIAESLCAHSTPRPF*
Ga0065705_111505041	3300005294	Switchgrass Rhizosphere	MFKDARETLKPGTHVEVLSKKQVDGKSLCGTIIGASANALGTYIVEYHPGLDNGQHSEDDLKVIPESLCQHSTPRPF*
Ga0070676_115002871	3300005328	Miscanthus Rhizosphere	MIKDPHETLKPGTHVEVLTKKQVDGNSLCGTIIGVAANALGTYVVEYHPGLDNGQHPENELKVIPESLCKHSTPRPF*
Ga0070670_1000258616	3300005331	Switchgrass Rhizosphere	MVKDTHETLKPGTHVEVLSKKQVDGKSLCGTIIGVAANALGTYIVEYHPGLDNGQHLENELKVIPESLCQHSTPRPF*
Ga0070670_1004214182	3300005331	Switchgrass Rhizosphere	MLKDTHETLKPGTHVEVLSKKQVDGKSLCGTIIGVAANVLGTYIVEYHPGLDNGHHPENELKVIPESLCQHSTPRPF*
Ga0070666_111139632	3300005335	Switchgrass Rhizosphere	MLDMKDAHETLKPGTHVQVLTKKQVDGKNICGTIISSAANAPGTYVVEYHPGLDNGQHSENELQVIAESLCAHSTPRPF*
Ga0068868_1002503072	3300005338	Miscanthus Rhizosphere	MLDMKDAHETLKPGTHVQVLTKKQVDGKSICGTIISSAANAPGTYVVEYHPGLDNGQHSENELQVIAESLCAHSTPRPF*
Ga0070669_1008899941	3300005353	Switchgrass Rhizosphere	MMLKETDETLKPGTHVEVLSKKQVDGKMLCGTIIGAAANVLGTYIVEYHPGLDNGHHSEKELKVIPESLCQHSTPRPF*
Ga0070675_1000727615	3300005354	Miscanthus Rhizosphere	MLDKKDTHETLKPGTHVEVLSKKQVDGKSLCGTIITAAPNVAGTYVVEYHPGLDNGSHSENELKVIPESSCQHSTPRPF*
Ga0070675_1001556422	3300005354	Miscanthus Rhizosphere	MFANEDAHGTLKPGTHMEVLTKKQLDGKGLCGTILSAAPNVPGTYVVEYHPGLDNGSHSENELQVITKSACRYSTPRPF*
Ga0070671_1001491211	3300005355	Switchgrass Rhizosphere	MLDMKDAHETLKPGTHVQVLTKKQVDGKSICGTIISSAANAPGTYVVEYHPGLDNGQHSENELQVIAE
Ga0070674_1004162591	3300005356	Miscanthus Rhizosphere	MLDKKDTHETLKPGTHVEVLSKKQVDGKSLCGTIITAAPNVAGTYVVEYHPGLDNGSHSENELKVIPESFCQHSTPRPF*
Ga0070688_1000487113	3300005365	Switchgrass Rhizosphere	MKDAHETLKPGTHVQVLTKKQVDGKNICGTIISSAANAPGTYVVEYHPGLDNGQHSENELQVIAESLCAHSTPRPF*
Ga0070704_1001249191	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	EMVDKKYTHETLKPGTYVEVLSKKQVDGKNLCGTIITAAPDDPGTYVVEYHPGLGNGHHSENELQVIPRFLCQHSTPRPF*
Ga0070704_1020743092	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	VIPGECGENKMFDKEDTRETLKPGTHVEVLTKKQVDGKSLCGTIITAAPDVPGTYIVEYHPGLDNGSHSENELQVIPDSLCRHSTPRPF*
Ga0068857_1004171742	3300005577	Corn Rhizosphere	MFDTTDTHGTLKPGTHVKVLNKKQVDGQSLCGTIVTAAPNLADIYIVEYHPGLDNGYHSENELQVIPESLCQHSTPRPF*
Ga0068857_1018765132	3300005577	Corn Rhizosphere	MLKDTHETLKPGTHVEVLSKKQVDGKSLCGTIIGVAANVLGTYIVEYHPGLDNGHHPENELKVIPESLCQHSTPR
Ga0068859_1015411101	3300005617	Switchgrass Rhizosphere	HEYGENEMFDTTDTHGTLKPGTHVKVLNKKQVDGQNLCGTIVTAAPNLADIYVVEYHPGLDNGYHSENELQVIPESLCQHSTPRPF*
Ga0068870_113242492	3300005840	Miscanthus Rhizosphere	MFDTTDTHGTLKPGTHVKVLNKKQVDGQNLCGTIVTAAPNLADIYVVEYHPGLDNGYHSENELQVIPESLCQHSTPRPF*
Ga0068863_1013069522	3300005841	Switchgrass Rhizosphere	MLDNKVPHETLKPGTHVMVLSKKQVDGKSLCGTIITAAPTVPGTYIVEYHPGLDNGSHSENELQVIPESLCQHSTPRPF*
Ga0068862_1019466281	3300005844	Switchgrass Rhizosphere	TLKPGTHVEVLTKKQVDGNCLCGTIIGVAANTLGTYVVEYHPGLDNGQHPENELKVIPESLCKHSTPRPF*
Ga0066652_1005462062	3300006046	Soil	MLDNKDTHETLKPGTHVEVLSKKQVDGKSLCGTIITAAPDVPGTYIVEYHPGLDNGSHSENELQVIPESLCQHSTPRPF*
Ga0075422_100297421	3300006196	Populus Rhizosphere	MFKDTHETLKPGTHVEVLSKKQVDGKSLCGTIIGVAPNVLGTYIVEYHPGLDNGHHPENELKVIPESLCQHSTPRPF*
Ga0075421_1010096171	3300006845	Populus Rhizosphere	MLKDTHETLKPGTHVEVLSKKQVDGKSLCGTIIGAAANVLGTYIVEYHPGLDNGHHSENELKVIPESLCQHS
Ga0075433_111346942	3300006852	Populus Rhizosphere	MLKDTHETLKPGTHVEVLSKKQVDGKSLCGTIIGAAANVLGTYIVEYHPGLDNGHHSENELKVIPESLCQHSTPRPF*
Ga0079217_115598162	3300006876	Agricultural Soil	MLEDIHETLKPGTHVEVLTKKQVDGKSLCGTILGAAPNVLGTYVVEYHPGLDNGHHSESELKVIPESLCQHSTPRPF*
Ga0079215_103888542	3300006894	Agricultural Soil	MLDTKDTHETLKPGTHVEVLTKKQVDGKSLCGTIIGVAANALGTYVVEYHPGLDNGQHSENELKVIPESLCQHSTPRPF*
Ga0079218_100170743	3300007004	Agricultural Soil	MLKDTHETLKPGTHVEVLTKKQVDGKSLCGTIIGVAANALGTYVVEYHPGLDNGQHSENELKVIPESLCQHSTPRPF*
Ga0079218_101918612	3300007004	Agricultural Soil	MRKDTHETLKPGTHVEVLSKKQVDGKSLCGTIIGVAANALGTYIVEYHPGLDNGQHSESELQVIPESLCQHSTPRPF*
Ga0079218_119172422	3300007004	Agricultural Soil	MLDIKDTPETLKPGTHVEVLSKKQVDGKSLCGTIITADPNAPGTYIVEYHPGVDNGSHPENELQVIPESLCQHSTP
Ga0111539_101075223	3300009094	Populus Rhizosphere	MLDNKDTHETLKPGTHVEVLTKKQVDGKSLCGTIITASPDVPGTYVVEYHPGLDNGSHAENELQVIPESSCQHSTPRPF*
Ga0111539_106509951	3300009094	Populus Rhizosphere	MLKETDETFKPGTHVEVLTKKQVDGKMLCGTIIGAAANVLGTYIVEYHPGLDNGHHSENELKVIPESLCQHSTPRPF*
Ga0114129_106237092	3300009147	Populus Rhizosphere	MLKDTHETLKPGTHVEVLSKKQVDGKSLCGTIIGAAANVLGTYIVEYHPGLDNGHHPENELKVIPESLCQHSTPRPF*
Ga0105243_121910131	3300009148	Miscanthus Rhizosphere	MMLKETDETLKPGTHVEVLSKKQVDGKMLCGTIIGAAANVLGTYIVEYHPGLDNGHHSENELKVIPESLCQHSTPRPF*
Ga0111538_104483371	3300009156	Populus Rhizosphere	MRNIENTHETLKPGTHVEVLTKKQTDGQTLCGTIIGGAPNDPDTYVVAYHPGMDNGHHSEDELKVTPESSCQHSTPRPF*
Ga0111538_115713992	3300009156	Populus Rhizosphere	MLDIKETPETLKPGTHVEVLTKKQVDGKSLCGTIIGAAPNEPGTYVVEYHPGLDNGHHPENELKVI
Ga0105242_100187055	3300009176	Miscanthus Rhizosphere	MFDKKDTRETLKPGTHVEVLSKKQADGKSLCGTIITAAPDVPDTYIVEYHPGLDNGSHSESELEVIPESLCQHSTPRPF*
Ga0105248_103921671	3300009177	Switchgrass Rhizosphere	MIKDPHETLKPGTHVEVLTKKQVDGNSLCGTIIGVAANAPGTYVVEYHPGLDNGQHPENELKVIPESLCKHSTPRP
Ga0105249_100632963	3300009553	Switchgrass Rhizosphere	MIKDLHETFKPGTHVEVLSKKQVDGKRLCGTIIGVAANALGTYVVEYHPGLDNGQHPENELKVIPESLCKHSTPRPF*
Ga0105249_121738781	3300009553	Switchgrass Rhizosphere	KETDETFKPGTHVEVLSKKQVDGKMLCGTIIGAAANVLGTYIVEYHPGLDNGHHSENELKVIPESLCQHSTPRPF*
Ga0134124_119323482	3300010397	Terrestrial Soil	GGTRIMLKNTPENEMLKPGTHVEVINKKKVDGKILCGTIIGAAPNVIGSYIVEYHPGLDNGHHSENELKVVPESFCQHSTPRPF*
Ga0134122_120912452	3300010400	Terrestrial Soil	LSACSGKPEGEQMFDNKDTRETLKPGTHVEVVGKKGVDGKSVCGTILTASPTVPDTYVVEYHPGLDNGSHPEYELKVISESLCKHSTPRPF*
Ga0134121_104566002	3300010401	Terrestrial Soil	MLDMKDAHETLKPGTHVQVLTKKQVDGKSLCGTIITAAADEPGTYIVEYHPGLDNGSHPESELHVIPESSCQHSTPRPF*
Ga0134123_113270971	3300010403	Terrestrial Soil	MFDNKDTHETLKPGTHVEVLSKKQVDGKSLCGTIITAAPNAPGTYIVEYHPGLDNGSHSEDELKVIPESLCQHSTPRPF*
Ga0105246_120868582	3300011119	Miscanthus Rhizosphere	TTDTHGTLKPGTHVKVLNKKQVDGQNLCGTIVTAAPNLADIYVVEYHPGLDNGYHSENELQVIPESLCQHSTPRPF*
Ga0137427_104291791	3300011445	Soil	MLDKKDTHETLKPGTHVEVLSKKQVDGKSLCGTIITAAPNVPGTYVVEYHPGLDNGSHSENELQVIPESHCQHSTPRPF*
Ga0137349_10693802	3300012160	Soil	MFDTKDTPETLKPGTHVEVLSKKQVDGKSLCGTIITADPNAPGTYIVEYHPGLDNGSHPENELQVISESLCQHSTPRPF*
Ga0150984_1103392752	3300012469	Avena Fatua Rhizosphere	MLDIKDPHETLKPGTHVKVLSKKQVDGKSLCGTIITAAPDNSGSYVVEYHPGLDNGHHSENELEVIPESLCQHSTPRPF*
Ga0157375_122763232	3300013308	Miscanthus Rhizosphere	GTHVEVLSKKQVDGKSLCGTIITAAPNVAGTYVVEYHPGLDNGSHSENELKVIPESSCQHSTPRPF*
Ga0163163_111738821	3300014325	Switchgrass Rhizosphere	DTHETLKPGTHVEELSKKQVDGKSLCGTIIGADPHIPGTYVVEYHPGLDNGHHPENELQVLPESFCEHSTPRPF*
Ga0157380_118268081	3300014326	Switchgrass Rhizosphere	MLDNKDTHETLKPGTHVEVLTKKQVDGKSLCGTIITAAPDEPGTYVVEYHPGLDNGSHSENELQVIPESLCQHST
Ga0157377_102990232	3300014745	Miscanthus Rhizosphere	MCGKPCASWEEEEQNMLKDTHETLKPGTHVEVLSKKQVDGKSLCGTIIGVAANVLGTYIVEYHPGLDNGHHPENELKVIPESLCQHSTPRPF*
Ga0157377_107705411	3300014745	Miscanthus Rhizosphere	YVEVLSKKQVDGKNLCGTIITAAPDDPGTYVVEYHPGLGNGHHSENELQVIPRFLCQHSTPRPF*
Ga0157376_122928451	3300014969	Miscanthus Rhizosphere	MCKVSNEGAIMVNDTHETLKPGTHVEVLSKKQVDGKSLCGTIIGADPNERDTYVVEYHPGLDNGHHSQNELKVIPESLCQHSTPRPF*
Ga0157376_124904121	3300014969	Miscanthus Rhizosphere	THETLKPGTHVEVLSKKQVDGKSLCGTIVTAAPDVLGTYIVEYHPGLDNGSHSENELRVIPESLCQHSTPRPF*
Ga0173483_102382222	3300015077	Soil	MIKDLHETFKPGTHVEVLSKKQVDGNSLCGTIIGVAANAPGTYVVEYHPGLDNGQHPENELKVIPESLCKHSTPRPF*
Ga0173480_106904901	3300015200	Soil	MCGKPCASWEEKEKIMLKDTHETFKPGTHVEVLSKKQVDGKSLCGTIIGVAANVLGTYIVEYHPGLDNGHHPENELKVIPESLCQHSTPRPF*
Ga0173478_100411853	3300015201	Soil	MIKDPHETLKPGTHVEVLTKKQVDGNCLCGTIIGVAANTPGTYVVEYHPGLDNGQHPENELKVIPESLCKHSTPRPF*
Ga0132258_102885522	3300015371	Arabidopsis Rhizosphere	MVKDIHETLKPGTHVEVLSKKQIDGKSLCGTIIGVAANSLGTYVVEYHPGLDNGQHRENELKVIPASLC*
Ga0132258_109607713	3300015371	Arabidopsis Rhizosphere	MNNETRETLKPGTHVQVLSKQQVDGKTLCGTIIGAAPDILGTYIVEYHPGLDNGQHPENELRVIPKSACQHSTPRPF*
Ga0132258_111310734	3300015371	Arabidopsis Rhizosphere	PGTHVEVLSKKQVDGKRLCGTIISAAPNVAGTYIVEYHPGLDNGYHSENELQVISESVCQHSTPRPF*
Ga0132256_1037950671	3300015372	Arabidopsis Rhizosphere	MPKDTHETLKPGTHVEVLSKKQVDGKSLCGTIITAAPDVPGTYIVEYHPGLDNGSHSENELQVIPESLCQHSTPRPF*
Ga0132255_1012945441	3300015374	Arabidopsis Rhizosphere	MVKDIHETLKPGTHVEVLSKKQIDGKSLCGTIIGAAANSLGTYVVEYHPGLDNGQHRENELKVIPASLCQHSTPRPF*
Ga0132255_1046332292	3300015374	Arabidopsis Rhizosphere	MLDIKDTSETLKPGTHVEVLSKKQVDGKRLCGTIISAAPNVAGTYIVEYHPGLDNGYHSENELQVISESVCQHSTPRPF*
Ga0132255_1047680481	3300015374	Arabidopsis Rhizosphere	MYGMPCAFKVEEGSEGSMPKDAYETLKPGTHVEVLNKKQVDGEVLCGTIIGVAPNAIGTYVVEYHPGVDNGQHSESELKVIPATSC
Ga0132255_1048412882	3300015374	Arabidopsis Rhizosphere	MEKKMFGMKDTHETLKPGTHVQVLTKKQVDGKSICGTIIGSAANAPGTYVVEYHPGLDNGQHSENELQVIA
Ga0163161_100972153	3300017792	Switchgrass Rhizosphere	MKDAHETLKPGTHVQVLTKKQVDGKSICGTIIGVAANAPGTYVVEYHPGLDNGQHSENELQVIAESLCAHSTPRPF
Ga0184628_105357872	3300018083	Groundwater Sediment	MFDNRDTRETLKPGTHVEVLSKKQVDGKSLCGTIITAAPNVAGTYVVEYHPGLDNGSHSENELKVIPESFCQHSTPRPF
Ga0190270_114493701	3300018469	Soil	MRIDTHETLKPGTHVEVLSKKQVDGKSLCGTIIGVAANALGTYVVEYHPGLDNGQHSESELQVIPESLCQHSTPRPF
Ga0190274_100172074	3300018476	Soil	MFENKDTPETLKPGTHVEVLSKKQVDGKSLCGTIINADPNAPGTYIVEYHPGLDNGSHPENELQVISESLCQHSTPRPF
Ga0190271_122659302	3300018481	Soil	MRKDTHETLKPGTHVEVLTKKQIDGKSLCGTIIGVAANALGTYVVEYHPGLDNGQHSESELQIIPESLCQHSTPRPF
Ga0184641_11604771	3300019254	Groundwater Sediment	MLDSKDTHETLKPGTHVEVLNKKQVDGKTLCGTIITAAPNAPGTYIVEYHPGLDNGSHSENELQVIPESLCKHLTPRPF
Ga0184643_14884101	3300019255	Groundwater Sediment	MLDNKDTHETLKPGTHVEVLSKKQVDGKSLCGTIITAAPNVPGTYVVEYHPGLDNGSHSENELQVIPESLCQHLTPRPF
Ga0184642_14714392	3300019279	Groundwater Sediment	MLDNKDTHETLKPGTHVEVLSKKQVDGKSLCGTIIGAAANALGTYIVEYHPGLDNGQHSENELQVIPESLCQHSTPRPF
Ga0173481_106305711	3300019356	Soil	MIKDLHETFKPGTHVEVLSKKQVDGNCLCGTIIGVAANAPGTYVVEYHPGLDNGQHPENELKVIPESLCKHSTPRPF
Ga0173479_100570623	3300019362	Soil	MIKDPHETLKPGTHVEVLTKKQVDGNSLCGTIIGVAANAPGTYVVEYHPGLDNGQHPENELKVIPESLCKHSTPRPF
Ga0247787_10444622	3300022893	Soil	MFKDTHETLKPGTHVEVLSKKQVDGKSLCGTIIGVAANVLGTYIVEYHPGLDNGHHPENELKVIPES
Ga0247791_10305752	3300023062	Soil	MIKDPHETLKPGTHVEVLTKKQVDGNSLCGTIIGVAANAVGTYVVEYHPGLDNGQHPENELKVIPESLCKHSTPRPF
Ga0207680_102749092	3300025903	Switchgrass Rhizosphere	MLDMKDAHETLKPGTHVQVLTKKQVDGKNICGTIISSAANAPGTYVVEYHPGLDNGQHSENELQVIAESLCAHSTPR
Ga0207645_108804912	3300025907	Miscanthus Rhizosphere	MMLKETDETLKPGTHVEVLSKKQVDGKMLCGTIIGAAANVLGTYIVEYHPGLDNGHHSEKELKVIPESLCQHSTPRPF
Ga0207662_103503382	3300025918	Switchgrass Rhizosphere	MVDKKYTHETLKPGTYVEVLSKKQVDGKNLCGTIITAAPDDPGTYVVEYHPGLGNGHHSENELQVIPRFLCQHSTP
Ga0207681_101315552	3300025923	Switchgrass Rhizosphere	MLDMKDAHETLKPGTHVQVLTKKQVDGKNICGTIISSAANAPGTYVVEYHPGLDNGQHSENELQVIAESLCAHSTPRPF
Ga0207650_101193852	3300025925	Switchgrass Rhizosphere	MVKDTHETLKPGTHVEVLSKKQVDGKSLCGTIIGVAANALGTYIVEYHPGLDNGQHLENELKVIPESLCQHSTPRPF
Ga0207650_109244032	3300025925	Switchgrass Rhizosphere	MLKDTHETLKPGTHVEVLSKKQVDGKSLCGTIIGVAANVLGTYIVEYHPGLDNGHHPENELKVIPESLCQHSTPRPF
Ga0207659_100456822	3300025926	Miscanthus Rhizosphere	MLDKKDTHETLKPGTHVEVLSKKQVDGKSLCGTIITAAPNVAGTYVVEYHPGLDNGSHSENELKVIPESSCQHSTPRPF
Ga0207659_100974582	3300025926	Miscanthus Rhizosphere	MFANEDAHGTLKPGTHMEVLTKKQLDGKGLCGTILSAAPNVPGTYVVEYHPGLDNGSHSENELQVITKSACRYSTPRPF
Ga0207659_107793282	3300025926	Miscanthus Rhizosphere	MFDTTDTHGTLKPGTHVKVLNKKQVDGQNLCGTIVTAAPNLADIYVVEYHPGLDNGYHSENELQVIPESLCQHSTPRPF
Ga0207701_1000612316	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MVDKKYTHETLKPGTYVEVLSKKQVDGKNLCGTIITAAPDDPGTYVVEYHPGLGNGHHSENELQVIPRFLCQHSTPRPF
Ga0207701_107355812	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	TLKPGTHVEVLSKKQVDGKSLCGTIITAAPNVAGTYVVEYHPGLDNGSHSENELKVIPESSCQHSTPRPF
Ga0207686_100963492	3300025934	Miscanthus Rhizosphere	MFDKKDTRETLKPGTHVEVLSKKQADGKSLCGTIITAAPDVPDTYIVEYHPGLDNGSHSESELEVIPESLCQHSTPRPF
Ga0207669_104581931	3300025937	Miscanthus Rhizosphere	MLDKKDTHETLKPGTHVEVLSKKQVDGKSLCGTIITAAPNVAGTYVVEYHPGLDNGSHSENELKVIPESFCQHSTPRPF
Ga0207704_114366561	3300025938	Miscanthus Rhizosphere	KETDETLKPGTHVEVLSKKQVDGKMLCGTIIGAAANVLGTYIVEYHPGLDNGHHSENELKVIPESLCQHSTPRPF
Ga0207691_100361394	3300025940	Miscanthus Rhizosphere	MKDAHETLKPGTHVQVLTKKQVDGKNICGTIISSAANAPGTYVVEYHPGLDNGQHSENELQVIAESLCAHSTPRPF
Ga0207711_114871802	3300025941	Switchgrass Rhizosphere	MLDMKDAHETLKPGTHVQVLTKKQVDGKSICGTIISSAANAPGTYVVEYHPGLDNGQHSENELQVIAESLCAHSTPRPF
Ga0207712_119994041	3300025961	Switchgrass Rhizosphere	MLDKKDTHETLKPGTHVEVLSKKQVDGKTLCGTIITAAPDDPGTYVVEYHPGLGNGHHSENELQVIPRFLCQHSTPRPF
Ga0207641_112969801	3300026088	Switchgrass Rhizosphere	MLDNKVPHETLKPGTHVMVLSKKQVDGKSLCGTIITAAPTVPGTYIVEYHPGLDNGSHSENELQVIPESLCQHSTPRPF
Ga0207676_106367361	3300026095	Switchgrass Rhizosphere	MQNETRETLKPGTHVQVLSKQQVDGKTLCGTIIGAAPDILGSYIVEYHPGLDNGQHPENELRVIPKSACQHSTPRPF
Ga0207674_109851291	3300026116	Corn Rhizosphere	MIKDPHETLKPGTHVEVLTKKQVDGNSLCGTIIGVAANALGTYVVEYHPGLDNGQHPENELKVIPESLCKHSTPRPF
Ga0209486_100371852	3300027886	Agricultural Soil	MLKDTHETLKPGTHVEVLTKKQVDGKSLCGTIIGVAANALGTYVVEYHPGLDNGQHSENELKVIPESLCQHSTPRPF
Ga0209486_100969412	3300027886	Agricultural Soil	MRKDTHETLKPGTHVEVLSKKQVDGKSLCGTIIGVAANALGTYIVEYHPGLDNGQHSESELQVIPESLCQHSTPRPF
Ga0207428_100167873	3300027907	Populus Rhizosphere	MFKDTHETLKPGTHVEVLSKKQVDGKSLCGTIIGVAPNVLGTYIVEYHPGLDNGHHPENELKVIPESLCQHSTPRPF
Ga0207428_101952561	3300027907	Populus Rhizosphere	MLDNKDTHETLKPGTHVEVLTKKQVDGKSLCGTIITASPDVPGTYVVEYHPGLDNGSHAENELQVIPESSCQHSTPRPF
Ga0308189_100873222	3300031058	Soil	MLDNKDTHETLKPGTHVEVLSKKQVDGKSLCGTIITAAPNAPGTYIVEYHPGLDNGSHSESELQVIPESLCQHLTPRPF
Ga0308189_104202961	3300031058	Soil	MFENDDRHETLKPGTHVQVLSKKQVDGENLCGTILSAAPNTPGTYIVEYHPGMDNGSHPENELQVSPESLCKHLTP
Ga0308197_104654891	3300031093	Soil	MLDNKDSHETLKPGTHVEVLSKKQVDGKSLCGTIITAAPNVPGTYIVEYHPGLDNGSHSESELQVIPESLCQHSTPRPF
Ga0308187_104926212	3300031114	Soil	MLDNKDTHETLKPGTHVEVLTKKQVDGKSLCGTIITAAPNAPGTYIVEYHPGLDNGYHSENELQVMPESFCQHSTPRPF
Ga0310887_102591942	3300031547	Soil	MLKETDETFKPGTHVEVLTKKQVDGKMLCGTIIGAAANVLGTYIVEYHPGLDNGHHSENELKVIPESLCQHSTPRP
Ga0310886_109684391	3300031562	Soil	MLKETDETFKPGTHVEVLTKKQVDGKMLCGTIIGAAANVLGTYIVEYHPGLDNGHHSENELKVIPESLCQHSTPRPF
Ga0310901_104953201	3300031940	Soil	VEVLSKKQVDGKSLCGTIIGVAANVLGTYIVEYHPGLDNGHHSENELKVIPESLCQHSTPRPF
Ga0310884_100173631	3300031944	Soil	MLKETDETFKPGTHVEVLSKKQVDGKMLCGTIIGAAANVLGTYIVEYHPGLDNGHHPENELKVIPESLCQHSTPRP
Ga0310903_106493931	3300032000	Soil	MIQDLHETLKPGTHVEVLSKKQVDGNSLCGTIIGVAANAVGTYVVEYHPGLDNGQHPENELKVIPESLCKHSTPRPF
Ga0310902_102611292	3300032012	Soil	MLKETDETFKPGTHVEVLSKKQVDGKMLCGTIIGAAANVLGTYIVEYHPGLDNGHHPENELKVIPESLCQHSTPRPF
Ga0310906_107495711	3300032013	Soil	MLKDTHDTFKPGTHVEVLSKKQVDGKSLCGTIIGAAANVLGSYIVEYHPGLDNGQHSENELKVIPESLCQHSTPRPF
Ga0310899_101566912	3300032017	Soil	MLKETDETFKPGTHVEVLSKKQVDGKSLCGTIIGAAANVLGSYIVEYHPGLDNGQHSENELKVIPESLCQHSTPRPF
Ga0310899_107389201	3300032017	Soil	MLDNKETHETLKPGTHVEVLSKKQVDGKSLCGTIITAAPDVPGTYVVEYHPGLDNGSHSENELRVIPESLCQHSTPRPF
Ga0310895_106693442	3300032122	Soil	MLKDTHDTFKPGTHVEVLSKKQVDGKSLCGTIIGVAANVLGTYIVEYHPGLDNGHHSENELKVIPESLCQHSTPRPF
Ga0315912_100247345	3300032157	Soil	MLKTNDTPDTLKPGTHVEVLSKKQVDGDTLCGTIVGADPNQLGTYVVEYHPGVDNGHHPENELKVISESECRHSTPRPF
Ga0315912_103305311	3300032157	Soil	MHDMKDAHETLKPGTHVEVLNKKQVDGESLCGTIIGAAPANLGTNIVKYHPGIDNGYHAENDLRVIPESQCKHSTPRPF
Ga0310896_109219601	3300032211	Soil	KDTHDTFKPGTHVEVLSKKQVDGKSLCGTIIGAAANVLGSYIVEYHPGLDNGHHPENELKVIPESLCQHSTPRPF
Ga0310812_100579313	3300032421	Soil	LQYSLSMCVRSVASRVQLKEEGEQEMMIDDTRDTLKPGTHVQVLSKKQVDGKSLCGTIIGAAANVLGSYVVEYHPGLDNGQHAENELKVIPESCPHSTPRPF

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.60
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.60
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F061964

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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