Metagenome / Metatranscriptome Family F061948

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F061948
Family Type	Metagenome / Metatranscriptome
Number of Sequences	131
Average Sequence Length	110 residues
Representative Sequence	MGLRTTWEKLYRAVATLATADAPLKERLASAFHSHLLGLTPQDFADGGLQTDFESLYVNAETGKVLRTEWLSEEECQRAAETILHLFVEVTRTIEQEDFEGWLKNRLLGGS
Number of Associated Samples	84
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	78.63 %
% of genes near scaffold ends (potentially truncated)	25.19 %
% of genes from short scaffolds (< 2000 bps)	91.60 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.76

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (54.198 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (32.061 % of family members)
Environment Ontology (ENVO)	Unclassified (42.748 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (39.695 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.40% β-sheet: 0.00% Coil/Unstructured: 44.60%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.76
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.76
Powered by PDBe Molstar

SCOP family	SCOP domain	Representative PDB	TM-score
a.24.12.0: automated matches	d7bmla_	7bml	0.66466
a.111.1.3: Chloroperoxidase	d1vnsa_	1vns	0.66263
f.13.1.0: automated matches	d7crja_	7crj	0.6611
f.14.1.3: Transient receptor potential (TRP) channels	d5vkqa2	5vkq	0.64416
a.113.1.1: DNA repair protein MutS, domain III	d1wb9a1	1wb9	0.64381

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF02954	HTH_8	12.98
PF00990	GGDEF	5.34
PF16036	Chalcone_3	4.58
PF00571	CBS	3.82
PF02163	Peptidase_M50	3.05
PF12146	Hydrolase_4	3.05
PF00166	Cpn10	3.05
PF05726	Pirin_C	2.29
PF00313	CSD	2.29
PF00690	Cation_ATPase_N	2.29
PF08447	PAS_3	2.29
PF00561	Abhydrolase_1	2.29
PF07883	Cupin_2	1.53
PF00126	HTH_1	1.53
PF00923	TAL_FSA	0.76
PF13545	HTH_Crp_2	0.76
PF09364	XFP_N	0.76
PF01556	DnaJ_C	0.76
PF01435	Peptidase_M48	0.76
PF04972	BON	0.76
PF03446	NAD_binding_2	0.76
PF00004	AAA	0.76
PF01432	Peptidase_M3	0.76
PF03466	LysR_substrate	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG0234	Co-chaperonin GroES (HSP10)	Posttranslational modification, protein turnover, chaperones [O]	3.05
COG0474	Magnesium-transporting ATPase (P-type)	Inorganic ion transport and metabolism [P]	2.29
COG1741	Redox-sensitive bicupin YhaK, pirin superfamily	General function prediction only [R]	2.29
COG0176	Transaldolase/fructose-6-phosphate aldolase	Carbohydrate transport and metabolism [G]	0.76
COG0339	Zn-dependent oligopeptidase, M3 family	Posttranslational modification, protein turnover, chaperones [O]	0.76
COG0484	DnaJ-class molecular chaperone with C-terminal Zn finger domain	Posttranslational modification, protein turnover, chaperones [O]	0.76
COG1164	Oligoendopeptidase F	Amino acid transport and metabolism [E]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	54.20 %
Unclassified	root	N/A	45.80 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	54.20 %
Unclassified	root	N/A	45.80 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	54.20 %
Unclassified	root	N/A	45.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	16.03 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	6.11 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.80 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	6.11 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	6.11 %
Zetaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Zetaproteobacteria	1.53 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.53 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.76 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.11 %
unclassified Zetaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Zetaproteobacteria → unclassified Zetaproteobacteria	1.53 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	1.53 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.76 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	0.76 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.11 %
Zetaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Zetaproteobacteria → unclassified Zetaproteobacteria → Zetaproteobacteria bacterium	1.53 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	1.53 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.76 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.76 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.11 %
Methylococcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylococcus	1.53 %
Zetaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Zetaproteobacteria → unclassified Zetaproteobacteria → Zetaproteobacteria bacterium	1.53 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	0.76 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.76 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.11 %
unclassified Methylococcus	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylococcus → unclassified Methylococcus	1.53 %
Zetaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Zetaproteobacteria → unclassified Zetaproteobacteria → Zetaproteobacteria bacterium	1.53 %
Burkholderia cepacia complex	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Burkholderia cepacia complex	0.76 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.76 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.11 %
Methylococcus sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylococcus → unclassified Methylococcus → Methylococcus sp.	1.53 %
Zetaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Zetaproteobacteria → unclassified Zetaproteobacteria → Zetaproteobacteria bacterium	1.53 %
Burkholderia cepacia complex	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Burkholderia cepacia complex	0.76 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.76 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.76 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000550\|F24TB_12206631	Not Available	765	Open in IMG/M
3300001431\|F14TB_102690957	Not Available	795	Open in IMG/M
3300004114\|Ga0062593_101330141	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	763	Open in IMG/M
3300004480\|Ga0062592_102512332	Not Available	518	Open in IMG/M
3300005438\|Ga0070701_10172557	Not Available	1260	Open in IMG/M
3300005549\|Ga0070704_100966385	Not Available	769	Open in IMG/M
3300005577\|Ga0068857_100797329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Zetaproteobacteria → unclassified Zetaproteobacteria → Zetaproteobacteria bacterium	902	Open in IMG/M
3300005832\|Ga0074469_10165024	Not Available	505	Open in IMG/M
3300005844\|Ga0068862_100597357	Not Available	1059	Open in IMG/M
3300006224\|Ga0079037_100128757	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2181	Open in IMG/M
3300006224\|Ga0079037_100189209	All Organisms → cellular organisms → Bacteria → Proteobacteria	1838	Open in IMG/M
3300006224\|Ga0079037_102119031	Not Available	562	Open in IMG/M
3300006844\|Ga0075428_102446812	Not Available	535	Open in IMG/M
3300006880\|Ga0075429_101872270	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300006881\|Ga0068865_101596537	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300006969\|Ga0075419_10320526	All Organisms → cellular organisms → Bacteria	1049	Open in IMG/M
3300009053\|Ga0105095_10119317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1434	Open in IMG/M
3300009078\|Ga0105106_10299139	All Organisms → cellular organisms → Bacteria → Proteobacteria	1165	Open in IMG/M
3300009081\|Ga0105098_10257994	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	824	Open in IMG/M
3300009087\|Ga0105107_10124164	All Organisms → cellular organisms → Bacteria	1818	Open in IMG/M
3300009091\|Ga0102851_10308159	Not Available	1551	Open in IMG/M
3300009091\|Ga0102851_10388929	Not Available	1399	Open in IMG/M
3300009091\|Ga0102851_10498771	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1251	Open in IMG/M
3300009091\|Ga0102851_10558455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1188	Open in IMG/M
3300009091\|Ga0102851_11968100	Not Available	661	Open in IMG/M
3300009091\|Ga0102851_12615089	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300009111\|Ga0115026_10470617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	927	Open in IMG/M
3300009111\|Ga0115026_10609714	Not Available	830	Open in IMG/M
3300009111\|Ga0115026_11014728	Not Available	664	Open in IMG/M
3300009111\|Ga0115026_11936567	Not Available	503	Open in IMG/M
3300009131\|Ga0115027_11387531	Not Available	571	Open in IMG/M
3300009146\|Ga0105091_10046832	All Organisms → cellular organisms → Bacteria	1914	Open in IMG/M
3300009157\|Ga0105092_10126505	All Organisms → cellular organisms → Bacteria	1412	Open in IMG/M
3300009167\|Ga0113563_10194352	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2009	Open in IMG/M
3300009167\|Ga0113563_10416153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1439	Open in IMG/M
3300009167\|Ga0113563_12813331	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylococcus → unclassified Methylococcus → Methylococcus sp.	589	Open in IMG/M
3300009167\|Ga0113563_13692057	Not Available	518	Open in IMG/M
3300009168\|Ga0105104_10478954	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	699	Open in IMG/M
3300009179\|Ga0115028_11016475	Not Available	667	Open in IMG/M
3300009553\|Ga0105249_12092965	Not Available	639	Open in IMG/M
3300009755\|Ga0115592_1119955	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300011340\|Ga0151652_11044711	Not Available	1383	Open in IMG/M
3300011340\|Ga0151652_11465037	Not Available	687	Open in IMG/M
3300012931\|Ga0153915_10415431	All Organisms → cellular organisms → Bacteria	1525	Open in IMG/M
3300012931\|Ga0153915_11497475	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300012964\|Ga0153916_11691338	Not Available	706	Open in IMG/M
3300012964\|Ga0153916_13015408	Not Available	530	Open in IMG/M
3300013078\|Ga0153914_1115775	All Organisms → cellular organisms → Bacteria	2315	Open in IMG/M
3300013080\|Ga0153913_1044030	All Organisms → cellular organisms → Bacteria	1371	Open in IMG/M
3300014884\|Ga0180104_1006287	All Organisms → cellular organisms → Bacteria	2635	Open in IMG/M
3300014884\|Ga0180104_1175273	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300015259\|Ga0180085_1262188	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300019361\|Ga0173482_10216168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Zetaproteobacteria → unclassified Zetaproteobacteria → Zetaproteobacteria bacterium	795	Open in IMG/M
3300020063\|Ga0180118_1346954	All Organisms → cellular organisms → Bacteria → Proteobacteria	1436	Open in IMG/M
3300022185\|Ga0079039_1182318	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300022185\|Ga0079039_1406868	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300023102\|Ga0247754_1089334	Not Available	739	Open in IMG/M
3300023260\|Ga0247798_1061772	Not Available	529	Open in IMG/M
3300025324\|Ga0209640_10877143	Not Available	701	Open in IMG/M
3300025938\|Ga0207704_11421354	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300026116\|Ga0207674_10643562	Not Available	1024	Open in IMG/M
3300026118\|Ga0207675_100061080	All Organisms → cellular organisms → Bacteria → Proteobacteria	3518	Open in IMG/M
3300026348\|Ga0256813_1017381	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300026463\|Ga0256815_1013239	All Organisms → cellular organisms → Bacteria	843	Open in IMG/M
3300026535\|Ga0256867_10013856	All Organisms → cellular organisms → Bacteria	3495	Open in IMG/M
3300027675\|Ga0209077_1192634	Not Available	569	Open in IMG/M
3300027713\|Ga0209286_1207371	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	704	Open in IMG/M
3300027792\|Ga0209287_10178312	Not Available	808	Open in IMG/M
3300027811\|Ga0256868_10114822	Not Available	1191	Open in IMG/M
3300027843\|Ga0209798_10019420	All Organisms → cellular organisms → Bacteria	3641	Open in IMG/M
3300027871\|Ga0209397_10304355	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	763	Open in IMG/M
3300027877\|Ga0209293_10265716	All Organisms → cellular organisms → Bacteria → Proteobacteria	862	Open in IMG/M
3300027877\|Ga0209293_10577072	Not Available	593	Open in IMG/M
3300027900\|Ga0209253_10262409	All Organisms → cellular organisms → Bacteria	1355	Open in IMG/M
3300027900\|Ga0209253_10449367	Not Available	970	Open in IMG/M
3300027902\|Ga0209048_10523355	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300028592\|Ga0247822_10668354	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300030613\|Ga0299915_10112320	Not Available	1977	Open in IMG/M
3300032259\|Ga0316190_11128060	Not Available	511	Open in IMG/M
3300032260\|Ga0316192_10574384	Not Available	765	Open in IMG/M
3300032260\|Ga0316192_10577484	Not Available	762	Open in IMG/M
3300032263\|Ga0316195_10279030	Not Available	880	Open in IMG/M
3300032770\|Ga0335085_10576052	Not Available	1271	Open in IMG/M
3300033004\|Ga0335084_10141797	Not Available	2501	Open in IMG/M
3300033004\|Ga0335084_10320056	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1602	Open in IMG/M
3300033004\|Ga0335084_11002393	All Organisms → cellular organisms → Bacteria	841	Open in IMG/M
3300033004\|Ga0335084_11158423	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300033004\|Ga0335084_11339877	Not Available	711	Open in IMG/M
3300033408\|Ga0316605_10375056	All Organisms → cellular organisms → Bacteria	1276	Open in IMG/M
3300033408\|Ga0316605_10669114	Not Available	976	Open in IMG/M
3300033408\|Ga0316605_10689551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Burkholderia cepacia complex	963	Open in IMG/M
3300033408\|Ga0316605_11259420	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300033408\|Ga0316605_11845490	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300033413\|Ga0316603_10600594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1021	Open in IMG/M
3300033414\|Ga0316619_10060090	All Organisms → cellular organisms → Bacteria	2211	Open in IMG/M
3300033414\|Ga0316619_10203440	All Organisms → cellular organisms → Bacteria → Proteobacteria	1427	Open in IMG/M
3300033414\|Ga0316619_10206410	All Organisms → cellular organisms → Bacteria → Proteobacteria	1420	Open in IMG/M
3300033414\|Ga0316619_10238615	All Organisms → cellular organisms → Bacteria → Proteobacteria	1342	Open in IMG/M
3300033414\|Ga0316619_10885902	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	769	Open in IMG/M
3300033416\|Ga0316622_100137078	All Organisms → cellular organisms → Bacteria	2528	Open in IMG/M
3300033416\|Ga0316622_100238452	Not Available	1966	Open in IMG/M
3300033416\|Ga0316622_100290309	All Organisms → cellular organisms → Bacteria	1793	Open in IMG/M
3300033416\|Ga0316622_101127534	Not Available	917	Open in IMG/M
3300033416\|Ga0316622_101163895	All Organisms → cellular organisms → Bacteria	902	Open in IMG/M
3300033416\|Ga0316622_101266624	All Organisms → cellular organisms → Bacteria	862	Open in IMG/M
3300033416\|Ga0316622_101794335	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300033418\|Ga0316625_101077952	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300033418\|Ga0316625_101857520	Not Available	587	Open in IMG/M
3300033419\|Ga0316601_101538495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylococcus → unclassified Methylococcus → Methylococcus sp.	670	Open in IMG/M
3300033433\|Ga0326726_10148667	Not Available	2134	Open in IMG/M
3300033433\|Ga0326726_10590393	All Organisms → cellular organisms → Bacteria	1067	Open in IMG/M
3300033434\|Ga0316613_11297266	Not Available	502	Open in IMG/M
3300033480\|Ga0316620_11160437	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300033480\|Ga0316620_11381154	Not Available	694	Open in IMG/M
3300033481\|Ga0316600_11215182	Not Available	535	Open in IMG/M
3300033482\|Ga0316627_101748040	Not Available	638	Open in IMG/M
3300033485\|Ga0316626_11458084	Not Available	616	Open in IMG/M
3300033485\|Ga0316626_11703813	Not Available	569	Open in IMG/M
3300033485\|Ga0316626_11876659	Not Available	542	Open in IMG/M
3300033486\|Ga0316624_10652511	Not Available	921	Open in IMG/M
3300033486\|Ga0316624_11004292	Not Available	752	Open in IMG/M
3300033486\|Ga0316624_11444659	Not Available	631	Open in IMG/M
3300033487\|Ga0316630_11094834	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300033487\|Ga0316630_11704397	Not Available	573	Open in IMG/M
3300033489\|Ga0299912_11128710	Not Available	576	Open in IMG/M
3300033513\|Ga0316628_104391421	Not Available	500	Open in IMG/M
3300033521\|Ga0316616_100238492	All Organisms → cellular organisms → Bacteria	1859	Open in IMG/M
3300034056\|Ga0373893_057632	Not Available	542	Open in IMG/M
3300034090\|Ga0326723_0166939	Not Available	970	Open in IMG/M
3300034099\|Ga0373902_091207	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300034692\|Ga0373917_0062387	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.08%
Host-Associated	Host-Associated	7.63%
Engineered	Engineered	2.29%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	45.80%
Aquatic	Environmental → Aquatic	44.27%
Plants	Host-Associated → Plants	7.63%
Bioremediation	Engineered → Bioremediation	2.29%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	43.51%
Freshwater	Environmental → Aquatic → Freshwater	38.17%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.58%
Marine	Environmental → Aquatic → Marine	3.05%
Sediment	Environmental → Aquatic → Sediment	3.05%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.05%
Peat	Environmental → Terrestrial → Peat	2.29%
Metal	Engineered → Bioremediation → Metal	2.29%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	32.06%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	19.85%
Sediment	Environmental → Aquatic → Freshwater → Sediment	16.03%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	7.63%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.58%
Loam	Environmental → Terrestrial → Soil → Loam	3.82%
Coastal	Environmental → Aquatic → Marine → Coastal	3.05%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.05%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.05%
Lentic	Environmental → Aquatic → Freshwater → Lentic	2.29%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.29%
Unclassified	Engineered → Bioremediation → Metal → Unclassified	2.29%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	32.06%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	16.79%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	16.03%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.58%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.05%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	3.05%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.05%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	3.05%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.05%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.05%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	2.29%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.29%
Unclassified	Engineered → Bioremediation → Metal → Unclassified → Unclassified	2.29%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.53%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.53%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.76%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.76%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	32.06%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	12.98%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	7.63%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	7.63%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	3.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.05%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	2.29%
Worm Burrow	Environmental → Aquatic → Marine → Coastal → Sediment → Worm Burrow	2.29%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.29%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	2.29%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.29%
Sediment Slurry	Engineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry	2.29%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment	1.53%
Wetland	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Wetland	1.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.53%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.53%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.53%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.53%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.53%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.53%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.76%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.76%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment → Sediment	0.76%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.76%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005832	Microbial communities from Baker Bay sediment, Columbia River estuary, Washington - S.41_BBB	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009087	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009131	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1	Environmental	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009179	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009755	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_11_14_B (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300011340	Combined Assembly of Wetland Metatranscriptomes	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300013078	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013080	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300014884	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_1Da	Environmental	Open in IMG/M
3300015259	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_10D	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300020063	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT730_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022185	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023102	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S184-509B-5	Environmental	Open in IMG/M
3300023260	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S197-509C-6	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026348	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 7-17 C6	Environmental	Open in IMG/M
3300026463	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 7-17 CS6	Environmental	Open in IMG/M
3300026535	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (HiSeq)	Environmental	Open in IMG/M
3300027675	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027713	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027792	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027811	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT92D227 HiSeq	Environmental	Open in IMG/M
3300027843	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh (SPAdes)	Environmental	Open in IMG/M
3300027871	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027877	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027900	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300030613	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT92D227	Environmental	Open in IMG/M
3300032259	Coastal sediment microbial communities from Maine, United States - Eddy worm burrow 2	Environmental	Open in IMG/M
3300032260	Coastal sediment microbial communities from Maine, United States - Merrow Island worm burrow	Environmental	Open in IMG/M
3300032263	Coastal sediment microbial communities from Maine, United States - Phippsburg sediment 1	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033408	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCT	Environmental	Open in IMG/M
3300033413	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT	Environmental	Open in IMG/M
3300033414	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_B	Environmental	Open in IMG/M
3300033416	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_C	Environmental	Open in IMG/M
3300033418	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_A	Environmental	Open in IMG/M
3300033419	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCT	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033434	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_CT_b	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M
3300033481	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_CT	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M
3300033485	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D5_A	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300033487	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_A	Environmental	Open in IMG/M
3300033489	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT95D214	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M
3300034056	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A3A4.3	Engineered	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M
3300034099	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - B1A0.3	Engineered	Open in IMG/M
3300034692	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A1A0.3	Engineered	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F24TB_122066312	3300000550	Soil	VGSRQTWEKLYRAVHTLTVADAPLKERLGSAFRSDLLELTQEDFAEADLEHDFESLYVDAASGRALRTEWLSERECIHAGETILHLFIEITRKIEQEDFEGWLKNRLLGG*
F14TB_1026909572	3300001431	Soil	PKEEAVGSRQTWEKLYRAVHTLTVADAPLKERLGSAFRSDLLELTQEDFAEADLEHDFESLYVDAASGRALRTEWLSERECIHAGETILHLFIEITRKIEQEDFEGWLKNRLLGG*
Ga0062593_1013301412	3300004114	Soil	VAGASLARDSGATADAPLKERLASAFHSHLLGLTPQDLADADLQIDFESLYVNAESGKVLRTEWLSEAECQRAAETILHLFVEVTRVIEQQDFEGWLKNRLLGGS*
Ga0062592_1025123321	3300004480	Soil	MGLSSAWEKLYRAVVTLATADAPLKERLASAFHSHLLGLTPQDLADADLQIDFESLYVNAESGKVLRTEWLSEAECQRAAETILHLFVEVTRVIEQQDFEGWLKNRLLGGS*
Ga0070701_101725574	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	KLYRAVVTLATADAPLKERLASAFHSHLLGLTPQDLADADLQIDFESLYVNAESGKVLRTEWLSEAECQRAAETILHLFVEVTRVIEQQDFEGWLKNRLLGGS*
Ga0070704_1009663853	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	RAVVTLATADAPLKERLASAFHSHLLGLTPPDLADADLQIDFESLYVNAESGKVLRTEWLSEAECQRAAETILHLFVEVTRVIEQQDFEGWLKNRLLGGS*
Ga0068857_1007973292	3300005577	Corn Rhizosphere	MGLSTAWEKLYRAVATLATADAPLKDRLASAFHSHLLGLTPQDLADADLQIDFESLYVNAESGKVLRTEWLSEAECQRAAETILHLFVEVTRVIEQQDFEGWLKNRLLGGS*
Ga0074469_101650242	3300005832	Sediment (Intertidal)	MGLRNTWEKLYVAVQTLALTDAPLKERLGSAFHSSLLALTPRDFAEGDLQHDFESLYVDADSGRVLRTEWLSEEECRHAAETILHLFIEVTRTIEQEDFEGWLKNRLLGGA*
Ga0068862_1005973572	3300005844	Switchgrass Rhizosphere	LYRAVVTLATADAPLKERLASAFHSHLLGLTPQDLADADLQIDFESLYVNAESGKVLRTEWLSEAECQRAAETILHLFVEVTRVIEQQDFEGWLKNRLLGGS*
Ga0079037_1001287571	3300006224	Freshwater Wetlands	MGLRTTWEKLYRAVATLATADAPLKERLASAFHSHLLGLTPQDFADGGLQTDFESLYVNAETGKVLRTEWLSEEECQRAAETILHLFVEVTRTIEQEDFEGWLKNRLLGGS*
Ga0079037_1001892092	3300006224	Freshwater Wetlands	MGSRTTWEKLYGAVVALATADAPLKERLASAFHLHLLGLTPQDFADGGLQTDFESLYVSAETGRVLRTEWLSEDECQQAAETILHLFIEVTRTIEQEDFEGWLKNRLLGGS*
Ga0079037_1021190311	3300006224	Freshwater Wetlands	MALRTTWEQLYRAVVTLATADAPLKERLASAFHSHLLDLTPRDFADAGLQIDFESLYVNAETGKVLRTEWLSEGECQRAAQTILHLFIEVTRTIEQEDFEGWLKNRLLGGS*
Ga0075428_1024468122	3300006844	Populus Rhizosphere	MGLSAAWEKLYRAVATLATADAPLKERLATAFHTHLVGLTPQDLADADLQVDFESLYVNAESGKVLRTEWLSEAEYQRAAQTILHLFVEVTRIIEQQDFEGWLKNRLLGGS*
Ga0075429_1018722701	3300006880	Populus Rhizosphere	MSSRQTWEKLYRAVHTLTVANAPLRDRLGSAFRSDLVELTPLDFAEAELENDFESLYVDADSGRVLRTEWLSEAECTHAADTILHLFIEISRKIEQEDY
Ga0068865_1015965372	3300006881	Miscanthus Rhizosphere	VAGASLARDSGATADARLKERLASAFHSHLLGLTPQDLADADLQIDFESLYVNAESGKVLRTEWLSEAECQRAAETILHLFVEVTRVIEQQDFEGWLKNRLLGGS*
Ga0075419_103205262	3300006969	Populus Rhizosphere	VGSRQTWEKLYRAVHTLTVADAPLKERLGSAFRSDLLELTQQEFAEADLEHDFESLYVDAVSGRVLRTDWLSEQECTHAAETILHLFIEVTRKIEQEDFEGWLKNRLLGGA*
Ga0105095_101193172	3300009053	Freshwater Sediment	MGLRTTWEKLYRAVVTLATADAPLKERLASAMHSHLLGLTPKDFADGGLQVDFESLYVNAETGKVLRTEWLSEEECQRAARTILHLFVEVTRTIEQEDFEGWLKNRLLGGS*
Ga0105106_102991392	3300009078	Freshwater Sediment	MGLRATWEKLYRAVATLATADAPLKERLTSAFHSHLLGLTPQDFADGGLQTDFESLYVNAETGKVLRTEWLSEEECRRAAQTILHLFVEVTRTVEQEDFEGWLKNRLLGGS*
Ga0105098_102579942	3300009081	Freshwater Sediment	MGLRATWEKLYRAVAILATADAPLKERLTSAFHSQLLDLRTRDFEDRDLQVDFESLYVNSESGKVLRTEWLSEEECRRAAQTILHLFVEITRTVEQEDFEGWLKNRLLGGS*
Ga0105107_101241642	3300009087	Freshwater Sediment	MGLRTTWEKLYRAVVTLATADAPLKERLASAMHSHLLGLTPKDFADGGLQVDFESLYVNAETGKVLRTEWLSEEECQRAARTILHLFVEVTRTVEQEDFEGWLKNRLLGGS*
Ga0102851_103081592	3300009091	Freshwater Wetlands	MRLSATWEKLYLAVVTLVTADAPLKERLASAFHSQLLALRPQDLAEVGLRIDFESLYVNADTGKVLRTEWLSEEECQRAAQTILHLFVEVTRTIEQEDFEGWLKNRLLGGS*
Ga0102851_103889292	3300009091	Freshwater Wetlands	MGSRTTWEKLYGAVVTLATADAPLKERLGSAFHTRLLGLTPQDFADGGLQTDFESLYVSAETGRVLRTEWLSEDECQQAAETILHLFIEVTRTIEQEDFEGWLKNRLLGGS*
Ga0102851_104987712	3300009091	Freshwater Wetlands	MHILPKKGAEVQRPAHEQRSRLRRTEEAMDLRTTWEKLYRAVATLATADAPLKERLASAFRSHLLGLTPQEFADVGLQTDFESLYVNAETGKVLRTEWLSEEECQRAAETILHLFIEVTRTIEQEDFEGWLKNRLLGGS*
Ga0102851_105584552	3300009091	Freshwater Wetlands	VGIRTTWEKLYHAVGTLATADAPLKERLASAFHLHLLGLTPQDFADGGLQTDFESLYVNAETGKVLRTEWLSEEECRRAAETILHLFIEVTRTIEQEDFEGWLKNRLLGGS
Ga0102851_119681001	3300009091	Freshwater Wetlands	MGIRTTWEKLYHAVGTLATADEPLKERLASAFHLHLVGLTPQDFADGGLQTDFESLYVNAETGKVLRTEWLSDEECQRAAETILHLFIEVTRTIEQEDFEGWLKNRLLGGS*
Ga0102851_126150892	3300009091	Freshwater Wetlands	MGLRTTWERLYRAVATLATADAPLKERLASAFHSHLVGLTPQDFADGELQTDFESLYVSAETGKVLRTEWLSEEECQRAAETILHLFVEVTRTIEQ*
Ga0115026_104706172	3300009111	Wetland	DEPLKERLASAFHLHLLGLTPQDFADGGLQTDFESLYVNAETGKVLRTEWLSDEECQRAAETILHLFIEVTRTIEQEDFEGWLKNRLLGGS*
Ga0115026_106097141	3300009111	Wetland	PKKGAEVQRPAHEQRSRLRRTEEAMDLRTTWEKLYRAVATLATADAPLKERLASAFRSHLLGLTPQEFADVGLQTDFESLYVNAESGKVLRTEWLSEEECQHASQTILHLFVEVTRIIEQEDFEGWLKNRLLGGS*
Ga0115026_110147281	3300009111	Wetland	RTEDPMSLRTTWEKLYHAVATLATADTPLKERLASAFHAHLVDLTPQDFADGGLQSDFESLYVNAETGKVLRTEWLSEGECQRAAQTILHLFIEVTRTIEQEDFEGWLKNRLLGGS*
Ga0115026_119365671	3300009111	Wetland	VGIRTTWEKLYHAVGTLATADAPLKERLASAFHLHLLGLTPQDFADGGLQTDFESLYVNAETGKVLRTEWLSEEECRRAAQTILHLFIEITRTIEQEDFEGWLKNRLLGGS*
Ga0115027_113875311	3300009131	Wetland	MSLRTTWEKLYHAVATLATADTPLKERLASAFHAHLLDLTPQDFADEGLQSDFESLYVNAETGKVLRTEWLSEGECQRAAQTILHLFIEVTRTIEQEDFEGWLKNRLLGGS*
Ga0105091_100468323	3300009146	Freshwater Sediment	MGLKTAWEQLYRAVVTLATADAPLKERLASAFHSHLLDLTAKDFADAGLQIDFESLYVNAETGKVLRTEWLSEAECQQAAQTILHLFVEVTRTIEQEDFEGWLKNRLLGGS*
Ga0105092_101265052	3300009157	Freshwater Sediment	MGLKTAWEQLYRAVVTLATADAPLKERVASAFHSHLLGLTPKDFADGGLQIDFESLYVNAETGKVLRTEWLSEEECQRAARTILHLFVEVTRTVEQEDFEGWLKNRLLGGS*
Ga0113563_101943521	3300009167	Freshwater Wetlands	MGLRTTWEKLYRAVATLATADAPLKERLASAFRSHLLGLTPQEFADVGLQTDFESLYVNAETGKVLRTEWLSEEECQRAAETILHLFVEVTRTIEQEDFEGWLK
Ga0113563_104161532	3300009167	Freshwater Wetlands	MGIRTTWERLYHAVGTLTTADAPLKERLGSAFHLHLLGLTPQDFADEGLQTDFESLYVNAETGKVLRTDWLSEEECRRAAETILHLFIEVTRTIEQEDFEGWLKNRLLGGS*
Ga0113563_128133311	3300009167	Freshwater Wetlands	MGLRTTWEKLYRAVATLATADAPLKERLASAFHSHLRGLTPQDFADGGLQTDFESLYVNAESGKVLRTEWLSEEECQRAAQTILHLFVEVTRTIEQEDFEG
Ga0113563_136920571	3300009167	Freshwater Wetlands	TPTCSRSSRVESRRREEAMGSRTTWEKLYGAVVTLATADAPLKERLGSAFHTRLLGLTPQDFADGGLQTDFESLYVSAETGRVLRTEWLSEEECQRAAETILHLFIEVTRTIEQEDFEGWLKNRLLGGS*
Ga0105104_104789542	3300009168	Freshwater Sediment	MGLRATWEKLYRAVAILATADAPLKERLTSAFHSQLLDLRTRDFEDRDLQVDFESLYVNSESGKVLRTEWLSEEECRRAAQTILHLFVEITRTIEQEDFEGWLKNRLLGGS*
Ga0115028_110164751	3300009179	Wetland	MSLWNTWERLYLATRTWALTDAPLKERLGSAFHIHLVGLRPEDFADKGLKLDFESLYVDADSGRVLRTEWLSEEECRQAAETILHLLIEVTRAMEQEDFEGWLKNRLLGGA*
Ga0105249_120929652	3300009553	Switchgrass Rhizosphere	EEAMGLSSAWEKLYRAVVTLATADAPLKERLASAFHSHLLGLTPQDLADADLQIDFESLYVNAESGKVLRTEWLSEAECQRAAETILHLFVEVTRVIEQQDFEGWLKNRLLGGS*
Ga0115592_11199551	3300009755	Wetland	SLRTEEAMGSKITWEKLYGAVVTLATADAPLKERLASAFHLDLLGLTPQDFADGGLQTDFESLYVDAETGKVLRTEWLSEEECRQAAQTILHLFIEVTRTIEQEDFEGWLKNRLLGGS*
Ga0151652_110447113	3300011340	Wetland	MGLRHTWEKLYLAVRVLAAADVPLKERLRAAFHSHLLGLTLQDFAEAELQHDFESLYVNAESGKVLRTEWLSEDECRHAADTILHLFIEVTRALEQEDYEGWLKNRLLGGA*
Ga0151652_114650372	3300011340	Wetland	MSLWNTWERLYLAGRTLALTDAPLKERLGLAFHSHLVGLTPEDFADAGLKLDFESLYVDADSGNVLRTEWLSDEECQQAAETILHLLIEVTRAMEQEDFEGWLKNR
Ga0153915_104154311	3300012931	Freshwater Wetlands	MGLGTTWEQLYRAVVTLATADAPLKERLASAFHSHLLDLTPKDFADAGLQIDFESLYVDAETGKVLRTEWLSEEECQQAAQTILHLFVEVTRTIEQEDFEGWLKNRLLGGS*
Ga0153915_114974752	3300012931	Freshwater Wetlands	MHILPKQGAEVQRSAHEQRSRLRRTEEAMGLRTTWEKLYRAVATLATADAPLKERLASAFQSHLLGLTPQDFADADLQIDFESLYVNAESGKVLRTQWLSDEECQRAAQTILHLFVEVTRTVEQEDFEGWLKNRLLGGS*
Ga0153916_116913382	3300012964	Freshwater Wetlands	MGLRTSWEKLYGAVATLATADAPLKERLSSAFRSHLLGLTPQEFAEVGLQTDFESLYVNAESGKVLRTEWLSEEECQHAAQTILHLFVEVTRTIEQEDFEGWLKNRLLGGS*
Ga0153916_130154081	3300012964	Freshwater Wetlands	DAPLKERLASAFRSHLLGLTPQEFADVGLKTDFESLYMNAETGKVLRTEWLSEEECQQAAQTILRLFVEVTRTIEQEDFEGWLKNRLLGGS*
Ga0153914_11157754	3300013078	Freshwater Wetlands	MSLRQTWERLYRATHRLVVADAPLKERLGSAFHTHLAGVTPADFADGGLQLDFESLYVDADSGKVLRTEWLSEEECRQAAETILHLFIEVTRTIEQEDFEGWLKNRLLGGS*
Ga0153913_10440304	3300013080	Freshwater Wetlands	MSLRQTWERLYRATHRLVVADAPLKERLGSAFHTHLAGVTPADFADGGLQLDFESLYVDAESGKVLRTEWLSEEECRQAAETILHLFIEVTRTIEQEDFEGWLKNRLLGGS*
Ga0180104_10062872	3300014884	Soil	VGSRQTWEKLYRAVHTLTVADAPLKERLGSAFRSDLLGLTQQDFAEADLEHDFESLYVDAASGRVLRTEWLSERECTHAAETILHLFIEVTRKIEQEDFEGWLKNRLLGGA*
Ga0180104_11752732	3300014884	Soil	MGIRTTWERLYRAVGTMATADAPLKERLASAFHVHLLGLTPQDFADGGLQTDFESLYVNAETGKVLRTEWLSEEECRRAAETILHLFIEVTRTVEQEDFEGWLKNRLLGGS*
Ga0180085_12621881	3300015259	Soil	KDAWERLYRAVNTLATADAPLKERLGSAFHAHLLDLAPRDFAEGGLQTDFESLYVDAETGKVLRTEWLSEEECRQAAQTILHLFIEVTRTVEQEDFEGWLKNRLLGGS*
Ga0173482_102161681	3300019361	Soil	VAGASLARDSGATADAPLKERLASAFHSHLLGLTPQDLADADLQIDFESLYLNAESGKVLRTEWLSEAECQRAAETILHLFVEVTRVIEQQDFEGWLKNRL
Ga0180118_13469542	3300020063	Groundwater Sediment	MRSKDAWERLYRAVNTLATADAPLKERLGSAFHAHLLDLAPRDFAEGGLQTDFESLYVDAETGKVLRTEWLSEEECRQAAQTILHLFIEVTRTIEQEDFEGWLKNRLLGGS
Ga0079039_11823182	3300022185	Freshwater Wetlands	MGSRATWEKLYGAVATLTTADAPLKERLASAFHSHLLGLTAQEFADEGLQTDFESLYVNAESGKALRTEWLSEAECQRAAETILHLFVEVTRTIEQEDFEGWLKNRLLGGS
Ga0079039_14068682	3300022185	Freshwater Wetlands	MGSRTTWEKLYGAVVALATADAPLKERLASAFHLHLLGLTPQDFADGGLQTDFESLYVSAETGRVLRTEWLSEDECQQAAETILHLFIEVTRTIEQEDFEGWLKNRLLGGS
Ga0247754_10893342	3300023102	Soil	VAGASLARDSGATADAPLKERLASAFHSHLLGLTPQDLADADLQIDFESLYVNAESGKVLRTEWLSEAECQRAAETILHLFVEVTRVIEQQDFEGWLKNRLLGGS
Ga0247798_10617721	3300023260	Soil	MGLSSAWEKLYRAVVTLATADAPLKERLASAFHSHLLGLTPQDLADADLQIDFESLYVNAESGKVLRTEWLSEAECQRAAETILHLFVEVTRVIE
Ga0209640_108771431	3300025324	Soil	MPDTDLVEVLYRLDVGDMIPPELYRAVATLATADAPLKERLASAFHSQLLGVTAQDLAEVGLQIDFESLYVNAESGKVLRTEWLSEEECQRAARTILHLFVGVTRTIEQEDFEGWLKNRLLGGS
Ga0207704_114213541	3300025938	Miscanthus Rhizosphere	VAGASLARDSGATADARLKERLASAFHSHLLGLTPQDLADADLQIDFESLYVNAESGKVLRTEWLSEAECQRAAETILHLFVEVTRVIEQQDFEGWLKNRLLGGS
Ga0207674_106435623	3300026116	Corn Rhizosphere	MGLSTAWEKLYRAVATLATADAPLKDRLASAFHSHLLGLTPQDLADADLQIDFESLYVNAESGKVLRTEWLSEAECQRAAETILHLFVEVTRVIEQQDFEGWLKNRLLGGS
Ga0207675_1000610803	3300026118	Switchgrass Rhizosphere	MGLSSAWEKLYRAVVTLATADAPLKERLASAFHSHLLGLTPQDLADADLQIDFESLYVNAESGKVLRTEWLSEAECQRAAETILHLFVEVTRVIEQQDFEGWLKNRLLGGS
Ga0256813_10173811	3300026348	Sediment	MTTGEKLYGAVATLATADAPLKERLSSAFRSHLLGLTPQEFAEVGLQTDFESLYVNAESGKVLRTEWLSEEECQRASQTILHLFVEVTRTIEQEDFEGWLKNRLLGGS
Ga0256815_10132391	3300026463	Sediment	MGLRTTWEKLYGAVATLATADAPLKERLVSAFRSHLLGLTPQEFAEVGLQTDFESLYVNAESGKVLRTEWLSEEECQRASQTILHLFVEVTRIVEQEDFEGWLKNRLLGGS
Ga0256867_100138565	3300026535	Soil	MGLRTTWEKLYRAVVTLATADAPLKERVAAAFHSHLLGLAPRDFAEGGLQVDFESLYVDAETGKVLRTEWLSEEECRRAAETILHLFVEVTRSIEQEDFEGWLKNRLLGGS
Ga0209077_11926342	3300027675	Freshwater Sediment	MGLKTAWEQLYRAVVTLATADAPLKERLASAFHSHLLDLTAKDFADAGLQIDFESLYVNAETGKVLRTEWLSEAECQQAAQTILHLFVEVTRTIEQEDFEGWLKNRLLGGS
Ga0209286_12073712	3300027713	Freshwater Sediment	MGLRTTWEKLYRAVVTLATADAPLKERLASAMHSHLLGLTPKDFADGGLQVDFESLYVNAETGKVLRTEWLSEEECQRAARTILHLFVEVTRTVEQEDFEGWLKNRLLGGS
Ga0209287_101783122	3300027792	Freshwater Sediment	MGLRATWEKLYRAVATLATADAPLKERLASAFHSHLLGLTAQEFADGGLQTDFESLYVNAESGKALRTEWLSEEECQRAAETILHLFVEVTRTIEQEDFEGWLKNRLLGGS
Ga0256868_101148222	3300027811	Soil	MGLRTTWEKLYRAVVTLAMADAPLKERLASAFHSHLLGLTPKDFADGGLQIDFESLYVNAETGKVLRTEWLSEEECQRAARTILHLFVEVTRTIEQEDFEGWLKNRLLGGS
Ga0209798_100194202	3300027843	Wetland Sediment	MGSRTTWEKLYGAVVMLATADAPLKERLGSAFHAHLLGLTPQDFADGGLQTDFESLYVNAETGNVLRTEWLSEAECRRAAETILHLFIEVTRTIEQEDFEGWLKNRLLGGS
Ga0209397_103043552	3300027871	Wetland	VGIRTTWEKLYHAVGTLATADAPLKERLASAFHLHLLGLTPQDFADGGLQTDFESLYVNAETGKVLRTEWLSDEECQRAAETILHLFIEVTRTIEQEDFEGWLKNRLLGGS
Ga0209293_102657162	3300027877	Wetland	MGLRTTWEKLYRAVATLATADAPLKERLASAFHSHLLGLTPQDFADGGLQTDFESLYVNAETGKVLRTEWLSEEECQRAAETILHLFVEVTRTIEQEDFEGWLKNRLLGGS
Ga0209293_105770721	3300027877	Wetland	MDSRTTWEKLYRAVATLATADAPLKERLASAFRSHLLGLTPQEFADVGLQTDFESLYVNAESGKVLRTEWLSEEECQHASQTILHLFVEVTRIIEQEDFEGWLKNRLLGGS
Ga0209253_102624092	3300027900	Freshwater Lake Sediment	MGLRTTWEKLYRAVATLATADAPLKERLASAFHSHLRGLTPQDFADGGLQTDFESLYVNAESGKVLRTEWLSEEECQRAAQTILHLFVEVTRTIEQEDFEGWLKNRLLGGS
Ga0209253_104493672	3300027900	Freshwater Lake Sediment	MGSRITWEKLYGAVATLATADAPLKERLASAFHSDLRGLTPQDFADGGLQTDFESLYVSAESGKVLRTEWLSEEECQRAAQTILHLFVEVTRTIEQEDFEGWLKNRLLGGS
Ga0209048_105233552	3300027902	Freshwater Lake Sediment	MGSRDTWEKLYLAVRTLTEADAPLKERLGSAFHANLLDLTPQDFAEEDLQHDFESLYVDADSGKVLRTEWLSDEECAQAAETILHLFIEVTRKIEQQDFEGWLKNRLLGGA
Ga0247822_106683542	3300028592	Soil	MGLSTTWEGLYRAVVTLATADAPLKERLTSALHSHLADLKSQDFEDRGLQIDFESLYVSAESGKVLRTEWLSEKECQRAAQTILHLFVEVTRIIEQEDFEGWLKNRLLGGA
Ga0299915_101123203	3300030613	Soil	MGLSATWEKLYRAVATLATADAPLRERLASAFHSHLLGLTPQDFDDGGLQIDFESLYVNAESGKVLRTEWLSDEECQRAAQTILHLFVEVTRTVEQEDFEGWLKNRLLGGS
Ga0316190_111280601	3300032259	Worm Burrow	MGLRNTWEKLYLAVHTLALTDAPLKERLSSAFHSSLLALTPRDFAEGDLQHDFESLYVDAESGRVLRTEWLSEEECRHAAETILHLFIEVTRTIEQEDFEGWLKNRLLGGA
Ga0316192_105743841	3300032260	Worm Burrow	MGLRNTWEKLYLAVHTLALTDAPLKERLGSAFHSSLLDLTPRDFAEGDLQHDFESLYVDAESGRVLRTEWLSEEECRHAAETILHLFIEVTRTIEQEDFEGWLKNRLLGGA
Ga0316192_105774841	3300032260	Worm Burrow	MGLRNTWEKLYVAVQTLALTDAPLKERLGSAFHSSLLALTPRDFAEGDLQHDFESLYVDAESGRVLRTEWLSEEECRHAAEMILHLFIEV
Ga0316195_102790301	3300032263	Sediment	MGLRNTWEKLYVAVQTLALTDAPLKERLGSAFHSSLLALTPRDFAEGDLQHDFESLYVDAESGRVLRTEWLSEEECRHAAEMILHLFIEVTRTIEQEDFEGWLKNRLLGGA
Ga0335085_105760522	3300032770	Soil	MYRIGVDTADLHRRQVRGRPSRTEDAMGVRTTWEKLYRAVVTLATADAPLKERLASAFHSHLLGLTPPDFADGGLQTDFESLYVNAETGKVLRTEWLSEDECQRAAETILHLFIEVTRTIEQEDFEGWLKNRLLGGS
Ga0335084_101417972	3300033004	Soil	MGVRTTWEKLYRAVVTLATADAPLKERLASAFHSHLLGLTPPDFADGGLQTDFESLYVNAETGKVLRTEWLSEDECQRAAETILHLFIEVTRTIEQEDFEGWLKNRLLGGS
Ga0335084_103200561	3300033004	Soil	MGLSTAWEKLYRAVATLATADAPLKERLASAFHSHLLGLTPQDLADGNLQVDFESLYVNAESGKVLRTEWLSEAECQQAAQTILHLFVEVTRIIEQQDFEGWLNNRLLGGS
Ga0335084_110023932	3300033004	Soil	MGVRATWERLYHAVVILATADAPLKERLASAFHSDLLGLTPADFADGGLQTDFESLYVNAETGKVLRTEWLSEGECQRAAETILHLFIEVTRTIEQEDFEGWLKNRLLGGP
Ga0335084_111584232	3300033004	Soil	LSATWEKLYRAVAILATADAPLKERLASAFHSHLLGLTPQDFADGGLRIDFESLYVNAETGKVLRTEWLSEEECQQAAQTILHLFVEVTRSIEQEDFEGWLKNRLLGG
Ga0335084_113398772	3300033004	Soil	MGLGTTWDQLYRAVVTLATADAPLKERLASAFHSHLLDLTPTDFADAGLQIDFESLYVNAETGKALRTEWLSEEECQQAAQTILHLFVEVTRTIEQEDFEGWLKNRLLGGS
Ga0316605_103750562	3300033408	Soil	VGLNATWEKLYRAVAILATADAPLKERLTSAFHSQLLDLRTRDFEDHDLQVDFESLYVNAESGRVLRTEWLSDEECQRAAQTILHLFVEITRTVEQEDFEGWLKNRLLGGA
Ga0316605_106691142	3300033408	Soil	MGIRTTWEKLYHAVGTLATADEPLKERLASAFHLHLVGLTPQDFADGGLQTDFESLYVNAETGKVLRTEWLSDEECQRAAETILHLFIEVTRTIEQEDFEGWLKNRLLGGS
Ga0316605_106895511	3300033408	Soil	MGLRTTWEKLYRAVVTLATADAPLKERLASAFHLHLLGLTPQDFADGGLQTDFESLYVSAETGRVLRTEWLSEDECQQAAETILHLFIEVTRTIEQEDFEGWLKNRLLGGS
Ga0316605_112594202	3300033408	Soil	WLPGAGPPRAPPDAPLKERLASAFHSHLVGLTPQDFADGELQTDFESLYVSAETGKVLRTEWLSEEECQRAAETILHLFVEVTRTIEQEDFEGWLKNRLLGGS
Ga0316605_118454902	3300033408	Soil	MGSRTTWEKLYGAVVTLATADAPLKERLGSAFHDRLLGLTPQDFADGGLQTDFESLYVNAETGKVLRTEWLSDEECRRAAETILHLFIEVTRTIEQEDFEGWLKNRLLGGS
Ga0316603_106005942	3300033413	Soil	VGIRTTWEKLYHAVGTLATADAPLKERLASAFHLHLLGLTPQDFADGGLQTDFESLYVNAETGKVLRTEWLSEEECRRAAQTILHLFIEITRTIEQEDFEGWLKNRLLGGS
Ga0316619_100600902	3300033414	Soil	MSLRTTWEKLYHAVATLATADTPLKERLASAFHSHLVDLTPQDFADGGLQSDFESLYVNAETGKVLRTEWLSEGECQRAAQTILHLFIEVTRTIEQEDFEGWLKNRLLGGS
Ga0316619_102034402	3300033414	Soil	MGIRTTWEKLYHAVGTLATADAPLKERLASAFHLHLLGLTPQDFADGGLQTDFESLYVNAETGKVLRTEWLSEEECRRAAQTILHLFIEITRTIEQEDFEGWLKNRLLGGS
Ga0316619_102064103	3300033414	Soil	MGIRTTWERLYHAVGTLTTADAPLKERLGSAFHLHLLGLTPQDFADEGLQTDFESLYVNAETGKVLRTDWLSEEECRRAAETILHLFIEVTRTIEQEDFEGWLKNRLLGGS
Ga0316619_102386153	3300033414	Soil	MGSRTTWEKLYGAVVALATADAPLKERLASAFHLHLLGLTPQDFADGGLQTDFESLYVSAETGRVLRTEWLSEDECQQAAETILHLFIEVTRTIEQEDFEGWL
Ga0316619_108859022	3300033414	Soil	MGLRTTWEKLYRAVATLATADAPLKERLASAFHSHLRGLTPQDFADGGLQTDFESLYVNAESGKVLRTEWLSEEECQRAAETILHLFVEV
Ga0316622_1001370782	3300033416	Soil	MGIRTTWEKLYRAVATMTTADAPLKERLASAFHLHLLGLTPQDFADGGLQTDFESLYVNAKTGKVLRTEWLSEEECRRAAETILHLFIEVTRTIEQEDFEGWLKNRLLGGS
Ga0316622_1002384522	3300033416	Soil	MRLSATWEKLYLAVVTLVTADAPLKERLASAFHSQLLALRPQDLAEVGLRIDFESLYVNAETGKVLRTEWLSEEECQRAAQTILHLFVEVTRTIEQEDFEGWLKNRLLGGS
Ga0316622_1002903091	3300033416	Soil	MGLRITWEKLYRAVATLATADAPLKERLASAFHSHLRGLTPQDFADGGLQTDFESLYVNAESGKVLRTEWLSEEECQRAAETILHLFVEVTRTIEQEDFEGWLKNRLLGGS
Ga0316622_1011275342	3300033416	Soil	MDSRTTWEKLYRAVATLATADAPLKERLASAFRSHLLGLTPQEFADVGLQTDFESLYVNAETGKVLRTEWLSEEECQRAAETILHLFIEVTRTIEQEDFEGWLKNRLLGGS
Ga0316622_1011638952	3300033416	Soil	MGSRGTWERLYRAVATLATADTPLKERLASAFHAHLLDLTPQDFADEGLQSDFESLYVNAETGKVLRTEWLSEGECQRAAQTILHLFIEVTRTIEQEDFEGWLKNRLLGGS
Ga0316622_1012666241	3300033416	Soil	MGLRTSWEKLYGAVATLATADAPLKERLSSAFRSHLLGLTPQEFAEVGLQTDFESLYVNAESGKVLRTEWLSEEECQHAAQTILHLFVEVTRTIEQEDFEGWLKNRLLGGS
Ga0316622_1017943351	3300033416	Soil	MGLRTTWEKLYRAVATLATADAPLKERLASAFHSHLRGLTPQDFADGGLQTDFESLYVNAESGKVLRTEWLSEEECQRAAQTILHLFVEVTRTIE
Ga0316625_1010779522	3300033418	Soil	MGSRTTWEKLYGAVATLVTADTPLKERLASAFHSHLLGLTPQDFADGGLQTDFESLYMNAETGKVLRTEWLSEEECHRAAETILHLFVEVTRTVEQEDFEGWLKNRLLGGS
Ga0316625_1018575202	3300033418	Soil	MSLWNTWERLYLATRTLALTDAPLKERLGSAFHSHLVGLTPEDFADAGLKLDFESLYVDADSGKVLRTEWLSDEECQQAAETILHLLIEVTRAMEQEDFEGWLKNRLLGGA
Ga0316601_1015384951	3300033419	Soil	MGTRTTWEKLYRAVAALATADAPLKERLASAFHSHLLGLTPQDFADGGLQTDFESLYVNAETGKVLRTEWLSEEECQRAAETILHLFVEVTRTIEQEDFEGWLKNRLLGGS
Ga0326726_101486671	3300033433	Peat Soil	MGSRTTWEKLYGAVATLATADAPLKERLGAAFHSHLLGLTPQEFADGGLQTDFESLYVNAKDGKALRTEWLSEGECQRAAETILHLFVEVTRTIEQEDFEGWLKNRLLGGS
Ga0326726_105903933	3300033433	Peat Soil	DAPLKERLASAFHSHLRGVRPQDFEDAGLQIDFESLYVNAESGKVLKTEWLSEDECYRAAQTILHLFVEVTRIIEQEDFEGWLKNRLLGGA
Ga0316613_112972662	3300033434	Soil	KLYLAVVTLVTADAPLKERLASAFHSQLLALRPQDLAEVGLRIDFESLYVNAETGKVLRTEWLSEEECQRAAQTILHLFVEVTRTIEQEDFEGWLKNRLLGGS
Ga0316620_111604372	3300033480	Soil	LYRAVATLVTADAPLKEPLASAFHSHLRGLTPQDFADAGLQTDFESLYVNAESGKVLRTEWLSEEECRRAAETILHLFVEVTRTIEQEDFEGWLKNRLLGGS
Ga0316620_113811542	3300033480	Soil	MSLRQTWEKLYRANHTLVVADVPLKERLGSAFHSHLAGLTPADFADGGLQLDFESLYVDADSGKVLRTDWLSEGECRQAAETILHLLIEVTRTIEQEDFEGWLKNRLLGGP
Ga0316600_112151821	3300033481	Soil	MGIRTTWEKLYHAVGTLATADEPLKERLASAFHLHLVGLTPQDFADGGLQTDFESLYVNAETGKVLRTEWLSEEECRRAAETILHLFIEVTRTIEQEDFEGWLKNRLLGGS
Ga0316627_1017480401	3300033482	Soil	MGLRTTWEKLYRAVATLATADAPLKERLASAFHSHLRGLTPQDFADGGLQTDFESLYVNAESGKVLRTEWLSEEECQRAAETILHLFVEVTRTIEQEDFEGWLKNRLLGGS
Ga0316626_114580841	3300033485	Soil	MGLRTTWEKLYRAVATLATADAPLKERLASAFHSHLRGLTPQDFADGGLQTDFESLYVNAESGKVLRTEWLSEGECQRAAQTILHLFIEVTRTIEQEDFEGWLKNRLLGGS
Ga0316626_117038132	3300033485	Soil	MGLRPTWEKLYRAVVTLATADAPLKERLASAMHSHLLDLTPKDFADGGLQIDFESLYVNEETGKVLRTEWLSEVECQQAAQTILHLFVEVTRTIEQEDFEGWLKNRLLGGS
Ga0316626_118766592	3300033485	Soil	MDLRTTWEKLYRAVATLATADAPLKERLASAFRSHLLGLTPQEFADVGLQTDFESLYVNAETGKVLRTEWLSEEECQRAAETILHLFIEVTRTIEQEDFEGWLKNRLLGGS
Ga0316624_106525113	3300033486	Soil	MGLSTTWEKLYYAVATLATADAPLKERLASAFHSHLLGLTPRDFADGGLQIDFESLYVDADSGKVLRTRWLSEEECQRAAETILHLFVEVTRRIEQEDFEGWLKNRLL
Ga0316624_110042921	3300033486	Soil	MGLRTTWEKLYGAVVTLATADAPLKERLASGFHSHLLDLTPKDFADAGLQIDFESLYVDAETGKVLRTEWLSEEECQQAAQTILHLFVEVTRTIEQEDFEGWLKNRLLGGS
Ga0316624_114446591	3300033486	Soil	VGLRTTWEKLYRAVVTLATADAPLKERLASAFHSHLLDLTPKDFADAGLQIDFESLYVNAETGKVLRTEWLSEGECQRAAQTILHLFVEVTRTIEQEDFEGWLKNRLLGGS
Ga0316630_110948341	3300033487	Soil	MGIRTTWERLYRAVDTLTTADAPLKERLGSAFHLHLLGLTPQDFADEGLQTDFESLYVNAETGKVLRTDWLSEEECRRAAETILHLFIEVTRTIEQEDFEGWLKNRLLGGS
Ga0316630_117043971	3300033487	Soil	TADAPLKERLASAFHSHLRGLTPQDFADGGLQTDFESLYVNAESGKVLRTEWLSEEECQRAAETILHLFVEVTRTIEQEDFEGWLKNRLLGGS
Ga0299912_111287101	3300033489	Soil	MGLRTTWEKLYRAVVTLATADAPLKERLASAFHSHLLGLTPKDFADGGLQIDFESLYVNAETGKVLRTEWLSEEECQRAARTILHLFVEVTRTIEQEDFEGWLKNRLLGGS
Ga0316628_1043914211	3300033513	Soil	MGLSATWERLYRAVATLATADAPLKERLASAFHSHLLGLTPQDFDDGGLQIDFESLYVNAESGKVLRTEWLSDEECQRAAQTILHLFVEVTRMIEQEDFEGWLKNRLLGGS
Ga0316616_1002384922	3300033521	Soil	MGLSATWEKLYRAVAILATADAPLKDRLTSAFHSELLDLRTQDFEDRGLQIDFESLYMNAQSGKVLRTEWLSEEECRRAARTILHLFVEITRTVEQEDFEGWLNNRLLGGS
Ga0373893_057632_43_378	3300034056	Sediment Slurry	MGLRTTWERLYRAVATLATADAPLKERLASAFHSHLLGLTPKDFADGGLQIDFESLYVNAETGKVLRTEWLSEEECRRAAETILHLFIEVTRTIEQEDFEGWLKNRLLGGS
Ga0326723_0166939_232_567	3300034090	Peat Soil	MGSRRTWEKLYRAVHTLTVADAPLKERLGSAFRSNLLELTPQDFAEADLQHDFESLYVDADSGRVLRTEWLSEQECTHAADTILHLFIEVTRKIEQEDFEGWLKNRLLGGT
Ga0373902_091207_113_448	3300034099	Sediment Slurry	MGLRTTWEKLYRAVATLATADAPLKERLASAFRSHLLGLTPQEFADVGLQTDFESLYVNAETGKVLRTEWLSEEECQRAAETILHLFIEVTRTIEQEDFEGWLKNRLLGGS
Ga0373917_0062387_3_332	3300034692	Sediment Slurry	LRTTWEQLYRAVVTLATADAPLKERLASAFHSHLLDLTLKDFADAGLQIDFESLYVNAETGKVLRTEWLSEEECQQAAQTILHLFVEVTRTIEQEDFEGWLKNRLLGGS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F061948

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences