Metagenome Family F061329

Basic Information
Family ID	F061329
Family Type	Metagenome
Number of Sequences	132
Average Sequence Length	52 residues
Representative Sequence	VGTRALKLMVILLCLINAAMWLFYTESALMATLWGAVAVGFLVWIIDDMR
Number of Associated Samples	122
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	35.20 %
% of genes near scaffold ends (potentially truncated)	28.79 %
% of genes from short scaffolds (< 2000 bps)	73.48 %
Associated GOLD sequencing projects	109
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.76

Most Common Taxonomy
Group	Bacteria (88.636 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil (9.091 % of family members)
Environment Ontology (ENVO)	Unclassified (25.758 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (39.394 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 58.97% β-sheet: 0.00% Coil/Unstructured: 41.03%
Feature Viewer

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SCOP family	SCOP domain	Representative PDB	TM-score
a.266.1.0: automated matches	d2nw8a_	2nw8	0.88165
a.24.25.1: TrmE connector domain	d1xzpa1	1xzp	0.87067
a.29.6.1: Plant invertase/pectin methylesterase inhibitor	d1x91a_	1x91	0.86518
a.8.11.1: AF1782-like	d2pmra1	2pmr	0.85996
a.24.19.0: automated matches	d5mawe_	5maw	0.85771

Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF13649	Methyltransf_25	11.36
PF13847	Methyltransf_31	7.58
PF00563	EAL	7.58
PF10604	Polyketide_cyc2	5.30
PF01844	HNH	3.03
PF03401	TctC	2.27
PF13519	VWA_2	2.27
PF07584	BatA	2.27
PF13365	Trypsin_2	1.52
PF01985	CRS1_YhbY	1.52
PF00990	GGDEF	1.52
PF00583	Acetyltransf_1	1.52
PF13458	Peripla_BP_6	0.76
PF13714	PEP_mutase	0.76
PF02787	CPSase_L_D3	0.76
PF00988	CPSase_sm_chain	0.76
PF01301	Glyco_hydro_35	0.76
PF12681	Glyoxalase_2	0.76
PF11026	DUF2721	0.76
PF16477	DUF5054	0.76
PF12973	Cupin_7	0.76
PF11695	DUF3291	0.76

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	7.58
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	7.58
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	7.58
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	7.58
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	2.27
COG0505	Carbamoylphosphate synthase small subunit	Amino acid transport and metabolism [E]	1.52
COG1534	RNA-binding protein YhbY	Translation, ribosomal structure and biogenesis [J]	1.52
COG1874	Beta-galactosidase GanA	Carbohydrate transport and metabolism [G]	0.76

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.64 %
Unclassified	root	N/A	11.36 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	88.64 %
Unclassified	root	N/A	11.36 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	88.64 %
Unclassified	root	N/A	11.36 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	80.30 %
Unclassified	root	N/A	11.36 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	45.45 %
Unclassified	root	N/A	11.36 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.27 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.76 %

Name	Rank	Taxonomy	Distribution
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	26.52 %
Unclassified	root	N/A	11.36 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	4.55 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.27 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	26.52 %
Unclassified	root	N/A	11.36 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.27 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	1.52 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.76 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	26.52 %
Unclassified	root	N/A	11.36 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.27 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	0.76 %
Noviherbaspirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Noviherbaspirillum	0.76 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	26.52 %
Unclassified	root	N/A	11.36 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.27 %
Noviherbaspirillum massiliense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Noviherbaspirillum → Noviherbaspirillum massiliense	0.76 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	0.76 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352024\|deeps_contig32862.20987	All Organisms → cellular organisms → Bacteria → Proteobacteria	3462	Open in IMG/M
3300001213\|JGIcombinedJ13530_102610192	Not Available	754	Open in IMG/M
3300001661\|JGI12053J15887_10585824	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	531	Open in IMG/M
3300004091\|Ga0062387_100565083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	808	Open in IMG/M
3300004091\|Ga0062387_100922119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	663	Open in IMG/M
3300004092\|Ga0062389_101554135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	844	Open in IMG/M
3300004092\|Ga0062389_102525546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	682	Open in IMG/M
3300004152\|Ga0062386_100032595	All Organisms → cellular organisms → Bacteria → Proteobacteria	3874	Open in IMG/M
3300004152\|Ga0062386_100279491	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1328	Open in IMG/M
3300004156\|Ga0062589_101504759	All Organisms → cellular organisms → Bacteria → Proteobacteria	662	Open in IMG/M
3300004479\|Ga0062595_100818943	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	770	Open in IMG/M
3300004635\|Ga0062388_100224475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1506	Open in IMG/M
3300004635\|Ga0062388_100909212	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
3300004635\|Ga0062388_101850282	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	621	Open in IMG/M
3300004643\|Ga0062591_100701524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	915	Open in IMG/M
3300005165\|Ga0066869_10143778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	511	Open in IMG/M
3300005290\|Ga0065712_10271527	All Organisms → cellular organisms → Bacteria → Proteobacteria	905	Open in IMG/M
3300005334\|Ga0068869_100130192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1933	Open in IMG/M
3300005355\|Ga0070671_101750787	All Organisms → cellular organisms → Bacteria → Proteobacteria	552	Open in IMG/M
3300005356\|Ga0070674_100001678	All Organisms → cellular organisms → Bacteria → Proteobacteria	11972	Open in IMG/M
3300005364\|Ga0070673_100093313	All Organisms → cellular organisms → Bacteria → Proteobacteria	2464	Open in IMG/M
3300005367\|Ga0070667_101324652	All Organisms → cellular organisms → Bacteria → Proteobacteria	675	Open in IMG/M
3300005434\|Ga0070709_10145270	All Organisms → cellular organisms → Bacteria → Proteobacteria	1634	Open in IMG/M
3300005434\|Ga0070709_10337976	All Organisms → cellular organisms → Bacteria → Proteobacteria	1109	Open in IMG/M
3300005437\|Ga0070710_10053207	All Organisms → cellular organisms → Bacteria → Proteobacteria	2279	Open in IMG/M
3300005564\|Ga0070664_101612436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	615	Open in IMG/M
3300005602\|Ga0070762_10880699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	609	Open in IMG/M
3300005843\|Ga0068860_100207493	All Organisms → cellular organisms → Bacteria → Proteobacteria	1900	Open in IMG/M
3300005940\|Ga0073913_10096183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	512	Open in IMG/M
3300005993\|Ga0080027_10158059	All Organisms → cellular organisms → Bacteria	872	Open in IMG/M
3300006163\|Ga0070715_10055790	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1716	Open in IMG/M
3300006224\|Ga0079037_101261695	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	735	Open in IMG/M
3300006354\|Ga0075021_10637389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	682	Open in IMG/M
3300006358\|Ga0068871_100727443	All Organisms → cellular organisms → Bacteria → Proteobacteria	911	Open in IMG/M
3300006796\|Ga0066665_11122263	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	599	Open in IMG/M
3300006871\|Ga0075434_100188177	All Organisms → cellular organisms → Bacteria → Proteobacteria	2084	Open in IMG/M
3300006904\|Ga0075424_101950417	All Organisms → cellular organisms → Bacteria → Proteobacteria	620	Open in IMG/M
3300006954\|Ga0079219_10230466	All Organisms → cellular organisms → Bacteria → Proteobacteria	1081	Open in IMG/M
3300007076\|Ga0075435_100336165	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	1294	Open in IMG/M
3300009009\|Ga0105105_10355411	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	806	Open in IMG/M
3300009078\|Ga0105106_10038563	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3539	Open in IMG/M
3300009098\|Ga0105245_10053632	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3619	Open in IMG/M
3300009101\|Ga0105247_10020588	All Organisms → cellular organisms → Bacteria → Proteobacteria	3965	Open in IMG/M
3300009131\|Ga0115027_10034096	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2440	Open in IMG/M
3300009148\|Ga0105243_10363143	All Organisms → cellular organisms → Bacteria → Proteobacteria	1333	Open in IMG/M
3300009174\|Ga0105241_10841353	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	848	Open in IMG/M
3300009553\|Ga0105249_12268976	All Organisms → cellular organisms → Bacteria → Proteobacteria	616	Open in IMG/M
3300010339\|Ga0074046_10691915	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	599	Open in IMG/M
3300010341\|Ga0074045_10002099	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	18709	Open in IMG/M
3300010341\|Ga0074045_10232563	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1224	Open in IMG/M
3300010343\|Ga0074044_10054507	All Organisms → cellular organisms → Bacteria → Proteobacteria	2737	Open in IMG/M
3300010373\|Ga0134128_10379712	Not Available	1578	Open in IMG/M
3300010379\|Ga0136449_100230948	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3465	Open in IMG/M
3300010401\|Ga0134121_10043672	All Organisms → cellular organisms → Bacteria → Proteobacteria	3667	Open in IMG/M
3300011998\|Ga0120114_1007335	All Organisms → cellular organisms → Bacteria → Proteobacteria	2635	Open in IMG/M
3300012019\|Ga0120139_1007943	All Organisms → cellular organisms → Bacteria → Proteobacteria	2494	Open in IMG/M
3300012202\|Ga0137363_10951444	All Organisms → cellular organisms → Bacteria	729	Open in IMG/M
3300012203\|Ga0137399_10540893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	978	Open in IMG/M
3300012205\|Ga0137362_10896008	All Organisms → cellular organisms → Bacteria → Proteobacteria	758	Open in IMG/M
3300012207\|Ga0137381_10361608	All Organisms → cellular organisms → Bacteria → Proteobacteria	1265	Open in IMG/M
3300012209\|Ga0137379_11214851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	660	Open in IMG/M
3300012349\|Ga0137387_10394819	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1003	Open in IMG/M
3300012506\|Ga0157324_1048759	All Organisms → cellular organisms → Bacteria → Proteobacteria	544	Open in IMG/M
3300012582\|Ga0137358_10955280	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	558	Open in IMG/M
3300012957\|Ga0164303_10655394	All Organisms → cellular organisms → Bacteria → Proteobacteria	700	Open in IMG/M
3300012961\|Ga0164302_10738353	All Organisms → cellular organisms → Bacteria → Proteobacteria	735	Open in IMG/M
3300012989\|Ga0164305_10804281	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	780	Open in IMG/M
3300013100\|Ga0157373_10203479	All Organisms → cellular organisms → Bacteria → Proteobacteria	1396	Open in IMG/M
3300013104\|Ga0157370_11004310	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	755	Open in IMG/M
3300013232\|Ga0170573_11078591	Not Available	747	Open in IMG/M
3300013503\|Ga0120127_10045800	All Organisms → cellular organisms → Bacteria	863	Open in IMG/M
3300013503\|Ga0120127_10097805	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300013770\|Ga0120123_1005423	All Organisms → cellular organisms → Bacteria → Proteobacteria	2385	Open in IMG/M
3300014052\|Ga0120109_1067242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	816	Open in IMG/M
3300014261\|Ga0075360_1099518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	572	Open in IMG/M
3300015080\|Ga0167639_1000746	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Noviherbaspirillum → Noviherbaspirillum massiliense	5100	Open in IMG/M
3300015371\|Ga0132258_11804170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1541	Open in IMG/M
3300017927\|Ga0187824_10022112	All Organisms → cellular organisms → Bacteria → Proteobacteria	1882	Open in IMG/M
3300017936\|Ga0187821_10077313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1211	Open in IMG/M
3300020059\|Ga0193745_1027059	All Organisms → cellular organisms → Bacteria → Proteobacteria	1259	Open in IMG/M
3300021432\|Ga0210384_10031327	All Organisms → cellular organisms → Bacteria → Proteobacteria	4969	Open in IMG/M
3300021444\|Ga0213878_10289220	All Organisms → cellular organisms → Bacteria → Proteobacteria	702	Open in IMG/M
3300022756\|Ga0222622_10495427	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	873	Open in IMG/M
3300025464\|Ga0208076_1019110	All Organisms → cellular organisms → Bacteria	1180	Open in IMG/M
3300025878\|Ga0209584_10179036	Not Available	805	Open in IMG/M
3300025898\|Ga0207692_10947618	All Organisms → cellular organisms → Bacteria → Proteobacteria	567	Open in IMG/M
3300025899\|Ga0207642_10003499	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4961	Open in IMG/M
3300025911\|Ga0207654_11055371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	591	Open in IMG/M
3300025927\|Ga0207687_10051328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2875	Open in IMG/M
3300025935\|Ga0207709_10949326	All Organisms → cellular organisms → Bacteria → Proteobacteria	701	Open in IMG/M
3300026281\|Ga0209863_10072427	All Organisms → cellular organisms → Bacteria → Proteobacteria	1017	Open in IMG/M
3300026291\|Ga0209890_10005244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	5512	Open in IMG/M
3300027715\|Ga0208665_10286927	Not Available	516	Open in IMG/M
3300027723\|Ga0209703_1302340	Not Available	567	Open in IMG/M
3300027737\|Ga0209038_10118129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	803	Open in IMG/M
3300027762\|Ga0209288_10250016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	585	Open in IMG/M
3300027775\|Ga0209177_10098209	All Organisms → cellular organisms → Bacteria → Proteobacteria	924	Open in IMG/M
3300027812\|Ga0209656_10127445	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1303	Open in IMG/M
3300027829\|Ga0209773_10145920	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	985	Open in IMG/M
3300027890\|Ga0209496_10623261	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	585	Open in IMG/M
3300027894\|Ga0209068_10150342	All Organisms → cellular organisms → Bacteria → Proteobacteria	1260	Open in IMG/M
3300027897\|Ga0209254_10059488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3303	Open in IMG/M
3300027899\|Ga0209668_10233732	All Organisms → cellular organisms → Bacteria	1158	Open in IMG/M
3300027900\|Ga0209253_10736196	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	708	Open in IMG/M
3300027902\|Ga0209048_10017286	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	6322	Open in IMG/M
3300028679\|Ga0302169_10148698	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	588	Open in IMG/M
3300028679\|Ga0302169_10150133	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300029951\|Ga0311371_12201136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	575	Open in IMG/M
3300029990\|Ga0311336_10032902	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	3995	Open in IMG/M
3300030000\|Ga0311337_10027605	All Organisms → cellular organisms → Bacteria → Proteobacteria	4396	Open in IMG/M
3300030048\|Ga0302273_1124921	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300030294\|Ga0311349_12217961	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300030520\|Ga0311372_11898123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	704	Open in IMG/M
3300031198\|Ga0307500_10137536	All Organisms → cellular organisms → Bacteria → Proteobacteria	688	Open in IMG/M
3300031720\|Ga0307469_11929778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	572	Open in IMG/M
3300031726\|Ga0302321_103270212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	528	Open in IMG/M
3300031753\|Ga0307477_11007915	Not Available	546	Open in IMG/M
3300032160\|Ga0311301_10146618	All Organisms → cellular organisms → Bacteria	4293	Open in IMG/M
3300032174\|Ga0307470_10595191	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	826	Open in IMG/M
3300032180\|Ga0307471_101849986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	754	Open in IMG/M
3300032256\|Ga0315271_10022469	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	4336	Open in IMG/M
3300032256\|Ga0315271_10509298	All Organisms → cellular organisms → Bacteria → Proteobacteria	1021	Open in IMG/M
3300033803\|Ga0314862_0074336	Not Available	762	Open in IMG/M
3300034074\|Ga0373894_020994	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	920	Open in IMG/M
3300034196\|Ga0370503_0202643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	706	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	78.03%
Host-Associated	Host-Associated	20.45%
Engineered	Engineered	1.52%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	52.27%
Aquatic	Environmental → Aquatic	25.76%
Plants	Host-Associated → Plants	20.45%
Wastewater	Engineered → Wastewater	0.76%
Bioremediation	Engineered → Bioremediation	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	44.70%
Freshwater	Environmental → Aquatic → Freshwater	22.73%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.64%
Peat	Environmental → Terrestrial → Peat	6.82%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.06%
Sediment	Environmental → Aquatic → Sediment	2.27%
Marine	Environmental → Aquatic → Marine	0.76%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.76%
Roots	Host-Associated → Plants → Roots	0.76%
Industrial Wastewater	Engineered → Wastewater → Industrial Wastewater	0.76%
Metal	Engineered → Bioremediation → Metal	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	30.30%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	12.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.85%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.33%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	6.82%
Sediment	Environmental → Aquatic → Freshwater → Sediment	5.30%
Loam	Environmental → Terrestrial → Soil → Loam	5.30%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.55%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.79%
Lentic	Environmental → Aquatic → Freshwater → Lentic	3.03%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.27%
Lake	Environmental → Aquatic → Freshwater → Lake	1.52%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.52%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.76%
Sand	Environmental → Terrestrial → Soil → Sand	0.76%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.76%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.76%
Mine Water	Engineered → Wastewater → Industrial Wastewater → Mine Water	0.76%
Unclassified	Engineered → Bioremediation → Metal → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.15%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.85%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	9.09%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	6.82%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	6.82%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.06%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	5.30%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.55%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.79%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.79%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	3.03%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.27%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.27%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.27%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.52%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.52%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.52%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.52%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.76%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.76%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.76%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.76%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.76%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Mine Water → Unclassified	0.76%
Unclassified	Engineered → Bioremediation → Metal → Unclassified → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	9.09%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.30%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	4.55%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	4.55%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	3.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.79%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	3.03%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.03%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	3.03%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.27%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	2.27%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.27%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.27%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.27%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	1.52%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	1.52%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	1.52%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.52%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.52%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.52%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.52%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.52%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	1.52%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.52%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.52%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.52%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.52%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.76%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.76%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.76%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.76%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.76%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.76%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.76%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.76%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.76%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.76%
Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Sand	0.76%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	0.76%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.76%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.76%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.76%
Sediment	Engineered → Wastewater → Industrial Wastewater → Mine Water → Unclassified → Sediment	0.76%
Sediment Slurry	Engineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352024	Bare-fallow DEEP SOIL	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300004780	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare1Fresh	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005940	Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T4_25-Nov-14	Environmental	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009009	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009131	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011998	Permafrost microbial communities from Nunavut, Canada - A30_35cm_6M	Environmental	Open in IMG/M
3300012019	Permafrost microbial communities from Nunavut, Canada - A7_5cm_12M	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012506	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.6.old.040610	Host-Associated	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013232	Sediment microbial communities from Acid Mine Drainage holding pond in Pittsburgh, PA, USA ? S1	Engineered	Open in IMG/M
3300013503	Permafrost microbial communities from Nunavut, Canada - A23_5cm_12M	Environmental	Open in IMG/M
3300013770	Permafrost microbial communities from Nunavut, Canada - A15_5cm_18M	Environmental	Open in IMG/M
3300014052	Permafrost microbial communities from Nunavut, Canada - A23_35cm_12M	Environmental	Open in IMG/M
3300014261	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_TuleC_D1	Environmental	Open in IMG/M
3300015080	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G6C, Proglacial plain, adjacent to northern proglacial tributary)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020059	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a2	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025464	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025878	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026281	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046 (SPAdes)	Environmental	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300027715	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWC (SPAdes)	Environmental	Open in IMG/M
3300027723	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027735	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare1Fresh (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027762	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027818	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027890	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027897	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI (SPAdes)	Environmental	Open in IMG/M
3300027899	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)	Environmental	Open in IMG/M
3300027900	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300028679	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N1_3	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029990	I_Fen_N2 coassembly	Environmental	Open in IMG/M
3300030000	I_Fen_N3 coassembly	Environmental	Open in IMG/M
3300030048	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N1_3	Environmental	Open in IMG/M
3300030294	II_Fen_E3 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032256	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_top	Environmental	Open in IMG/M
3300033803	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_0_10	Environmental	Open in IMG/M
3300034074	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A4A4.1	Engineered	Open in IMG/M
3300034196	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_02D_18	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deeps_03882680	2199352024	Soil	MVILLCCINAAMWLFYTESALMAILWGAVAVGFLVWIIDDMRRGVPR
JGIcombinedJ13530_1026101922	3300001213	Wetland	MDFSARVLKLMVILLSTINAAMWLLYTESPVMASIWMGTAIAFLFWILDDMRR*
JGI12053J15887_105858242	3300001661	Forest Soil	MVILLCLINAAMWLFYTESALMATLWGAVAVGFFVWIIDDMRRGVPR*
Ga0062387_1005650832	3300004091	Bog Forest Soil	MDTAVGNRLLKLTVILLCMVNCLMWEVYTESTMMAIVWAGIAVGFVFWIIDDMRR*
Ga0062387_1009221191	3300004091	Bog Forest Soil	MDSAVGTRLLKLMVILLCCVNCAMWELYAESTLMAIAWAGVAVGFVVWIVDDMRR*
Ga0062389_1015541352	3300004092	Bog Forest Soil	MPITSSLAPVGNRLLKLMVILLCCINALMWEYYTESTLMAIVWGGIALAFVFWIIDDMRR
Ga0062389_1025255462	3300004092	Bog Forest Soil	MDTAVGNRLLKLTVILLCMVNCLMWEVYTESTMMAIVWAGVAVGFVFWIIDDIRR*
Ga0062386_1000325951	3300004152	Bog Forest Soil	MNDAAGAVGNRLLKLTVILLCMVNCLMWEVYTESTMMAIVWAGIAIGFVIWIIDDMRR*
Ga0062386_1002794912	3300004152	Bog Forest Soil	MGAGTRLLKLLVILLCCINFAMWELYAESTIVALFWAGIALGFVYWIIDDMRR*
Ga0062589_1015047591	3300004156	Soil	VGNRALKLMVILLCCINSAMWLFYTESTLMAAIWGAVAVGFLVWIIDDMRRGVPR*
Ga0062595_1008189431	3300004479	Soil	VGTRALKLMVILLCLINAAMWLFYTESALMATLWGAVAVGFLVWIIDDMRRGVPR*
Ga0062388_1002244751	3300004635	Bog Forest Soil	MDSAVGTRLLKLMVILLCCVNCAMWELYAESTLMAILWGGIAVGFVAWIVDDMRR*
Ga0062388_1009092123	3300004635	Bog Forest Soil	MDTGVGNRLLKLTVILLCMVNCLMWEVYTESTMMAIVWAGIAVGFVFWIIDDMRR*
Ga0062388_1018502821	3300004635	Bog Forest Soil	MDTVVGTRLLKLMVILLCCVNCAMWELYTESTLMAIVWAGVAVGFAVWIVDDMRR*
Ga0062591_1007015241	3300004643	Soil	MVILLCCINSAMWLFYTESTLMAAIWGAVAVGFLVWIIDDMRRGVPR*
Ga0062378_100330013	3300004780	Wetland Sediment	MGNRALKLMVILLCTINAVMWQMYTQAPMMAALWAATAIAFAFWIADDMRR*
Ga0066869_101437781	3300005165	Soil	MATSPAYSAIGNRLLKLMVILLCSINALMWEYYTESRIMALMWLGIAVAFVIWIIDDMRR
Ga0065712_102715272	3300005290	Miscanthus Rhizosphere	PVGTRALKLMVILLCLINAAMWLFYTESALMATLWGAVAVGFLVWIIDDMRRGVPR*
Ga0068869_1001301921	3300005334	Miscanthus Rhizosphere	VGTRALKLMVILLCLINAAMWLFYTESALMAMLWGAVAVGFLVWIIDDMRRGVPR*
Ga0068868_1003906871	3300005338	Miscanthus Rhizosphere	VGTRALKLMVILLCLINAAMWLFYTESALMAMLWGAVAVGF
Ga0070671_1017507871	3300005355	Switchgrass Rhizosphere	ILLCCINSAMWLFYTESTLMAAIWGAVAVGFLVWIIDDMRRGVPR*
Ga0070674_1000016789	3300005356	Miscanthus Rhizosphere	VGTRALKLMVILLCLINAAMWLFYTESALMAMLWGAVAVGFLVWIIDDMRRGAPR*
Ga0070673_1000933131	3300005364	Switchgrass Rhizosphere	LPVGTRALKLMVILLCLINAAMWLFYTESALMATLWGAVAVGFLVWIIDDMRRGVPR*
Ga0070667_1013246522	3300005367	Switchgrass Rhizosphere	CCINSAMWLFYTESTLMAAIWGAVAVGFLVWIIDDMRRGVPR*
Ga0070709_101452703	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VGTRALKLMVILLCLINAAMWLFYTESALMATLWGAVAVGFFVWIIDDMRRGVPR*
Ga0070709_103379763	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VGNRALKLMVILLCCINSAMWLFYTESTLMAMLWGAVAVGFLVWIIDDMRRGAPR*
Ga0070710_100532074	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VGNRALKLMVILLCCINSAMWLFYTESTLMAMLWGAVAVGFLVWIIDNMRRGAPR*
Ga0068855_1005253514	3300005563	Corn Rhizosphere	VGNRALKLMVILLCCINSAMWLFYTESTLMAAIWGAVAV
Ga0070664_1016124362	3300005564	Corn Rhizosphere	MVILLCLINAAMWLFYTESALMATLWGAVAVGFLVWIIDDMRRG
Ga0070762_108806992	3300005602	Soil	MGNRLLKLTVILLCSINAAMWELYTESPLMALGWLGIAFAFFIWILDDIRRY*
Ga0068860_1002074935	3300005843	Switchgrass Rhizosphere	MVILLCLINAAMWLFYTESALMATLWGAVAVGFLVWIIDD
Ga0073913_100961832	3300005940	Sand	MGERALKLLVILLCSVNAAMWLIYTESPFMATIWGGTALGFAFWIADDMRR*
Ga0080027_101580592	3300005993	Prmafrost Soil	MGNRVLKLMVILLCSINAATWELYTESRIMAIMWAAIAVAFVIWIIDDIRR*
Ga0070715_100557903	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	VILLCLINAAMWLFYTESALMATLWGAVAVGFLVWIIDDMRRGVPR*
Ga0079037_1012616952	3300006224	Freshwater Wetlands	MGNRALKLMVILLCSINAVTWQLYTEAPLMAALWAATAVGFGFWIADDMRR*
Ga0075021_106373891	3300006354	Watersheds	ISGGGRMGNRVLKLMVILLCSINAATWELYTESRIMAIMWAAIVVAFIIWIIDDMRR*
Ga0068871_1007274432	3300006358	Miscanthus Rhizosphere	RALKLMVILLCCINSAMWLFYTESTLMAAIWGAVAVGFLVWIIDDMRRGVPR*
Ga0075521_102969903	3300006642	Arctic Peat Soil	MGNRALKLMVILLSTINAAMWLLYTESPVMAGLWAAIAGGFFFWI
Ga0066665_111222632	3300006796	Soil	SYAPIGNRLLKLMVILLCTINALMWQFYTESTFMAIVWGGIAVAFVIWIIDDVRR*
Ga0075434_1001881771	3300006871	Populus Rhizosphere	MVILLCLINAAMWLFYTESALMATLWGAVAVGFFVWIIDD
Ga0075424_1019504171	3300006904	Populus Rhizosphere	RALKLMVILLCLINAAMWLFYTESALMATLWGAVAVGFFVWVIDDMRRGVPR*
Ga0079219_102304662	3300006954	Agricultural Soil	MVILLCCINAAMWLFYTESPVMAMLWGSVAVGFLVWIVDDMRRGTPR*
Ga0075435_1003361654	3300007076	Populus Rhizosphere	MVILLCLINAAMWLFYTESALMATLWGAVAVGFFVWIIDDMR
Ga0105105_103554111	3300009009	Freshwater Sediment	MGERALKLLVILLCSINAAMWLVYTESPFMATLWGGTALGFAFWIADDMRR*
Ga0105106_100385634	3300009078	Freshwater Sediment	MGNRALKLMVILLCTINAVMWQVYTEAPLMAAVWASTAVGFAFWIADDMRR*
Ga0105245_100536323	3300009098	Miscanthus Rhizosphere	MVILLCLINAAMWLFYTESALMAMLWGAVAVGFLVWIIDDMRRGVPR*
Ga0105247_100205886	3300009101	Switchgrass Rhizosphere	MVILLCLINAAMWLFYTESALMATLWGAVAVGFLVWIIDDMRRGVPR*
Ga0115027_100340963	3300009131	Wetland	MGERALKLLVILLCSVNAAMWLVYTESPFMATLWGGTALGFAFWIADDMRR*
Ga0105243_103631432	3300009148	Miscanthus Rhizosphere	VGNRALKLMVILLCCINSAMWLFYTESALMAMLWGAVAVGFLVWIIDDMRRGVPR*
Ga0105241_108413533	3300009174	Corn Rhizosphere	VGTRALKLMVILLCCINAAMWLFYTESPVMAMLWGAVAVGFLVWIIDDMRRSSFR*
Ga0105249_122689762	3300009553	Switchgrass Rhizosphere	VGNRALKLMVILLCCINSAMWLFYTESTLMATIWGAVAVGFLVWIIDDMRRGVPR*
Ga0074046_106919151	3300010339	Bog Forest Soil	GEGRRIAGPAQARRMNDAPGAVGNRLLKLTVILLCMVNCLMWEVYTESTMMAIVWAGIAIGFVIWIIDDMRR*
Ga0074045_100020997	3300010341	Bog Forest Soil	MGAGTRLLKLLVILLCCINFGMWELYAESTIVALFWAGIALGFAYWIIDDMRR*
Ga0074045_102325632	3300010341	Bog Forest Soil	MGAGTRLLKFTVILLCCVNSALWEVYTESTMMAIGWAGIALGFVYWIIDDIRHG*
Ga0074044_100545072	3300010343	Bog Forest Soil	MDTAIGTRLLKLMVILLCCVNCAMWELYAESTLMAIAWAGIAVGFVVWIVDDMRR*
Ga0134128_103797121	3300010373	Terrestrial Soil	MVILLCLINAAMWLFYTESALMAMLWGAVAVGFLVW
Ga0136449_1002309485	3300010379	Peatlands Soil	MGAGTRLLKLTVILLCCINSALWELYTESTMMALFWGGIALGFVYWIIDDMRR*
Ga0134121_100436724	3300010401	Terrestrial Soil	VGNRALKLMVILLCCINSAMWLFYTESTLMAMLWGAVAVGFLVWIIDDMRRGVPR*
Ga0120114_10073355	3300011998	Permafrost	MVILLCCINAAMWLFYTESPVMATLWGAVAVGFLVWIIDDMRRGTLR*
Ga0120139_10079436	3300012019	Permafrost	VGTRALKLMVILLCCINAAMWLFYTESPVMATLWGAVAVGFLVWIIDDMRRGTLR*
Ga0137363_109514442	3300012202	Vadose Zone Soil	MANTSYLAPIGNRALKLLVILLCCINALMWEYYTESRIMAILWGGIAVAFVFWIIDDMRR
Ga0137399_105408932	3300012203	Vadose Zone Soil	MATSQSYAPIGNRLLKLMVILLCTINALMWQFYTESTLMAIVWGGIAIAFVIWIIDDMRR
Ga0137362_108960082	3300012205	Vadose Zone Soil	MANTSYLAPIGNRALKLLVILLCCINALMWEYYTESRIMAILWGGIAVAFVFWIVDDMRR
Ga0137381_103616081	3300012207	Vadose Zone Soil	RLLKLMVILLCTINALMWQYYTESTFMAIIWGGIAIAFVIWIIDDMRR*
Ga0137379_112148511	3300012209	Vadose Zone Soil	MATSQSYAPIGNRLLKLMVILLCTINALMWQFYTESTFMAIVWGGIAIAFVIWIIDDMRR
Ga0137387_103948191	3300012349	Vadose Zone Soil	MATSQSYAPIGNRLLKLMVILLCTINALMWQFYTESTFMAIVWGGIAVAFVIWIIDDMRR
Ga0157324_10487592	3300012506	Arabidopsis Rhizosphere	ILLCLINAAMWLFYTESALMATLWGAVAVGFFVWIIDDMRRGVPR*
Ga0137358_109552802	3300012582	Vadose Zone Soil	MATSQSYVPLGNRMLKLMVILLCTINALMWEFYTESTLMAIMWGGIAIAFVVWIVDDMRR
Ga0164303_106553942	3300012957	Soil	MVILLCCINSAMWLFYTESVVMAMIWGAVAVGFLVWIIDDMRRGVPR*
Ga0164302_107383532	3300012961	Soil	VGNRALKLMVILLCLINAAMWLFYTESALMAMLWGAVAVGFLVWIIDDMRRGVPR*
Ga0164305_108042812	3300012989	Soil	VGTRALKLMVILLCLINAAMWLFYTESALMATLWGAVAVGFLVWVIDDMRRGVPR*
Ga0157373_102034792	3300013100	Corn Rhizosphere	MVILLCLINAAMWLFYTESALMAMLWGAVAVGFLVWIIDDVSRGVPR*
Ga0157370_110043103	3300013104	Corn Rhizosphere	VGTRALKLMVILLCLINAAMWLFYTESALMATLWGAVAVGFLVWIIDDMR
Ga0170573_110785912	3300013232	Sediment	ERALKLMVIVLSSINALMWLLYTESPVMASVWGGTAIGFAFWIADDMRR*
Ga0120127_100458003	3300013503	Permafrost	MGTRALKLMVILLCCINAAMWFFYTESALMGMLWGGVAIAFFVWIINDMRRGAPR*
Ga0120127_100978051	3300013503	Permafrost	MGNRALKLMVILLCCINAAMWLFYTESPLMAMMWGGVAVGFFGWILDDMRRGVPR*
Ga0120123_10054231	3300013770	Permafrost	VGNRALKLMVILLCCINAAMWLFYTESPVMATLWGAVAVGFLVWIIDDMRRGTLR*
Ga0120109_10672423	3300014052	Permafrost	VGTRALKLMVILLCCINAAMWLFYTESPLMAMMWGGVAVGFFGWILDDMRRGVPR
Ga0075360_10995181	3300014261	Natural And Restored Wetlands	MGERALKLLVILLCSVNAAMWLVYTESPFMATIWGGTALGFAFWIADDMRR*
Ga0167639_10007467	3300015080	Glacier Forefield Soil	VGSRALKLMVILLSCINAAMWLFYTESALMAMLWGAVAIAFFVWIIDDMRRGVPR*
Ga0132258_118041702	3300015371	Arabidopsis Rhizosphere	MATPPAYSAIGNRLLKLMVILLCSINALMWEYYTESRIMALMWLGIAVGFVIWIIDDMRR
Ga0187824_100221122	3300017927	Freshwater Sediment	MWLFYTESPLMAIVWGAVAVGFFVWIIDDIRRGVPR
Ga0187821_100773132	3300017936	Freshwater Sediment	MVILLCGINSAMWLFYTESPLMAIVWGAVAVGFFVWIIDDIRRGVPR
Ga0187782_111840822	3300017975	Tropical Peatland	MDSTRIANRMLKLTVVFLCLVNTAMWGLYTESPFMAFLWAATAIGFVFWIRDDTRRD
Ga0193745_10270593	3300020059	Soil	ALKLMVILLCLINAAMWLFYTESALMAMLWGAVAVGFLVWIIDDMRRGAPR
Ga0210384_100313278	3300021432	Soil	MGNRLLKLTVILLCSINAAMWELYTESPLMALGWLGIAFAFFIWILDDIRRY
Ga0213878_102892201	3300021444	Bulk Soil	VEQRVANRLLKFAVILLCGINSALWEVYTESTFMALVWAATAVGFVVWIFDDLRRD
Ga0222622_104954272	3300022756	Groundwater Sediment	VGTRALKLMVILLCLINAAMWLFYTESALMAMLWGAVAVGFLVWIIDDMRRGAPR
Ga0208076_10191101	3300025464	Arctic Peat Soil	MATSSSYTPLGNRLLKLMVILLCTINALMWEYYTESTFMAIVWGAIAIAFVVWIADDMRR
Ga0209584_101790362	3300025878	Arctic Peat Soil	MVILLSTINAAMWLLYTESPVMAGFWAVIAVGFFFWILDDVRRGI
Ga0207692_109476182	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	INSAMWLFYTESTLMAMLWGAVAVGFLVWIIDDMRRGAPR
Ga0207642_100034994	3300025899	Miscanthus Rhizosphere	VGTRALKLMVILLCLINAAMWLFYTESALMAMLWGAVAVGFLVWIIDDMRRGVPR
Ga0207654_110553712	3300025911	Corn Rhizosphere	VGTRALKLMVILLCCINAAMWLFYTESPVMAMLWGAVAVGFLVWIIDDMRRSSFR
Ga0207687_100513286	3300025927	Miscanthus Rhizosphere	AMWLFYTESALMATLWGAVAVGFLVWIIDDMRRGVPR
Ga0207709_109493261	3300025935	Miscanthus Rhizosphere	LMVILLCLINAAMWLFYTESALMAMLWGAVAVGFLVWIIDDMRRGVPR
Ga0209863_100724272	3300026281	Prmafrost Soil	MATSPSYAPLGNRLLKLMVILLCTVNALMWQYYTESTFMAIVWGAIAIAFVIWIVDDIRR
Ga0209890_100052442	3300026291	Soil	MATSPSYAPLGNRLLKMMVILLCSVNALMWQYYTESTFMAIVWGGIAIAFVAWIIDDMRR
Ga0208665_102869271	3300027715	Deep Subsurface	MGNRALKLMVILLCSINAVTWQLYTEAPLMAALWAATAVGFGFWIADDMRR
Ga0209703_13023402	3300027723	Freshwater Sediment	MGNRALKLMVILLCTINAVMWQVYTEAPLMAAVWASTAVGFAFWIADDMRR
Ga0209261_100481443	3300027735	Wetland Sediment	MGNRALKLMVILLCTINAVMWQMYTQAPMMAALWAATAIAFAFWIADDMRR
Ga0209038_101181292	3300027737	Bog Forest Soil	MDSAVGTRLLKLMVILLCCVNCAMWELYAESTLMAILWGGIAVGFVAWIVDDMRR
Ga0209288_102500162	3300027762	Freshwater Sediment	LLVILLCSINAAMWLVYTESPFMATLWGGTALGFAFWIADDMRR
Ga0209177_100982092	3300027775	Agricultural Soil	INAAMWLFYTESPVMAMLWGSVAVGFLVWIVDDMRRGTPR
Ga0209656_101274452	3300027812	Bog Forest Soil	MGAGTRLLKLLVILLCCINFAMWELYAESTIVALFWAGIALGFVYWIIDDMRR
Ga0209706_105095301	3300027818	Freshwater Sediment	MGNRALKLMVILLCTINAVMWQVYTEAPLMAAVWASTAVGFAF
Ga0209773_101459202	3300027829	Bog Forest Soil	MDSAVGTRLLKLMVILLCCVNCAMWELYAESTLMAILWGGIAVGFVFWIIDDMRR
Ga0209496_106232612	3300027890	Wetland	CSVNAAMWLVYTESPFMATLWGGTALGFAFWIADDMRR
Ga0209068_101503421	3300027894	Watersheds	MGNRVLKLMVILLCSINAATWELYTESRIMAIMWAAIVVAFIIWIIDDMRR
Ga0209254_100594884	3300027897	Freshwater Lake Sediment	MGERALKLLVILLSSINALMWLVYTESPFMASVWGGTAIAFMFWIADDMRR
Ga0209668_102337322	3300027899	Freshwater Lake Sediment	SVNAAMWLVYTESPFMATIWGGTALGFAFWIADDMRR
Ga0209253_107361961	3300027900	Freshwater Lake Sediment	MGERALKLLVILLSSINAVTWLIYTESPFMATVWGGIAIGFAFWIADDMR
Ga0209048_100172861	3300027902	Freshwater Lake Sediment	MGNRVLKLMVILLCSINALTWWYYTEAPLMAMMWAGIVVAFIAWVIDDIRR
Ga0302169_101486981	3300028679	Fen	LMVILLCSINALTWELYTESRIMAIMWAAIAVAFVIWIIDDMRR
Ga0302169_101501332	3300028679	Fen	MGNRVLKLMVILLCSINALTWELYTESRIMAIMWAAIAVAFVIWIIDDIRR
Ga0311371_122011362	3300029951	Palsa	MDTGVGNRLLKLTVILLCMVNCLMWEVYTESTMMAIVWAGIAVGFVFWIIDDL
Ga0311336_100329024	3300029990	Fen	MGNRVLKLMVILLCSINAATWELYTESRIMAIMWAAIAVAFVIWIIDDIRR
Ga0311337_100276053	3300030000	Fen	MGNRVLKLMVILLCSINALTWELYTESRIMAIMWAAIVVAFVIWIIDDIRR
Ga0302273_11249211	3300030048	Bog	MGNRVLKLMVILLCSINALTWELYTESRIMAIMWAAIAVAFVIWIIDDMRR
Ga0311349_122179612	3300030294	Fen	DDAPHRHMAAPPAYSAIGNRLLKLMVILLCSINALMWEYYTESRIMALVWLGIAVGFVVWIIDDMRR
Ga0311372_118981232	3300030520	Palsa	MDTGVGNRLLKLTVILLCMVNCLMWEVYTESTMMAIVWAGIAVGFVFWIIDDLRR
Ga0307500_101375362	3300031198	Soil	MVILLCLINAAMWLFYTESAVMAMLWGAIAVGFLAWIIDDMRRGTPR
Ga0307469_119297781	3300031720	Hardwood Forest Soil	VGTRALKLMVILLCLINAAMWLFYTESALMATVWGAVAVGFFVWIIDDMRRGAPR
Ga0302321_1032702122	3300031726	Fen	MATSPAYSAIGNRLLKLMVILLSCVNAMMWEFYTESRMMAIMWVGIAIAFVIWIIDDMRR
Ga0307477_110079152	3300031753	Hardwood Forest Soil	MDSAIGNRLLKLMVILLCCVNCAMWELYAESTLMAIAWAGIAVGFVVWIVDDMRR
Ga0311301_101466184	3300032160	Peatlands Soil	MGAGTRLLKLTVILLCCINSALWELYTESTMMALFWGGIALGFVYWIIDDMRR
Ga0307470_105951912	3300032174	Hardwood Forest Soil	MATSPAYSAIGNRLLKLTVILLCSINALMWEYYTESRIMAIMWLGIAVGFVIWIIDDMRR
Ga0307471_1018499862	3300032180	Hardwood Forest Soil	MANPSSLAPIGNRALKLMVILLCCINALMWEYYTESRMMAIMWGGIAVAFVFWIIDDMRR
Ga0315271_100224697	3300032256	Sediment	MDFGARALKVMVIFLCGINFAMWLLYTESPTMAAIWMGTAVAFLFWLLDDMRR
Ga0315271_105092982	3300032256	Sediment	MDFSARVLKLMVILLSTINAAMWLLYTQSPVMASIWMGTAIAFLFWILDDMRR
Ga0314862_0074336_603_758	3300033803	Peatland	LSTRLLKTAVVFLCAVNALMWEYYTQSRMMAILWAAIAVAFVVWIVDDMRR
Ga0373894_020994_764_919	3300034074	Sediment Slurry	MGERALKLLVILLCSVNAAMWLVYTESPFMATLWGGTALGFAFWIGDDMRR
Ga0370503_0202643_428_583	3300034196	Untreated Peat Soil	MGERALKLLVILLSSINALMWLVYTESPFMATVWGGTAIGFMFWIADDMRR

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.76
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.76
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F061329

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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