NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F061242

Metagenome / Metatranscriptome Family F061242

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F061242
Family Type Metagenome / Metatranscriptome
Number of Sequences 132
Average Sequence Length 76 residues
Representative Sequence MTPNVFKWTDFAVARGIRIAAILLIALILNRLLRTLTRRLIPAAGTEGLGRIARMREQHVKTLAGL
Number of Associated Samples 110
Number of Associated Scaffolds 132

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 36.36 %
% of genes near scaffold ends (potentially truncated) 99.24 %
% of genes from short scaffolds (< 2000 bps) 93.94 %
Associated GOLD sequencing projects 104
AlphaFold2 3D model prediction Yes
3D model pTM-score0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (76.515 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(23.485 % of family members)
Environment Ontology (ENVO) Unclassified
(23.485 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(39.394 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 62.77%    β-sheet: 0.00%    Coil/Unstructured: 37.23%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.38
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 132 Family Scaffolds
PF06628Catalase-rel 2.27
PF03544TonB_C 2.27
PF13620CarboxypepD_reg 0.76
PF00149Metallophos 0.76
PF13442Cytochrome_CBB3 0.76
PF01797Y1_Tnp 0.76
PF00903Glyoxalase 0.76
PF00069Pkinase 0.76
PF11453DUF2950 0.76

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 132 Family Scaffolds
COG0515Serine/threonine protein kinaseSignal transduction mechanisms [T] 3.03
COG0753CatalaseInorganic ion transport and metabolism [P] 2.27
COG0810Periplasmic protein TonB, links inner and outer membranesCell wall/membrane/envelope biogenesis [M] 2.27
COG1943REP element-mobilizing transposase RayTMobilome: prophages, transposons [X] 0.76


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A76.52 %
All OrganismsrootAll Organisms23.48 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001593|JGI12635J15846_10493154Not Available724Open in IMG/M
3300001593|JGI12635J15846_10496355Not Available721Open in IMG/M
3300004091|Ga0062387_101693137Not Available513Open in IMG/M
3300005434|Ga0070709_10676278All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium801Open in IMG/M
3300005439|Ga0070711_101076728Not Available692Open in IMG/M
3300005542|Ga0070732_10055644Not Available2290Open in IMG/M
3300005618|Ga0068864_102474799Not Available525Open in IMG/M
3300005921|Ga0070766_10319350Not Available1001Open in IMG/M
3300005921|Ga0070766_11065469Not Available557Open in IMG/M
3300005994|Ga0066789_10221747Not Available795Open in IMG/M
3300006050|Ga0075028_100069896All Organisms → cellular organisms → Bacteria → Acidobacteria1732Open in IMG/M
3300006052|Ga0075029_100312092Not Available1006Open in IMG/M
3300006086|Ga0075019_10699708Not Available641Open in IMG/M
3300006102|Ga0075015_100425205Not Available754Open in IMG/M
3300006162|Ga0075030_101064292All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium636Open in IMG/M
3300006172|Ga0075018_10175265Not Available1004Open in IMG/M
3300006174|Ga0075014_100149369Not Available1140Open in IMG/M
3300006176|Ga0070765_102156990Not Available520Open in IMG/M
3300006797|Ga0066659_10634030Not Available869Open in IMG/M
3300007255|Ga0099791_10337643Not Available721Open in IMG/M
3300007258|Ga0099793_10687601Not Available516Open in IMG/M
3300007265|Ga0099794_10216291Not Available984Open in IMG/M
3300009088|Ga0099830_11535906All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium554Open in IMG/M
3300009090|Ga0099827_11796892Not Available534Open in IMG/M
3300009522|Ga0116218_1091012Not Available1389Open in IMG/M
3300009839|Ga0116223_10851516Not Available520Open in IMG/M
3300010371|Ga0134125_11131924Not Available856Open in IMG/M
3300010373|Ga0134128_11669071Not Available701Open in IMG/M
3300010376|Ga0126381_101009666All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1200Open in IMG/M
3300012189|Ga0137388_12043317Not Available500Open in IMG/M
3300012199|Ga0137383_10330478Not Available1116Open in IMG/M
3300012203|Ga0137399_11602352Not Available539Open in IMG/M
3300012205|Ga0137362_11391452Not Available587Open in IMG/M
3300012205|Ga0137362_11612377Not Available536Open in IMG/M
3300012208|Ga0137376_10547482Not Available1003Open in IMG/M
3300012209|Ga0137379_10242382All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1716Open in IMG/M
3300012210|Ga0137378_10417245All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1245Open in IMG/M
3300012211|Ga0137377_11926457Not Available508Open in IMG/M
3300012349|Ga0137387_10118413All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1864Open in IMG/M
3300012349|Ga0137387_10928461Not Available628Open in IMG/M
3300012361|Ga0137360_10263046All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1421Open in IMG/M
3300012363|Ga0137390_10855110Not Available866Open in IMG/M
3300012363|Ga0137390_11804961Not Available543Open in IMG/M
3300012917|Ga0137395_10066701All Organisms → cellular organisms → Bacteria → Acidobacteria2312Open in IMG/M
3300012917|Ga0137395_10781495Not Available691Open in IMG/M
3300012923|Ga0137359_10502022All Organisms → cellular organisms → Bacteria1070Open in IMG/M
3300012925|Ga0137419_10968388Not Available703Open in IMG/M
3300012929|Ga0137404_10643287Not Available956Open in IMG/M
3300012944|Ga0137410_11517632Not Available585Open in IMG/M
3300014152|Ga0181533_1077639Not Available1565Open in IMG/M
3300014165|Ga0181523_10259174Not Available991Open in IMG/M
3300014169|Ga0181531_10577852Not Available696Open in IMG/M
3300014200|Ga0181526_10618860Not Available684Open in IMG/M
3300014968|Ga0157379_10350166Not Available1352Open in IMG/M
3300015241|Ga0137418_10346436All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1227Open in IMG/M
3300015245|Ga0137409_10938177Not Available702Open in IMG/M
3300017928|Ga0187806_1127277Not Available829Open in IMG/M
3300017930|Ga0187825_10279053Not Available618Open in IMG/M
3300017930|Ga0187825_10399961Not Available528Open in IMG/M
3300017933|Ga0187801_10047636Not Available1551Open in IMG/M
3300017936|Ga0187821_10061557All Organisms → cellular organisms → Bacteria1353Open in IMG/M
3300017942|Ga0187808_10015731All Organisms → cellular organisms → Bacteria → Acidobacteria3015Open in IMG/M
3300017993|Ga0187823_10003970All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_213340Open in IMG/M
3300017993|Ga0187823_10368229Not Available516Open in IMG/M
3300018035|Ga0187875_10269267Not Available926Open in IMG/M
3300018047|Ga0187859_10810259Not Available538Open in IMG/M
3300018064|Ga0187773_11213975Not Available508Open in IMG/M
3300018088|Ga0187771_10775317Not Available813Open in IMG/M
3300020581|Ga0210399_10225044All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1563Open in IMG/M
3300020581|Ga0210399_10360738Not Available1213Open in IMG/M
3300020582|Ga0210395_10636066Not Available800Open in IMG/M
3300021086|Ga0179596_10447907Not Available653Open in IMG/M
3300021171|Ga0210405_10404279Not Available1075Open in IMG/M
3300021406|Ga0210386_10101513All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae2359Open in IMG/M
3300021407|Ga0210383_10615476Not Available936Open in IMG/M
3300021420|Ga0210394_11104451Not Available684Open in IMG/M
3300021433|Ga0210391_10819989Not Available727Open in IMG/M
3300021433|Ga0210391_11563872Not Available505Open in IMG/M
3300021478|Ga0210402_11411390Not Available624Open in IMG/M
3300021478|Ga0210402_11682291Not Available561Open in IMG/M
3300021479|Ga0210410_10070316Not Available3068Open in IMG/M
3300021479|Ga0210410_11171568Not Available660Open in IMG/M
3300021559|Ga0210409_10396180Not Available1236Open in IMG/M
3300021559|Ga0210409_10913639Not Available752Open in IMG/M
3300025906|Ga0207699_10381202Not Available1001Open in IMG/M
3300025928|Ga0207700_10501107All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1074Open in IMG/M
3300025929|Ga0207664_11849946Not Available526Open in IMG/M
3300025939|Ga0207665_10222712All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1383Open in IMG/M
3300025941|Ga0207711_11816597Not Available553Open in IMG/M
3300026285|Ga0209438_1057909All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1277Open in IMG/M
3300026557|Ga0179587_10154600All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1432Open in IMG/M
3300026557|Ga0179587_10200586All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1264Open in IMG/M
3300026557|Ga0179587_10316918Not Available1007Open in IMG/M
3300027181|Ga0208997_1022494Not Available894Open in IMG/M
3300027480|Ga0208993_1043144Not Available809Open in IMG/M
3300027535|Ga0209734_1067503Not Available680Open in IMG/M
3300027537|Ga0209419_1062508Not Available729Open in IMG/M
3300027565|Ga0209219_1132681Not Available604Open in IMG/M
3300027591|Ga0209733_1077523Not Available856Open in IMG/M
3300027674|Ga0209118_1147155Not Available650Open in IMG/M
3300027842|Ga0209580_10084295Not Available1523Open in IMG/M
3300027842|Ga0209580_10623366Not Available534Open in IMG/M
3300027884|Ga0209275_10438679Not Available740Open in IMG/M
3300027894|Ga0209068_10062761All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1905Open in IMG/M
3300027894|Ga0209068_10567971Not Available658Open in IMG/M
3300027905|Ga0209415_10602763Not Available813Open in IMG/M
3300027905|Ga0209415_10700568Not Available726Open in IMG/M
3300027908|Ga0209006_10505981Not Available1007Open in IMG/M
3300027908|Ga0209006_10611333Not Available899Open in IMG/M
3300027911|Ga0209698_10253038All Organisms → cellular organisms → Bacteria → Acidobacteria1406Open in IMG/M
3300028047|Ga0209526_10175179Not Available1495Open in IMG/M
3300028047|Ga0209526_10344476All Organisms → cellular organisms → Bacteria → Acidobacteria1000Open in IMG/M
3300028563|Ga0265319_1001610All Organisms → cellular organisms → Bacteria13160Open in IMG/M
3300028800|Ga0265338_10807231Not Available643Open in IMG/M
3300029636|Ga0222749_10128089All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1218Open in IMG/M
3300030007|Ga0311338_11477309Not Available628Open in IMG/M
3300031057|Ga0170834_112103140Not Available902Open in IMG/M
3300031231|Ga0170824_105749986Not Available911Open in IMG/M
3300031234|Ga0302325_12649108Not Available593Open in IMG/M
3300031236|Ga0302324_101235833Not Available992Open in IMG/M
3300031239|Ga0265328_10145542Not Available890Open in IMG/M
3300031474|Ga0170818_109736874Not Available863Open in IMG/M
3300031672|Ga0307373_10291057Not Available1048Open in IMG/M
3300031708|Ga0310686_101723499All Organisms → cellular organisms → Bacteria → Acidobacteria2045Open in IMG/M
3300031708|Ga0310686_102139864Not Available625Open in IMG/M
3300031715|Ga0307476_10338223All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1107Open in IMG/M
3300031820|Ga0307473_10729019Not Available699Open in IMG/M
3300031820|Ga0307473_11244028Not Available555Open in IMG/M
3300031962|Ga0307479_10224472All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1853Open in IMG/M
3300032160|Ga0311301_10947380All Organisms → cellular organisms → Bacteria → Acidobacteria1150Open in IMG/M
3300032180|Ga0307471_102302293Not Available680Open in IMG/M
3300033405|Ga0326727_11185469Not Available534Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil23.48%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil12.12%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil9.85%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds7.58%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment6.06%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil3.79%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.79%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.79%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog3.03%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil3.03%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil2.27%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil2.27%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa2.27%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere2.27%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland1.52%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.52%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.52%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland1.52%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil0.76%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.76%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.76%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.76%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil0.76%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.76%
SoilEnvironmental → Terrestrial → Soil → Clay → Unclassified → Soil0.76%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.76%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.76%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.76%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.76%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300004091Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005542Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1EnvironmentalOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300005994Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049EnvironmentalOpen in IMG/M
3300006050Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014EnvironmentalOpen in IMG/M
3300006052Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013EnvironmentalOpen in IMG/M
3300006086Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013EnvironmentalOpen in IMG/M
3300006102Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013EnvironmentalOpen in IMG/M
3300006162Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012EnvironmentalOpen in IMG/M
3300006172Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014EnvironmentalOpen in IMG/M
3300006174Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014EnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009522Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaGEnvironmentalOpen in IMG/M
3300009839Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaGEnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014152Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_60_metaGEnvironmentalOpen in IMG/M
3300014165Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaGEnvironmentalOpen in IMG/M
3300014169Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaGEnvironmentalOpen in IMG/M
3300014200Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaGEnvironmentalOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015245Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300017928Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1EnvironmentalOpen in IMG/M
3300017930Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5EnvironmentalOpen in IMG/M
3300017933Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1EnvironmentalOpen in IMG/M
3300017936Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1EnvironmentalOpen in IMG/M
3300017942Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3EnvironmentalOpen in IMG/M
3300017993Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3EnvironmentalOpen in IMG/M
3300018035Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10EnvironmentalOpen in IMG/M
3300018047Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10EnvironmentalOpen in IMG/M
3300018064Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MGEnvironmentalOpen in IMG/M
3300018088Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MGEnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300020582Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-OEnvironmentalOpen in IMG/M
3300021086Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021406Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-OEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021433Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-OEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300025906Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026285Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300027181Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027480Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027535Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027537Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027565Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027591Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027674Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027842Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027884Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)EnvironmentalOpen in IMG/M
3300027894Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300027905Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)EnvironmentalOpen in IMG/M
3300027908Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027911Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300028047Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300028563Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaGHost-AssociatedOpen in IMG/M
3300028800Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaGHost-AssociatedOpen in IMG/M
3300029636Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030007I_Palsa_E1 coassemblyEnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031234Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2EnvironmentalOpen in IMG/M
3300031236Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1EnvironmentalOpen in IMG/M
3300031239Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaGHost-AssociatedOpen in IMG/M
3300031474Fir Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031672Soil microbial communities from Risofladan, Vaasa, Finland - OX-2EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031715Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300033405Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MYEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12635J15846_1049315413300001593Forest SoilMAPNVFKWTDFALGHTLRLASIVLIALILNRLLRTVTRRLIPAAGAEGLGRIARMREQHAKTLAGLLYSAGTAVIMIGAVLTALPEF
JGI12635J15846_1049635523300001593Forest SoilMNPNVAKWTDFAAARGIRIAAILLIALILNRLLRSLTRRLIPSAGSEGLGRIARMREHHVKTLAGLLYSAGT
Ga0062387_10169313723300004091Bog Forest SoilMTPNVFKWTDFAVARGIRIAAILLIALILNRLLRTLTRRLIPAAGTEGLGRIARMREQHVKTLAGL
Ga0070709_1067627813300005434Corn, Switchgrass And Miscanthus RhizosphereMPSNLLRSTDFWLEHSLRLATIVAIALILIRILRTVTNRLIPAAGEGLGRIARMREQHTKTLAGLLYSA
Ga0070711_10107672813300005439Corn, Switchgrass And Miscanthus RhizosphereMLSNIFKSTDFWLEHSLRLVSIVLIALILIRILRTVTRRLIPAAGEGLGRIARMREQHTKTLASLLYSAGTAVIIVGAILTALPEFGFNITPIA
Ga0070732_1005564413300005542Surface SoilMTPIVFKWTDIAAAHGVRVIAILVIALILNRVLRSLTRRLIPAGGTEGLGRIARMHEQHVKT
Ga0068864_10247479923300005618Switchgrass RhizosphereMNPNVFKWTDIAAARGIRIVAILLIALILNRLLRSVTRRMIPASGTEGLGRIARMREQ
Ga0070766_1031935033300005921SoilMTPIVFKWTDIAAAHGIRIVTILVIALILNRILRSLTRRLIPKAGTEGLGRVARMHEQHVKT
Ga0070766_1106546913300005921SoilMTPNVFKWTDFAAARGIRIAAILLIALILNRLLRSLTRRLIPTAGSEGLGRIARMR
Ga0066789_1022174713300005994SoilLLADIMTPNVFKWTDFAVARGIRIAAIVIIALILNRLLRALTRRLIPAPGAESTGRIARMREQHVKTLSGLMYSAGTAIIM
Ga0075028_10006989613300006050WatershedsMNPNVFQWTDFAVARGIRVAAILLIALVLNRLLRVLTRRLIAPAGSESTGRIARIREQHVKTLAGLLYSAGTAVIIV
Ga0075029_10031209233300006052WatershedsMNPNVFKWTDFAVARGIRLAAIVVIALILNRLLRALTRRLIPPPGSESSGRIARIREQHVKTLAGLLY
Ga0075019_1069970813300006086WatershedsMTPIVFKWTDIAAAHGVRVIAILVIALILNRILRSLTRRLIPAGGTEGLGRIARMHEQHVKTLAGLIY
Ga0075015_10042520523300006102WatershedsMTPIVFKWTDFAVARGIRIAAILVIALILNRLLRMVTRRLIPAPGSESTGRIARMREQHVKTLAGLLYSAGTAI
Ga0075030_10106429223300006162WatershedsMAVIHTVRLAAIFLIALILNRLLRILTRRLIPVAGSEAVGRIARMHEQHVKTLAGLVY
Ga0075018_1017526513300006172WatershedsMTPNLFRWTDFAAARGIRIGAIVLIALILNRLLKSLTHRLIPAAGAEGLGRIARMREQHVKTLSGLLYSAGTAIIIVGAILTA
Ga0075014_10014936933300006174WatershedsMTPIVFKWTDFAVARGIRIAAIVLIALVLNRLLRSLTRRLLPVAGSEGLGRMARMREQHVKTLSSLLYSAGTAA
Ga0070765_10215699013300006176SoilMNPNVAKWTDFAAARGIRIAAILLIALILNRLLRSVTRRLIPSAGGEGLGRIARMREHHVKTLAGLLYSAGTAVIVVGAIL
Ga0066659_1063403023300006797SoilMVPSAFKWTDLAFGHSLRLASIVLIALILNRLLRLLTRRLIPAAGAEGLGRIARMREQHIKTLAGLLYSAGTAVIVIGVILL
Ga0099791_1033764313300007255Vadose Zone SoilMVPSVFKWTDLAVGHSLRLASIVLIAVILNRLLRMLTRRLIPAPGAEGPG
Ga0099793_1068760123300007258Vadose Zone SoilMVPSVFKWTDLAFGHSLRLASIVLIAVILNRLLRMLTRRLIPAPGVEGLGRIARMREQHTKTLAGLLYSAGTAVIIVGAILMALPEFGFNITPIAAVAGLA
Ga0099794_1021629113300007265Vadose Zone SoilMTPDIFKWTDIAAARGIRLAAIWLLALILNRLLRTLTRRLIPASGSEGLGRIARLHEQHVRTLAGLMYSAGTALIIVGA
Ga0099830_1153590613300009088Vadose Zone SoilMAPNVFKWSDLMFGRGLRLTSIVLIAFILNRLLRALTRRLIPAAGAEG
Ga0099827_1179689223300009090Vadose Zone SoilMVPSVFKWTDLAVGHSLRLASIVLIALLLNRLLRMLTRRLIPAAGAEGLGRIARMREQHIKTLAGLLYSAGTA
Ga0116218_109101233300009522Peatlands SoilMTPIVFKWTDFAVADGLRLATILVIALVLNRILRVLTRRLIPAAGAEG
Ga0116223_1085151623300009839Peatlands SoilMTPNVFKWTDFAVARGIRIAAIVLIALILNRLLRSLTRRLIPAAGAEGPGRIA
Ga0134125_1113192413300010371Terrestrial SoilMTPNVFKWTDFALGHGLRLAGILVIAFILNRLLRALTRRLVPSGGSDGLGRIARMREQHVKTLASLVYSAGTAVIIIGAVLT
Ga0134128_1166907113300010373Terrestrial SoilMSPNVFKWTDFALGHGLRLAGILVIAFILNRLLRAVTRRLVPTGSDGLGRIARMREQHVKTLASLVYSAGTAVIIIGAILTALPEFGFN
Ga0126381_10100966633300010376Tropical Forest SoilMNPNFSKWTDFALTDGLRLATILLVALILNRILRVLTNRLIPAVGAESLGRIARMREQHVKTLSSLLYSAGTAVIVSGAILTALPLFGFNVTPVAAVA
Ga0137388_1204331713300012189Vadose Zone SoilMTPNLFKWTDFAVADGMRLATILVIALVLNRVLRVVTRRLIPVAGGEGLGRIARMREQHVKTLSGLLYSAGTAIIAVGAILTALPVFGFNVTPLAAVAGLASLAF
Ga0137383_1033047833300012199Vadose Zone SoilMTPNVFKWSDLMLGRGLRLTSIVLIAFILNRLLRALTRRLIPVAGAEGLG
Ga0137399_1160235213300012203Vadose Zone SoilMAPNVSKLADFALAHSLRLASIVLIAFVLNRLLRTLTRRLIPAAGAESLGRIARMREQHIKTLTGLLYSAGTAVIIIGAVLTALPEFGFNITPIAAVA
Ga0137362_1139145223300012205Vadose Zone SoilMVPSVFKWTDLAFGHSLRLASIVLIAVILNRLLRMLTRRLIPAPGVDGLGRIARMREQHTKTLAGLLYSAGTAVIIVGAILMALPEFGFNITPIAAVAGLASLAFGFG
Ga0137362_1161237723300012205Vadose Zone SoilMVPSVFKWTDLAVGHSLRLASIVLIAVILNRLLRMLTRRLIPAPGAEGPGRIARMREQHTKTLAGLLYSAGTAVIIVGAILMALPEFGFNITPIAAVAGLASLAFGFG
Ga0137376_1054748223300012208Vadose Zone SoilMVPSVFKWTDLAFGHSLRLASIVLIAVILNRLLRMLTRRLIPAPGVDGLGRIARMREQHTKTLAGLLYSAGTAVIIVGAILMALPEFGFNI
Ga0137379_1024238213300012209Vadose Zone SoilMTPNVFKWSDLMLGRGLRLTSIVLIAFILNRLLRALTRRLIPVAGAEGLGRIARMREQH
Ga0137378_1041724533300012210Vadose Zone SoilMAPNVFKWSDLMLGRGLRLTSIVLIAFILNRLLRALTRRLIPVAGAEGLGRIA
Ga0137377_1192645723300012211Vadose Zone SoilMVPSVFKWTDLAFGHSLRLASIVLIAVILNRLLRMLTRRLIPAPGAEGPGRIARMREQHTKTLAGLLYSAGTAVIIVGAILMALPEFGF
Ga0137387_1011841313300012349Vadose Zone SoilMAPNVFKWSDLMLGRGLRLTSIVLIAFILNRLLRALTRRLIPVAGAEGLGRIARMREQHAKTLAGL
Ga0137387_1092846113300012349Vadose Zone SoilMTPNLFKWSDLMLGRGLRLTSIVLIAFILNRLLRALTRRLIPVAGAEGLGRIARMREQHAKTLAGL
Ga0137360_1026304633300012361Vadose Zone SoilMLPSAFRWTDLAFGHSLRLASIVLIAFILNRLLRMLTRRLIPAAGAEGLGRIARMREQHIKTLAGLLYSAGTAVIIIGAILMALPEFGFNITPIAAVAGL
Ga0137390_1085511013300012363Vadose Zone SoilMTPDISKWTDIAAARGIRLAAILLLALILNRLLRTLTRRLIPASGSEGLGRIARLHEQHVRTLAG
Ga0137390_1180496123300012363Vadose Zone SoilMTPNLFKWTDFAVADGIRLATILVVALVLNRILRVVTRRLIPVAGGEGLGRIARMREQHVKTLSGLLYSAGTAVIAVGAIL
Ga0137395_1006670153300012917Vadose Zone SoilMSPNVSKWTDFALAHGLRLASIVLIAFVLNRLLRTLTRRLIPAAGAEGLGRIARMREQHIKTLAGLLYSAGTAVIIIGAVLTALPEFGFNI
Ga0137395_1078149513300012917Vadose Zone SoilMTPNLFKWTDFAVADGIRLATILVVALVLNRVLRVVTRRLIPVAGGEGLGRIARMREQHVKTLSGLLYSAGTAVIAVGAILTALPVFGFNVTPLAAVAGLASLAFGF
Ga0137359_1050202213300012923Vadose Zone SoilMTPNVSKWTEFAVGHGARLLVILLIALILNRLLRTLTRRLIPAVGTETVGRIARMREQHVNTLAGLLYS
Ga0137419_1096838823300012925Vadose Zone SoilMAPNVSKLADFALAHSLRLASIVLIAFILNRLLRTLTRRLIPAAGADGLGRIARMRGQHTKTLAGLLYSAGTAVIVVGAILTALPEFGFNI
Ga0137404_1064328713300012929Vadose Zone SoilMVPSVFKWTDLAVGHSLRLASIVLIALILNRLLHMLTRRLLPAAGAEGLGRLARMLEQHTKTLAGLLYSAGTAVIIIGA
Ga0137410_1151763213300012944Vadose Zone SoilMVPSVFKWTDLAFGHSLRLASIVLIAVILNRLLRMLTRRLIPAPGAEGPGRIA
Ga0181533_107763933300014152BogMAPNVFKWTDFALGHGVRLISILLIALILNRLLRTLTRRLIPAGGAEGIGRVARMREQHTKTLAGLLYSAGTALIIIGAILTALPEFGFNVTPIAAAAGLASLAVGF
Ga0181523_1025917413300014165BogMTLNAFQWTDIALARGLRLLSILLIAFILNRLLKTVTRRLIPVAGSEGFGRIARMREQH
Ga0181531_1057785223300014169BogMTPIVYKWTDFAAARGIRITAIVVIAIILNRLLRTLTRRLIPAAGAEGLGRIARMREQHVKTLSGLLYSAGTAIIIIGAILTALPEFGFNV
Ga0181526_1061886013300014200BogMAPNVYKWTDFALGHGIRVLTILLIALILNRLLRTLTRRLVPAAGSEAIGRIARMREQHVKTLAGLL
Ga0157379_1035016613300014968Switchgrass RhizosphereMNPNVFKWTDIAAARGIRIVAILLIALILNRLLRSVTRRMIPASGTEGLGRIARMREQHVKTLAGLLYSAGTAFIVVGAILTALPEFGFNVTPIAA
Ga0137418_1034643633300015241Vadose Zone SoilMAPNVSKLADFALAHSLRLASIVLIAFILNRLLRTLTRRLIPAGGAEGPGRIARMREQHIKTLAGLLYSAGTAVI
Ga0137409_1093817723300015245Vadose Zone SoilMTPDIFKWTDIAAARGIRLAAILLLALILNRLLRTLTRRLIPASGSEGLGRIARLHEQHVRTLAGLMYSAGTALIIV
Ga0187806_112727713300017928Freshwater SedimentLPPGIMTPNVFKWTDFAAARGIRIAAIVLIALILNRLLRSLTRRLIPAAGSDGIGRIARMREQHVKTLAGL
Ga0187825_1027905313300017930Freshwater SedimentMTPNVFKWTDFAAARGIRIAAILLIAVILNRVLRSLTRRLIPAAGAEGLGRIARMREQHVKTLAGLLYSAGTAVIIIGAILTALPEFGFNVTP
Ga0187825_1039996123300017930Freshwater SedimentMNPNAFKWTDFAATRGIRILAIFLLALLLNRLLRSLTRRLVPAAGSEGLGRLARLREQQVKTLAGLLYSAGTAIIII
Ga0187801_1004763613300017933Freshwater SedimentMTPNVFKWTDFAAARGIRIAAIVVIALILNRLLRSLPRRLIPASGSDGIGRIARMREQ
Ga0187821_1006155733300017936Freshwater SedimentMNPNLFKWTDIAAAHALRILAILLIALIFNRLLRSLTRRLIRSSTTESLGRIARLHEQHVKTLAGLVYSAGTALIVVGAILTALPEFGFNV
Ga0187808_1001573113300017942Freshwater SedimentMTPNVFKWTDFAAARGIRIAAILLIAVILNRVLRSLTRRLIPAAGAEGLGRIARMREQHVKTLAGLLYSAGTAVIIIGAILTALPEFGFNVTPTARLARPAVSER
Ga0187823_1000397013300017993Freshwater SedimentMTPIVFKWTDIAAAHGIRIFAILVIALILNRILRSLTRRLIPAAGNEGLGRVARMHEQHVKTLAGLMYSAGTAIIVV
Ga0187823_1036822913300017993Freshwater SedimentMNPNLFKWTDLAAARGIRILTIAVLALVLIRVLRSLTRRLIPKAGAEGSGRLARMHEHH
Ga0187875_1026926713300018035PeatlandMAPNVYKWTDFALGHGIRVLTILLIALILNRLLRTLTRRLVPAAGSEAIGRIARMREQHVKT
Ga0187859_1081025913300018047PeatlandMAPNVYKWTDFALAHGIRVLSILLLALVLNRLLRTLTQRLIPAAGHEGIGRIARMREHHVRTLAGLLYSAGTALIIIGAILTALPEFG
Ga0187773_1121397523300018064Tropical PeatlandMTPNLFKWTDLAAARGIRILTIAVVALVLIRVLRTLTRRLIPKGGTEGAGRLA
Ga0187771_1077531723300018088Tropical PeatlandMAPNVFKWTDFALAHGVRLASVLLMALILNRLLRTLTRRLIPAGSAEGGGRIARMRDQHIRTLSGLLYSAGTAVIIIAAILMALPEFGFNVTP
Ga0210399_1022504413300020581SoilMTPIVFKWTDFAVARGIRIAAIVLIALVLNRLLRSLTRRLLPVAGSEGLGRIARMREQHV
Ga0210399_1036073813300020581SoilMTPIVFKWTDIAAARGFRIAAIVLIALILNRLLRSLTRRLIPAAGTEGLGRIARMHEQHVKTLAGLLY
Ga0210395_1063606623300020582SoilMTPIVFKWTDIAAAHGIRIVTILVIALILNRILRSLTRRLIPKAGTEGLGRVARMHEQHVKTLAGLMYSAGTALIVVGAILTAL
Ga0179596_1044790723300021086Vadose Zone SoilMVPSVFKWTDLAVGHSLRLASIVLIAVILNRLLRMLTRRLIPAPGAEGPGRIAR
Ga0210405_1040427913300021171SoilMKWTDFAAARGIRILAIFLIALVLNRILRSLTRRLVPAAGSEGLGRLAKMREQHVKTLAGLLYSA
Ga0210386_1010151313300021406SoilMSPNLFKWTDFAVARGIRIAAILVIALILNRLLRVVTRRLIPLAGTESSGRIARMR
Ga0210383_1061547623300021407SoilMTPNVFKWTDFAVGHGIRVAAILLIALILNRLLRSLTRRLIPSAGSDGIGRIARMREEHVKTLASLLYTAGTAVIIIGAVLTAL
Ga0210394_1110445123300021420SoilMTPNVSKWTEFAVGHGVRLLVILLIALILNRLLRTLTRRLIPAVGTETVGRIARMREQQINTLAGLLYSAGTAVILIGAILTAL
Ga0210391_1081998913300021433SoilMNPNAIKWTDFAATRGIRILAIFLIALVLNRILRSLTRRLVPAAGSEGLGRLAKMREQHVKTLASLLYSAGAAVIVVGAVLTA
Ga0210391_1156387213300021433SoilMTPIVFKWTDIAAAHGIRIVTILVIALVLNRILRSLTRRLIPKAGTEGLGRVARMHEQHVKTLAGLMYSAGTALIVVGAILTALPEFGFNVTPIAAA
Ga0210402_1141139023300021478SoilMTPNVSKWTEFAVGHGVRLLVILLIALILNRLLRTLTRRLIPAVGTETVGRIARMREQQINTLAG
Ga0210402_1168229113300021478SoilMTPNLFKWTDFAVADGMRLATILVIALVLNRILRVVTRRLIPVASGEGLGRIARMREQHVKTLSSLLYSAGTGVIAMGAILTALPV
Ga0210410_1007031613300021479SoilMPNALKWSDFAATRGVRILAIVLIAVVLNRVLRSLTRRLVPAAGGEGLGRLARMREQHVKTLAGLLYSAG
Ga0210410_1117156823300021479SoilMGPNVSKWSDFALAHTLRLASIVLIAFVLNRLLRTLMRRLIPAGGTEGLGRIARMREQHVKTLTGLLYSA
Ga0210409_1039618013300021559SoilMTPNVFKWTDFAVAHGIRIAAILLIALILNRLLRSLTRRLIPSAGSDGIGLIARMREDHVKTLASLL
Ga0210409_1091363913300021559SoilMAPNQFPWTEFATHGIRLASILLIAVILNRVLRAATSRLIRLADTETTGRAGRMREQHTKTLAGLLYS
Ga0207699_1038120223300025906Corn, Switchgrass And Miscanthus RhizosphereMNPNVFKWTDIAAARGIRIIAIILIALILNRLLRSVTRRMIPSSGTEGVGRIARMREQHVKTLAGLLYSAGTAVIVVGAILTAL
Ga0207700_1050110713300025928Corn, Switchgrass And Miscanthus RhizosphereMPSNLLRSTDFWLEHSLRLATIVAIALILIRILRTVTNRLIPAAGEGLGRIARMREQHTKTLAG
Ga0207664_1184994623300025929Agricultural SoilMPSNLLRSTDFWLEHSLRLATIVAIALILIRILRTVTNRLIPAAGEGLGRIARMREQHTKTLAGLLYSAGTAVIIVGAILTALPEFGFNITPIAAVAAPAPR
Ga0207665_1022271243300025939Corn, Switchgrass And Miscanthus RhizosphereMPSNLLRSTDFWLEHSLRLATIVAIALILIRILRTVTNRLIPAAGEGLGRIARMREQHTKTLAGLLYSAGTAVIIVGAILTALPEFGFNIT
Ga0207711_1181659723300025941Switchgrass RhizosphereMNPNVFKWTDIAAARGIRIIAIILIALILNRLLRSVTRRMIPSSGTEGVGRIARMREQHV
Ga0209438_105790913300026285Grasslands SoilMVPSVFKWTDLAVGHSLRLASIVLIALILNRLLHMLTRRLLPAAGAEGLGRLARM
Ga0179587_1015460043300026557Vadose Zone SoilMAPTVSKLADFALAHSLRLASIVLIAFILNRLLRTLTRRLIPAGGAEGPGRIARMREQHIKTLAGLLYSAGTA
Ga0179587_1020058633300026557Vadose Zone SoilVHGLRLASIVMIALILIRILGTVTRRLVPAAGEGLGRIARMREQHTKTLAGLLYSAGT
Ga0179587_1031691833300026557Vadose Zone SoilMMPDIFKWTDIAAARGIRLAAILLLALILNRLLRTLTRRLIPASGSEGLGRIARLHEQHVRTLAGLMYSA
Ga0208997_102249423300027181Forest SoilMVPSVFKWTDLAVGHSLRLASIVLIALILNRLLHMLTRRLLPAAGAEGLGRLARMREQHTKTLAGLLYSAGTAVIIIGAILMALPEFGFNITPIAAVA
Ga0208993_104314413300027480Forest SoilMVPSVFKWTDLAVGHSLRLASIVLIALILNRLLHMLTRRLLPAAGAEGLGRLARMREQHTKTLAGLLYSAGTAVIIIGAILMALPEFGFNITPIAA
Ga0209734_106750313300027535Forest SoilMAPNVFKWTDFAIGHTLRLASIVLIALILNRLLRALTRRLIPAAGAEGLGRIARMREQHT
Ga0209419_106250823300027537Forest SoilMGPNVSKWSDFALAHTLRLASIVLIAFVLNRLLRTLMRRLIPAGGTEGLGRIARMREQHVKTLTGLLYSAGTAVIIIGAVLTALPEFGFN
Ga0209219_113268113300027565Forest SoilMTPNVFKWTDIAAARGIRIAAILLIALILNRLLRSLTRRLIPAAGAEGMGRIARMREQHAKTLAGLLYSAGTAVIIVGAILMALPEF
Ga0209733_107752323300027591Forest SoilMTPIVFKWTDIAAAHGIRIVSILVIALILNRILRSLTRRLIPKAGTEGLGRVARMH
Ga0209118_114715513300027674Forest SoilMTPIVFKWTDIAAARGFRIAAIVLIALILNRLLRSLTRRLIPAAGTEGLGRIARMHEQHVKTLAGLLYSAGTAVIVVGAILTALPEFG
Ga0209580_1008429533300027842Surface SoilMTPIVFKWTDIAAAHGVRVIAILVIALILNRILRSLTRRLIPAAGTEGLGR
Ga0209580_1062336613300027842Surface SoilMTPIVFKWTDFAVADGLRLATILVIALVLNRILRVLTRRLIPVAGGEGLGRVARLHEQHVKTLAGLMYSAGTAIIAVGAILT
Ga0209275_1043867923300027884SoilMTPIVFKWTDIAAARGIRLAAILLIALILNRLLRSLTRRLIPATGNEGLGRIARMHEQHVKTLAGLLYSAGTAVIV
Ga0209068_1006276133300027894WatershedsMRIGTIVLIALVLNRILRSVTRRLIPAAGGEGLGRIARMREQHVKTLAGLLYSAG
Ga0209068_1056797123300027894WatershedsMASTIFKTTDFWVGHSLRLASIVLIALILIRILRTLTRRLIPAAGEGFGRIARMREQHAKTLAGLLY
Ga0209415_1060276323300027905Peatlands SoilMTPIVFKWTDIAAAHGVRVIAILVIALILNRILRSLTRRLIPAGGTEGLGRIARMHEQHVKTLAGLIYSAGTAVIVVGAILTAL
Ga0209415_1070056813300027905Peatlands SoilMTPIVFKWTDFAVADGLRLATILVIALVLNRILRVLTRRLIPAAGAEGL
Ga0209006_1050598113300027908Forest SoilMNPNVFKWTDFAAARGIRIAAILLIALILNRLLRSLTHRLIPASGTDGLGRIARMREQHVKTLASLLYSAGTAIIIIGAILTALPEFGF
Ga0209006_1061133313300027908Forest SoilMTPILFKWTDFAAARGIRITAILLIAFILNRLLRTLTRRLVPAAGAEGLGRIARMREQHVKTLSGLLYSAGTAIIIIGAILTALPE
Ga0209698_1025303813300027911WatershedsMTPNVSKWTDFAVAHGVRIAAILLIALILNRLLRSLTRRLIPAAGSEGLGRIARMREQHVKTLAGILY
Ga0209526_1017517943300028047Forest SoilMAPNVFKWTDFAIGHTLRLASIVLIALILNRLLRALTRRLIPAAGAEGLGRIARMREQHTKTLAGLLYSAGTAVIIVGA
Ga0209526_1034447633300028047Forest SoilMPANIFKTTDFWLDHSLRLASILVIALVLIRILRTVTRRLVPAAGEGLGRIARMREQH
Ga0265319_100161013300028563RhizosphereMTLNAFQWTDIALARGLRLLSIVLIAFILNRLLRMVTRRLIPAAGSEGLGRVAKMREQHAKTLAGLLYSAGTAIIIVGAILT
Ga0265338_1080723113300028800RhizosphereMTLNAFQWTDIALARGLRLLSIALIAFILNRLLKTVTRRLIPAAGAEGLGRIAKMREQHAKTLAGLLYSAGTAIII
Ga0222749_1012808923300029636SoilMTPIVFKWTDFAIADGLRLGTILVIALVLNRVLRVLTRRLIPAAGAEGLGRIARMREQHVKTLSGLLYSAGTAIIAVGAILTALPVFGFN
Ga0311338_1147730913300030007PalsaMTPIVFKWTDFAIARGIRIAAILLIALILNRLVRSLTRRLIPAGGAEGLGRIARMREQHVRTLAGLTYSAGTAIIVVGAILTALPEFGFN
Ga0170834_11210314013300031057Forest SoilMNPNVFKWTDIAAARGLRIATIVVIALVLIRLLRSLTRRMIPVAGAEGPGRIARLREQHVKTLAA
Ga0170824_10574998623300031231Forest SoilMARGIRIAAIVLIALILNRLLRMVTRRLIPAPGAENTGRIARMREQHVKTLAGLLYSAGTAIIMVGGILT
Ga0302325_1264910813300031234PalsaMAPNVFKWTDFAVAHGIRVIAILLIALILNRLLRTLTRRLIPAAGSDGLGRIARMREQHVTTLAGLLYSAGTAIIVVGAVLTALP
Ga0302324_10123583323300031236PalsaVLYLPAGIMTPILYKWTDFAAARGIRITAILVIAFVLNRLLRTLTRRLIPAAGAEGLGRIARMREQHVKTL
Ga0265328_1014554213300031239RhizosphereMTLNAFQWTDIALARGLRLLSIVLIAFILNRLLRMVTRRLIPAAGSEGLGRVAKMREQHAKTLAGLLYSAGTAIIIVGAILTALPEFGFYITPIAAVAGLAS
Ga0170818_10973687413300031474Forest SoilMARGIRIAAIVLIALILNRLLRMVTRRLIPAPGAENTGRIARMREQHVKTLAGLLYSAGTAIIMVGGILTALPE
Ga0307373_1029105733300031672SoilMQSPILTRWSEFALAHGARLVGIVVVALILNRLLRSVTRRLVRVAGAEGVGRIARMREQHTRTLAGVVYGAGTAVILALAVLL
Ga0310686_10172349933300031708SoilMTPNVFKWTDFAVARGIRIAAILLIALILNRLLRSLTRRLIPAAGADGLGRIARMREQHVKTLAVLLYSAGTAVIIIGAILTALPEFGFNVTPIAAAAGLASLAVGF
Ga0310686_10213986413300031708SoilMNPNVSRLADFALGHGVRLGAILLIALILNRVLRTLTRRLIPVATAEPVGRIARMREQHVKTMAGIL
Ga0307476_1033822313300031715Hardwood Forest SoilMPTNLFKTTDFWLEHSLRLVSIALIALILIRILRTVTRRLIPAANEGLGRLARMREQHTKTLAGLLYSAGTAVIIVGAIL
Ga0307473_1072901913300031820Hardwood Forest SoilMTPNALKWTDFAATRGVRILAIFLIAFVLNRVLRSLTRRLVPAAGGEGLGRLARLREQHVKTL
Ga0307473_1124402813300031820Hardwood Forest SoilMLGRGLRLTSIVLIAFILNRLLRALTRRLIPAAGAEGLGRIARMREQHAKTLAGL
Ga0307479_1022447243300031962Hardwood Forest SoilMTPNVSKWTEFAVGHGVRLLVILLIALILNRLLRTLTRRLIPAVGTETVGRIARMREQQINTLAGLLYSAGTAVILIGAILTALPELGFSITPFA
Ga0311301_1094738013300032160Peatlands SoilMALNVFKWTDFALGHGVRLVSILLIALILNRLLRTLTRRLIPAGATEGIGRIARMREQQTKTLAGLLYSAGTALIVIGAILTALPEFGFNVTPIAAAAGLA
Ga0307471_10230229323300032180Hardwood Forest SoilMAPNLSKLADFALAHSLRLASIVLIAFVLNRLLRTLTRRLIPSGGAEGLGRIARMREQHAKTLAGLLYSAGTAVIIVGAILMALPEF
Ga0326727_1118546923300033405Peat SoilMYIMAPNVFKWTDFALGHGVRLASILLIALILNRLLRTLTRRLIPAGGTEGTGRVARMREQHTKTVAGLLYSAGTALIIIGAILTALPELGFNVTPIAAAAGLASLAVGF


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.