Metagenome / Metatranscriptome Family F061106

Overview

Basic Information

• Family ID: F061106
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 132
• Average Sequence Length: 53 residues
• Representative Sequence: LDFTAKVPIAGTPTTLVVDRTGHIAGAVFGTVTYPELTAILAKVTAKGG
• Number of Associated Samples: 118
• Number of Associated Scaffolds: 132

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 0.00 %
• % of genes near scaffold ends (potentially truncated): 99.24 %
• % of genes from short scaffolds (< 2000 bps): 97.73 %
• Associated GOLD sequencing projects: 114
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (91.667 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (25.000 % of family members)
• Environment Ontology (ENVO): Unclassified (25.000 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Soil (non-saline) (41.667 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 16.88%
  β-sheet: 23.38%
  Coil/Unstructured: 59.74%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF05140	ResB	96.97
PF03989	DNA_gyraseA_C	0.76
PF01578	Cytochrom_C_asm	0.76
PF13466	STAS_2	0.76

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG1333	Cytochrome c biogenesis protein ResB	Posttranslational modification, protein turnover, chaperones [O]	96.97
COG0188	DNA gyrase/topoisomerase IV, subunit A	Replication, recombination and repair [L]	0.76

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.67 %
Unclassified	root	N/A	8.33 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.67 %
Unclassified	root	N/A	8.33 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.67 %
Unclassified	root	N/A	8.33 %

Level 4

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	91.67 %
Unclassified	root	N/A	8.33 %

Level 5

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	91.67 %
Unclassified	root	N/A	8.33 %

Level 6

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	81.82 %
Unclassified	root	N/A	8.33 %

Level 7

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	9.09 %
Unclassified	root	N/A	8.33 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2.27 %

Level 8

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.09 %
Unclassified	root	N/A	8.33 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2.27 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300001978|JGI24747J21853_1028363	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	632
3300003505|JGIcombinedJ51221_10037044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1803
3300004152|Ga0062386_100974220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	702
3300005169|Ga0066810_10046195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	836
3300005345|Ga0070692_11249726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	531
3300005434|Ga0070709_11323795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	581
3300005435|Ga0070714_102280010	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	527
3300005445|Ga0070708_100758341	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	912
3300005445|Ga0070708_102007943	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	535
3300005537|Ga0070730_10155420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1549
3300005602|Ga0070762_10178290	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1288
3300005712|Ga0070764_10385222	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	826
3300006032|Ga0066696_10345243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	970
3300006175|Ga0070712_101658459	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	559
3300006804|Ga0079221_10378748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	867
3300006804|Ga0079221_11106789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	607
3300009520|Ga0116214_1456733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	500
3300009545|Ga0105237_12454702	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	532
3300010152|Ga0126318_10195484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1045
3300010159|Ga0099796_10525497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	531
3300010376|Ga0126381_104825088	Not Available	518
3300010379|Ga0136449_101609230	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	986
3300010379|Ga0136449_104033368	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	548
3300011080|Ga0138568_1129457	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	500
3300011083|Ga0138560_1169034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	513
3300011120|Ga0150983_11236032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	660
3300011270|Ga0137391_10551060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	971
3300012201|Ga0137365_10181297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1578
3300012201|Ga0137365_10913752	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	640
3300012210|Ga0137378_11285292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	648
3300012353|Ga0137367_10179764	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1537
3300012499|Ga0157350_1024213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	631
3300012918|Ga0137396_10528522	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	874
3300012924|Ga0137413_10609229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	818
3300012984|Ga0164309_10785677	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	765
3300013297|Ga0157378_12936652	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	529
3300015372|Ga0132256_103186231	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	552
3300015374|Ga0132255_104711822	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	578
3300016319|Ga0182033_11401577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	629
3300016341|Ga0182035_11203416	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	677
3300016371|Ga0182034_10500384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1013
3300016445|Ga0182038_10020219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3987
3300017928|Ga0187806_1388928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	502
3300017932|Ga0187814_10262587	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	656
3300017959|Ga0187779_11168991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	540
3300017972|Ga0187781_11146832	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	571
3300017973|Ga0187780_10513845	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	856
3300017973|Ga0187780_11376981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	520
3300018047|Ga0187859_10356315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	798
3300018058|Ga0187766_10199245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1264
3300018058|Ga0187766_10936081	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	613
3300018085|Ga0187772_10090133	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1959
3300019890|Ga0193728_1159944	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	983
3300021171|Ga0210405_11175981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	569
3300021402|Ga0210385_10554877	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	874
3300021403|Ga0210397_10185719	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1477
3300021405|Ga0210387_10748472	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	865
3300021405|Ga0210387_10767803	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	852
3300021406|Ga0210386_10103355	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2338
3300021479|Ga0210410_10824003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	813
3300021560|Ga0126371_11111399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	929
3300021560|Ga0126371_13351820	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	541
3300021861|Ga0213853_10616409	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	627
3300024176|Ga0224565_1041167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	535
3300024225|Ga0224572_1088397	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	572
3300025509|Ga0208848_1098890	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	589
3300025899|Ga0207642_10422377	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	802
3300025916|Ga0207663_10580368	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	879
3300025927|Ga0207687_11375980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	607
3300025986|Ga0207658_10425126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1172
3300026095|Ga0207676_10658579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1011
3300026911|Ga0209620_1008983	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	819
3300027158|Ga0208725_1060432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	561
3300027166|Ga0208729_103268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	876
3300027297|Ga0208241_1003415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1970
3300027725|Ga0209178_1288544	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	601
3300027748|Ga0209689_1289844	Not Available	639
3300027795|Ga0209139_10158488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	801
3300027894|Ga0209068_10724115	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	584
3300028780|Ga0302225_10245386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	855
3300028879|Ga0302229_10286459	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	742
3300030013|Ga0302178_10077019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1759
3300030058|Ga0302179_10191518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	903
3300030494|Ga0310037_10281269	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	713
3300030509|Ga0302183_10237689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	708
3300031028|Ga0302180_10092680	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1741
3300031028|Ga0302180_10169234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1198
3300031057|Ga0170834_108914534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	546
3300031234|Ga0302325_10715945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1437
3300031543|Ga0318516_10511154	Not Available	689
3300031543|Ga0318516_10686883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	581
3300031543|Ga0318516_10774648	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	543
3300031545|Ga0318541_10846635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	510
3300031573|Ga0310915_10367767	Not Available	1020
3300031679|Ga0318561_10666861	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	572
3300031724|Ga0318500_10079289	Not Available	1458
3300031724|Ga0318500_10516233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	601
3300031736|Ga0318501_10385293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	756
3300031751|Ga0318494_10777982	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	561
3300031765|Ga0318554_10699079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	569
3300031771|Ga0318546_11194119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	534
3300031777|Ga0318543_10087135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1328
3300031792|Ga0318529_10344450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	694
3300031793|Ga0318548_10658121	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	508
3300031833|Ga0310917_10252199	Not Available	1188
3300031835|Ga0318517_10087856	Not Available	1353
3300031879|Ga0306919_10942532	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	661
3300031897|Ga0318520_10350455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	896
3300031912|Ga0306921_11118338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	882
3300031946|Ga0310910_10698278	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	802
3300031954|Ga0306926_10976351	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1010
3300032035|Ga0310911_10656267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	608
3300032042|Ga0318545_10232968	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	661
3300032054|Ga0318570_10038487	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1937
3300032055|Ga0318575_10318120	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	788
3300032065|Ga0318513_10073236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1571
3300032067|Ga0318524_10652784	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	554
3300032089|Ga0318525_10082102	Not Available	1630
3300032160|Ga0311301_12680667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	549
3300032180|Ga0307471_103099876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	589
3300032205|Ga0307472_101509128	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	656
3300032770|Ga0335085_11495974	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	703
3300032805|Ga0335078_11802748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	665
3300032805|Ga0335078_12474979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	537
3300032828|Ga0335080_10738785	Not Available	1022
3300032892|Ga0335081_10858146	Not Available	1076
3300032954|Ga0335083_10783446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	766
3300033134|Ga0335073_10972139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	883
3300033807|Ga0314866_052853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	669
3300034163|Ga0370515_0435121	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	553
3300034163|Ga0370515_0516830	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	504

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.42%
Host-Associated	Host-Associated	7.58%

Class

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.36%
Plants	Host-Associated → Plants	7.58%
Aquatic	Environmental → Aquatic	6.06%

Category

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.55%
Peat	Environmental → Terrestrial → Peat	6.06%
Freshwater	Environmental → Aquatic → Freshwater	5.30%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.55%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.03%
Sediment	Environmental → Aquatic → Sediment	0.76%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.76%

Type

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	55.30%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	12.88%
Loam	Environmental → Terrestrial → Soil → Loam	11.36%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	6.06%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.03%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.27%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.52%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.76%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.76%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.76%

Subtype

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	32.58%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.18%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	12.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.06%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	6.06%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.30%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.03%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.27%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.27%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.27%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.52%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.52%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.76%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.76%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.76%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.76%

Habitat

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.00%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.82%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	6.06%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.30%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.30%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.30%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.30%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.55%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.55%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.27%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.27%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.52%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.52%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.52%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.52%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.52%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.76%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.76%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.76%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.76%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.76%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.76%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.76%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.76%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.76%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.76%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.76%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.76%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300001978	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6	Host-Associated
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated
3300010152	Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)	Environmental
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental
3300010379	Sb_50d combined assembly	Environmental
3300011080	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 53 (Metagenome Metatranscriptome) (version 2)	Environmental
3300011083	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 45 (Metagenome Metatranscriptome) (version 2)	Environmental
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental
3300012499	Unplanted soil (control) microbial communities from North Carolina - M.Soil.2.yng.030610	Environmental
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated
3300015372	Soil combined assembly	Host-Associated
3300015374	Col-0 rhizosphere combined assembly	Host-Associated
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental
3300024176	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLU1	Environmental
3300024225	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU5	Host-Associated
3300025509	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 shallow-072012 (SPAdes)	Environmental
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated
3300026911	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_O1 (SPAdes)	Environmental
3300027158	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF011 (SPAdes)	Environmental
3300027166	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF033 (SPAdes)	Environmental
3300027297	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF047 (SPAdes)	Environmental
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental
3300028780	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2	Environmental
3300028879	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3	Environmental
3300030013	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_3	Environmental
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental
3300030509	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_2	Environmental
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental
3300033807	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_100_10	Environmental
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24747J21853_10283632	3300001978	Corn, Switchgrass And Miscanthus Rhizosphere	AITLDFTAKVPIAGTPTTLVVDRTGHIAGAVFGTVTYPGLTAIVAKVTAEGG*
JGIcombinedJ51221_100370442	3300003505	Forest Soil	VITLDFTSVVPIAGTPTTLVIDRTGHIAGAVFGPATQQELTDILVQVMHS*
Ga0062386_1009742202	3300004152	Bog Forest Soil	FTSVVPIAGTPTTLVIDPTGHIAGAVFGSVTYPELTTILTKVTGKAG*
Ga0066810_100461952	3300005169	Soil	AKVPIAGTPTTLVVDRTGHIAGAVFGTVTYSDLTAILAKVTAKGG*
Ga0070692_112497262	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	AYPSVSDQSSAITLDFTAKVPIAGTPTTLVVDRTGHIAGAVFGTVTYPGLTAIVAKVTAEGG*
Ga0070709_113237951	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	LDFTAKVPIAGTPTTLVVDRTGHIAGAVFGTVTYPGLTAILAKVTAEGG*
Ga0070714_1022800101	3300005435	Agricultural Soil	DSGSQITLDFTSVVPIAGTPTTLVVDRTGHIAGAVFGTVNHQELTDILTTVTGKATGGS*
Ga0070708_1007583412	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	FTAKVPIAGTPTTLVVDRTGHIAGAVFGTVTYPGLTAIVAKVTAEGG*
Ga0070708_1020079432	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	PSVSDQSSAITLDFTAKVPIAGTPTTLVVDRTGHIAGAVFGTVTYSDLTAILAKVG*
Ga0070730_101554202	3300005537	Surface Soil	FTSVVPIAGTPTTLVINRAGRIAGAVFGQATMAELTDMLSKVTGQAA*
Ga0070762_101782901	3300005602	Soil	TAVVPVSGTPTTLVIDRTGHIAGAVYGQTTLTELAAMLAKVTGKTVT*
Ga0070764_103852221	3300005712	Soil	STITLDFTSVVPIAGTPTTLVIDRTGHIAGAVFGATTYPELTTILAKVTGKAAHEAVSG*
Ga0066696_103452431	3300006032	Soil	TLDFTAKVPIAGTPTTLVVDRTGHIAGAVFGTVTYPGLIAILAKVTAKGG*
Ga0070712_1016584591	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	LDFTAKVPIAGTPTTLVVDRTGHIAGAVFGTVTYPGLTAIVAKVTAEGG*
Ga0079221_103787482	3300006804	Agricultural Soil	ITADFADVVPIAATPTTLVIDRTGHIAGAVFGAVTYSELSTILTTVTAKGG*
Ga0079221_111067891	3300006804	Agricultural Soil	TLDFTAKVPIAGTPTTLVVDRTGHIAGAVFGTVTYPGLTAILAKVTAEGV*
Ga0116214_14567332	3300009520	Peatlands Soil	VTLDFTAVVPIAGTPTTLVIDRTGHIAGAVFGPATYPELTAILAKVTAKAGS*
Ga0105237_124547022	3300009545	Corn Rhizosphere	TAKVPIAGTPTTLVVDRTGHIAGAVFGTVTYPELTAILAKVTAEGG*
Ga0126318_101954841	3300010152	Soil	SDQSSAITLDFTAKVPIAGTPTTLVVDRTGHIAGAVFGTVTYPGLIAILAKVTAEGG*
Ga0099796_105254971	3300010159	Vadose Zone Soil	SVSDQSSAITLDFTAKVPIAGTPTTLVVDRTGHIAGAVFGTVTYPELIAILAKVTAKGG*
Ga0126381_1048250882	3300010376	Tropical Forest Soil	TLDFTSVVPIAGTPTTLVVDRTGHIAGAVFGTATYQELSDILASVTGKTAG*
Ga0136449_1016092301	3300010379	Peatlands Soil	GSVITLDFTAVVPIAGTPTTLVIDRTGHIAGAVFGPATMGELTAMLAKVTGQAA*
Ga0136449_1040333682	3300010379	Peatlands Soil	FTAVVPLAGTPTTLVIDRTGHIAGAVFESATYPELTAILAKVTAKAGG*
Ga0138568_11294571	3300011080	Peatlands Soil	LDFTAVVPLAGTPTTLVIDRTGHIAGAVFESATYPELTAILAKVTAKAGG*
Ga0138560_11690341	3300011083	Peatlands Soil	EIALDFTAVVPLAGTPTTLVIDRTGHIAGAVFDSATYPELTAVITSVTGKAGG*
Ga0150983_112360321	3300011120	Forest Soil	LDFTSVVPIAGTPTTLVIDRTGHIAGAVFGPATLQELTDILAQVMHS*
Ga0137391_105510602	3300011270	Vadose Zone Soil	DPSQVIALDFSAVVPLAGTPTTLVIDPSGHIAGAVFESATYSELTAILAKVTGKGG*
Ga0137365_101812972	3300012201	Vadose Zone Soil	SAITLDFTAKVPIAGTPTTLVVDRTGHIAGAVFGTVTYPELIAILAKVTAKGG*
Ga0137365_109137522	3300012201	Vadose Zone Soil	SAITLDFTAKVPIAGTPTTLVVDRTGHIAGAVFGTVTYPELTTILARVTAKGG*
Ga0137378_112852922	3300012210	Vadose Zone Soil	FTAKVPIAGTPTTLVVDRTGHIAGAVFGTVTYSELTAILAKVTAKGG*
Ga0137367_101797641	3300012353	Vadose Zone Soil	TAKVPIAGTPTTLVVDRTGHIAGAVFGTVTYPELIAILAKVTAKGG*
Ga0157350_10242131	3300012499	Unplanted Soil	ITLDFTAKVPIAGTPTTLVVDRTGHIAGAVFGTVTYPGLTAIVAKVTAEWG*
Ga0137396_105285222	3300012918	Vadose Zone Soil	FTAKVPIAGTPTTLVVDRTGHIAGAVFGTVTYSELTAILAKVG*
Ga0137413_106092292	3300012924	Vadose Zone Soil	AITLDFTAKVPIAGTPTTLVVDRTGHIAGAVFGTVTYPELTTILARVTAKGG*
Ga0137407_100214171	3300012930	Vadose Zone Soil	KVPIAGTPTTLVVDRTGHIAGAVFGTVTYSDLTAILTKVTAKGG*
Ga0164309_107856772	3300012984	Soil	DFTAKVPIAGTPTTLVVDRTGHIAGAVFGTVTYPGLTAILAKVTAEGG*
Ga0157378_129366522	3300013297	Miscanthus Rhizosphere	LDFTATVPIAGTPTTLVVDRTGHIAGAVFGTVTYPDLTAILAKGTAKGG*
Ga0132256_1031862312	3300015372	Arabidopsis Rhizosphere	DFTAKVPIAGTPTTLVVDRTGHIAGAVFGTVTYPGLTAIVAKVTAEGG*
Ga0132255_1047118221	3300015374	Arabidopsis Rhizosphere	SDQSSAITLEFAAKVPIAATPTTLVVDRTGHIAGAVFGTVTYPDLTAILAKVTARGG*
Ga0182033_114015772	3300016319	Soil	FTSVVPIAGTPTTLVIDRTGHVAGAVFGTATYQELSDILAKVTGKTAG
Ga0182035_112034162	3300016341	Soil	YPSVSDESSAITLDFTAKVPIAGTPTTLVVDRTGHIAGAVFGTVTYSELTAILAKVTAKG
Ga0182034_105003841	3300016371	Soil	TLDFTSVVPIAGTPTTLVVDRTGHIAGAVFGTATYQELTDILAKVTGKTAG
Ga0182038_100202191	3300016445	Soil	DPSSLIALDFTSVVPLAGTPTTLVIDRTGRIAGAVFREATYPELTTILADVTGQTAGGIQGAAASP
Ga0187806_13889281	3300017928	Freshwater Sediment	LTDPSSLIALDFTAAVPLAGTPTTLVIDRTGCIAGAVFEEATYSELTTILADVTGQAAGGIHGAAASP
Ga0187814_102625872	3300017932	Freshwater Sediment	GSQITLDFTSVVPIGGTPTTLVIDRTGHIAGAVFGTATYQELTDILAEVTGKTAGSS
Ga0187779_111689911	3300017959	Tropical Peatland	ITLDFTAVVPIAGTPTTLVIDRTGHIAGAVFGATTYQELTDILAKVTGKTAG
Ga0187781_111468321	3300017972	Tropical Peatland	AVVPIAGTPTTLVIDRTGHVAGAVFGATTYPELTTILANVTKG
Ga0187780_105138452	3300017973	Tropical Peatland	VPIAGTPTTLVIDRAGRIAGAVFERTSYAELNAILTKVTGKAAEDSVSG
Ga0187780_113769812	3300017973	Tropical Peatland	LDFTAVVPIAGTPTTLVIDRTGHVAGAVFGTVTYPELTAILAKVTGKAG
Ga0187859_103563152	3300018047	Peatland	STITLDFTSVVPIAGTPTTLVIDRTGHIAGAVFGSTTYPELTTILAKVTGKAADEAVRG
Ga0187766_101992451	3300018058	Tropical Peatland	ITLGFTAVVPIAGTPTTLVIDRTGRIAGAVFGTATYPELATILAKVTGNTPGGAVTSP
Ga0187766_109360812	3300018058	Tropical Peatland	SVITLDFTAVVPIAGTPTTLVIDRTGHIVGAVFGAATYPELTSILAKVTGKAVGNEDDGSVPSG
Ga0187772_100901332	3300018085	Tropical Peatland	SDPSSLITQDFTAVVPIAGTPTTLVIDRTGHIAGAVFGAATYPELTAILAKVTGKAG
Ga0193728_11599441	3300019890	Soil	SVSDQSSAITLDFTAKVPIAGTPTTLVVDRTGHIAGAVFGTVTYPDLTAILAKVTAKGG
Ga0210405_111759812	3300021171	Soil	SSVITLDFTAVVPIAGTPTTLVIDRTGHVAGAVFGTVTYPELTTILAKVTAKATG
Ga0210385_105548771	3300021402	Soil	DASSAVTLDFSSVVPIAGTPTTLVIDRTGHIAGAIFGSVTYPELGTIVSSVTGKAG
Ga0210397_101857192	3300021403	Soil	FTAVVPIAGTPTTLVIDRTGHVAGAVFGTVTYPELTAILAKATG
Ga0210387_107484721	3300021405	Soil	YPSVSDQSSAITLDFTAKVPIAATPTTLVVDRTGHIAGAVFGAVTYPELTAILAKVV
Ga0210387_107678032	3300021405	Soil	VITLDFTSVVPIAGTPTTLVIDRTGHIAGAVFGTATQQELTDILAQVMHS
Ga0210386_101033551	3300021406	Soil	FTAVVPIAGTPTTLVIDRTGHIAGAVFGTATQQELTDILAQVMHS
Ga0210410_108240032	3300021479	Soil	VSDQSSAITLDFTAKVPIAATPTTLVVDRTGHIAGAVFGAVTYPELTAILAKVA
Ga0126371_111113992	3300021560	Tropical Forest Soil	SAITLDFTAKVPIAGTPTTLVVDRTGHIAGAIFGTVTYSELTAILAKVTAKGG
Ga0126371_133518202	3300021560	Tropical Forest Soil	SYPSVSDPSSAITLDFTAKVPIAGTPTTLVVDRTGHIAGAVFGTVTYSDLTAILAKVTAKGG
Ga0213853_106164092	3300021861	Watersheds	DPSQEIALDCTAVVPLEGTPTTLVIDRTGHIAGAVFGTATYPELSAILAKVTTKAGTS
Ga0224565_10411671	3300024176	Plant Litter	DFTAVVPIAGTPTTLVIDRTGHIAGAVFGTATYPELTEILAKVTGKAGG
Ga0224572_10883971	3300024225	Rhizosphere	SQEIALDFTAVVPLEGTPTTLVIDRTGHIAGAVFGTATYPELTAILAKVTTKAGG
Ga0208848_10988901	3300025509	Arctic Peat Soil	TAVVPIAGTPTTLVIDRTGRIAGAVFGTATYSELTAILAKVAAKGG
Ga0207642_104223771	3300025899	Miscanthus Rhizosphere	AITLDFTAKVPIAGTPTTLVVDRTGHIAGAVFGTVTYPGLTAIVAKVTAEGG
Ga0207663_105803681	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	YPSVSDPGSMITQDFTARVPIAGTPTTLVVDRTGHIAGAIFGTVTYSGLTALLARVR
Ga0207687_113759802	3300025927	Miscanthus Rhizosphere	VTLDFTAKVPIAGTPTTLVVDRTGHIAGAVFGTVTYPGLTAILAKVTAEGG
Ga0207658_104251262	3300025986	Switchgrass Rhizosphere	SAITLDFTAKVPIAGTPTTLVVDRTGHIAGAVFGTVTYPGLTAIVAKVTAEGG
Ga0207676_106585791	3300026095	Switchgrass Rhizosphere	VITADFADVVPIAATPTTLVIDRTGHIAGAVFGAVTYSELSTILTTVTAKGG
Ga0209620_10089832	3300026911	Forest Soil	ITLDFTAKVPIAGTPTTLVVDRTGHIAGAVFGTVTYPGLTAILAKVTAEGG
Ga0208725_10604322	3300027158	Forest Soil	ITLAFTAAVPVSGTPTTLVVDRTGHIAGAVFGQATYSELTAMLAKVTGKTAG
Ga0208729_1032683	3300027166	Forest Soil	FTAVVPIAGTPTTLVIDRTGHIAGAVFGTATQQELADILAQVLAALAVS
Ga0208241_10034151	3300027297	Forest Soil	SQITLDFTAVVPIAGTPTTLVIDRTGHIAGAVFGTATSQELTDILAQVTGKTAG
Ga0209178_12885441	3300027725	Agricultural Soil	SDQSSAITLDFTAKVPIAGTPTTLVVDRTGHIAGAVFGTVTYPGLTAILAKVTAEGV
Ga0209689_12898443	3300027748	Soil	DFTAKVPIAGTPTTLVIDRTGRIAGAVFGRATYTELNTILAKVTGKPAG
Ga0209139_101584881	3300027795	Bog Forest Soil	GSVITLDFTSVVPIAGTPTTLVIDRTGHIAGAVFGTATQQELTDILAQVMHS
Ga0209068_107241152	3300027894	Watersheds	QEIALDFTAVVPLEGTPTTLVIDRTGHIAGAVFGTATYPELSAILAKVTTKAGIS
Ga0302225_102453861	3300028780	Palsa	SVITLDFTAVVPIAGTPTTLVIDRTGHIAGAVFGTATSQELTDILAQVTGKTAGAVTS
Ga0302229_102864592	3300028879	Palsa	PSSAITLDFTSVVPIAGTPTTLVIDRTGHIAGAVFGSTTYPELTTILAKVTGKAADEAVG
Ga0302178_100770192	3300030013	Palsa	DFTSVVPIAGTPTTLVIDKTGHIAGAVFGTVTYSELTTILTKVTGNAG
Ga0302179_101915182	3300030058	Palsa	AITLDFTSVVPIAGTPTTLVIDRTGHIAGAVFGSTTYPELTTILAKVSGKAADEAVSR
Ga0310037_102812692	3300030494	Peatlands Soil	LAFTAVVPIAGTPTTLVIDRTGHIAGAVFGTATYPELTAILAKVTGKAGG
Ga0302183_102376892	3300030509	Palsa	ITLDFTSVVPIAGTPTTLVIDRTGHIAGAVFGSTTYPELTAILAKVTGKAADEAVSR
Ga0302180_100926802	3300031028	Palsa	FTSVVPIAGTPTTLVIDRTGHIAGAVFGSTTYPELTTILAKVTGKAADEAVSR
Ga0302180_101692342	3300031028	Palsa	ITLDFTSAVPIAGTPTTLVIDRTGHIAGAVFGSTTYPELTTILAKVTGKAADEAVSR
Ga0170834_1089145342	3300031057	Forest Soil	AKVPIAGTPTTLVIDRTGHIAGAVFGTATYPELSAILAKVTTKAGTS
Ga0302325_107159451	3300031234	Palsa	LAFTAAVPVSGTPTTLVVDRTGHIAGAVFGQATYSELTAMLAKVTGKTAG
Ga0318516_105111541	3300031543	Soil	PIAGTPTTLVVDRTGHIAGAVFGTATYPELSTILAKVTGTTAGGTVTSP
Ga0318516_106868832	3300031543	Soil	PSVNDAGSVITLDFTSVVPIAGTPTTLVVDRTGHIAGAVFGTATYQELSDILTQVTGKTA
Ga0318516_107746482	3300031543	Soil	LDFTAKVPIAGTPTTLVVDRTGHIAGAVFGTVTYPELTAILAKVTAKGG
Ga0318541_108466352	3300031545	Soil	SYPSVNDAGSVITLDFTSVVPIAGTPTTLVVDRTGHIAGAVFGTATYQELSDILTQVTGKTAG
Ga0310915_103677672	3300031573	Soil	ESSAITLDFTAKVPIAGTPTTLVVDRTGHIAGAVFGTVTYSELTAILAKVTAKGG
Ga0318561_106668612	3300031679	Soil	ISSVITLDFTTVVPIAGTPTTLVIDPSGHIAGAVFGTATYPELATILAKVTGKTAGGIQEAVTSP
Ga0318500_100792891	3300031724	Soil	VITLDFTSVVPIAGTPTTLVVDRTGHIAGAVFGTATYQELSDILTQVTGKTAG
Ga0318500_105162331	3300031724	Soil	SLITQDFTAVVPIAGTPTTLVIDRTGHVAGAVFGTATYPELTAILAKVTAKAG
Ga0318501_103852931	3300031736	Soil	SDPSSAITLDFTAKVPIAGTPTTLVVDRTGHIAGAVFGTVTYPELTAILAKVTAKGG
Ga0318494_107779821	3300031751	Soil	FTATVPIAGTPTTLVIDRTGHVAGAVFGAVTYPELTAILTRVTATATG
Ga0318554_106990792	3300031765	Soil	PSVSDPGSAITLDFTAKVPIAGTPTTLVVDRTGHIAGAVFGTVTYSDLTAILAKVTAKGG
Ga0318546_111941191	3300031771	Soil	TLDFTAVVPIAGTPTTLVIDRTGHVAGAVFGTVTYPELTAILATVTGKVVSR
Ga0318543_100871352	3300031777	Soil	SVVPIAGTPTTLVVDRTGHIAGAVFGTATYQELSDILTQVTGKTAG
Ga0318529_103444501	3300031792	Soil	PSSLIALDFTSVVPLAGTPTTLVIDRTGRIAGAVFREATYPELTTILADVTGQTAGGIQGAAASP
Ga0318548_106581211	3300031793	Soil	QDFTAVVPIAGTPTTLVIDRTGHVAGAVFGTATYPELTAILAKVTAKAG
Ga0310917_102521992	3300031833	Soil	TSVVPIAGTPTTLVIDRTGHIAGAVFGTATHQELADILGEVAGKAAGGS
Ga0318517_100878562	3300031835	Soil	ITLAFTAKVPIAGTPTTLVVDRTGHIAGAVFGTVTYPELTAILAKVTAKGG
Ga0306919_109425321	3300031879	Soil	VSDESSAITLDFTAKVPIAGTPTTLVVDRTGHIAGAVFGTVTYSELTAILAKVTAKGG
Ga0318520_103504551	3300031897	Soil	SDPSSAITLDFTAKVPIAGTPTTLVVDRTGHIAGAVFGTVTYSELTAILAKVR
Ga0306921_111183381	3300031912	Soil	GSVVTLDFTSVVPIAGTPTTLVVDRTGHIAGAVFGTATYQELTDILAKVTGKTTG
Ga0310910_106982782	3300031946	Soil	VSDPASAITLAFTAKVPIAGTPTTLVVDRTGHIAGAVFGTVTYPELTSILAKVTAKGG
Ga0306926_109763511	3300031954	Soil	DASSVITQDFTSAVPIAGTPTTLVIDRTGHIAGAVFGTATYQELTDILAKVTGKTAG
Ga0310911_106562672	3300032035	Soil	LAFTAKVPIAGTPTTLVVDRTGHIAGAVFGTVTYSELTAILAKVTAKGG
Ga0318545_102329682	3300032042	Soil	DFTSVVPIAGTPTTLVVDRTGHIAGAVFGTATYQELSDILTQVTGKTAG
Ga0318570_100384872	3300032054	Soil	ISYPSVNDAGSVITLDFTSVVPIAGTPTTLVVDRTGHIAGAVFGTATYQELSDILTQVTGKTAG
Ga0318575_103181202	3300032055	Soil	PRSAITLDFTAKVPIAGTPTTLVVDRTGHIAGAVFGTVTYAELTAILAKVR
Ga0318513_100732361	3300032065	Soil	PSSLIALDFTSVVPLAGTPTTLVIDRTGRIAGAVFREATYPELTTILADVTGPTAGGIQGAAASP
Ga0318524_106527842	3300032067	Soil	DFTSAVPIAGTPTTLVIDRTGHIAGAVFGTATYQELTDILAKVTGKTAG
Ga0318525_100821022	3300032089	Soil	DFTAKVPIAGTPTTLVVDRTGHIAGAVFGTVTYSELTAILAKVR
Ga0311301_126806672	3300032160	Peatlands Soil	DFTAVVPLAGTPTTLVIDRTGHIAGAVFESATYPELTAILAKVTAKAGG
Ga0307471_1030998762	3300032180	Hardwood Forest Soil	FTAKVPIAATPTTLVVDRTGHIAGAVFGAVTYPELTAILAKVV
Ga0307472_1015091281	3300032205	Hardwood Forest Soil	SAVTLDFTAKVPIAGTPTTLVVDRTGHIAGAVFGTVTYPGLTAIVAKVTAEGG
Ga0335085_114959742	3300032770	Soil	PSSAITLDFTAKVPIAGTPTTLVVDRTGHIAGAVFGTVTYSELTAILAKVTAEGG
Ga0335078_118027482	3300032805	Soil	SAITLDFTAKVPIAGTPTTLVVDRTGHIAGAVFGTVTYSDLTAILAKVTAKGG
Ga0335078_124749792	3300032805	Soil	ITLDFTAVVPIAGTPTTLVIDRTGHVAGAVFGTVTYPELTAILAKVTGKAVVSG
Ga0335080_107387852	3300032828	Soil	TAKVPIAGTPTTLVVDRTGHIAGAVFGTVTYSDLTAILAKVTAKGG
Ga0335081_108581462	3300032892	Soil	HVSYPSVSDPSSAITLDFTAKVPIAGTPTTLVVDRTGHIAGAIFGTVTYSDLTAILAKVTAKGG
Ga0335083_107834461	3300032954	Soil	DPGSVITLGFTAKVPIAGTPTTLVIDRTGHIAGAVFGTVTYSELTAILAKVR
Ga0335073_109721392	3300033134	Soil	YPSVSDPSSAITLDFTAKVPIAGTPTTLVVDRTGHIAGAVFGTVTYSDLTAILAKVTAKG
Ga0314866_052853_514_669	3300033807	Peatland	TQDFTAAVPIAGTPTTLVIDRTGHVAGAVFGAVTYPELTAILAKVTATATG
Ga0370515_0435121_385_552	3300034163	Untreated Peat Soil	TLDFTAVVPIAGTPTTLVIDRTGHIAGAVFGTATSQELTDILAQVTGKTAGAVTS
Ga0370515_0516830_2_151	3300034163	Untreated Peat Soil	VAIAATPTTLVIDRTGHIAGAVFGATSYPVLTTILAKVTGKMAAEVVSR