Metagenome Family F061069

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F061069
Family Type	Metagenome
Number of Sequences	132
Average Sequence Length	82 residues
Representative Sequence	MNARTPEPGSPIPSAPFDDLDLEKPEDEAEWDRRVMALAAERIAAERVRLERLGIIDADGELISRALPPDMLPESDTTLETG
Number of Associated Samples	112
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	40.91 %
% of genes near scaffold ends (potentially truncated)	33.33 %
% of genes from short scaffolds (< 2000 bps)	76.52 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.59

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (65.152 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen (16.667 % of family members)
Environment Ontology (ENVO)	Unclassified (25.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.758 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 28.18% β-sheet: 1.82% Coil/Unstructured: 70.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.59
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.59
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF06414	Zeta_toxin	15.15
PF02810	SEC-C	3.79
PF00440	TetR_N	2.27
PF04255	DUF433	1.52
PF00078	RVT_1	1.52
PF12728	HTH_17	1.52
PF04250	DUF429	1.52
PF01161	PBP	0.76
PF13817	DDE_Tnp_IS66_C	0.76
PF00004	AAA	0.76
PF00037	Fer4	0.76
PF00999	Na_H_Exchanger	0.76
PF01872	RibD_C	0.76
PF13417	GST_N_3	0.76
PF10087	DUF2325	0.76
PF04185	Phosphoesterase	0.76
PF05685	Uma2	0.76
PF06041	DUF924	0.76
PF02798	GST_N	0.76
PF00589	Phage_integrase	0.76
PF03176	MMPL	0.76
PF02368	Big_2	0.76
PF00271	Helicase_C	0.76
PF04434	SWIM	0.76
PF09907	HigB_toxin	0.76
PF13948	DUF4215	0.76
PF04365	BrnT_toxin	0.76
PF14234	DUF4336	0.76

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG2410	Predicted nuclease (RNAse H fold)	General function prediction only [R]	1.52
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	1.52
COG2929	Ribonuclease BrnT, toxin component of the BrnT-BrnA toxin-antitoxin system	Defense mechanisms [V]	0.76
COG5431	Predicted nucleic acid-binding protein, contains SWIM-type Zn-finger domain	General function prediction only [R]	0.76
COG4715	Uncharacterized protein, contains SWIM-type Zn finger domain	Function unknown [S]	0.76
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	0.76
COG4636	Endonuclease, Uma2 family (restriction endonuclease fold)	General function prediction only [R]	0.76
COG4279	Uncharacterized protein, contains SWIM-type Zn finger domain	Function unknown [S]	0.76
COG3803	Uncharacterized conserved protein, DUF924 family	Function unknown [S]	0.76
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.76
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	0.76
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	0.76
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	0.76
COG2409	Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily	General function prediction only [R]	0.76
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.76
COG1881	Uncharacterized conserved protein, phosphatidylethanolamine-binding protein (PEBP) family	General function prediction only [R]	0.76
COG1033	Predicted exporter protein, RND superfamily	General function prediction only [R]	0.76
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	0.76
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	65.15 %
Unclassified	root	N/A	34.85 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	65.15 %
Unclassified	root	N/A	34.85 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	65.15 %
Unclassified	root	N/A	34.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	18.18 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.27 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.85 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	12.12 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.52 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.76 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.76 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.85 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	12.12 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.52 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	0.76 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.76 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.76 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.76 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.85 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	11.36 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.52 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.76 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.76 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.76 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.76 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.85 %
unclassified Myxococcales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales	1.52 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	1.52 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.52 %
Nannocystineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae	0.76 %
Myxococcales incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Myxococcales incertae sedis	0.76 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	0.76 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.76 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.76 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.76 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.76 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.85 %
Myxococcales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	1.52 %
Polyangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	1.52 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.52 %
Bradyrhizobium septentrionale	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium septentrionale	0.76 %
Nannocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Nannocystaceae	0.76 %
Enhygromyxa	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Myxococcales incertae sedis → Enhygromyxa	0.76 %
Archangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	0.76 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.76 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.76 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.76 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.85 %
Sorangium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium	1.52 %
Myxococcales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	1.52 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.52 %
Enhygromyxa salina	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Myxococcales incertae sedis → Enhygromyxa → Enhygromyxa salina	0.76 %
Nannocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Nannocystaceae → Nannocystis	0.76 %
Bradyrhizobium septentrionale	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium septentrionale	0.76 %
Archangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	0.76 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.76 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.76 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.76 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.85 %
Sorangium cellulosum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	1.52 %
Myxococcales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	1.52 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.52 %
Enhygromyxa salina	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Myxococcales incertae sedis → Enhygromyxa → Enhygromyxa salina	0.76 %
Nannocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Nannocystaceae → Nannocystis	0.76 %
Bradyrhizobium septentrionale	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium septentrionale	0.76 %
Archangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	0.76 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.76 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.76 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.76 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003320\|rootH2_10062687	All Organisms → cellular organisms → Bacteria	7371	Open in IMG/M
3300003323\|rootH1_10152312	All Organisms → cellular organisms → Bacteria	3359	Open in IMG/M
3300003323\|rootH1_10257575	All Organisms → cellular organisms → Bacteria → Proteobacteria	2700	Open in IMG/M
3300004156\|Ga0062589_102387461	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300005093\|Ga0062594_101926234	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300005280\|Ga0065696_1347450	Not Available	526	Open in IMG/M
3300005451\|Ga0066681_10521852	Not Available	733	Open in IMG/M
3300005543\|Ga0070672_100212903	All Organisms → cellular organisms → Bacteria	1619	Open in IMG/M
3300005563\|Ga0068855_100000223	All Organisms → cellular organisms → Bacteria	72505	Open in IMG/M
3300005563\|Ga0068855_100000635	All Organisms → cellular organisms → Bacteria → Proteobacteria	42922	Open in IMG/M
3300005577\|Ga0068857_101172541	Not Available	743	Open in IMG/M
3300005618\|Ga0068864_101817324	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300005829\|Ga0074479_10547529	All Organisms → cellular organisms → Bacteria → Proteobacteria	1042	Open in IMG/M
3300005836\|Ga0074470_10109665	All Organisms → cellular organisms → Bacteria	3593	Open in IMG/M
3300005836\|Ga0074470_10762052	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300005944\|Ga0066788_10030717	All Organisms → cellular organisms → Bacteria	1223	Open in IMG/M
3300005944\|Ga0066788_10084664	Not Available	775	Open in IMG/M
3300005993\|Ga0080027_10008547	All Organisms → cellular organisms → Bacteria	3719	Open in IMG/M
3300005993\|Ga0080027_10010595	All Organisms → cellular organisms → Bacteria	3305	Open in IMG/M
3300006176\|Ga0070765_101349975	Not Available	672	Open in IMG/M
3300006755\|Ga0079222_12498887	Not Available	519	Open in IMG/M
3300006854\|Ga0075425_102724361	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300007521\|Ga0105044_10919582	Not Available	678	Open in IMG/M
3300009012\|Ga0066710_104235653	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300009032\|Ga0105048_10828954	Not Available	826	Open in IMG/M
3300009087\|Ga0105107_10305315	Not Available	1109	Open in IMG/M
3300009093\|Ga0105240_10250372	All Organisms → cellular organisms → Bacteria → Proteobacteria	2049	Open in IMG/M
3300009128\|Ga0118727_1229993	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1181	Open in IMG/M
3300009715\|Ga0116160_1251327	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300010379\|Ga0136449_101878058	Not Available	891	Open in IMG/M
3300011415\|Ga0137325_1009604	All Organisms → cellular organisms → Bacteria	1896	Open in IMG/M
3300011439\|Ga0137432_1171308	Not Available	700	Open in IMG/M
3300012212\|Ga0150985_106329922	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300012212\|Ga0150985_112995215	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300012232\|Ga0137435_1143533	Not Available	728	Open in IMG/M
3300012469\|Ga0150984_113633715	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300012469\|Ga0150984_121804219	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300012469\|Ga0150984_123154069	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300012891\|Ga0157305_10004680	Not Available	1881	Open in IMG/M
3300012892\|Ga0157294_10040012	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300012902\|Ga0157291_10005248	All Organisms → cellular organisms → Bacteria	2004	Open in IMG/M
3300012903\|Ga0157289_10034448	All Organisms → cellular organisms → Bacteria	1203	Open in IMG/M
3300012944\|Ga0137410_10325084	Not Available	1223	Open in IMG/M
3300012984\|Ga0164309_10000052	All Organisms → cellular organisms → Bacteria	61634	Open in IMG/M
3300012985\|Ga0164308_10009329	All Organisms → cellular organisms → Bacteria	5294	Open in IMG/M
3300012988\|Ga0164306_10158637	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1550	Open in IMG/M
3300013772\|Ga0120158_10196239	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	1060	Open in IMG/M
3300014200\|Ga0181526_10395577	All Organisms → cellular organisms → Bacteria	877	Open in IMG/M
3300014303\|Ga0075358_1084464	Not Available	600	Open in IMG/M
3300014489\|Ga0182018_10632550	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300014492\|Ga0182013_10451958	Not Available	678	Open in IMG/M
3300014498\|Ga0182019_10010532	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	4866	Open in IMG/M
3300014499\|Ga0182012_10889130	Not Available	562	Open in IMG/M
3300014658\|Ga0181519_10120195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium septentrionale	1688	Open in IMG/M
3300014969\|Ga0157376_10503333	Not Available	1191	Open in IMG/M
3300015245\|Ga0137409_10663151	Not Available	876	Open in IMG/M
3300015360\|Ga0163144_10271181	All Organisms → cellular organisms → Bacteria	2211	Open in IMG/M
3300017975\|Ga0187782_10016980	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	5309	Open in IMG/M
3300018033\|Ga0187867_10509715	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300018085\|Ga0187772_10513670	Not Available	846	Open in IMG/M
3300020057\|Ga0163151_10167954	Not Available	1326	Open in IMG/M
3300020186\|Ga0163153_10024963	Not Available	4710	Open in IMG/M
3300020192\|Ga0163147_10050790	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Nannocystaceae → Nannocystis	3146	Open in IMG/M
3300020201\|Ga0163154_10229626	Not Available	946	Open in IMG/M
3300020213\|Ga0163152_10131459	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Myxococcales incertae sedis → Enhygromyxa → Enhygromyxa salina	1480	Open in IMG/M
3300021082\|Ga0210380_10456529	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300021402\|Ga0210385_10560642	All Organisms → cellular organisms → Bacteria	869	Open in IMG/M
3300021405\|Ga0210387_10052518	All Organisms → cellular organisms → Bacteria	3286	Open in IMG/M
3300021478\|Ga0210402_10408722	Not Available	1260	Open in IMG/M
3300022896\|Ga0247781_1107998	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300022906\|Ga0247766_1016015	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1749	Open in IMG/M
3300022910\|Ga0247768_1018077	All Organisms → cellular organisms → Bacteria	2286	Open in IMG/M
3300022917\|Ga0247777_1086324	All Organisms → cellular organisms → Bacteria	1068	Open in IMG/M
3300023261\|Ga0247796_1046334	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300023264\|Ga0247772_1000061	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	57337	Open in IMG/M
3300023265\|Ga0247780_1052334	All Organisms → cellular organisms → Bacteria	1026	Open in IMG/M
3300024232\|Ga0247664_1051523	Not Available	952	Open in IMG/M
3300025627\|Ga0208220_1140346	Not Available	622	Open in IMG/M
3300025633\|Ga0208480_1034017	All Organisms → cellular organisms → Bacteria	1415	Open in IMG/M
3300025913\|Ga0207695_10618391	All Organisms → cellular organisms → Bacteria	964	Open in IMG/M
3300025940\|Ga0207691_10266548	All Organisms → cellular organisms → Bacteria	1476	Open in IMG/M
3300025949\|Ga0207667_10002027	All Organisms → cellular organisms → Bacteria → Proteobacteria	25396	Open in IMG/M
3300025949\|Ga0207667_10004419	All Organisms → cellular organisms → Bacteria	17209	Open in IMG/M
3300026116\|Ga0207674_11218954	Not Available	722	Open in IMG/M
3300026215\|Ga0209849_1025743	Not Available	1004	Open in IMG/M
3300026281\|Ga0209863_10006636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3830	Open in IMG/M
3300026281\|Ga0209863_10028363	All Organisms → cellular organisms → Bacteria	1701	Open in IMG/M
3300027823\|Ga0209490_10137151	All Organisms → cellular organisms → Bacteria	1717	Open in IMG/M
3300027905\|Ga0209415_10090295	All Organisms → cellular organisms → Bacteria	3441	Open in IMG/M
3300027905\|Ga0209415_10524922	Not Available	903	Open in IMG/M
3300027905\|Ga0209415_10616661	Not Available	799	Open in IMG/M
3300028573\|Ga0265334_10004804	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	5939	Open in IMG/M
3300028652\|Ga0302166_10026231	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1158	Open in IMG/M
3300028739\|Ga0302205_10194359	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	520	Open in IMG/M
3300028783\|Ga0302279_10103739	Not Available	1502	Open in IMG/M
3300028802\|Ga0307503_10454642	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	681	Open in IMG/M
3300028869\|Ga0302263_10108163	Not Available	1105	Open in IMG/M
3300029911\|Ga0311361_10425307	Not Available	1376	Open in IMG/M
3300029923\|Ga0311347_10406834	Not Available	828	Open in IMG/M
3300029980\|Ga0302298_10030524	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1548	Open in IMG/M
3300029987\|Ga0311334_10139708	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1818	Open in IMG/M
3300029987\|Ga0311334_10831147	Not Available	761	Open in IMG/M
3300029987\|Ga0311334_11828307	Not Available	518	Open in IMG/M
3300029989\|Ga0311365_11251671	Not Available	639	Open in IMG/M
3300029989\|Ga0311365_11858497	Not Available	515	Open in IMG/M
3300029990\|Ga0311336_10078063	Not Available	2597	Open in IMG/M
3300030000\|Ga0311337_10260539	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1440	Open in IMG/M
3300030000\|Ga0311337_10352824	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	1238	Open in IMG/M
3300030002\|Ga0311350_10176901	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	1895	Open in IMG/M
3300030003\|Ga0302172_10184804	Not Available	654	Open in IMG/M
3300030114\|Ga0311333_10400697	All Organisms → cellular organisms → Bacteria	1110	Open in IMG/M
3300030294\|Ga0311349_10232876	All Organisms → cellular organisms → Bacteria → Proteobacteria	1736	Open in IMG/M
3300030294\|Ga0311349_11040024	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300030294\|Ga0311349_11423202	Not Available	644	Open in IMG/M
3300030520\|Ga0311372_10618709	All Organisms → cellular organisms → Bacteria	1541	Open in IMG/M
3300031231\|Ga0170824_128327501	All Organisms → cellular organisms → Bacteria	1071	Open in IMG/M
3300031232\|Ga0302323_100669793	All Organisms → cellular organisms → Bacteria	1131	Open in IMG/M
3300031232\|Ga0302323_101125082	Not Available	876	Open in IMG/M
3300031249\|Ga0265339_10162209	Not Available	1124	Open in IMG/M
3300031446\|Ga0170820_17098877	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300031456\|Ga0307513_10136415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2389	Open in IMG/M
3300031456\|Ga0307513_10417736	All Organisms → cellular organisms → Bacteria	1072	Open in IMG/M
3300031524\|Ga0302320_12019645	Not Available	540	Open in IMG/M
3300031726\|Ga0302321_100607914	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	1218	Open in IMG/M
3300031938\|Ga0308175_100296975	All Organisms → cellular organisms → Bacteria	1645	Open in IMG/M
3300032157\|Ga0315912_10008761	All Organisms → cellular organisms → Bacteria	8749	Open in IMG/M
3300032261\|Ga0306920_102238425	Not Available	759	Open in IMG/M
3300033402\|Ga0326728_10045958	All Organisms → cellular organisms → Bacteria	6579	Open in IMG/M
3300033407\|Ga0214472_10772248	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	867	Open in IMG/M
3300033513\|Ga0316628_100036870	All Organisms → cellular organisms → Bacteria	4890	Open in IMG/M
3300033983\|Ga0371488_0002747	All Organisms → cellular organisms → Bacteria	18927	Open in IMG/M
3300034163\|Ga0370515_0073500	Not Available	1488	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	79.55%
Host-Associated	Host-Associated	19.70%
Engineered	Engineered	0.76%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	63.64%
Plants	Host-Associated → Plants	19.70%
Aquatic	Environmental → Aquatic	15.91%
Wastewater	Engineered → Wastewater	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	37.88%
Peat	Environmental → Terrestrial → Peat	21.21%
Freshwater	Environmental → Aquatic → Freshwater	10.61%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.33%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.58%
Sediment	Environmental → Aquatic → Sediment	4.55%
Plant Litter	Environmental → Terrestrial → Plant Litter	4.55%
Rhizome	Host-Associated → Plants → Rhizome	2.27%
Roots	Host-Associated → Plants → Roots	1.52%
Marine	Environmental → Aquatic → Marine	0.76%
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	25.00%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	21.21%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	12.12%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.30%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.30%
Lake	Environmental → Aquatic → Freshwater → Lake	4.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.55%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	4.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.03%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.27%
Ice	Environmental → Aquatic → Freshwater → Ice	2.27%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.27%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified	2.27%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.52%
Unclassified	Host-Associated → Plants → Roots → Unclassified	1.52%
Coastal	Environmental → Aquatic → Marine → Coastal	0.76%
Loam	Environmental → Terrestrial → Soil → Loam	0.76%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	21.21%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.36%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	8.33%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.30%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.30%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.30%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	4.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.55%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	4.55%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.79%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.03%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.27%
Glacial Lake	Environmental → Aquatic → Freshwater → Ice → Glacial Lake	2.27%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.27%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.27%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified → Unclassified	2.27%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.52%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.52%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	1.52%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.76%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.76%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.76%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	16.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.82%
Freshwater Microbial Mat	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat	4.55%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	4.55%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.55%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.03%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	3.03%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater	2.27%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.27%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	2.27%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	2.27%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	2.27%
Sugarcane Root And Bulk Soil	Host-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil	2.27%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	2.27%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.52%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.52%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.52%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.52%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.52%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	1.52%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.52%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.52%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	1.52%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.52%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.52%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.52%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.76%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.76%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.76%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.76%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.76%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.76%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.76%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.76%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.76%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.76%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.76%
Switchgrass Rhizosphere Bulk Soil	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere Bulk Soil	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.76%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003320	Sugarcane root Sample H2	Host-Associated	Open in IMG/M
3300003323	Sugarcane root Sample H1	Host-Associated	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005280	Switchgrass rhizosphere microbial community from Michigan, USA - East Lansing bulk soil	Host-Associated	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005829	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.190_CBC	Environmental	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300005944	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048	Environmental	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007521	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-01	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009032	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-05	Environmental	Open in IMG/M
3300009087	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009128	Combined Assembly of Gp0137084, Gp0137083	Environmental	Open in IMG/M
3300009715	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNAS2_MetaG	Engineered	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011415	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT469_2	Environmental	Open in IMG/M
3300011439	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT820_2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012232	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT100_2	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012891	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2	Environmental	Open in IMG/M
3300012892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1	Environmental	Open in IMG/M
3300012902	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1	Environmental	Open in IMG/M
3300012903	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014303	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_TuleA_D1	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014499	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaG	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015360	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.BULKMAT1	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020057	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP5.IB-2	Environmental	Open in IMG/M
3300020186	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP6.IB-1	Environmental	Open in IMG/M
3300020192	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica- Oligotrophic Lake LV.19.MP6.G1	Environmental	Open in IMG/M
3300020201	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP9.P1	Environmental	Open in IMG/M
3300020213	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP8.IB-2	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022896	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L184-509B-5	Environmental	Open in IMG/M
3300022906	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L223-509R-6	Environmental	Open in IMG/M
3300022910	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L016-104C-6	Environmental	Open in IMG/M
3300022917	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L154-409C-5	Environmental	Open in IMG/M
3300023261	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S166-409R-6	Environmental	Open in IMG/M
3300023264	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L151-409C-6	Environmental	Open in IMG/M
3300023265	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L079-202R-5	Environmental	Open in IMG/M
3300024232	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK05	Environmental	Open in IMG/M
3300025627	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025633	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026215	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048 (SPAdes)	Environmental	Open in IMG/M
3300026281	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046 (SPAdes)	Environmental	Open in IMG/M
3300027823	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-06 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300028573	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG	Host-Associated	Open in IMG/M
3300028652	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E3_3	Environmental	Open in IMG/M
3300028739	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_E1_3	Environmental	Open in IMG/M
3300028783	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_3	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028869	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_N1_4	Environmental	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029923	II_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029980	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N3_3	Environmental	Open in IMG/M
3300029987	I_Fen_E3 coassembly	Environmental	Open in IMG/M
3300029989	III_Fen_N1 coassembly	Environmental	Open in IMG/M
3300029990	I_Fen_N2 coassembly	Environmental	Open in IMG/M
3300030000	I_Fen_N3 coassembly	Environmental	Open in IMG/M
3300030002	II_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030003	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N2_3	Environmental	Open in IMG/M
3300030114	I_Fen_E2 coassembly	Environmental	Open in IMG/M
3300030294	II_Fen_E3 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031249	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG	Host-Associated	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031456	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM	Host-Associated	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033983	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB23AN SIP fraction	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
rootH2_100626871	3300003320	Sugarcane Root And Bulk Soil	TTMNARTPEPGSIPSAPFEDLDLDRPEDEAEWDRRVMALAAERIAAERVRLERLGIIDVDGELVSRTLPLDMLPESDTTLETG*
rootH1_101523125	3300003323	Sugarcane Root And Bulk Soil	MHASGMNARTPEPGSIPSAPFDDLDLDNHENEAEWDRRVMALAAERIAAERVRLERLGIIDADGEIVSRELPPDMLPESDTTLETG*
rootH1_102575752	3300003323	Sugarcane Root And Bulk Soil	MAAAPVHDLSVIPSAPFDDLDLDREGDEQEWDRRAMALAATRIDAARARLKRLGVIDVDGKLVSTDLPADMLADSDTTLETG*
Ga0062589_1023874613	3300004156	Soil	ASPIPSAPFDDLDLDRPEDEEEWERRVMALASARITAERVRLEQLGIIDANGDLVSRALPPDMLPESETTLETS*
Ga0062594_1019262341	3300005093	Soil	QIGHDSGMAHVNDASPIPSAPFDDLDLDRPEDEEEWERRVMALASARITAERVRLEQLGIIDANGDLVSRALPPDMLPESETTLETS*
Ga0065696_13474501	3300005280	Switchgrass Rhizosphere Bulk Soil	MATRMAEEAYFGHPSVVHTPTNEASPIPSAPFDDLDLDCPGDEEEWERRVMALAAERIAAERVRLQRLGIIDANGDLVSRELPPDMLSESDTTLETG*
Ga0066681_105218521	3300005451	Soil	MSSDDTSVIPSARVDNLDLDREQDEIEWERRVMRLSAERIRSARERLERLGIIDADGNLVSKDLPPDMDPASETTVETG*
Ga0070672_1002129032	3300005543	Miscanthus Rhizosphere	MNARTPEPGPPIPCAPFDDLDLEKPEDESEWDRRVMALAAARIATERVRLERLGIIGADGELISSALPPDMLPESDTTLETG*
Ga0068855_10000022325	3300005563	Corn Rhizosphere	VVHSYGMNARTPEPGSPIPSAPFDDLDLEKPEDEAEWDRRVMALSAARIAAERVRLERLGIIDADGELISRDLPPDMLPESDTTLETG*
Ga0068855_10000063526	3300005563	Corn Rhizosphere	MAAASVHDLSVIPSAPFDDLDLDREGDEEEWERRAMALAATRIDAARARLQRLGIIDVNGELVSTDLPADMLADSDTTLETG*
Ga0068857_1011725412	3300005577	Corn Rhizosphere	MANAPVSSPPVIPSARFDDLDLDTFDGAAEWERRVMEMANARVQAARGRLERLGIIDIEGRLVSTELTVDMLPDSDATLETG*
Ga0068864_1018173243	3300005618	Switchgrass Rhizosphere	MQARVNDPSPIPSAPFGDLDLDRTEDEEEWERRVMALAAARIAAERVRLERLCIVDANGELVSRDLPPDMRPESETTLETG*
Ga0074479_105475292	3300005829	Sediment (Intertidal)	VQPVAASPIPSAPLDDLDLDSPQDQEEWDRRVMALAAARIAAERVRLERLGIVDAKGELVSHDLPPDMLPESDTTLETG*
Ga0074470_101096653	3300005836	Sediment (Intertidal)	VTTEASPIPSAPFDDLDLDLPDDEEEWERRVMVLASTRILAERVRLEGLGVIDADGNLVSRDLPADMLPESKLTLETG*
Ga0074470_107620521	3300005836	Sediment (Intertidal)	IVQASAVAPFPIPSAPFDDLDLDIPADEEEWERRVMALAAGRIAAERVRLEHLGIIDAKGDLRSTELPPDMRPESETTLETG*
Ga0066788_100307172	3300005944	Soil	MNARTPEPGSPIPSAPFDDLDLEKPEDEAEWDRRVMALAAERIAAERVRLERLGIIDENGELISRALPPDMLPESDTTLETG*
Ga0066788_100846642	3300005944	Soil	MLSDMAAGATHDLSPIPSAHFDDLDIDADREERERRLMSLASERLAAARARLERLGIIDAEGNLVSNALPPDMLGTARPLVNPR*
Ga0080027_100085473	3300005993	Prmafrost Soil	MLSDMAAGATHDLSPIPSAHFDDLDLDIDADREEWERRLMSLASERLAAARARLERLGIIDAEGKLVSNALPPDMLGTARPLVNPR*
Ga0080027_100105952	3300005993	Prmafrost Soil	MNARTPEPGSPIPSAPFDDLDLEKPEDEAEWDRRVMALAAERIAAERVRLERLGIIDADGELISRALPPDMLPESDTTLETG*
Ga0070765_1013499751	3300006176	Soil	MQSSATEPSPIPSAPFHDLDLDRPEDEEEWERRVMALAAARIVAERARLERLGIIDATGNLVSTTLPPDMLPESDTTVETG*
Ga0079222_124988872	3300006755	Agricultural Soil	VSSPAQDLSPIPSAPFDDLDLERPEDEEQWERRVMAVATARITAERARLEQLGIIDSAGNLVSDELP
Ga0075425_1027243611	3300006854	Populus Rhizosphere	ADPLEMRHPSLMNGRESDPSPIPSAPFDDLDLDRPEDEEEWERRVMALAAARIAAERARLERLGIIDANGNLVSTELPSDMLPESDTTLETG*
Ga0105044_109195822	3300007521	Freshwater	MAAAPVHNLSLIPSAPFDDLDLERDEDEQEWERRVMVLAATRIAAGRVRLQRLGIVDSNGKPLSNELPVDMLPDSDSTLETG*
Ga0066710_1042356531	3300009012	Grasslands Soil	LYRSQRAIVSAMNSDDTKVIPTARVDDLDLDQEQDELEWERRVMRLSAERIRLARERLERLGIIDADGKLVSRVLPPDMDPASDTTVETG
Ga0105048_108289541	3300009032	Freshwater	MAAAPVHNLSLIPSAPFDDLDLERDEDEQEWERRVMVLAATRIAAARVRLQRLGIVDSNGKPLSNELPVDMLPDSDSTLETG*
Ga0105107_103053151	3300009087	Freshwater Sediment	MSAAPPPEIEPIPAAPVGDLDLDNDADEAAWERSVMALAEARLAASRERLQRLGIVDERGDLVSAALPPDMLPDSDATLETG*
Ga0105240_102503724	3300009093	Corn Rhizosphere	VRLLAEMREIRHALRMQGPVDAAAAVIPSAPFDDLDLDRPEDEEEWERRVMALAAERIAAERVRLERMGIIDANGELVSRELPADMLPESETTVETG*
Ga0118727_12299932	3300009128	Marine	MSEARVHQIPSAPVDDLDLDRDDDEMKWERRAMDLAAVRIRAARVRLEQLGIVDSNGELVSTELPDDMAPVSEPRI
Ga0116160_12513272	3300009715	Anaerobic Digestor Sludge	MLSSMGVTSDPIPSAPFDDLDIDRDDDEEEWERRLMQLAGQRVQAARNRLEHLGVVDADGKLVFTELPSDMRPDSDTTLETG*
Ga0136449_1018780582	3300010379	Peatlands Soil	MSAQPVADSSPIPSAPVADLDLERDDDEQEWERRVMDLASGRIRAARARLERLGIVDANGAVVSRALPADMTPESDATLETG*
Ga0137325_10096043	3300011415	Soil	MSAPASDLSPIPSAPFDDLDLDLDEDEEEWERRVMALAAQRIAEERARLERLGIIDANGNLVSTELTPDMLPESETTLETG*
Ga0137432_11713082	3300011439	Soil	MSAPASDLSPIPSAPFDDLDLDLDEDEEEWERRVMALAAQRIAEERARLERLGIIDANGNLVSTELTPDML
Ga0150985_1063299221	3300012212	Avena Fatua Rhizosphere	PEPGSIPSAPFDDLDLEKPEDEAEWDRRVMALAAERIAAERVRLERLGVIDADGELVSRVLPPDMLPESDTTLETG*
Ga0150985_1129952151	3300012212	Avena Fatua Rhizosphere	PPIPWAPFDDLDLEKPEDESEWDRRVMALAAARIAAERVRLERLGIIGEDGELISRDLPPDMLPESDTTLETG*
Ga0137435_11435332	3300012232	Soil	MNDPSLIPSAPFDDLDLDRPEDEEEWERRVMAMAAARIAAERVRLERLGIIDENGDLRSTVLSPDMLPDSDTSVDTG*
Ga0150984_1136337151	3300012469	Avena Fatua Rhizosphere	PEPGSPIPSAPFDDLDLEKPEDESEWDRRVMALAATRIAAERVRLERLGIIGEDGELISRDLPPDMLPESDTTLETG*
Ga0150984_1218042192	3300012469	Avena Fatua Rhizosphere	RRGPGPPIPCAPFDDLDLEKPEDESEWDRRVMALAAARIATERVRLERLGIIGADGELISRALPPDMLPESDTTLETG*
Ga0150984_1231540691	3300012469	Avena Fatua Rhizosphere	TPEPGSIPSAPFDDLDLEKPEDEAEWDRRVMALAAERIAAERVRLERLGVIDADGELVSRVLPPDMLPESDTTLETG*
Ga0157305_100046802	3300012891	Soil	VLPLPLALAVSPRVVHPYGMNARTPEPGPPIPCAPFDDLDLEKPEDESEWDRRVMALAAARIATERVRLERLGIIGTDGELISSALPPDMLPESDTTLETG*
Ga0157294_100400121	3300012892	Soil	RVVHPYGMNARTPEPGPPIPCAPFDDLDLEKPEDESEWDRRVMALAAARIATERVRLERLGIIGTDGELISSALPPDMLPESDTTLETG*
Ga0157291_100052482	3300012902	Soil	MNARTPEPGPPIPCAPFDDLDLEKPEDESEWDRRVMALAAARIATERVRLERLGIIGTDGELISSALPPDMLPESDTTLETG*
Ga0157289_100344482	3300012903	Soil	VLPLPLALAVSPRVVHPYGMNARTPEPGPPIPCAPFDDLDLEKPEDESEWDRRVMALAAARIAAERVRLERLGIIGADGELISRALPPDMLPESDTTLETG*
Ga0137410_103250842	3300012944	Vadose Zone Soil	MSAGVHDPSPIPSAPFDDLDLDREEDEEEWERRVMALASARIVAERARLERLGIVDAEGNLVSTELPPDMLPESDTTLETG*
Ga0164309_1000005247	3300012984	Soil	MNARTPEPGPPIPCAPFDDLDLDKPEDESEWDRRVMALAAARIAAERVRLERLGIIGTDGELISRALPPDMLPESDTTLETG*
Ga0164308_100093295	3300012985	Soil	LKRLLALAVSPRVVHPYEMNARTPEPGPPIPCAPFDDLDLEKPEDESEWDRRVMALAAARIATERVRLERLGIIGADGELISSALPPDMLPESDTTLETG*
Ga0164306_101586372	3300012988	Soil	MNARIPEPGSPIPCVPFDGLDLEKPEDESEWDRRVMALAAARIATERLRLERLGIIGADGELISRVVPPDMLQEPTQGSRPADA*
Ga0120158_101962393	3300013772	Permafrost	MHAPAFAAPAIPSAPFDDLDLDRPEDEEEWERRVMALAAARIGAERTRLEQLGIIDANGDLVSLDLPSDMLPESDTTLETG*
Ga0181526_103955771	3300014200	Bog	ARASEPVSPIPSAPFDDLDLDRAEAEEEWDRRVMALAAARIAAERVRLEQLGIIDPNGDLVSRELPPDMLPESGTTVETG*
Ga0075358_10844641	3300014303	Natural And Restored Wetlands	MHAPANISAAIPSAPFDDLDLDRPEDEQEWERRVMALASARIAAERVRLERMGVVDADGNLVSAELPSDMLVESDTTLQTG*
Ga0182018_106325502	3300014489	Palsa	FDDLDLDRDDDEAEWERRVMAVASARILAARARLERIGVVDVHGNLVSMELPPDMLPDSDATLETG*
Ga0182013_104519582	3300014492	Bog	MVARASESLMIPSVSLDDLDLDREADEAEWERRMMSLAAVRIIAARARLERLGVIDQAGKLVSKELPADMLPGSDATLETG*
Ga0182019_100105324	3300014498	Fen	MHARANHPLEIPSAPFEDLDLDRPEDEEVWERRVMALATARIVAERSRLERLGIIDASGNLVSTALPPDMLPESDTTLETG*
Ga0182012_108891301	3300014499	Bog	VSLDDLDLDREADEAEWERRMMSLAAVRIIAARARLERLGVIDQAGKLVSKELPADMLPGSDATLETG*
Ga0181519_101201951	3300014658	Bog	DDLDLDVAAGEQEWERRVMALAEERIQAERVRLEGLGIIDARGDLVSTALPSDMLAESETTLETG*
Ga0157376_105033331	3300014969	Miscanthus Rhizosphere	MDPRIPEPGSPIPCAPFDGLDLEKLEVESEWDRRVMALAAARIATERIRLERLGIIGADGELISRVVPPDMLPESDTTLETA*
Ga0137409_106631512	3300015245	Vadose Zone Soil	MSAGVHDPSPIPSAPFDDLDLDREEDEEEWERRVMALATARIVAERARLERLGIVNAEGNLVSTELPPDMLPESDTTLETG*
Ga0163144_102711813	3300015360	Freshwater Microbial Mat	MLALMSAAPAPSLPVIASAPFDDLDLDSADGEAEWERRVMEMASARIVAARARLERLGIVDADGKLVSTELTVDMLPDSDATLETG*
Ga0187782_100169802	3300017975	Tropical Peatland	MESRASASQSPIPSAPFDDLDLDRPEDEEEWERRVMALAAARISAERARLERLGVVDANGDLVSRDLPPDMRPESDTTVETG
Ga0187867_105097152	3300018033	Peatland	MHARASEPVAPIPSAPFDDLELDRAEDEEEWDRRVMALAAARIAAERVRLEQLGIIDPNGDLVSRELPPDMLPESGTTVETG
Ga0187772_105136702	3300018085	Tropical Peatland	MSAQRTADVPVIPSAPVGDLDLDRDEDEEEWERRAMELASVRIRAARARLERLGVVDANGDLVSRALPSDMTADSDTTLETG
Ga0163151_101679541	3300020057	Freshwater Microbial Mat	MAAAPVHNLSLIPSAPFDDLDLERDEDEQEWERRVMVLAATRIAAARVRLQRLGIVDSNGKPLSNELPVDMLPDSDSTLETG
Ga0163153_100249635	3300020186	Freshwater Microbial Mat	MAAMPANDLSPIPSAPIGDLDLDRVEDEEEWERRVMELASTRVLAARARLERLGIIDATGKLVSTELPLDMMPESDATLETG
Ga0163147_100507902	3300020192	Freshwater Microbial Mat	MLALMAAAPAPSLPVIASAPFDDLDLDSADGEAEWERRVMEMASARIVAARTRLERLGIVDTDGQLVSTELTVDMLPDSDATLETG
Ga0163154_102296262	3300020201	Freshwater Microbial Mat	MSAAPAPSLPVIASAPFDDLDLDSADGEAEWERRVMEMASARIVAARARLERLGIVDADGKLVSTELTVDMLPDSDATLETG
Ga0163152_101314593	3300020213	Freshwater Microbial Mat	MLALMSAAPAPSLPVIASAPFDDLDLDSADGEAEWERRVMEMASARIVAARARLERLGIVDADGKLVSTELTVDMLPDSDATLETG
Ga0210380_104565292	3300021082	Groundwater Sediment	APASDPSPIPSAPFDDLDLDLDEDEEEWERRVMALAAQRIAEERVRLERLGIIDANGNLVSTELTPDMLPDSETTLETG
Ga0210385_105606421	3300021402	Soil	GRVPALLLALAVSPRVVHSYGMNARTPEPGSPIPSAPFDDLDLEMPEDEAEWDRRVMALAAARIAAERVRLERLGIIDANGELISRDLPPDMLPESDTTLETG
Ga0210387_100525185	3300021405	Soil	VPTLLPALVVWPRVVHPYGMNAHTPEPGSPIPSAPFDDLDLEKPEAEAEWDRRVMALAAERIAVERVRLERLGIIDENGELISRALPPDMLPESDTTLETG
Ga0210402_104087222	3300021478	Soil	MLSDMAAATTHDLSPIPSAHFDDLDLDIDADREEWQRRLMSLASERLAAARARLERLGIIDAEGKLVSNALPPDMLPDSDATLETG
Ga0247781_11079981	3300022896	Plant Litter	FDDLDLEKPEDESEWDRRVMALAAARIATERVRLERLGIIGTDGELISSALPPDMLPESDTTLETG
Ga0247766_10160152	3300022906	Plant Litter	MNARTPEPGPPIPCAPFDDLDLEKPEDESEWDRRVMALAAARIATERVRLERLGIIGADGELISRVLPPDMLPESDTTLETG
Ga0247768_10180771	3300022910	Plant Litter	PEPGPPIPCAPFDDLDLEKPEDESEWDRRVMALAAARIATERVRLERLGIIGTDGELISSALPPDMLPESDTTLETG
Ga0247777_10863242	3300022917	Plant Litter	MNARTPEPGPPIPCAPFDDLDLEKPEDESEWDRRVMALAAARIATERVRLERLGIIGTDGELISSALPPDMLPESDTTLETG
Ga0247796_10463341	3300023261	Soil	LALAVSPRVVHPYGMNARTPEPGPPIPCAPFDDLDLEKPEDESEWDRRVMALAAARIATERVRLERLGIIGTDGELISSALPPDMLPESDTTLETG
Ga0247772_100006155	3300023264	Plant Litter	MNARTPESGSIPSAPFDDLDLDSPEDEAEWDRRVMALAGERIAAERVRLERLGIIDADGELVSRALPPDMLPESDTTLETG
Ga0247780_10523341	3300023265	Plant Litter	LAVSPRVVHPYGMNARTPEPGPPIPCAPFDDLDLEKPEDESEWDRRVMALAAARIATERVRLERLGIIGTDGELISSALPPDMLPESDTTLETG
Ga0247664_10515232	3300024232	Soil	MATAPVHDLSAIPSAPFDDLDLDREGDEQEWERRAMALAATRIDAARTRLQRLGVIDVDGKLLSTDLPADMRAGRRAAASPRDRS
Ga0208220_11403461	3300025627	Arctic Peat Soil	MSVQRTADVPAIPSAPVGNLDLDRDADEEEWERRVMDLASVRISAARARLERLGVVDASGVLVSRALPSDMTAESDT
Ga0208480_10340173	3300025633	Arctic Peat Soil	MSVQRTADVPAIPSAPVGNLDLDRDADEEEWERRVMDLASVRISAARARLERLGVVDASGVLVSRALPSDMTAESDTTLETG
Ga0207695_106183911	3300025913	Corn Rhizosphere	AVIPSAPFDDLDLDRPEDEEEWERRVMALAAERIAAERVRLERMGIIDANGELVSRELPADMLPESETTVETG
Ga0207691_102665482	3300025940	Miscanthus Rhizosphere	MNARTPEPGPPIPCAPFDDLDLEKPEDESEWDRRVMALAAARIATERVRLERLGIIGADGELISSALPPDMLPESDTTLETG
Ga0207667_1000202714	3300025949	Corn Rhizosphere	VVHSYGMNARTPEPGSPIPSAPFDDLDLEKPEDEAEWDRRVMALSAARIAAERVRLERLGIIDADGELISRDLPPDMLPESDTTLETG
Ga0207667_100044196	3300025949	Corn Rhizosphere	MAAASVHDLSVIPSAPFDDLDLDREGDEEEWERRAMALAATRIDAARARLQRLGIIDVNGELVSTDLPADMLADSDTTLETG
Ga0207674_112189542	3300026116	Corn Rhizosphere	MANAPVSSPPVIPSARFDDLDLDTFDGAAEWERRVMEMANARVQAARGRLERLGIIDIEGRLVSTELTVDMLPDSDATLETG
Ga0209849_10257431	3300026215	Soil	MNARTPEPGSPIPSAPFDDLDLEKPEDEAEWDRRVMALAAARIAAERVRLERLGIIDAHGELISRDLPPDMLPESDTTLETG
Ga0209863_100066366	3300026281	Prmafrost Soil	MLSDMAAGATHDLSPIPSAHFDDLDLDIDADREEWERRLMSLASERLAAARARLERLGIIDAEGNLVSNALPPDMLGTARPLVNPR
Ga0209863_100283633	3300026281	Prmafrost Soil	MNARTPEPGSPIPSAPFDDLDLEKPEDEAEWDRRVMALAAERIAAERVRLERLGIIDADGELISRALPPDMLPESDTTLETG
Ga0209490_101371515	3300027823	Freshwater	MAAAPVHNLSLIPSAPFDDLDLERDEDEQEWERRVMVLAATRIAAGRVRLQRLGIVDSNGKPLSNELPVDMLPDSDSTLETG
Ga0209415_100902951	3300027905	Peatlands Soil	MSAQPVADSSPIPSAPVADLDLERDDDEQEWERRVMDLASGRIRAARARLERLGIVDANGAVVSRALPADMTPESDATLETG
Ga0209415_105249222	3300027905	Peatlands Soil	MSAVPADDLSPIPSAPLSDLNPDRDEDDEEWERRVMQLATVRLQAARTRLERLGVIDAAGKLVSRELPADMMPASDATLETG
Ga0209415_106166612	3300027905	Peatlands Soil	MQSSATDPSPIPSAPFHDLDLDRPEDEEEWERRVMALAGARIVAERARLERLGIIDASGNLVSTTLPPDMLTESDTTVETG
Ga0265334_100048043	3300028573	Rhizosphere	MHVRANEAQLIPVAPFDDLDLDRPEDEAEWDRRVMALAGARITAERVRLERLGIIDVNGNLVSHELPPDMLAESDTTLETG
Ga0302166_100262311	3300028652	Fen	MNARTPEPGPPIPCARFDDLDLEKPEDESEWDRRVMALAAARIATERVRLERLGIIGADGELISRALPPDMLPESDTTLETG
Ga0302205_101943592	3300028739	Fen	MNARTPEPGPPIPCAPFDDLDLEKPEDESEWDRRVMALAAARIATERVRLERLGIIGADGEL
Ga0302279_101037392	3300028783	Bog	MVARASESLMIPSVSLDDLDLDREADEAEWERRMMSLAAVRIIAARARLERLGVIDQAGKLVSKELPADMLPGSDATLETG
Ga0307503_104546421	3300028802	Soil	MAAAPVHDLSVIPSAPFDDLDLDREGDEQEWERRAMALAATRIDAARVRLQRLGVIDVDGKLVST
Ga0302263_101081632	3300028869	Fen	EPGPPIPCAPFDDLDLEKPEDESEWDRRVMALAAARIATERVRLERLGIIGADGELISRVVPRDMLQDPTQGSRPADA
Ga0311361_104253072	3300029911	Bog	MIPSVSLDDLDLDREADEAEWERRMMSLAAVRIIAARARLERLGVIDQAGKLVSKELPADMLPGSDATLETG
Ga0311347_104068341	3300029923	Fen	MNARTPEPGSPIPSAPFDDLDLEKPEDESEWDRRMMALAATRIAAERVRLERLGIIGEDGELISRALPPDMIPESDTTLET
Ga0302298_100305242	3300029980	Fen	MNARTPEPGPPIPCAPFDDLDLEKPEDESEWDRRVMALAAARIATERVRLERLGIIGADGELISRVVPPDMLQDPTQGSRPADA
Ga0311334_101397082	3300029987	Fen	MNARTPEPGPPIPCARFDDLDLEKPEDESEWDRRVMALAAARIATERVRLERLGIIGADGELISCVVPPDMLQDPTQGSRPADA
Ga0311334_108311472	3300029987	Fen	MKCLADLPRVVHDLSMHARTIEPSPIPSAPFDDLDLDNPTDAEEWERRVMALAAERIVAERARLEQLGIIDKNGDLVSHELPPDMGIRCTRSVLDAALG
Ga0311334_118283072	3300029987	Fen	VNARTPEPGSLIPSAPFDDLDIEKPDDESEWDRRLMALAATRIAAERVRLERLGIIGEDGELISRALPPDMIPESDTTLETG
Ga0311365_112516712	3300029989	Fen	MNARTPEPGSPIPSAPFDDLDLEKPEDESEWDRRVMALAAARIATERVRLERLGIIGADGELISRA
Ga0311365_118584971	3300029989	Fen	MNARTPEAGSPIPSAPFDDLDLEKPDDESEWDRRVMALAATRIAAERVRLERLGIIGEDGELISHDLPPDMLPESDTTLETG
Ga0311336_100780633	3300029990	Fen	MHARANHPLEIPSAPFEDLDLDRPEDEEVWERRVMALATARIVAERSRLERLGIIDASGNLVSTALPPDMLPESDTTLETG
Ga0311337_102605391	3300030000	Fen	MNARTPEPGPPIPCARFDDLDLEKPEDESEWDRRVMALAAARIATERVRLERLGIIGADGELISRVVPRDM
Ga0311337_103528242	3300030000	Fen	MHARANHPLEIPSAPFEDLDLDRPEDEEVWERRVMALAAARIVAERSRLERLGIIDASGNLVSTALPPDMLPESDTTLETG
Ga0311350_101769013	3300030002	Fen	MHARTIESSPIPSAPFDDLDLDNPTDAEEWERRVMALAAARIVAERARLEQLGIIDKNGDLVSHELPPDMSSESDTTVETG
Ga0302172_101848041	3300030003	Fen	HPLEIPSAPFEDLDLDRPEDEEVWERRVMALATARIVAERSRLERLGIIDASGNLVSTALPPDMLPESDTTLETG
Ga0311333_104006972	3300030114	Fen	MHARTIEPSPIPSAPFDDLDLDNPTDAEEWERRVMALAAERIVAERARLEQLGIIDKNGDLVSHELPPDMGIRCTRSVLDAALG
Ga0311349_102328763	3300030294	Fen	MNARTAEPGPPIPCAPFDDLDLEKPEDESEWDRRVMALAAARIATERVRLERLGIIGADGELISRVVPPDMLQDPTQGSRPADA
Ga0311349_110400242	3300030294	Fen	MNARTPEPGPPIPCAPFDGLDLEKPEDESEWDRRVMALAAARIATERVRLERLGIIGADGELISRALPPDMLPESDTTLETG
Ga0311349_114232021	3300030294	Fen	MNARTPEPGSPIPSAPFDDLDLEKPEDESEWDRRMMALAATRIAAERVRLERLGIIGEDGELISRALPPDMLPESHTTLETG
Ga0311372_106187091	3300030520	Palsa	HSSIMHAPAKIPSLIPSAPFDDLDLDRPEDEEEWEHRVMALAAARIVAERARLERLGIIDTNGNLVSTALPPDMFPESDTTLETG
Ga0170824_1283275012	3300031231	Forest Soil	MNARTPEPGSPIPSAPFDDLDLEKPEGEAEWDRRVMALSAARIAAERVRLERLGIIDAHGELISRDPPPDMLPESDTTLETG
Ga0302323_1006697932	3300031232	Fen	MSMTAAQALDLSLIPSAPVVDLDLDRDEDEEEWERRVMELAVVRVKGARARLEALGVVDADGNLVSKSLPPDMTPESDTTLETG
Ga0302323_1011250822	3300031232	Fen	MHARTIEPSPIPSAPFDDLDLDNPTDAEEWERRVMALAAARIVAERARLEQLGIIDKNGDLVSHELPPDMGIRCTRSVLDAALG
Ga0265339_101622091	3300031249	Rhizosphere	MGHSFIMHVRANEAQLIPVAPFDDLDLDRPEDEAEWDRRVMALAGARITAERVRLERLGIIDVNGNLVSHELPPDMLAESDTTLETG
Ga0170820_170988772	3300031446	Forest Soil	PGSPIPSAPFDDLDLEKPEGEAEWDRRVMALSAARIAAERVRLERLGIIDAHGELISRDPPPDMLPESDTTLETG
Ga0307513_101364155	3300031456	Ectomycorrhiza	APFDDLDLDRIEGEEEWERRVMALAAARIGAERTRLERLGIIDANGDLVSTDLPSDMLPDSDTTLETG
Ga0307513_104177362	3300031456	Ectomycorrhiza	HKVHPYGMNARTPEPGPPIPCAPFDDLDLEKPEDESEWDRRVMALAAARIATERVRLERLGIIGADGELISRALPPDMLPESDTTLETG
Ga0302320_120196451	3300031524	Bog	AELMVARASESLMIPSVSLDDLDLDREADEAEWERRMMSLAAVRIIAARARLERLGVIDQAGKLVSKELPADMLPGSDATLETG
Ga0302321_1006079141	3300031726	Fen	MNARTPEAGSPIPSAPFDDLDLEKPDDESEWDRRVMALAATRIAAERVRLERLGIIGEDGELISHDLPPDMLPE
Ga0308175_1002969753	3300031938	Soil	SPRVVHPSGMNARTPEPGPPIPCAPFDDLDLEKPEDESEWDRRVMALASARIATERVRLERLGIIGADGELISRALPPDMLPESDTTLETG
Ga0315912_100087619	3300032157	Soil	MNVRTPELGPPIPCAPFDDLDLEKPEDELEWDRRVMALAAARIAEERVRLERLGIIGADGELISLVLPPDMGPNGKR
Ga0306920_1022384251	3300032261	Soil	MHAPVDELSPIPSAPFDDLDLDRPEDEEEWERRVTVLASARIAAERARLERLGIIDADGELVSRELPPDMLPESDATVETG
Ga0326728_100459585	3300033402	Peat Soil	MLVVMHTRPSAQSPIPSAPFDDLDLDRPEDEEQWEARVMALASARIVAERARLECLGVIDKNGDIVSTALPSDMLPESDTTLETG
Ga0214472_107722482	3300033407	Soil	MHARATDPISLIPHAPFDDLDLDRPEDEEEWERRVMVLAAARIAAERVRLERLGIIDANGDLISHELPPDMLPE
Ga0316628_1000368704	3300033513	Soil	MRARANAHPSPIPTAPFDDLDLDRADDEEEWERRVMALAAARIAAERTRLQALGIIDASGDLVSRELPPDMLPESDTTLETG
Ga0371488_0002747_13210_13467	3300033983	Peat Soil	MLVVMHTRPSAQSPIPSAPFDDLDLDRPEDEEQWEARVMALASARIVAERARLECLGVIDKNGDIVSTALPADMLPESDTTLETG
Ga0370515_0073500_1250_1486	3300034163	Untreated Peat Soil	PAKTPSLIPSAPFDDLDLDRPEDEEEWEHRVMALAAARIVAERARLERLGIIDTNGNLVSTALPPDMFPESDTTLETG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F061069

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences