Metagenome / Metatranscriptome Family F061066

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F061066
Family Type	Metagenome / Metatranscriptome
Number of Sequences	132
Average Sequence Length	60 residues
Representative Sequence	YVLAVGPHAASPRFEVLAEAGRVRLADGSDGGRRFALVEVIDLARPGEIDRLRRELDE
Number of Associated Samples	114
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.53 %
% of genes near scaffold ends (potentially truncated)	95.45 %
% of genes from short scaffolds (< 2000 bps)	90.91 %
Associated GOLD sequencing projects	109
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.727 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (37.121 % of family members)
Environment Ontology (ENVO)	Unclassified (42.424 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (42.424 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 11.63% β-sheet: 33.72% Coil/Unstructured: 54.65%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF07729	FCD	18.94
PF07690	MFS_1	6.82
PF11706	zf-CGNR	0.76
PF03030	H_PPase	0.76
PF02775	TPP_enzyme_C	0.76

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG1802	DNA-binding transcriptional regulator, GntR family	Transcription [K]	18.94
COG2186	DNA-binding transcriptional regulator, FadR family	Transcription [K]	18.94
COG3808	Na+ or H+-translocating membrane pyrophosphatase	Energy production and conversion [C]	0.76

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.73 %
Unclassified	root	N/A	2.27 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.73 %
Unclassified	root	N/A	2.27 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.73 %
Unclassified	root	N/A	2.27 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	96.97 %
Unclassified	root	N/A	2.27 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	96.97 %
Unclassified	root	N/A	2.27 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	82.58 %
Unclassified	root	N/A	2.27 %

Name	Rank	Taxonomy	Distribution
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	50.00 %
Unclassified	root	N/A	2.27 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.76 %

Name	Rank	Taxonomy	Distribution
unclassified Pseudonocardiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales	50.00 %
Unclassified	root	N/A	2.27 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.76 %

Name	Rank	Taxonomy	Distribution
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	50.00 %
Unclassified	root	N/A	2.27 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10144122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1643	Open in IMG/M
3300002906\|JGI25614J43888_10188800	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	557	Open in IMG/M
3300002914\|JGI25617J43924_10334203	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	525	Open in IMG/M
3300005518\|Ga0070699_101534409	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	611	Open in IMG/M
3300005563\|Ga0068855_101876245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	607	Open in IMG/M
3300005764\|Ga0066903_105810438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	648	Open in IMG/M
3300006031\|Ga0066651_10439464	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	693	Open in IMG/M
3300006176\|Ga0070765_101447435	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	647	Open in IMG/M
3300009137\|Ga0066709_100237899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2426	Open in IMG/M
3300009522\|Ga0116218_1395148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	617	Open in IMG/M
3300009525\|Ga0116220_10546008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	529	Open in IMG/M
3300009672\|Ga0116215_1019416	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3177	Open in IMG/M
3300009826\|Ga0123355_11710831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	599	Open in IMG/M
3300010154\|Ga0127503_11158957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	534	Open in IMG/M
3300010359\|Ga0126376_10865528	All Organisms → cellular organisms → Bacteria	890	Open in IMG/M
3300010362\|Ga0126377_11374668	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	779	Open in IMG/M
3300010371\|Ga0134125_12303846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	586	Open in IMG/M
3300010376\|Ga0126381_102155491	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	802	Open in IMG/M
3300010379\|Ga0136449_102437147	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	753	Open in IMG/M
3300010379\|Ga0136449_103718927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	576	Open in IMG/M
3300010397\|Ga0134124_11706821	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	662	Open in IMG/M
3300010876\|Ga0126361_10209343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1136	Open in IMG/M
3300011076\|Ga0138574_1012416	Not Available	1050	Open in IMG/M
3300011404\|Ga0153951_1089596	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	568	Open in IMG/M
3300012204\|Ga0137374_11150998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	548	Open in IMG/M
3300012207\|Ga0137381_10053362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3343	Open in IMG/M
3300012357\|Ga0137384_11263899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	584	Open in IMG/M
3300012489\|Ga0157349_1001033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1497	Open in IMG/M
3300012506\|Ga0157324_1062146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	513	Open in IMG/M
3300012924\|Ga0137413_10126834	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1634	Open in IMG/M
3300012955\|Ga0164298_10185628	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1202	Open in IMG/M
3300012971\|Ga0126369_11449901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	776	Open in IMG/M
3300014150\|Ga0134081_10189282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	694	Open in IMG/M
3300014489\|Ga0182018_10576916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	591	Open in IMG/M
3300014489\|Ga0182018_10748590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	508	Open in IMG/M
3300015371\|Ga0132258_13843916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1022	Open in IMG/M
3300016270\|Ga0182036_10572190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	903	Open in IMG/M
3300016357\|Ga0182032_11048874	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	698	Open in IMG/M
3300016371\|Ga0182034_11440527	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	603	Open in IMG/M
3300016422\|Ga0182039_11311730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	656	Open in IMG/M
3300016445\|Ga0182038_10216393	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1519	Open in IMG/M
3300017822\|Ga0187802_10354314	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	577	Open in IMG/M
3300017942\|Ga0187808_10289609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	737	Open in IMG/M
3300017942\|Ga0187808_10543343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	540	Open in IMG/M
3300017970\|Ga0187783_10593849	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	801	Open in IMG/M
3300017975\|Ga0187782_10092473	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2221	Open in IMG/M
3300018001\|Ga0187815_10134364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1046	Open in IMG/M
3300018058\|Ga0187766_10116262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1635	Open in IMG/M
3300020062\|Ga0193724_1081392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	671	Open in IMG/M
3300020582\|Ga0210395_11227138	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	550	Open in IMG/M
3300021180\|Ga0210396_11656148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	521	Open in IMG/M
3300021181\|Ga0210388_11298437	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	614	Open in IMG/M
3300021432\|Ga0210384_10227523	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1678	Open in IMG/M
3300021474\|Ga0210390_11604781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	512	Open in IMG/M
3300021560\|Ga0126371_11403647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	829	Open in IMG/M
3300024182\|Ga0247669_1026355	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	988	Open in IMG/M
3300025906\|Ga0207699_11256266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	548	Open in IMG/M
3300025910\|Ga0207684_11189795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	631	Open in IMG/M
3300026078\|Ga0207702_11943447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	579	Open in IMG/M
3300026319\|Ga0209647_1307644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	533	Open in IMG/M
3300026552\|Ga0209577_10469434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	862	Open in IMG/M
3300027096\|Ga0208099_1018380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	971	Open in IMG/M
3300027370\|Ga0209010_1018691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	1217	Open in IMG/M
3300027857\|Ga0209166_10711827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	505	Open in IMG/M
3300027875\|Ga0209283_10761917	Not Available	599	Open in IMG/M
3300027882\|Ga0209590_10682505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	658	Open in IMG/M
3300027904\|Ga0209737_11419636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	622	Open in IMG/M
3300029701\|Ga0222748_1032863	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	821	Open in IMG/M
3300030730\|Ga0307482_1081684	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	853	Open in IMG/M
3300031231\|Ga0170824_118290686	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	876	Open in IMG/M
3300031474\|Ga0170818_107346805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	840	Open in IMG/M
3300031543\|Ga0318516_10691274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	579	Open in IMG/M
3300031544\|Ga0318534_10276972	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	967	Open in IMG/M
3300031572\|Ga0318515_10019353	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3196	Open in IMG/M
3300031572\|Ga0318515_10482856	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	662	Open in IMG/M
3300031640\|Ga0318555_10445316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	702	Open in IMG/M
3300031668\|Ga0318542_10659764	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	546	Open in IMG/M
3300031679\|Ga0318561_10354930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	804	Open in IMG/M
3300031680\|Ga0318574_10733393	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	579	Open in IMG/M
3300031682\|Ga0318560_10406567	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	737	Open in IMG/M
3300031719\|Ga0306917_10695140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	799	Open in IMG/M
3300031719\|Ga0306917_10977606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	661	Open in IMG/M
3300031724\|Ga0318500_10147413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1105	Open in IMG/M
3300031744\|Ga0306918_10244650	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1367	Open in IMG/M
3300031768\|Ga0318509_10099244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1568	Open in IMG/M
3300031770\|Ga0318521_10812888	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	570	Open in IMG/M
3300031781\|Ga0318547_10017989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3425	Open in IMG/M
3300031781\|Ga0318547_10255376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1058	Open in IMG/M
3300031781\|Ga0318547_10572597	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	700	Open in IMG/M
3300031781\|Ga0318547_10745743	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	609	Open in IMG/M
3300031781\|Ga0318547_10990708	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	525	Open in IMG/M
3300031782\|Ga0318552_10267373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	868	Open in IMG/M
3300031795\|Ga0318557_10048680	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1776	Open in IMG/M
3300031797\|Ga0318550_10127171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1216	Open in IMG/M
3300031798\|Ga0318523_10214429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	962	Open in IMG/M
3300031799\|Ga0318565_10376850	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	688	Open in IMG/M
3300031805\|Ga0318497_10590642	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	623	Open in IMG/M
3300031819\|Ga0318568_10192101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1257	Open in IMG/M
3300031821\|Ga0318567_10511665	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	682	Open in IMG/M
3300031821\|Ga0318567_10681067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	583	Open in IMG/M
3300031833\|Ga0310917_10825881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	625	Open in IMG/M
3300031845\|Ga0318511_10187211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	917	Open in IMG/M
3300031846\|Ga0318512_10628730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	548	Open in IMG/M
3300031879\|Ga0306919_10969251	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	651	Open in IMG/M
3300031893\|Ga0318536_10639621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	531	Open in IMG/M
3300031894\|Ga0318522_10158342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	854	Open in IMG/M
3300031896\|Ga0318551_10329746	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	862	Open in IMG/M
3300031945\|Ga0310913_11096009	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	556	Open in IMG/M
3300031946\|Ga0310910_10525013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	940	Open in IMG/M
3300032001\|Ga0306922_10056988	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4056	Open in IMG/M
3300032039\|Ga0318559_10158738	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	1029	Open in IMG/M
3300032055\|Ga0318575_10058969	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1780	Open in IMG/M
3300032065\|Ga0318513_10072377	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1579	Open in IMG/M
3300032066\|Ga0318514_10233985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	966	Open in IMG/M
3300032066\|Ga0318514_10658816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	557	Open in IMG/M
3300032067\|Ga0318524_10450291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	673	Open in IMG/M
3300032072\|Ga0326631_117646	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	518	Open in IMG/M
3300032076\|Ga0306924_10997050	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	920	Open in IMG/M
3300032261\|Ga0306920_100138967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3617	Open in IMG/M
3300032261\|Ga0306920_100668646	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1532	Open in IMG/M
3300032261\|Ga0306920_103217012	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	611	Open in IMG/M
3300032805\|Ga0335078_10163551	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3134	Open in IMG/M
3300032805\|Ga0335078_10338953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2002	Open in IMG/M
3300032805\|Ga0335078_11775602	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	672	Open in IMG/M
3300032828\|Ga0335080_10314021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1699	Open in IMG/M
3300032892\|Ga0335081_11116272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	907	Open in IMG/M
3300032892\|Ga0335081_12346424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	556	Open in IMG/M
3300032896\|Ga0335075_11478718	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	567	Open in IMG/M
3300032896\|Ga0335075_11573263	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	542	Open in IMG/M
3300033158\|Ga0335077_10189933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2319	Open in IMG/M
3300033290\|Ga0318519_11023832	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	513	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.70%
Host-Associated	Host-Associated	5.30%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.91%
Aquatic	Environmental → Aquatic	3.79%
Plants	Host-Associated → Plants	3.03%
Arthropoda	Host-Associated → Arthropoda	1.52%
Fungi	Host-Associated → Fungi	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.91%
Freshwater	Environmental → Aquatic → Freshwater	3.79%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.03%
Digestive System	Host-Associated → Arthropoda → Digestive System	1.52%
Mycelium	Host-Associated → Fungi → Mycelium	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	74.24%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.61%
Loam	Environmental → Terrestrial → Soil → Loam	6.06%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.03%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.27%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	1.52%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.76%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	50.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.70%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.09%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.55%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.79%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.03%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.27%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.27%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.52%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	1.52%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.76%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	37.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.61%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	6.82%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.55%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.55%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.79%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.03%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.27%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.27%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.27%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.27%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.52%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.52%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	1.52%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	1.52%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.52%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.76%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.76%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.76%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.76%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.76%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.76%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.76%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.76%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009826	Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1	Host-Associated	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011076	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 59 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011404	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ035 MetaG	Host-Associated	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012489	Unplanted soil (control) microbial communities from North Carolina - M.Soil.5.yng.040610	Environmental	Open in IMG/M
3300012506	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.6.old.040610	Host-Associated	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300020062	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a1	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024182	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK10	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027096	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF043 (SPAdes)	Environmental	Open in IMG/M
3300027370	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O3 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027904	Cubitermes ugandensis P3 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P3 (SPAdes)	Host-Associated	Open in IMG/M
3300029701	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032072	Soil microbial communities from Bohemian Forest, Czech Republic ? CSI2 metaT (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_101441221	3300001593	Forest Soil	EVYTEAEPVLLADGSAGGRQFALAEVIDLANPGAADRLRAELAALPDRSR*
JGI25614J43888_101888001	3300002906	Grasslands Soil	LADRRAVLRYVLAVAPQAASSRFEVYAEAEPLRLADGSPGGRQFALAEVIDLARPGETDRLREELAGLGDDRT*
JGI25617J43924_103342031	3300002914	Grasslands Soil	RAVLRYVLAVAPQAASSRFEVYAEAEPLRLADGSPGGRQFALAEVIDLARPGETDRLREELAGLGDDRT*
Ga0070699_1015344091	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VLAVGPHAASPRFEVHAEAERVRLADGSDGGRRFALVEVIDLARPGEIERLRRELHE*
Ga0068855_1018762451	3300005563	Corn Rhizosphere	LPDRQAVLRYVLAVGPHAASPRFEVHAEAERVRLADGSDGGRRFALVEVIDLARPGEIERLRRELDD*
Ga0066903_1058104382	3300005764	Tropical Forest Soil	RFEVFTESEPLRLADGSPGGRTFSLTEVIDLSLPGEASRLAAELSGHARQEDPR*
Ga0066651_104394643	3300006031	Soil	VLRYVLAVGPHAVSPRFEVHAEAERVRLADGSDGGRRFALVEVIDLARPGEIERLRRELHE*
Ga0070765_1014474351	3300006176	Soil	RYVLAIAPQAASTRFEVFTEAEPVTLADGSPGGRRFALAEVIDLARPGEADRLQDELKRPPA*
Ga0066709_1002378991	3300009137	Grasslands Soil	VGPHAASPRFEVLAEAGRVRLADGSDGGRRFALVEVIDLARPGEIDRLRRELDE*
Ga0116218_13951482	3300009522	Peatlands Soil	RFEVLAETGRVRLADGSDGGRQFALVEVIDLARPGEVDRLRQELDGAAEPG*
Ga0116220_105460082	3300009525	Peatlands Soil	FEVLTETGRVRLTDGTDGGRQFALVEVIDLARPGELDRLRQELDGLAEPG*
Ga0116215_10194161	3300009672	Peatlands Soil	LAVGPHAASPRFEVLTETGRVRLADGTDGGRQFARVEVIDLARPGELDRLRQELDGA*
Ga0123355_117108312	3300009826	Termite Gut	RQAVLRYVLAIGPKAASKRFEVFTEAEPVMLSDGTEGGRTFALAEVIDLARPGEAERLQAELAALDSEPAPEHGTAPGGRR*
Ga0127503_111589571	3300010154	Soil	CFEVHAETGRVLLADGSDGGRRFALVEVIDLARPGEIERLRRELAAADE*
Ga0126376_108655282	3300010359	Tropical Forest Soil	VLRYVLAVGPHAASQRFEVFAEGEPVRLADGTPGGRRFTLAEVIDLGRPGEAGRLRRELEALATGGGT*
Ga0126377_113746681	3300010362	Tropical Forest Soil	AVLRYVLAVGLKAASPRFEVFHESDPVVLGDGSPGGRAFSLVEIIDLAQPGEIDRLRTELSTTGQPGGQP*
Ga0134125_123038461	3300010371	Terrestrial Soil	VLRYVLAVGPHAASPRFEVHAEAERIRLADGSDGGRRFALVEVIDLARPGEIERLRRELHE*
Ga0126381_1021554912	3300010376	Tropical Forest Soil	VLRYVLAVGPHAASQRFEVFAEGEPVRLADGTPGGRRFTLAEVIDLGRPGEADRLRRELDAMGAGGGT*
Ga0136449_1024371471	3300010379	Peatlands Soil	AVLRYVLAVGPHAASPRFEVLTETGRVRLADGTDGGRQFALVEVIDLARPGELDRLRQELDGA*
Ga0136449_1037189271	3300010379	Peatlands Soil	AVLRYVLAVGPHAASPRFEVLTETGRVRLADGTDGGRQFARVEVIDLARPGELDRLRQELDGA*
Ga0134124_117068213	3300010397	Terrestrial Soil	AVGPHAASPRFEVHAEAERIRLADGSDGGRRFALVEVIDLARPGEIERLRRELHE*
Ga0126361_102093433	3300010876	Boreal Forest Soil	VGPHAADPRFEVLTETGRVRLADGSDGGRQFALVEVIDLARPGEIDRLRRELDG*
Ga0138574_10124162	3300011076	Peatlands Soil	PHAASPRFEVLTETGRVRLADGTDGGRQFALVEVIDLARPGELDRLRQELDGA*
Ga0153951_10895962	3300011404	Attine Ant Fungus Gardens	EAEPVLLADGSAGGRQFALAEVIDLANPGAADRLRAELAALPDRSR*
Ga0137374_111509981	3300012204	Vadose Zone Soil	ASPRFEVHAEAERVRLADGSDGGRRFALAEVIDLARPGEIERLRRELDE*
Ga0137381_100533621	3300012207	Vadose Zone Soil	RYVLAVGPHAASPRFEVLTETGRVRLTDGSDGGRQFALVEVIDLARPGEIDRLRRELDGPP*
Ga0137384_112638992	3300012357	Vadose Zone Soil	QAVLRYVLAVGLKAASPRFEVFRESDPIVLGDGSPGGRAFSLVEIIDLARPGEVDRLRSELAAAGPPGTRSPDTQSPGTQAPGGPA*
Ga0157349_10010331	3300012489	Unplanted Soil	AVGPHAASPRFEVHVEAERIRLADGSDGGRRFALVEVIDLTRPGEIERLRRELHE*
Ga0157324_10621461	3300012506	Arabidopsis Rhizosphere	SPRFEVHVEAERIRLADGSDGGRRFALVEVIDLTRPGEIERLRRELHE*
Ga0137413_101268343	3300012924	Vadose Zone Soil	YLPDRQAVLRYVLAVGPKAASTRFEVFRESDPVVLGDGSPGGRGFSLVEIIDLARSGEVDRLRAELAAASPPEAPSPGGPA*
Ga0164298_101856284	3300012955	Soil	VGPQAASPRFEVHAETERVRLADGSDGGRRFALVEVIDLARPGEIERLRRELHD*
Ga0126369_114499013	3300012971	Tropical Forest Soil	GPHAASPRFEVHADMGRVLLADGSDGGRRFALVEVIDLARPGEIERLRRELAAADE*
Ga0134081_101892823	3300014150	Grasslands Soil	YVLAVGPHAASPRFEVLAEAGRVRLADGSDGGRRFALVEVIDLARPGEIDRLRRELDE*
Ga0182018_105769161	3300014489	Palsa	RFEVFAEAEPVRLADGSPGGRRFALAEVIDLARPGESDRLRAELAQGDDPT*
Ga0182018_107485902	3300014489	Palsa	AIAPHAASTRFEVYTEAEPVLLADGSAGGRQFALAEVIDLANPGEADRLRAELAALPDRSR*
Ga0132258_138439164	3300015371	Arabidopsis Rhizosphere	VLRYVLAGGPHAASPRFEVHADVGRVQLADGSDGGRRFALVEVIDLARPGEIERLRRELAMADE*
Ga0182036_105721903	3300016270	Soil	ASSRFEVFAETEPVRLADGSPGGRRFALAEVIDLARPGEADRLRRELGTFDDQP
Ga0182032_110488741	3300016357	Soil	IGSHPASPRFEVYESSPVRLADGSDGGRQFALVEVIDLSRQGEAERLRQELSDDS
Ga0182034_114405272	3300016371	Soil	LPDRQAVLRYVLAVGLKAASPRFEVFCESDPVVLGDGSPGGRAFSLVEIIDLARPGEIDRLRAELSVAGQPGGQP
Ga0182039_113117301	3300016422	Soil	AVLRYVLAVGPHAASPRFEVHAEAGRVLLADGSDGGRRFALVEVIDLARPGEIERLRRELAAAGE
Ga0182038_102163933	3300016445	Soil	HAASTRFEVFAEAEPVRLADGSPGGRRFALAEVIDLARPGEADRLRAELETLDDQP
Ga0187802_103543141	3300017822	Freshwater Sediment	RFEVFAEAGPVWLADGSDGGRQFSLVEVIDLSLAGEAERLREELGDGS
Ga0187808_102896091	3300017942	Freshwater Sediment	ASPRFEVLTETGRVRLADGTDGGRQFALVEVIDLARPGELDRLRQELDGSAEPG
Ga0187808_105433432	3300017942	Freshwater Sediment	GPHAASSLFEVFAEGPPVLLADGSFGGRRFDLVEVIDLARDGEAARLRTELGLR
Ga0187783_105938491	3300017970	Tropical Peatland	YVLAIAPHAASSRFEVFAETVPVRLADGSPGGRRFALAEVIDLARPGEADRLRAELENLDDQP
Ga0187782_100924735	3300017975	Tropical Peatland	VYAEAEPLVLADGSPGGRRFALAEVIDFAQPGEADRLRAELAELQESPP
Ga0187815_101343641	3300018001	Freshwater Sediment	SPRFEVFAEAEPVRLADGSDGGRQFSLVEVIDLGRPGEAERLREELDDGQC
Ga0187766_101162622	3300018058	Tropical Peatland	VLRYVLAVGPHAASPRFEVYAESGVVRLADGTDGGRQFTLVEVIDLGRPGEAERLRTELSHGT
Ga0193724_10813921	3300020062	Soil	VGPHAASPRFEVHAEADRVRLADGSDGGRRFALVEVIDLARPGEIERLRRELHE
Ga0210395_112271383	3300020582	Soil	DVLGVAAQAASPRFEVYESGPVRLADGSDGGLRYRLVEVIDVSRPGETDRLREELESGP
Ga0210396_116561482	3300021180	Soil	PRFEVLTETGRVRLADGTDGGRQFALVEVIDLARPGELDRLRQELDGSADPA
Ga0210388_112984372	3300021181	Soil	APQAASTRFELYAEGEPVLMADGSAGGRQFALAEVIDLARPGEADRIRAELELQPGNRP
Ga0210384_102275231	3300021432	Soil	RFEVYESGPVRLADGSDGGRRYRLVEVIDLSRPGEADRLREELDHGS
Ga0210390_116047811	3300021474	Soil	AASSRFEVYAEAEPVLLADGSPGGRQFALAEVIDFARPGEADRLRAELTTAPELPT
Ga0126371_114036474	3300021560	Tropical Forest Soil	VGPHAASPRFEVHAEAGRVLLADGSDGGRRFAQVEVIDLARPGEIERLRRELESSE
Ga0247669_10263551	3300024182	Soil	GPHAASPRFEVHAEAERIRLADGSDGGRRFALVEVIDLARPGEIERLRRELHE
Ga0207699_112562663	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	HAASPRFEVHAEAERVRLADGSDGGRRFALVEVIDLARPGEIERLRRELHE
Ga0207684_111897951	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	YLPDRQAVLRYVLAVGLKAASPRFEVFRESNPVVLSDGAPGGRAFSLVEIIDLARPGEVDRLRAELSASGQPGGQP
Ga0207702_119434473	3300026078	Corn Rhizosphere	GPQAASPRFEVHAETERIRLADGSDGGRRFALVEVIDLARPGEIERLRRELHE
Ga0209647_13076442	3300026319	Grasslands Soil	QAASSRFEVYAEAEPVRLADGSPGGRQFALAEVIDLARPGEAPRLREELQALGDVPA
Ga0209577_104694342	3300026552	Soil	VLRYVLAVGPHAASPRFEVLAEAGRVRLADGSDGGRRFALVEVIDLARPGEIDRLRRELD
Ga0208099_10183804	3300027096	Forest Soil	RAASPRFEVLTETGRVRLADGTDGGRQFALVEVIDLARPGELDRLRQELDGSADPA
Ga0209010_10186911	3300027370	Forest Soil	EAEPVLLADGSAGGRQFALAEVIDLANPGAADRLRAELAALPDRSR
Ga0209166_107118273	3300027857	Surface Soil	SPRFEVYQSAPVRLADGSDGGRRFSLAEVIDISLPGAAERLREELDRGP
Ga0209283_107619172	3300027875	Vadose Zone Soil	PRFEVLTETGRVRLADGTDGGRQFALVEVIDLARPGELDRLRQELDRSAEPR
Ga0209590_106825051	3300027882	Vadose Zone Soil	VLRYVLTVGPHAASPRFEVLAETGRVRLADGSDGGRRFDLVEVIDLARPGEASRLRRELDTG
Ga0209737_114196361	3300027904	Termite Gut	LPDRGSVLRYILALGPQAAGTRFEIWAETQPVRLADGSDGGRAFALAEVIDLARPGEAGRLSAELAGLATLNPRERP
Ga0222748_10328633	3300029701	Soil	FEVLTETGRVRLADGTDGGRQFALVEVIDLARPGELDRLRQELDGSADPA
Ga0307482_10816841	3300030730	Hardwood Forest Soil	GFEVYQSAPVRLADGSDGGRRFSLVQVIDLSRPGEADRLREELESDP
Ga0170824_1182906861	3300031231	Forest Soil	DRQAVLRYVLAVGPHAASPRFEVLTETGRVRLADGSDGGRQFALVEVIDLARPGEIDRLRRELDGPP
Ga0170818_1073468053	3300031474	Forest Soil	AVGPHAASPRFEVLAESGRVRLADGSDGGRQFALVEVIDLARPGEIDRLRRELDGPP
Ga0318516_106912741	3300031543	Soil	AASLRFEVYAEAEPVRLADGSDGGRQFALVEVIDLSRQGEAERLRQELSDDS
Ga0318534_102769723	3300031544	Soil	LRGASPRFEVYTESAPVVLSDGTQGGLVFSLVEVIDLARPGEIERLREELAEGEGT
Ga0318515_100193535	3300031572	Soil	RYLADRAAVLRYVLAIAPHAASTRFEVFAEAEPVRLADGSPGGRRFALAEVIDLARPGEADRLRAELETLDDQP
Ga0318515_104828561	3300031572	Soil	RYVLAIGSHAASPRFEVYESSPVRLADGSDGGRQFSLVEVIDLSQPGEAERLREELASGP
Ga0318555_104453161	3300031640	Soil	PDRQAVLRYVLAVGLKAASPRFEVFRESDPVVLSDGSPGGRAFSLVEIIDLARPGEVDRLRAELSTAGGPAARPPGGQQ
Ga0318542_106597642	3300031668	Soil	RFEVFAEAEPVRLADGSDGGRQFALVEVIDLSLQGEAERLRQELGDGP
Ga0318561_103549301	3300031679	Soil	AVLRYVLAVGPHAASPRFEVHADVGRVLLADGSDGGRRFALVEVIDLARPGEIERLRRELAAAGE
Ga0318574_107333932	3300031680	Soil	RAAVLRYILAIAPHAASSRFEVFAEAEPVRLADGSPGGRRFALAEVIDLARPGEADRLRRELGTLDDQP
Ga0318560_104065673	3300031682	Soil	YLPDRTAVLRYVLAVGSHAASPRFEVFAEAEPVRLADGSDGGRQFALVEVIDLSLQGEAERLRQELGDGP
Ga0306917_106951403	3300031719	Soil	RYLPGRQAVLRYVLGVGLSAASPRFEVFTESAPVVLRDGTPGGRAFSLVEVIDLARPGEIDRLRAELAEGERT
Ga0306917_109776061	3300031719	Soil	LPDRQAVLRYVLGVGLRAASPRFEVYTESAPVVLSDGTPGGRVFSLVEVIDLARPGEIERLREELAEGEGS
Ga0318500_101474131	3300031724	Soil	AVLRYVLAVGSHAASLRFEVYAEAEPVRLADGSDGGRQFALVEVIDLSRQGEAERLRQELSDDS
Ga0306918_102446501	3300031744	Soil	QAVLRYVLGVGLSAASPRFEVFTESAPVVLRDGTPGGRAFSLVEVIDLARPGEIDRLRAELAEGERT
Ga0318509_100992441	3300031768	Soil	YLPDRQAVLRYVLAVGPHAASPRFEVHADVGRVLLADGSDGGRRFALVEVIDLARPGEIERLRRELAAAGE
Ga0318521_108128881	3300031770	Soil	YLPDRQAVLRYVLAVGPHAASPRFEVHADVGRVLLADGSDGGRRFALVEVIDLARPGEIERLRRELAVAGE
Ga0318547_100179891	3300031781	Soil	QRYLADRGAVLRYVLAIAPHAASTRFEVFAEAEPVRLADGSPGGRRFALAEVIDLARPGEADRLRAELETLDDQP
Ga0318547_102553761	3300031781	Soil	LRYVLAVGPHAASPRFEVHAEAGRIMLADGSDGGRRFALVEVIDLARPGEIERLRRELAAAGE
Ga0318547_105725971	3300031781	Soil	GPHAASPRFEVHAEAGRVLLADGSDGGRRFALVEVIDLARPGEIERLRRELAAADE
Ga0318547_107457432	3300031781	Soil	ASPRFEVYESSPVRLADGSDGGRQFSLVEVIDFSLPGEADRLRAELSRDA
Ga0318547_109907081	3300031781	Soil	DRQAVLRYVLAVGLKAASPRFEVFCESDPVVLGDGSPGGRAFSLVEIIDLARPGEIDRLRAELSVAGQPGGQP
Ga0318552_102673733	3300031782	Soil	EHVPEHRLPDRQAVLRYVLAVGPHAASPRFEVHAEAGRVLLADGSDGGRRFALVEVIDLARPGEIERLRRELAAADE
Ga0318557_100486803	3300031795	Soil	VLAIAPHAASTRFEVFAEAEPVRLADGSPGGRRFALAEVIDLARPGEADRLRAELETLDDQP
Ga0318550_101271711	3300031797	Soil	QAVLRYVLAVGLKAASPRFEVFCESDPVVLGDGSPGGRAFSLVEIIDLARPGEIDRLRAELSVAGQPGGQP
Ga0318523_102144291	3300031798	Soil	RAAVLRYVLAIAPHAASTRFEVFAEAEPVRLADGSPGGRRFALAEVIDLARPGEADRLRRELTALGDDPA
Ga0318565_103768501	3300031799	Soil	VGLRAASPRFEVYTESAPVVLRDGTSGGLVFSLVEVIDLARPGEIERLREELAEGEGT
Ga0318497_105906422	3300031805	Soil	YLPDRQAVLRYVLAVGLKAASPRFEVFRESDPVVLSDGSPGGRAFSLVEIIDLARPGEVDRLRAELSAGGQPGGRP
Ga0318568_101921011	3300031819	Soil	RQAVLRYVLGVGLSAASPRFEVFTESAPVVLRDGTPGGRAFSLVEVIDLARPGEIDRLRAELAEGERT
Ga0318567_105116651	3300031821	Soil	LRYVLAVGLKAASPRFEVFCESDPVVLGDGSPGGRAFSLVEIIDLARPGEIDRLRAELSVAGQPGGQP
Ga0318567_106810672	3300031821	Soil	AVLRYVLAVGPHAASPRFEVLAETGRVRLADGSDGGRQFTLVEVIDLARPGEIDRLRRELGGTT
Ga0310917_108258812	3300031833	Soil	ADRGAVLRYVLAIAPHAASTRFEVFAEAEPVRLADGSPGGRRFALAEVIDLARPGEADRLRAELETLDDQP
Ga0318511_101872111	3300031845	Soil	SHPASPRFEVYESSPVRLADGSDGGRQFSLVEVIDFSLPGEADRLRAELSRDA
Ga0318512_105378203	3300031846	Soil	FEVFAEAEPVRLADGSDGGRRFALVEVIDLDRPGEAERLRQELSHGT
Ga0318512_106287302	3300031846	Soil	VGPYAASPRFEVHAEAGRVLLADGSDGGRRFALVEVIDLARPGEIERLRRELAAADE
Ga0306919_109692512	3300031879	Soil	EVFAEAEPVRLADGSPGGRRFALAEVIDLARPGEADRLRRELTALGDDPA
Ga0318536_106396212	3300031893	Soil	FEVFAEAEPVRLADGSPGGRRFALAEVIDLARPGEADRLRRELTALGDDPA
Ga0318522_101583423	3300031894	Soil	PDRQAVLRYVLAVGPHAASPRFEVHAEAGRVLLADGSDGGRRFALVEVIDLARPGEIERLRRELAAADE
Ga0318551_103297463	3300031896	Soil	VLRYVLAVGPHAASPRFEVLAETGRVRLADGSDGGRQFTLVEVIDLARPGEIDRLRRELGGTT
Ga0310913_110960092	3300031945	Soil	RRAVLRFVLAVGPQATSSRFEVLTETGRLRLADGSDGGRQFALVEVIDLARPGETERLRRELLADD
Ga0310910_105250134	3300031946	Soil	YVLAVGPHAASPRFEVHADVGRVLLADGSDGGRRFALVEVIDLARPGEIERLRRELAAAG
Ga0306922_100569886	3300032001	Soil	RFEVFAEAEPVRLADGSPGGRRFALAEVIDLARPGEADRLRAELETLDDQP
Ga0318559_101587381	3300032039	Soil	EVLRYVLAIAPHAASTRFEVFAETEPVRLADGSPGGRRFALAEVIDLARPGEADRLRAELETLDDQP
Ga0318575_100589695	3300032055	Soil	RFEVHADVGRVLLADGSDGGRQFALVEVIDLARPGEIERLHRELAEAHE
Ga0318513_100723771	3300032065	Soil	PDRQAVLRYVLAVGPHAASPRFEVHAEAGRVLLADGSDGGRRFALVEVIDLARPGEIERLRRELAAAGE
Ga0318514_102339851	3300032066	Soil	GVGLRAASPRFEVYTESAPVVLSDGTPGGRVFSLVEVIDLARPGEIERLRAALAEGEGS
Ga0318514_106588162	3300032066	Soil	ASVLRYVLAVGPYAASPRFEVLAETSRVRLADGSDGGRQFALVEVIDLARPGEIDRLRRELGRQDRAGPGR
Ga0318524_104502911	3300032067	Soil	YLPDRQAVLRYVLGVGLSAASPRFEVFTESAPVVLRDGTPGGRAFSLVEVIDLARPGEIDRLRAELAEGERT
Ga0326631_1176462	3300032072	Soil	QQRYLADRAAVLRYVLAIAPHAASTRFEVYTEAEPVLLADGSAGGRQFAFAEVIDLANPGEADRLRAELAALPDRSR
Ga0306924_109970501	3300032076	Soil	DRASVLRYVLAVGSHAASPRFEVFAEAEPVRLADGSDGGRQFSLVEVIDLSVPGEAGRLREELGDGQC
Ga0306920_1001389676	3300032261	Soil	AVLRSVLAVGPHAASPRFEVHADVGRVLLADGSDGGRRFALVEVIDLARPGEIERLRRELAAAGE
Ga0306920_1006686461	3300032261	Soil	LRAASPRFEVYTESAPVVLSDGTPGGRVFSLVEVIDLARPGEIERLREELAEGEGS
Ga0306920_1032170123	3300032261	Soil	PHAAGPRFEVFAEAEPVRLADGSDGGRRFALVEVIDLDRPGEAERLRQELSHGT
Ga0335078_101635515	3300032805	Soil	RRFELFAEAEPVRLADGSPGGRRFALAEVIDLDRPGEADRLREELASLRDAAT
Ga0335078_103389531	3300032805	Soil	YVLAIGPRSASTRFEVFAETAPVRLADGSAGGRSYSLVEVIDLSVAGERDRLTAELAALSAPPGPGSSG
Ga0335078_117756023	3300032805	Soil	PRFEVHAETGRVLLADGSDGGRRFALVEVIDLARPGEIERLRRELAAADE
Ga0335080_103140213	3300032828	Soil	ASQRFEVFAEGEPVRLADGTPGGRRFTLAEVIDLGRPGEADRLRRELEARRAGGGT
Ga0335081_111162723	3300032892	Soil	VLRFALAVGPQLASPRFEVLTETGRVRLADGSDGGRQFALAEVIDLAQPGEIDRLRRELLSDD
Ga0335081_123464242	3300032892	Soil	LRYVLAVGPHAASPRFEVLAETGRVRLADGSDGGRQFALVEVIDLARPGEVDRLRRELDT
Ga0335075_114787182	3300032896	Soil	VLAVAPYAASTRFEVYAEAEPVRLADGSPGGRQFALAEVIDFAQPGEADRLRAELAELHEPSP
Ga0335075_115732631	3300032896	Soil	RFEVFAEAEPVRLADGSPGGRRFALAEVIDLDRPGEADRLQAELAAMADPGEDRP
Ga0335077_101899336	3300033158	Soil	RRAVLRFVLAVGPQLASPRFEVLTETGRVRLADGSDGGRQFALAEVIDLAQPGEIDRLRRELLSDD
Ga0318519_110238321	3300033290	Soil	AAVLRYVLAIAPHAASSRFEVFAEAEPVRLADGSPGGRRFALAEVIDLARPGEADRLRRELGTLDDQP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F061066

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences