Metagenome / Metatranscriptome Family F061048

Overview

Basic Information

• Family ID: F061048
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 132
• Average Sequence Length: 47 residues
• Representative Sequence: MSLDLVALKDEQSAARNARPRRSLDLETESFVRVLPIRWRLFSIAALNA
• Number of Associated Samples: 120
• Number of Associated Scaffolds: 132

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 84.85 %
• % of genes near scaffold ends (potentially truncated): 99.24 %
• % of genes from short scaffolds (< 2000 bps): 89.39 %
• Associated GOLD sequencing projects: 116
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (99.242 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (21.970 % of family members)
• Environment Ontology (ENVO): Unclassified (27.273 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Soil (non-saline) (41.667 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 50.65%
  β-sheet: 0.00%
  Coil/Unstructured: 49.35%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF03480	DctP	83.33
PF00378	ECH_1	2.27
PF13561	adh_short_C2	1.52
PF00866	Ring_hydroxyl_B	1.52
PF03401	TctC	0.76
PF00106	adh_short	0.76
PF00121	TIM	0.76
PF07883	Cupin_2	0.76
PF16113	ECH_2	0.76
PF10397	ADSL_C	0.76
PF00903	Glyoxalase	0.76
PF01738	DLH	0.76

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG5517	3-phenylpropionate/cinnamic acid dioxygenase, small subunit	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.52
COG0149	Triosephosphate isomerase	Carbohydrate transport and metabolism [G]	0.76
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.76

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.24 %
Unclassified	root	N/A	0.76 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.24 %
Unclassified	root	N/A	0.76 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.24 %
Unclassified	root	N/A	0.76 %

Level 4

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	96.97 %
Unclassified	root	N/A	0.76 %

Level 5

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	20.45 %
Unclassified	root	N/A	0.76 %

Level 6

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4.55 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	4.55 %
Unclassified	root	N/A	0.76 %

Level 7

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.55 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1.52 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.76 %
Unclassified	root	N/A	0.76 %

Level 8

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.55 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	1.52 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.76 %
Unclassified	root	N/A	0.76 %

Level 9

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.55 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	1.52 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.76 %
Unclassified	root	N/A	0.76 %

Level 10

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.55 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1.52 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.76 %
Unclassified	root	N/A	0.76 %

Associated Scaffolds

Scaffold	Taxonomy	Length
2140918013|NODE_419806_length_1165_cov_8.813734	All Organisms → cellular organisms → Bacteria → Proteobacteria	1197
2170459003|FZ032L002FLMFG	All Organisms → cellular organisms → Bacteria → Proteobacteria	502
3300000550|F24TB_11385202	All Organisms → cellular organisms → Bacteria → Proteobacteria	1064
3300000651|AP72_2010_repI_A10DRAFT_1054321	All Organisms → cellular organisms → Bacteria → Proteobacteria	530
3300000893|AP72_2010_repI_A001DRAFT_1075370	All Organisms → cellular organisms → Bacteria → Proteobacteria	532
3300000953|JGI11615J12901_10357344	All Organisms → cellular organisms → Bacteria → Proteobacteria	962
3300001164|JGI11823J13286_1009309	All Organisms → cellular organisms → Bacteria → Proteobacteria	693
3300001225|SwM_113819	All Organisms → cellular organisms → Bacteria → Proteobacteria	510
3300004114|Ga0062593_101381460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	751
3300004479|Ga0062595_100747539	All Organisms → cellular organisms → Bacteria → Proteobacteria	795
3300004479|Ga0062595_101434741	All Organisms → cellular organisms → Bacteria → Proteobacteria	632
3300004629|Ga0008092_11347922	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1046
3300005332|Ga0066388_106094196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	609
3300005332|Ga0066388_106660582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	582
3300005366|Ga0070659_101225239	All Organisms → cellular organisms → Bacteria → Proteobacteria	664
3300005436|Ga0070713_100214710	All Organisms → cellular organisms → Bacteria → Proteobacteria	1743
3300005436|Ga0070713_100450094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1209
3300005444|Ga0070694_101726414	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	533
3300005447|Ga0066689_10174104	All Organisms → cellular organisms → Bacteria → Proteobacteria	1292
3300005540|Ga0066697_10514419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	677
3300005560|Ga0066670_10753605	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	590
3300005574|Ga0066694_10467793	All Organisms → cellular organisms → Bacteria → Proteobacteria	589
3300005764|Ga0066903_106839806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	592
3300006031|Ga0066651_10037145	All Organisms → cellular organisms → Bacteria → Proteobacteria	2218
3300006038|Ga0075365_10774768	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	677
3300006051|Ga0075364_11161154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	524
3300006186|Ga0075369_10466493	All Organisms → cellular organisms → Bacteria → Proteobacteria	599
3300006195|Ga0075366_10762137	All Organisms → cellular organisms → Bacteria → Proteobacteria	602
3300006605|Ga0074057_11896789	All Organisms → cellular organisms → Bacteria → Proteobacteria	711
3300006800|Ga0066660_11472533	All Organisms → cellular organisms → Bacteria → Proteobacteria	535
3300006846|Ga0075430_101158086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	637
3300006852|Ga0075433_10166799	All Organisms → cellular organisms → Bacteria → Proteobacteria	1960
3300006854|Ga0075425_101634750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	726
3300006881|Ga0068865_100060777	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2646
3300009012|Ga0066710_102720603	All Organisms → cellular organisms → Bacteria → Proteobacteria	704
3300009157|Ga0105092_10677878	All Organisms → cellular organisms → Bacteria → Proteobacteria	598
3300009792|Ga0126374_11323273	All Organisms → cellular organisms → Bacteria → Proteobacteria	583
3300009792|Ga0126374_11783775	All Organisms → cellular organisms → Bacteria → Proteobacteria	514
3300010046|Ga0126384_10462350	All Organisms → cellular organisms → Bacteria → Proteobacteria	1086
3300010046|Ga0126384_11380127	All Organisms → cellular organisms → Bacteria → Proteobacteria	656
3300010159|Ga0099796_10559156	All Organisms → cellular organisms → Bacteria → Proteobacteria	514
3300010358|Ga0126370_10313649	All Organisms → cellular organisms → Bacteria → Proteobacteria	1250
3300010360|Ga0126372_12767219	All Organisms → cellular organisms → Bacteria → Proteobacteria	542
3300010398|Ga0126383_11566772	All Organisms → cellular organisms → Bacteria → Proteobacteria	748
3300010868|Ga0124844_1097789	All Organisms → cellular organisms → Bacteria → Proteobacteria	1113
3300011119|Ga0105246_10904298	All Organisms → cellular organisms → Bacteria → Proteobacteria	792
3300012189|Ga0137388_11806889	All Organisms → cellular organisms → Bacteria → Proteobacteria	543
3300012209|Ga0137379_11300623	All Organisms → cellular organisms → Bacteria → Proteobacteria	633
3300012349|Ga0137387_11222848	All Organisms → cellular organisms → Bacteria → Proteobacteria	529
3300012356|Ga0137371_10065140	All Organisms → cellular organisms → Bacteria → Proteobacteria	2821
3300012357|Ga0137384_11491981	All Organisms → cellular organisms → Bacteria → Proteobacteria	525
3300012363|Ga0137390_10480195	All Organisms → cellular organisms → Bacteria → Proteobacteria	1218
3300012363|Ga0137390_11027879	All Organisms → cellular organisms → Bacteria → Proteobacteria	775
3300012897|Ga0157285_10044560	All Organisms → cellular organisms → Bacteria → Proteobacteria	1058
3300012909|Ga0157290_10116928	All Organisms → cellular organisms → Bacteria → Proteobacteria	811
3300012971|Ga0126369_11940921	All Organisms → cellular organisms → Bacteria → Proteobacteria	677
3300014150|Ga0134081_10033371	All Organisms → cellular organisms → Bacteria → Proteobacteria	1498
3300015373|Ga0132257_102002373	All Organisms → cellular organisms → Bacteria → Proteobacteria	747
3300015374|Ga0132255_104884363	All Organisms → cellular organisms → Bacteria → Proteobacteria	568
3300016294|Ga0182041_10112644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2025
3300016422|Ga0182039_10064661	All Organisms → cellular organisms → Bacteria → Proteobacteria	2556
3300017973|Ga0187780_11191922	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	558
3300018000|Ga0184604_10124945	All Organisms → cellular organisms → Bacteria → Proteobacteria	825
3300018053|Ga0184626_10399906	All Organisms → cellular organisms → Bacteria → Proteobacteria	549
3300018054|Ga0184621_10228199	All Organisms → cellular organisms → Bacteria → Proteobacteria	666
3300018078|Ga0184612_10337808	All Organisms → cellular organisms → Bacteria → Proteobacteria	766
3300021168|Ga0210406_10891607	All Organisms → cellular organisms → Bacteria → Proteobacteria	670
3300021171|Ga0210405_10238078	All Organisms → cellular organisms → Bacteria → Proteobacteria	1441
3300021968|Ga0193698_1017673	All Organisms → cellular organisms → Bacteria → Proteobacteria	922
3300022756|Ga0222622_10259945	All Organisms → cellular organisms → Bacteria → Proteobacteria	1179
3300023069|Ga0247751_1014582	All Organisms → cellular organisms → Bacteria → Proteobacteria	1196
3300023078|Ga0247756_1131729	All Organisms → cellular organisms → Bacteria → Proteobacteria	502
3300025908|Ga0207643_10216435	All Organisms → cellular organisms → Bacteria	1171
3300025910|Ga0207684_10905903	All Organisms → cellular organisms → Bacteria → Proteobacteria	741
3300025914|Ga0207671_10474724	All Organisms → cellular organisms → Bacteria → Proteobacteria	997
3300025931|Ga0207644_11187325	All Organisms → cellular organisms → Bacteria → Proteobacteria	641
3300025932|Ga0207690_10679735	All Organisms → cellular organisms → Bacteria → Proteobacteria	845
3300025932|Ga0207690_11057782	All Organisms → cellular organisms → Bacteria → Proteobacteria	676
3300025942|Ga0207689_11742598	All Organisms → cellular organisms → Bacteria → Proteobacteria	515
3300026023|Ga0207677_10047147	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2891
3300026095|Ga0207676_11468959	All Organisms → cellular organisms → Bacteria → Proteobacteria	678
3300026542|Ga0209805_1042288	All Organisms → cellular organisms → Bacteria → Proteobacteria	2300
3300026547|Ga0209156_10341274	Not Available	654
3300026552|Ga0209577_10783685	All Organisms → cellular organisms → Bacteria → Proteobacteria	533
3300027388|Ga0208995_1055626	All Organisms → cellular organisms → Bacteria → Proteobacteria	696
3300027875|Ga0209283_10246852	All Organisms → cellular organisms → Bacteria → Proteobacteria	1184
3300027909|Ga0209382_10080830	All Organisms → cellular organisms → Bacteria → Proteobacteria	3831
3300028381|Ga0268264_11156872	All Organisms → cellular organisms → Bacteria → Proteobacteria	783
3300028814|Ga0307302_10630608	All Organisms → cellular organisms → Bacteria → Proteobacteria	533
3300028828|Ga0307312_10127187	All Organisms → cellular organisms → Bacteria → Proteobacteria	1601
3300028876|Ga0307286_10090635	All Organisms → cellular organisms → Bacteria → Proteobacteria	1067
3300031543|Ga0318516_10712970	All Organisms → cellular organisms → Bacteria → Proteobacteria	569
3300031561|Ga0318528_10564007	All Organisms → cellular organisms → Bacteria	611
3300031668|Ga0318542_10627971	All Organisms → cellular organisms → Bacteria → Proteobacteria	561
3300031713|Ga0318496_10023088	All Organisms → cellular organisms → Bacteria → Proteobacteria	3094
3300031719|Ga0306917_10758374	All Organisms → cellular organisms → Bacteria	762
3300031720|Ga0307469_12121005	All Organisms → cellular organisms → Bacteria → Proteobacteria	547
3300031723|Ga0318493_10813421	All Organisms → cellular organisms → Bacteria → Proteobacteria	527
3300031724|Ga0318500_10042893	All Organisms → cellular organisms → Bacteria → Proteobacteria	1884
3300031744|Ga0306918_10116808	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1926
3300031751|Ga0318494_10812110	All Organisms → cellular organisms → Bacteria → Proteobacteria	548
3300031764|Ga0318535_10464667	All Organisms → cellular organisms → Bacteria → Proteobacteria	563
3300031768|Ga0318509_10604871	All Organisms → cellular organisms → Bacteria → Proteobacteria	610
3300031779|Ga0318566_10143598	All Organisms → cellular organisms → Bacteria → Proteobacteria	1182
3300031781|Ga0318547_10901463	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	552
3300031796|Ga0318576_10511310	All Organisms → cellular organisms → Bacteria → Proteobacteria	567
3300031845|Ga0318511_10474631	All Organisms → cellular organisms → Bacteria → Proteobacteria	577
3300031859|Ga0318527_10512708	All Organisms → cellular organisms → Bacteria → Proteobacteria	511
3300031896|Ga0318551_10208798	All Organisms → cellular organisms → Bacteria → Proteobacteria	1082
3300031945|Ga0310913_10542748	All Organisms → cellular organisms → Bacteria → Proteobacteria	825
3300031947|Ga0310909_11135788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	634
3300032025|Ga0318507_10025156	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2162
3300032044|Ga0318558_10074559	All Organisms → cellular organisms → Bacteria → Proteobacteria	1549
3300032054|Ga0318570_10110013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1210
3300032059|Ga0318533_10398747	All Organisms → cellular organisms → Bacteria → Proteobacteria	1005
3300032065|Ga0318513_10081679	All Organisms → cellular organisms → Bacteria → Proteobacteria	1492
3300032065|Ga0318513_10346101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	724
3300032076|Ga0306924_10005495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	12496
3300032076|Ga0306924_11070967	All Organisms → cellular organisms → Bacteria → Proteobacteria	880
3300032076|Ga0306924_11412873	All Organisms → cellular organisms → Bacteria → Proteobacteria	742
3300032089|Ga0318525_10004783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	5692
3300032089|Ga0318525_10214860	All Organisms → cellular organisms → Bacteria → Proteobacteria	988
3300032159|Ga0268251_10338749	All Organisms → cellular organisms → Bacteria → Proteobacteria	635
3300032211|Ga0310896_10773564	All Organisms → cellular organisms → Bacteria → Proteobacteria	548
3300032261|Ga0306920_102013634	All Organisms → cellular organisms → Bacteria → Proteobacteria	808
3300032261|Ga0306920_103655958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	565
3300032955|Ga0335076_11623436	All Organisms → cellular organisms → Bacteria → Proteobacteria	535
3300033289|Ga0310914_10006355	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8448
3300033290|Ga0318519_10187530	All Organisms → cellular organisms → Bacteria → Proteobacteria	1174
3300034147|Ga0364925_0150708	All Organisms → cellular organisms → Bacteria → Proteobacteria	844
3300034149|Ga0364929_0113894	All Organisms → cellular organisms → Bacteria → Proteobacteria	860
3300034151|Ga0364935_0008312	All Organisms → cellular organisms → Bacteria → Proteobacteria	2582

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	81.82%
Host-Associated	Host-Associated	18.18%

Class

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.27%
Plants	Host-Associated → Plants	18.18%
Aquatic	Environmental → Aquatic	4.55%

Category

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	74.24%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.58%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.82%
Sediment	Environmental → Aquatic → Sediment	3.79%
Roots	Host-Associated → Plants → Roots	3.03%
Floodplain	Environmental → Terrestrial → Floodplain	2.27%
Freshwater	Environmental → Aquatic → Freshwater	0.76%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.76%
Phylloplane	Host-Associated → Plants → Phylloplane	0.76%

Type

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	64.39%
Loam	Environmental → Terrestrial → Soil → Loam	8.33%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.30%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.79%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	3.03%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.03%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	2.27%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.52%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.52%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.76%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	0.76%

Subtype

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	31.06%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.94%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.30%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.79%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.03%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.03%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	3.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.03%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	2.27%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.52%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.52%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.76%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.76%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.76%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.76%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	0.76%

Habitat

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.33%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.06%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.55%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.03%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.03%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.03%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.03%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	3.03%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.27%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	2.27%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.27%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.27%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.52%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.52%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.52%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.76%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.76%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.76%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.76%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.76%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.76%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.76%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	0.76%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.76%

Associated Samples

Taxon OID	Sample Name	Habitat Type
2140918013	Soil microbial communities from Great Prairies - Iowa soil (MSU Assemblies)	Environmental
2170459003	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm	Environmental
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental
3300000651	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A10	Environmental
3300000893	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A001	Environmental
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental
3300001164	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1	Environmental
3300001225	Switchgrass rhizosphere microbial communities from Knoxville, Tennessee, USA - 11_joined	Host-Associated
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental
3300004629	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome P72I A01 (Metagenome Metatranscriptome)	Environmental
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated
3300006051	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4	Host-Associated
3300006186	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4	Host-Associated
3300006195	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1	Host-Associated
3300006605	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)	Environmental
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental
3300012909	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1	Environmental
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated
3300015374	Col-0 rhizosphere combined assembly	Host-Associated
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental
3300021968	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c1	Environmental
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental
3300023069	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S049-202B-5	Environmental
3300023078	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L066-202C-4	Environmental
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental
3300027388	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_O2 (SPAdes)	Environmental
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental
3300034147	Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17	Environmental
3300034149	Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17	Environmental
3300034151	Sediment microbial communities from East River floodplain, Colorado, United States - 2_s17	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Iowa-Corn-GraphCirc_00115480	2140918013	Soil	MTFDLVALKDEQTAARNARPRRSLDLETESFVRVLPIRWRLLLIAALNATVAV
E4A_08455970	2170459003	Grass Soil	MSLDLVALKDEPSATRNARPRRSLDLETESVVRVLPI
F24TB_113852022	3300000550	Soil	MSLDLVALKDEPSAARTARPRRSLDQETQSVVRALPIRWRLLLIAALN
AP72_2010_repI_A10DRAFT_10543211	3300000651	Forest Soil	MSFDLVALKDERTPSARPRRSLDLETESFVRALPIRWR
AP72_2010_repI_A001DRAFT_10753702	3300000893	Forest Soil	MSFDLVALKDERTPSARPRRSLDLETESFVRALPI
JGI11615J12901_103573442	3300000953	Soil	MTFDLVALKDEQTAARNARPRRSLDLETESFVRVLPIRWRLLLIAAL
JGI11823J13286_10093092	3300001164	Forest Soil	MTFDLVALKDEQTAARNARPRRSLDLETESFVRVLPI
SwM_1138192	3300001225	Switchgrass Rhizosphere	MSLDLVALKDEPSTTRNARPRRSLDLETESVVRVLPIRWRLFS
Ga0062593_1013814601	3300004114	Soil	VSFDLVAINHELPTAPGARRRSLDLETESFVRALPIRWRLFLLAALNGAVAVILA
Ga0062595_1007475392	3300004479	Soil	MSLDLLALKEEQSRTPTARQRRSLDLETQSVVRVLPIRWRL
Ga0062595_1014347412	3300004479	Soil	MSLDLLALKEEQSAAPTGRQRRSLDLETQSVVRVLPIRWRLLSI
Ga0008092_113479221	3300004629	Tropical Rainforest Soil	MSLDLVALKDEQSATRNARPRRSLDLETESVVRVLPIRWRLFLIAALNASVAFIL
Ga0066388_1060941962	3300005332	Tropical Forest Soil	MSFDLVALAQDQPSPPRARARRNLGRETEGFVRVLPIRWRLVSIAALNLIVAFIL
Ga0066388_1066605822	3300005332	Tropical Forest Soil	MTLDLLALRDGRTAAARPRRSLDLETEGVVRAVPIRWRLLSLAALNAA
Ga0070659_1012252391	3300005366	Corn Rhizosphere	MSLDLLALKEEQSAAPTGRQRRSLDLETQSVVRVLPIRWRLLSIA
Ga0070713_1002147103	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MSLDLVALRDEPSSSARSRAGRNFDLGTQSFVRVLPISWRLLAIAALNAAVAAILAL
Ga0070713_1004500942	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MSFDLVALKDEPPAARQVRPRRSLDLETESFVRALPIRWRLLSIAALNAT
Ga0070694_1017264142	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MTFDLVALKDEQAAARGARPRRSLDLETESFVRVLPIRWRLLLIAALNATVAVILAT
Ga0066689_101741041	3300005447	Soil	MSLDLVALKDEQSATRNARPRRSLDLETESVVRVLPIRWRL
Ga0066697_105144191	3300005540	Soil	MSLDLVALKDEPSATRNARPRRSLDLETESVVRVLPIRWRLFSIAALNAAVAFILA
Ga0066670_107536052	3300005560	Soil	MSLDLLALKEEQPRAPTARQRRSLDLETQSVVRVLPIRWRLLSIAALNAT
Ga0066694_104677931	3300005574	Soil	MSLDLLALKEEQPRAPTARQRRSLDLETQSVVRVL
Ga0066903_1068398062	3300005764	Tropical Forest Soil	MSLDLVALKDEPSATRNARPRRSLDLETESVVRVLPIRWRLFSIAAL
Ga0066651_100371451	3300006031	Soil	MSLDLLALKEEQPRAPTARQRRSLDLETQSVVRVLPIRWRLLSIAALNATVA
Ga0075365_107747681	3300006038	Populus Endosphere	MSFDLVALKDEPAGRTARPRRSLDLETESFVRALPIRWRLLSIAALNATVAV
Ga0075364_111611541	3300006051	Populus Endosphere	MSFDLVALKDEPPAARSARPRRSLDLETESFVRVLPIRWRLLSIAALNAT
Ga0075369_104664931	3300006186	Populus Endosphere	MTFDLVALKDEQAAARGARPRRSLDLETESFVRVLPIRWRLLLI
Ga0075366_107621372	3300006195	Populus Endosphere	MTFDLVALKDEQAAARGARPRRSLDLETESFVRVLPIRWRLL
Ga0074057_118967892	3300006605	Soil	MSLDLVALKDEQSAARNARPRRSLDLETESVVRVLPI
Ga0066660_114725332	3300006800	Soil	MSLDLLALKEEQPRAPTARQRRSLDLETQSVVRVLPI
Ga0075430_1011580862	3300006846	Populus Rhizosphere	MSLDLVALKDEPSVARTARPRRSLDQETQSVVRALPIRWRLLLIAALNATVAVILAAL
Ga0075433_101667993	3300006852	Populus Rhizosphere	MSLDLVALKDEPSATRNARPRRSLDLETESVVRVLPIRWRLFSIA
Ga0075425_1016347501	3300006854	Populus Rhizosphere	MTFDLVALKDEQAAARGARPRRSLDLETESFVRVLPIRWRLLLIAGLNATVAVIL
Ga0068865_1000607775	3300006881	Miscanthus Rhizosphere	MTFDLVALKDEQAAARGARPRRSLDLETESFVRVLPIRWRL
Ga0066710_1027206031	3300009012	Grasslands Soil	VSFDLVAINQELPTAPVAQTMRSLDLETESFVRALTLRWRLFLL
Ga0105092_106778781	3300009157	Freshwater Sediment	MSFDLVALKDEQPVARSARPRRSLDLETESFVRVLPIRWRLLS
Ga0126374_113232732	3300009792	Tropical Forest Soil	MSLDLVALKDEQSATRNARPRRSLDLETESVVRVLPIRWRLFFIAALNAVVAFI
Ga0126374_117837751	3300009792	Tropical Forest Soil	MSLDLLALKEQQSAARTARQRRSLDLETQSVVRVLPIRW
Ga0126384_104623501	3300010046	Tropical Forest Soil	MSLDLVALKDEQSAARNARPRRSLDLETESVVRVLPIRWRLFSIAALNA
Ga0126384_113801271	3300010046	Tropical Forest Soil	MSLDLVALKDEQSATRNARPRRSLDLETESVVRVLPIRWRLFFIAALN
Ga0099796_105591562	3300010159	Vadose Zone Soil	MSFDLVALKEERSPSARPRRSLDLETESFVRALPIRWRLLSIAALNATV
Ga0126370_103136491	3300010358	Tropical Forest Soil	MSFDLIALKEERTPSARPRRSLDLETESFVRVLPIRWRLISIAALNLIVA
Ga0126372_127672192	3300010360	Tropical Forest Soil	MTVDLIALKEQQSAARPVRPRRSLDQETQSVVRTLPIRWRLLLIAALNA
Ga0126383_115667721	3300010398	Tropical Forest Soil	MSLDLLALKDEQSAASTARPRRSLDQETQSVVRVLPIRWRLLLIAALNATV
Ga0124844_10977891	3300010868	Tropical Forest Soil	MSLDLLALKEEQSAAPTARQRRSLDLETQSVVRVLPIRWRLLSIAALNATVAII
Ga0105246_109042981	3300011119	Miscanthus Rhizosphere	MTFDLVALKDEQTAARNARPRRSLDLETESFVRVLPIRWRLLLIA
Ga0137388_118068892	3300012189	Vadose Zone Soil	VSFDLVAINHELPTAPSARTRRSLDLETESFVRALPIRWRLFLLAALN
Ga0137379_113006231	3300012209	Vadose Zone Soil	VSFDLVAINHELPTAPDARPRRSLDLETESFVRALPIRWRLFLLAALNG
Ga0137387_112228481	3300012349	Vadose Zone Soil	MSFDLIALKEESSALPRARPQRSVDLATQTLVRVLPIRWRLFSIAALNATVAV
Ga0137371_100651401	3300012356	Vadose Zone Soil	MSLDLVALKDEPSAARTARPRRSLDQETQSVVRALPIRWRL
Ga0137384_114919811	3300012357	Vadose Zone Soil	MSLDLVALKDEPSATRNARPRRSLDLETESVVRVLPIRWRLF
Ga0137390_104801951	3300012363	Vadose Zone Soil	MSLDLIALKDESATLPRAGPRQSVDLATQTVVRLLPIR
Ga0137390_110278792	3300012363	Vadose Zone Soil	MSFDLVALKEESSALPRAGPRRSVDLATQTFVRVLPIRWRLFSIAALNATVAVILALLIC
Ga0157285_100445601	3300012897	Soil	MTFDLVALKDEQAAARGARQRRSLDLETESFVRVLPIRWRLLLI
Ga0157290_101169281	3300012909	Soil	MTFDLVALKDEQAAARGARPRRSLDLETESFVRVLPIRWRLLLIAALNATVAVIL
Ga0126369_119409212	3300012971	Tropical Forest Soil	MSFDLVALKDERTPSARPRRSLDLETESFVRVLPIRWRLFSI
Ga0134081_100333713	3300014150	Grasslands Soil	MTVDLIALKEQQSAARPARSRRSLDQETQSVLRVLPIRWRLLLIAALNVVVAS
Ga0132257_1020023731	3300015373	Arabidopsis Rhizosphere	MSFDLVALKDGPPAAPSARPRRSLDLETESFVRVLPIRWRL
Ga0132255_1048843632	3300015374	Arabidopsis Rhizosphere	MSFDLVALKEERSPSARPRRSLDLETESYVRTLPIRWRLISIAA
Ga0182041_101126441	3300016294	Soil	MSFDLIALKDESSVLQRSRPRRSVDLATQTLVRVLPIRWRLFCIA
Ga0182039_100646611	3300016422	Soil	MSLDLVALKDEQPAARNARPRRSLDLETESVVRVLPIRWRLFSIAALNAAVAF
Ga0187780_111919222	3300017973	Tropical Peatland	MSFDLIALRQEPAALQLARQRRSVDLATQTLVRLLPIRWRLFSIAALN
Ga0184604_101249452	3300018000	Groundwater Sediment	MTFDLVALKDEQAAARGARPRRSLDLETESFVRVLPIRWRLLLIAALN
Ga0184626_103999061	3300018053	Groundwater Sediment	MNFDLVALKDERAAAPGARPRRSLDLETESVVRVL
Ga0184621_102281991	3300018054	Groundwater Sediment	VSFDLVAISHEQQAAPPARPRRSLDIETESFVRALPIRWRL
Ga0184612_103378082	3300018078	Groundwater Sediment	VSFDLVAISHEQQAAPPARPRRSLDIETESFVRALPIRWRLPLLALLNLAVAVILA
Ga0210406_108916072	3300021168	Soil	MSLDLIALREQPSALPRATRSVDLATQTLVRLLPI
Ga0210405_102380782	3300021171	Soil	MSFDLIALKDELSALSRPRRTVDIATQTLLRVLPIRWRLFAIAALNATVAV
Ga0193698_10176731	3300021968	Soil	MTFDLVALKDEQAAARSARPRRSLDLETESFVRVLPIRWRLLSIAALNATVAV
Ga0222622_102599451	3300022756	Groundwater Sediment	MTFDLVALKNEQAAARSARPRRSLDLETESFVRVLPIRWRLLSIAALNA
Ga0247751_10145821	3300023069	Soil	MTFDLVALKDEQTAARNARPRRSLDLETESFVRVLPIRWR
Ga0247756_11317291	3300023078	Plant Litter	MTFDLVALKDEQAAARGARPRRSLDLETESFVRVLPIRWRLLLIAAL
Ga0207643_102164352	3300025908	Miscanthus Rhizosphere	MTFDLVALKDEQTAARNARPRRSLDLETESFVRVLPIRWRLLLIAALNATVA
Ga0207684_109059031	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MSLDLVAFKDEPSATRNARPRRSLDLETESVVRVLPIRWRLF
Ga0207671_104747242	3300025914	Corn Rhizosphere	MTFDLVALKDEQAAARGARPRRSLDLETESFVRVLPIRWRLLLIAALNARVQAIVAQLGASRVTAFA
Ga0207644_111873252	3300025931	Switchgrass Rhizosphere	MTFDLVALKDEQTAARNARPRRSLDLETESFVRVLPIR
Ga0207690_106797351	3300025932	Corn Rhizosphere	MTFDLVALKDEQTAARNARPRRSLDLETESFVRVLPIRWRLLLIAALDATVAVIL
Ga0207690_110577822	3300025932	Corn Rhizosphere	MSLDLLALKEEQSAAPTGRQRRSLDLETQSVVRVLPIRWRLLSIAALNA
Ga0207689_117425983	3300025942	Miscanthus Rhizosphere	MSLDLLALKEEQSAAPTGRQRRSLDLETQSVVRVLPIRWRLLSIAALNATVAIILAALI
Ga0207677_100471471	3300026023	Miscanthus Rhizosphere	MTFDLVALKDEQAAARGARPRRSLDLETESFVRVLPIRWRLLLIAALNA
Ga0207676_114689592	3300026095	Switchgrass Rhizosphere	MTFDLVALKDEQTAARNARPRRSLDLETESFVRVLPIRWRLLLIAALNA
Ga0209805_10422883	3300026542	Soil	MTVDLVALKEQESAARPARSRRSLDQETQSVLRVLPIRWRLLLIAALNVVVAS
Ga0209156_103412742	3300026547	Soil	MNLDLLTLKHKGSAATGARPRRSLDLETEGFIRALPIRWRVLLIAALNATVAVILA
Ga0209577_107836851	3300026552	Soil	MSLDLVALKDEPSATRNARPRRSLDLETESVVRVLPIRWRLFSIAALNAA
Ga0208995_10556261	3300027388	Forest Soil	MSFDLVALKEERSPSARPRRSLDLETESFVRALPIRWRLLSIAA
Ga0209283_102468521	3300027875	Vadose Zone Soil	MSFDLVAFEEERAPHARPRRSLDLETESVVRVLPIRWRLLSI
Ga0209382_100808301	3300027909	Populus Rhizosphere	MSLDLVALKDEPSVARTARPRRSLDQETQSVVRALP
Ga0268264_111568721	3300028381	Switchgrass Rhizosphere	MSLDLVALRDEPSSSARSRAGRNFDLGTQSFVRVLPISWRLLAIAALNAAVAAILALIIW
Ga0307302_106306081	3300028814	Soil	VSFDLVAINHELPAAPGARTRRSLDLETESFVRALPIR
Ga0307312_101271871	3300028828	Soil	MSLDLLALKEQQPTAPTARQRRRLDLETQSFVRVLPIRWRLFSIAALNATVAI
Ga0307286_100906351	3300028876	Soil	MSFDLVALKEERSPSARPRRSLDLETESFVRALPIRWRLFLLAALNGAVAVI
Ga0318516_107129701	3300031543	Soil	MSLDLLALKNEQSAASTTRPRRSLDQETQSVVRVLPIRWR
Ga0318528_105640072	3300031561	Soil	MSLDLIALREQPSALPRATRSVDLATQTLVRLLPIRWRLFSIAALNATVAIVLA
Ga0318542_106279711	3300031668	Soil	MSLDLLALKNEQSAASTTRPRRSLDQETQSVVRVLPIRWRLLL
Ga0318496_100230884	3300031713	Soil	MSLDLVALKDEQSAARTARPRRSLDLETESFVRVL
Ga0306917_107583741	3300031719	Soil	MSLDLIALREQPSALPRATRSVDLATQTLVRLLPIRWRLFSIAALNATVAIILA
Ga0307469_121210051	3300031720	Hardwood Forest Soil	MSFDLVAFEEERAPHARPRRSLDLETESVVRVLPIRWRLLSIAALNATVAVIL
Ga0318493_108134212	3300031723	Soil	MSFDLIALKEEASALTRASPRRSVDLATQTLVRVLPIRWRLFC
Ga0318500_100428933	3300031724	Soil	MSLDLVALKDEQPAARNARPRRSLDLETESVVRVLPIRWRLFSIAALN
Ga0306918_101168083	3300031744	Soil	MSLDLVALKDEQSATRNARPRRSLDLETESVVRVL
Ga0318494_108121102	3300031751	Soil	MSFDLVALKDGPPAAPSARPRRSLDLETESFVRVLPIR
Ga0318535_104646672	3300031764	Soil	MSLDLLALKNEQSAASTTRPRRSLDQETQSVVRVLPIRWRLLLIAALNATVAIIL
Ga0318509_106048712	3300031768	Soil	MSLDLVALKDEQSATRNARPRRSLDLETESVVRVLPIRWRLFLIAALNASVAFILAAFIW
Ga0318566_101435981	3300031779	Soil	MSLDLVALKDEQSATRNARPRRSLDLETESVVRVLPIRWRLLFIA
Ga0318547_109014631	3300031781	Soil	MSFDLIALRQEPAALQLARQRRSVDLATQTLVRLLPIRWRLFSIAALNATV
Ga0318576_105113102	3300031796	Soil	MSLDLVALKDEQSAARTARPRRSLDLETESFVRVLPIRWRLFSIAALNAAVAFIL
Ga0318511_104746312	3300031845	Soil	MSLDLVALKDEQSATRNARPRRSLDLETESVVRVLPIRWRLFLIAALNA
Ga0318527_105127081	3300031859	Soil	MSLDLVALKDEQSAARTARPRRSLDLETESFVRVLPIRWR
Ga0318551_102087981	3300031896	Soil	MSFDLIALKDESSVLQRSRPRRSVDLATQTLVRVLPIRWRLFCIAALNATVAVILALLIW
Ga0310913_105427482	3300031945	Soil	MSFDLIALKEEASALTRASPRRSVDLATQTLVRVLPIRWRLFCIAALNATVAVILAL
Ga0310909_111357883	3300031947	Soil	MSFDLIALRQEPAALQLARQRRSVDLATQTLVRLLPIRWRL
Ga0318507_100251561	3300032025	Soil	MSFDLIALKDESSVLQRSRPRRSVDLATQTLVRVLPIRWRLFCIAALNATVAV
Ga0318558_100745593	3300032044	Soil	MSFDLIALKDESSVLQRSRPRRSVDLATQTLVRVLPIRWRLFCIAALN
Ga0318570_101100131	3300032054	Soil	MSFDLIALRQEPAALQLARQRRSVDLATQTLVRLLPIRWRLFSIAALNA
Ga0318533_103987471	3300032059	Soil	MSLDLVALKDEQSAARTARPRRSLDLETESFVRVLPIRWRLFSIAALNAAVAFILAAF
Ga0318513_100816791	3300032065	Soil	MSLDLVALKDEQPAARNARPRRSLDLETESVVRVLPI
Ga0318513_103461011	3300032065	Soil	MSFDLIALRQEPAALQLARQRRSVDLATQTLVRLLPIRWRLFSIAALNATVAVILAL
Ga0306924_1000549513	3300032076	Soil	MSFDLIALKEEASALTRASPRRSVDLATQTLVRVLPIRWRLFCIAALNATVA
Ga0306924_110709671	3300032076	Soil	MSLDLVALKDEQSAARNARPRRSLDLETESFVRVLPIRWRLFSIAALNA
Ga0306924_114128732	3300032076	Soil	MSLDLIALREQPSALPRATRSVDLATQTLVRLLPIRWRL
Ga0318525_100047837	3300032089	Soil	MSLDLVALKDEQSATRNARPRRSLDLETESAVRVLPIRWRLFLIAALNA
Ga0318525_102148602	3300032089	Soil	MSLDLVALKDEQSATRNARPRRSLDLETESVVRVLPIRWRLFF
Ga0268251_103387491	3300032159	Agave	MSFDLVALKDEPPAARQVRPRRSLDLETESFVRAL
Ga0310896_107735641	3300032211	Soil	MTFDLVALKDEQAAARGARPRRSLDLETESFVRVLPIRWRLLLIAALNAT
Ga0306920_1020136341	3300032261	Soil	MSLDLVALKDEQSAARTARPRRSLDLETESFVRVLPIRWRLFSIAALNAA
Ga0306920_1036559581	3300032261	Soil	MSFDLIALRQEPAALQLARQRRSVDLATQTLVRLLPIRWRLFSIAALNAT
Ga0335076_116234362	3300032955	Soil	MSFDLVALKDESSVLQRSRPRRSVDLATQTLVRVLPIRWRLFCIAALNATVAVILALLIW
Ga0310914_100063551	3300033289	Soil	MSLDLVALKDEQSATRNARPRRSLDLETESVVRVLPIRWRLFLIAALNASV
Ga0318519_101875301	3300033290	Soil	MSLDLVALKDEQSATRNARPRRSLDLETESVVRVLPIRWRLFLIA
Ga0364925_0150708_3_149	3300034147	Sediment	MSFDLIALKDEASALPRARPRRSVDLATQALVRGLPIRWRLFSIAALNA
Ga0364929_0113894_2_142	3300034149	Sediment	MSFDLIALKDEASALPRARPRRSVDLATQALVRGLPIRWRLFSIAAL
Ga0364935_0008312_1_153	3300034151	Sediment	MTFDLVALKDEQAAARGARPRRSLDLETESFVRVLPIRWRLLLIAALNATV