Metagenome / Metatranscriptome Family F061032

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F061032
Family Type	Metagenome / Metatranscriptome
Number of Sequences	132
Average Sequence Length	68 residues
Representative Sequence	VLGEEEAVVLEVKPFDLHGVRYYDLAVGFPDRSVQQARLGAESVPDDLEKGDRVLATRVANMVISVRRP
Number of Associated Samples	94
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	56.82 %
% of genes near scaffold ends (potentially truncated)	25.00 %
% of genes from short scaffolds (< 2000 bps)	81.82 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.78

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (86.364 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (36.364 % of family members)
Environment Ontology (ENVO)	Unclassified (33.333 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.242 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 3.09% β-sheet: 45.36% Coil/Unstructured: 51.55%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.78
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.78
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SCOP family	SCOP domain	Representative PDB	TM-score
b.40.4.3: Nucleic acid-binding proteins	d1x3ea_	1x3e	0.75
b.40.4.3: Nucleic acid-binding proteins	d1x3ea_	1x3e	0.75
b.40.4.0: Nucleic acid-binding proteins	d2fxqa_	2fxq	0.73
b.40.4.0: Nucleic acid-binding proteins	d2vw9a_	2vw9	0.73
b.40.4.0: Nucleic acid-binding proteins	d4dama1	4dam	0.73
b.40.4.3: Nucleic acid-binding proteins	d5yuoa_	5yuo	0.73
b.40.4.0: Nucleic acid-binding proteins	d2fxqa_	2fxq	0.73
b.40.4.0: Nucleic acid-binding proteins	d2vw9a_	2vw9	0.73
b.40.4.0: Nucleic acid-binding proteins	d4dama1	4dam	0.73
b.40.4.3: Nucleic acid-binding proteins	d5yuoa_	5yuo	0.73

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF04657	DMT_YdcZ	27.27
PF01183	Glyco_hydro_25	25.00
PF01521	Fe-S_biosyn	7.58
PF03061	4HBT	5.30
PF02417	Chromate_transp	3.03
PF08245	Mur_ligase_M	0.76
PF08447	PAS_3	0.76
PF01068	DNA_ligase_A_M	0.76
PF08734	GYD	0.76
PF07690	MFS_1	0.76
PF01988	VIT1	0.76
PF02643	DUF192	0.76
PF13622	4HBT_3	0.76
PF01872	RibD_C	0.76
PF06999	Suc_Fer-like	0.76
PF02452	PemK_toxin	0.76
PF03405	FA_desaturase_2	0.76
PF03992	ABM	0.76
PF08327	AHSA1	0.76
PF01494	FAD_binding_3	0.76
PF12680	SnoaL_2	0.76
PF00581	Rhodanese	0.76
PF13561	adh_short_C2	0.76
PF00201	UDPGT	0.76

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG3238	Uncharacterized membrane protein YdcZ, DUF606 family	Function unknown [S]	27.27
COG3757	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	Cell wall/membrane/envelope biogenesis [M]	25.00
COG0316	Fe-S cluster assembly iron-binding protein IscA	Posttranslational modification, protein turnover, chaperones [O]	7.58
COG4841	Uncharacterized conserved protein YneR, related to HesB/YadR/YfhF family	Function unknown [S]	7.58
COG2059	Chromate transport protein ChrA	Inorganic ion transport and metabolism [P]	3.03
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.52
COG1819	UDP:flavonoid glycosyltransferase YjiC, YdhE family	Carbohydrate transport and metabolism [G]	1.52
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.76
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.76
COG1430	Uncharacterized conserved membrane protein, UPF0127 family	Function unknown [S]	0.76
COG1633	Rubrerythrin, includes spore coat protein YhjR	Inorganic ion transport and metabolism [P]	0.76
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.76
COG1814	Predicted Fe2+/Mn2+ transporter, VIT1/CCC1 family	Inorganic ion transport and metabolism [P]	0.76
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.76
COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	Defense mechanisms [V]	0.76
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.76
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.76
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.76
COG4759	Uncharacterized conserved protein, contains thioredoxin-like domain	General function prediction only [R]	0.76
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	86.36 %
Unclassified	root	N/A	13.64 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	86.36 %
Unclassified	root	N/A	13.64 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	86.36 %
Unclassified	root	N/A	13.64 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	62.12 %
Unclassified	root	N/A	13.64 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.03 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	56.82 %
Unclassified	root	N/A	13.64 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3.03 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.52 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	40.15 %
Unclassified	root	N/A	13.64 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	3.03 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.52 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	37.88 %
Unclassified	root	N/A	13.64 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3.03 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.52 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.76 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.76 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	37.88 %
Unclassified	root	N/A	13.64 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3.03 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.52 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.76 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2067725001\|GPWNP_F5MPXY301BX3JK	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	544	Open in IMG/M
2067725003\|GPWSG_F5G3JLY01DQ98A	Not Available	536	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c2371033	All Organisms → cellular organisms → Bacteria	1316	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_14488280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1072	Open in IMG/M
3300000891\|JGI10214J12806_11131268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	850	Open in IMG/M
3300004081\|Ga0063454_101323900	Not Available	605	Open in IMG/M
3300004114\|Ga0062593_100690965	All Organisms → cellular organisms → Bacteria	993	Open in IMG/M
3300004114\|Ga0062593_101867990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	662	Open in IMG/M
3300004153\|Ga0063455_100730960	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300004156\|Ga0062589_100429156	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1086	Open in IMG/M
3300004156\|Ga0062589_101310125	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	700	Open in IMG/M
3300004156\|Ga0062589_101823599	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300004643\|Ga0062591_101594403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	657	Open in IMG/M
3300005045\|Ga0071328_126450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	5585	Open in IMG/M
3300005093\|Ga0062594_100506257	Not Available	1023	Open in IMG/M
3300005179\|Ga0066684_10615820	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	729	Open in IMG/M
3300005345\|Ga0070692_10356906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	910	Open in IMG/M
3300005438\|Ga0070701_10496992	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300005440\|Ga0070705_101710149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	532	Open in IMG/M
3300005454\|Ga0066687_10623252	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300005454\|Ga0066687_10842101	Not Available	546	Open in IMG/M
3300005518\|Ga0070699_100235832	All Organisms → cellular organisms → Bacteria	1632	Open in IMG/M
3300005536\|Ga0070697_100133534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2083	Open in IMG/M
3300005536\|Ga0070697_100135108	All Organisms → cellular organisms → Bacteria → Proteobacteria	2071	Open in IMG/M
3300005719\|Ga0068861_100743858	Not Available	915	Open in IMG/M
3300006049\|Ga0075417_10444324	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300006049\|Ga0075417_10562731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	577	Open in IMG/M
3300006196\|Ga0075422_10022893	All Organisms → cellular organisms → Bacteria	2135	Open in IMG/M
3300006844\|Ga0075428_100617056	All Organisms → cellular organisms → Bacteria	1158	Open in IMG/M
3300006845\|Ga0075421_101013256	All Organisms → cellular organisms → Bacteria	939	Open in IMG/M
3300006846\|Ga0075430_100466415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1042	Open in IMG/M
3300006853\|Ga0075420_101250408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	638	Open in IMG/M
3300006876\|Ga0079217_10127163	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1194	Open in IMG/M
3300006894\|Ga0079215_10155034	All Organisms → cellular organisms → Bacteria	1100	Open in IMG/M
3300006894\|Ga0079215_11239146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	571	Open in IMG/M
3300006969\|Ga0075419_11484660	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	508	Open in IMG/M
3300007004\|Ga0079218_10345099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1236	Open in IMG/M
3300007004\|Ga0079218_11992763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	663	Open in IMG/M
3300007076\|Ga0075435_101311660	Not Available	634	Open in IMG/M
3300009147\|Ga0114129_10175498	All Organisms → cellular organisms → Bacteria	2919	Open in IMG/M
3300009795\|Ga0105059_1008366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	964	Open in IMG/M
3300009808\|Ga0105071_1008994	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1294	Open in IMG/M
3300009813\|Ga0105057_1018836	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	997	Open in IMG/M
3300009814\|Ga0105082_1101639	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	543	Open in IMG/M
3300009815\|Ga0105070_1042473	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	831	Open in IMG/M
3300009817\|Ga0105062_1083424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	618	Open in IMG/M
3300009818\|Ga0105072_1118574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	541	Open in IMG/M
3300009840\|Ga0126313_11552040	Not Available	551	Open in IMG/M
3300010039\|Ga0126309_10470893	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	767	Open in IMG/M
3300010166\|Ga0126306_10788731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	766	Open in IMG/M
3300011003\|Ga0138514_100048033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	856	Open in IMG/M
3300012201\|Ga0137365_10551882	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	846	Open in IMG/M
3300012211\|Ga0137377_11166048	Not Available	700	Open in IMG/M
3300012681\|Ga0136613_10580886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	603	Open in IMG/M
3300012684\|Ga0136614_10055562	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2992	Open in IMG/M
3300017965\|Ga0190266_10075426	All Organisms → cellular organisms → Bacteria	1298	Open in IMG/M
3300017974\|Ga0187777_11272756	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	540	Open in IMG/M
3300018000\|Ga0184604_10171578	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	728	Open in IMG/M
3300018027\|Ga0184605_10019691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2691	Open in IMG/M
3300018027\|Ga0184605_10153288	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1038	Open in IMG/M
3300018052\|Ga0184638_1106793	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1026	Open in IMG/M
3300018056\|Ga0184623_10007286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4719	Open in IMG/M
3300018056\|Ga0184623_10133780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1147	Open in IMG/M
3300018056\|Ga0184623_10147545	Not Available	1087	Open in IMG/M
3300018061\|Ga0184619_10337141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	689	Open in IMG/M
3300018074\|Ga0184640_10168281	Not Available	983	Open in IMG/M
3300018422\|Ga0190265_10086233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2892	Open in IMG/M
3300018422\|Ga0190265_11282370	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	850	Open in IMG/M
3300018422\|Ga0190265_12037536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	679	Open in IMG/M
3300018422\|Ga0190265_12627453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	601	Open in IMG/M
3300018429\|Ga0190272_11336534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	716	Open in IMG/M
3300018432\|Ga0190275_10253781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1698	Open in IMG/M
3300018466\|Ga0190268_10661303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	757	Open in IMG/M
3300018469\|Ga0190270_10033558	All Organisms → cellular organisms → Bacteria	3376	Open in IMG/M
3300018469\|Ga0190270_10317373	All Organisms → cellular organisms → Bacteria	1398	Open in IMG/M
3300018469\|Ga0190270_12144908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	618	Open in IMG/M
3300018469\|Ga0190270_12539037	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	575	Open in IMG/M
3300018481\|Ga0190271_13147837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	553	Open in IMG/M
3300019255\|Ga0184643_1181354	Not Available	897	Open in IMG/M
3300019279\|Ga0184642_1604752	Not Available	1098	Open in IMG/M
3300019377\|Ga0190264_10192477	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1113	Open in IMG/M
3300019377\|Ga0190264_10240911	All Organisms → cellular organisms → Bacteria	1039	Open in IMG/M
3300026312\|Ga0209153_1013324	All Organisms → cellular organisms → Bacteria	2622	Open in IMG/M
3300026535\|Ga0256867_10000029	All Organisms → cellular organisms → Bacteria	49828	Open in IMG/M
3300026535\|Ga0256867_10033039	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2159	Open in IMG/M
3300027273\|Ga0209886_1004875	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1856	Open in IMG/M
3300027379\|Ga0209842_1059076	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	685	Open in IMG/M
3300027384\|Ga0209854_1057780	Not Available	673	Open in IMG/M
3300027561\|Ga0209887_1055113	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	850	Open in IMG/M
3300027577\|Ga0209874_1034327	All Organisms → cellular organisms → Bacteria	1375	Open in IMG/M
3300027650\|Ga0256866_1005302	All Organisms → cellular organisms → Bacteria	3189	Open in IMG/M
3300027886\|Ga0209486_10396525	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	836	Open in IMG/M
3300027907\|Ga0207428_10492691	All Organisms → cellular organisms → Bacteria	891	Open in IMG/M
3300027961\|Ga0209853_1081205	Not Available	846	Open in IMG/M
3300028589\|Ga0247818_11100566	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	565	Open in IMG/M
3300028715\|Ga0307313_10018192	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1881	Open in IMG/M
3300028719\|Ga0307301_10038852	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1448	Open in IMG/M
3300028771\|Ga0307320_10003940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5283	Open in IMG/M
3300028771\|Ga0307320_10082387	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1211	Open in IMG/M
3300028771\|Ga0307320_10105834	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1071	Open in IMG/M
3300028771\|Ga0307320_10215164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	753	Open in IMG/M
3300028793\|Ga0307299_10249533	Not Available	667	Open in IMG/M
3300028796\|Ga0307287_10004658	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4462	Open in IMG/M
3300028796\|Ga0307287_10259335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	658	Open in IMG/M
3300028799\|Ga0307284_10320436	Not Available	625	Open in IMG/M
3300028814\|Ga0307302_10419096	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	662	Open in IMG/M
3300028819\|Ga0307296_10547189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	633	Open in IMG/M
3300028824\|Ga0307310_10217628	Not Available	907	Open in IMG/M
3300028878\|Ga0307278_10017579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3313	Open in IMG/M
3300028878\|Ga0307278_10091807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1366	Open in IMG/M
3300028878\|Ga0307278_10268860	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	756	Open in IMG/M
3300028880\|Ga0307300_10157312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	718	Open in IMG/M
3300030006\|Ga0299907_10029376	All Organisms → cellular organisms → Bacteria	4243	Open in IMG/M
3300030006\|Ga0299907_10057602	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3111	Open in IMG/M
3300030006\|Ga0299907_10071757	All Organisms → cellular organisms → Bacteria	2802	Open in IMG/M
3300030006\|Ga0299907_10128794	All Organisms → cellular organisms → Bacteria	2086	Open in IMG/M
3300030006\|Ga0299907_10189899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1697	Open in IMG/M
3300030006\|Ga0299907_10205943	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1622	Open in IMG/M
3300030006\|Ga0299907_10264839	All Organisms → cellular organisms → Bacteria	1409	Open in IMG/M
3300030006\|Ga0299907_10345128	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1206	Open in IMG/M
3300030006\|Ga0299907_10471191	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	997	Open in IMG/M
3300030006\|Ga0299907_10639764	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	822	Open in IMG/M
3300030006\|Ga0299907_10746962	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	743	Open in IMG/M
3300030006\|Ga0299907_10823959	All Organisms → cellular organisms → Bacteria → Proteobacteria	697	Open in IMG/M
3300030619\|Ga0268386_10008191	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	7961	Open in IMG/M
3300031232\|Ga0302323_103369958	All Organisms → cellular organisms → Bacteria → Terrabacteria group	509	Open in IMG/M
3300032122\|Ga0310895_10337393	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	723	Open in IMG/M
3300032126\|Ga0307415_101926148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	574	Open in IMG/M
3300033407\|Ga0214472_10041057	All Organisms → cellular organisms → Bacteria	4714	Open in IMG/M
3300033417\|Ga0214471_10053133	All Organisms → cellular organisms → Bacteria	3306	Open in IMG/M
3300033417\|Ga0214471_10940987	Not Available	667	Open in IMG/M
3300033417\|Ga0214471_11432305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	519	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.15%
Host-Associated	Host-Associated	9.85%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.30%
Aquatic	Environmental → Aquatic	9.85%
Plants	Host-Associated → Plants	9.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	78.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.09%
Sediment	Environmental → Aquatic → Sediment	6.82%
Freshwater	Environmental → Aquatic → Freshwater	3.03%
Peat	Environmental → Terrestrial → Peat	0.76%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.76%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.12%
Sand	Environmental → Terrestrial → Soil → Sand	9.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.09%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.82%
Loam	Environmental → Terrestrial → Soil → Loam	6.06%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.52%
Ice	Environmental → Aquatic → Freshwater → Ice	1.52%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.76%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.76%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.76%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	40.15%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	9.85%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	9.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.09%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.82%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.55%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	3.03%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.52%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	1.52%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.52%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.52%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.76%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.76%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.76%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	36.36%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	9.85%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.33%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	6.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.30%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.55%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	3.03%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.27%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.52%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	1.52%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.52%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.52%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.76%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.76%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.76%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2067725001	Soil microbial communities from Great Prairies - Wisconsin Native Prairie soil	Environmental	Open in IMG/M
2067725003	Soil microbial communities from Great Prairies - Wisconsin, Switchgrass soil	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005045	Permafrost microbial communities from Fox Tunnel, Fairbanks, Alaska, USA	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009795	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_40_50	Environmental	Open in IMG/M
3300009808	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_40_50	Environmental	Open in IMG/M
3300009813	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_10_20	Environmental	Open in IMG/M
3300009814	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60	Environmental	Open in IMG/M
3300009815	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10	Environmental	Open in IMG/M
3300009817	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20	Environmental	Open in IMG/M
3300009818	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012681	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ272 (21.06)	Environmental	Open in IMG/M
3300012684	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ279 (21.06)	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019255	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026535	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (HiSeq)	Environmental	Open in IMG/M
3300027273	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_40_50 (SPAdes)	Environmental	Open in IMG/M
3300027379	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20 (SPAdes)	Environmental	Open in IMG/M
3300027384	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027561	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027577	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027650	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67 HiSeq	Environmental	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027961	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030619	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M
3300033417	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPWNP_02599740	2067725001	Soil	MLGEEEAIVLEVAPFDLHGVTYYDLAVGFRDRSVQQARLGGESVPDGLQAGDRVLA
GPWSG_02757870	2067725003	Soil	GEEEAVVLEVKAFDLHGVTYYDLARWGSPDRSVQEARLGAESVPDDLRKGERILATRVANMVISIRRP
ICChiseqgaiiDRAFT_23710332	3300000033	Soil	MLGEEEAVVLEVAPFDLHGVRYYDLAVGFRDRSVTQARLGAESVPDGLQKGDRILATRVANMVVSVRRP*
ICChiseqgaiiFebDRAFT_144882802	3300000363	Soil	MLAEEEAIVLEVAPFXLHGVTLYDLAVGFXXRSXQQARLGAESVPDGLRSGDHVLATRVANMVVSIRRP*
JGI10214J12806_111312681	3300000891	Soil	MLAEEEAIVLEVAPFDLHGVRYYDLAVGFPDRSVQQARLGAESVPDDLQKGDRIFATRVANMVV
Ga0063454_1013239002	3300004081	Soil	VLEVKPFDLHGVRYSDLTLTFPDRSVLAARLGPESVPQGLAAGDRVLATMAANMVVAVRRAQTDD*
Ga0062593_1006909652	3300004114	Soil	VLEVKPFDLHGVRYADLTLTFQDRSVLTARLGPESVPDELSAGDRVLATVAANMVVSVRRAEAKD*
Ga0062593_1018679901	3300004114	Soil	MLAEEEAIVLEVAPFDLHGVRYYDLAVGFPDRSVQQARLGAESVPDDLQKGDRIFATRVANMVVSVRRP*
Ga0063455_1007309602	3300004153	Soil	VLEVKPFDLHGVRYSDLTLTFPDRSVLAARLGPESVPQGLAAGDRVLATMAANMVVAV
Ga0062589_1004291563	3300004156	Soil	MLGEEEAVVLEVNAFDLHGVTYYDLAVGFPDRSVQEARLGAESVPADLRKGERILATRVANMVISIRRP*
Ga0062589_1013101252	3300004156	Soil	MLAEEEAIVLEVAPFDLHGVRYYDLAVGFPDRSVQQARLGAESVPDDLQKGDRIFATRVA
Ga0062589_1018235992	3300004156	Soil	MLGEEEAVVLEVKAFDLHGVTYYDLAVGFPDRSVQEARLGAESVPDDLRKGERILATRVANMVISIRRP*
Ga0062591_1015944031	3300004643	Soil	MLGEEEAVVLEVKALDIHGVAYFDLAVGFPDRSVQQARLGAESVPGDLEKGERILATRVANMVISVRRP*
Ga0071328_1264502	3300005045	Permafrost	MLSEEEALVLEVAPFDLHGVRYYDLSVGFPDRSVQQARLGAESVPDGLQKGDRVLATRVANMVISVRKP*
Ga0062594_1005062572	3300005093	Soil	MLGEEEAVVLEVTALDIHGVAYFDLAVGFPDRSVQQARLGAESVPDDLEKGERILATRVANMVISVRRP*
Ga0066684_106158201	3300005179	Soil	KPFDLHGITYYDLALIFSDGSTQSARLGPEGVPDGLKVEDRVLVTMAANMVVSLRRP*
Ga0070692_103569062	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MLGEEEAVVLEVSPFDLHGVTYYDLAVGFRDRSVQEARLGAESVPDGLQAGDRVLATRVANMVVSVRRP*
Ga0070701_104969922	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	VLEVKPFDLHGVRYADLTLTLPDRSVVAARLGPESVPEGLAAGDRVLATMAANMVVAVRRSETDD*
Ga0070705_1017101491	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	VLEVKPFDLHGVRYADLTLTLPDRSVVAARLGPDSVPEGLAAGDRVLATMAANMVVAVRRSETDD*
Ga0066687_106232522	3300005454	Soil	VLEITPFDLHGVRYSDLTLTFPDRSVLTARLGPESVPQGLAAGDRVLATMAANMVVAVRRSGTDEPGTDEPRTDD*
Ga0066687_108421011	3300005454	Soil	LEITPFDIHGVRYADLTLTFPDRSVLSARLGPEAVPDELEAGERVLATVAANMVVSVRRADTP*
Ga0070699_1002358322	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MLVEEEAVVLEVTALDIHGVAYFDLAVGFPDRSVQQARLGAESVPDDLEKGERILATRVANMVISVRRP*
Ga0070697_1001335341	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MLGEEEAVVLEVTALDIHGVAYFDLAVGFPDRSVQPARLGAESVPDDLEKGERILAT
Ga0070697_1001351081	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	ALDIHGVAYFDLAVGFPDRSVQQARLGAESVPDDLEKGERILATRVANMVISVRRP*
Ga0068861_1007438581	3300005719	Switchgrass Rhizosphere	VLEVKPFDLHGVRYADLTLTFPDRSVVAARLGPESVPEGLAAGDRVLATMAANMVVAVRRSETDD*
Ga0075417_104443242	3300006049	Populus Rhizosphere	MLGEEEAIVLQTRSFDLHGVTYHDVAVGLRDRSVQEARLGPESVPEDLREGDRILVTRVANIVVSIRRPDDGDRR*
Ga0075417_105627312	3300006049	Populus Rhizosphere	MLGEEEAVVLEVKAFDLHGVTYYDLAVGFPDRSVQEARLGAESVPDDLRKGERILATRVANMVISI
Ga0075422_100228932	3300006196	Populus Rhizosphere	MLGEEEAIVLQTRSFDLHGVTYHDVAVGLRDRSVQEARLGPESVPEDLREGDRILVTRVANIVVSIRRPDDGHRR*
Ga0075428_1006170562	3300006844	Populus Rhizosphere	MLGEEDAVVLEVAPFDLHGVRYYDLAVGFPDRSVTQARLGAESVPEGLQKGDRILATRVANMVVSVRRP*
Ga0075421_1010132562	3300006845	Populus Rhizosphere	MLGEEEAVVLEVAPFDLHGVRYYDLAVGFPDRSVTQARLGAESVPEGLQKGDRILATRVANMVVSVRRP*
Ga0075430_1004664151	3300006846	Populus Rhizosphere	MLGEEEAIVLQTRSFDLHGVTYHDVAVGLRDRSVQEARLGPESVPEDLREGDRILVTRVANIVVSI
Ga0075420_1012504082	3300006853	Populus Rhizosphere	AIVLQTRSFDLHGVTYHDVAVGLRDRSVQEARLGPESVPEDLREGDRILVTRVANIVVSIRRPDDGDRR*
Ga0079217_101271632	3300006876	Agricultural Soil	MFGDQEATVTAVKPFDLHGVTYYDVALIFSDGSTQSARLGPEGVPDGVKAGDRVLVTMVANMVVSLRRP*
Ga0079215_101550342	3300006894	Agricultural Soil	MLGEVEAIVLEVKPFDLHGVRYYDLAVGFPDRSVQQARLGAESVPDHLEKGDRVLATRVANMVISVRRP*
Ga0079215_112391462	3300006894	Agricultural Soil	DDVLATCWGTPEAVVTEVKSFDFHGVTYYDLALIFSDGSTQSARLGPEGVPNGLKAGEGVLVTMAANMVVSLRRP*
Ga0075419_114846602	3300006969	Populus Rhizosphere	DAVVLEVAPFDLHGVRYYDLAVGFPDRSVTQARLGAESVPEGLQKGDRILATRVANMVVSVRRP*
Ga0079218_103450993	3300007004	Agricultural Soil	MVTEVKPFDLHGVTYYGLALIFSDGSTQSARLGPEGVPDGLRAGDGVLVTMAANMVVSLRRP*
Ga0079218_119927632	3300007004	Agricultural Soil	MLGEEEAIVLEVKPFDLHGVRYYDIAVGFPDRSVQQARLGAESLPDDLEKGDGVLATRVANMVISVRRP*
Ga0075435_1013116602	3300007076	Populus Rhizosphere	GEREAVVLEVKPFDLHGVRYADLTLTFQDRSVLTARLGPESVPDELSAGDRVLATVAANMVVSVRRAEPKD*
Ga0114129_101754982	3300009147	Populus Rhizosphere	MLGEEEAIVLQTRSFDLHGVTYHDVAVGLRDRSVQEARLGPESVPEDLREGDRILVTRVANLVVSIRRPDDGDRR*
Ga0105059_10083662	3300009795	Groundwater Sand	MLGDREAVVREVKPFDLHGVTYYDLALIFSDGSMQSARLGPEGVPDGLKAGDRVLVTMAANMVVSLRRP*
Ga0105071_10089943	3300009808	Groundwater Sand	MLGDREAVVTEVKPFDLHGVTYDLALIFSDGSMQSARLGPEGVPDGLKAGDRVLVTMAANMVVSLRRP*
Ga0105057_10188362	3300009813	Groundwater Sand	MLGDREAVVREVKPFDLHGVTYYDLALIFSDGSTQSARLGPEGVPDGLKAGDRVLVTMAANMVVSLRRP*
Ga0105082_11016391	3300009814	Groundwater Sand	AVVTEVKPFDLHGVTYYDLALIFSDGNTQSARLGPEGVPDGLKAGDRVLVTMAANMVVSLRRP*
Ga0105070_10424732	3300009815	Groundwater Sand	LGDREAVVTEVKPFDLHGVTYDLALIFSDGSMQSARLGPEGVPDGLKAGDRVLVTMAANMVVSLRRP*
Ga0105062_10834242	3300009817	Groundwater Sand	MLGEEEAVILEVKALDIHGVRYFDLAVGFPDRSVQQTRLGAESVPEDLEKGDRILATRVANMVLSIRRP*
Ga0105072_11185742	3300009818	Groundwater Sand	MLGEDEAVILEVKAFDLHGVTYYDLAVGFPDRSVQQARLGSESVPDGLQKGDRVLATRVANMVISVRRP*
Ga0126313_115520401	3300009840	Serpentine Soil	MLGDREAVVTGVKPFDLHGVTYYDLALIFSDGSTQSARLGPEGVPDGLKAEDRVLVTMAANMVVSLRRP*
Ga0126309_104708932	3300010039	Serpentine Soil	MLGEEEAVILEVKALDIHGVRYFDLAVGFPDRSVQQTRLGAESVPGDLEKGDRVLATRVANMVISIRRP*
Ga0126306_107887312	3300010166	Serpentine Soil	MLGDREAVVTGVKPFDLHGVTYYDLALIFSDGSTQSARLGPEGVPDGLKAGDRVLLTMAANMVVSLRRP*
Ga0138514_1000480332	3300011003	Soil	MLGEEEAVILEVKGLDIHGVRYFDLAVGFPDRSVQQTRLGAESVPGDLEKGDRVLATRVA
Ga0137365_105518822	3300012201	Vadose Zone Soil	TGVKPFDLHGVTYYDLALIFSDGSTQSTRLGPEGVPDGLKAEDRVLVTMAANMVVSLRRP
Ga0137377_111660481	3300012211	Vadose Zone Soil	MLGDREALVTGVKPFDLHGVTYYDLALIFSDGSTQSARLGPEGVPDGLKAEDRVLVTMAANMVVSLRRP*
Ga0136613_105808861	3300012681	Polar Desert Sand	EVKPFDLHGVRYYDLAVGFPDRSVQQARLGAESVPDDLEKGDRVLATRVANMVISVRRP*
Ga0136614_100555623	3300012684	Polar Desert Sand	VLGEEEAVVLEVKPFDLHGVRYYDLAVGFPDRSVQQARLGAESVPDDLEKGDRVLATRVANMVISVRRP*
Ga0190266_100754261	3300017965	Soil	EEAVVLEVSPFDLHGVTYYDLAVGFRDRSVQQARLGAESVPDGLQAGDRVLATRVANMVVSVRRP
Ga0187777_112727562	3300017974	Tropical Peatland	MMGEQEATVVAIKPFDLHGTKYYDLAVRFADGSNEQARLGAESVPDGIEPGDAVMATRVANMVISLRRP
Ga0184604_101715782	3300018000	Groundwater Sediment	MLGEEEAVILEVKALDIHGVRYFDLAVGFPDRSVQQTRLGAESVPGDLEKGDRILATRVANMVISIRRP
Ga0184605_100196913	3300018027	Groundwater Sediment	MLGEEEAVVLEVKSLDIHGVTYHDLTVGFPDRSVQQARLGAESVPDDLQKGERILATRVANMVISVRRP
Ga0184605_101532882	3300018027	Groundwater Sediment	MLGEEEAVVLEVKSLDVHGVMYHDLAVGFPDRSVQHARLGAESVPHDLQKGERILATRVANMVISVRRP
Ga0184638_11067932	3300018052	Groundwater Sediment	MLGEEEAVVLEVKSLDIHGVMYFDLAVGFPDRSVQHARLGAESVPDDLQKGERILATRVANMVISIRRP
Ga0184623_100072863	3300018056	Groundwater Sediment	MLGEEEAVILEVKPLDIHGVTYFDLAVGFPDRSVQQARLGAESVPEDLQKGDRVLATRVANMVISIRRP
Ga0184623_101337802	3300018056	Groundwater Sediment	MLGEDEVVILEIEPFDLHGVRYYDLAVGFPDRSVQQARLGSESVPEGLQKGDRVLATRVANMVVSVRRP
Ga0184623_101475452	3300018056	Groundwater Sediment	MFGDQEATVTAVKPFDLHGVNYYDVALVFSDGSTQSARLGPEGVPDGVKAGDRVLVTMVANMVVSLRRP
Ga0184619_103371411	3300018061	Groundwater Sediment	MLGEEEAVVLEVKSLDIHGVTYHDLTVGFPDRSVQQARLGAESVPDDLQKGERILATRVANMVISVRPP
Ga0184640_101682811	3300018074	Groundwater Sediment	MLGDREAVVTEVKPFDLHGVTYYDLALIFSDGSAQSARLGPEGVPDGLKAGDRVLVTMAA
Ga0190265_100862333	3300018422	Soil	MLGEEEAVVLEVKPFDLHGVRYYDLAVGFPDRSVQQARLGAESVPDELQKGERILATRVANMVISVRRP
Ga0190265_112823702	3300018422	Soil	MLAEEEAIVLEVAPFELHGVRYYDLAVGFPDRSVQQARLGAESVPDDLQNGDRILATRVANMVVSVRRP
Ga0190265_120375362	3300018422	Soil	MRSEEEAIVLEVKPFDLHGVRYYDLAVGFSDRSVQQARLGAESVPDRLEKGDRVLATRVANMVISVRRP
Ga0190265_126274532	3300018422	Soil	MLGEEEAVVLEVEPFDLHGVRYYDLAVGFPDRSVQQARLGAESVPDALQKGERVLATRVANMVISVRRP
Ga0190272_113365342	3300018429	Soil	MLAEEEAIVLEVAPFELHGVRYYDLAVGFPDRSVQQARLGAESVPEDLQKGDRILATRVANMVVSVRRP
Ga0190275_102537813	3300018432	Soil	MLGDREAVVTGVKPFDLHGVTYYDLALIFSDGSTQSARLGPEGVPDGLKAGDRVLITMAANMVVSLRRP
Ga0190268_106613031	3300018466	Soil	MLGEEEGVILEVTPFDLHGVRYYDLAVGFPDRSVTQARLGAESVPEGLEKGDRILATRVANMVVSVRRP
Ga0190270_100335582	3300018469	Soil	MLGEEEAIVLEVAPFDLHGVTYYDLAVGFRDRSVQQARLGAESVPDGLQAGDRVLATRVANMVVSLRLP
Ga0190270_103173732	3300018469	Soil	MLGEEEAIVLEVAPFDLHGVKYYDLAVGFRDRSVQQARLGAESVPDDLQAGDRVLATRVANMVVSLRRP
Ga0190270_121449082	3300018469	Soil	MMGEEEGIVLEVAPFDLHGVTYYDLAVGFPDRSVQQARLGAESVPDDLQKGDRVLATRVANMVVSLRRP
Ga0190270_125390371	3300018469	Soil	EVKPFDLHGVGYYDLAVVFPDRSVQQARLGAESVPDDLAKGDRVLATRVANMVISVRRP
Ga0190271_131478371	3300018481	Soil	MLGEEEGIVLEVAPFDLHGVTYYDLAVGFPDRSVQQARLGAESVPDGLQKGDRVLATRVANMVVSVRRP
Ga0184643_11813542	3300019255	Groundwater Sediment	MLGEEEAVVLEVKALDIHGVAYFDLAVAFPDRSVQQARLGAESVPDDLQKGERILATRVANMVISVRRP
Ga0184642_16047521	3300019279	Groundwater Sediment	SMLGEEEAVVLEVKSLDVHGVMYHDLAVGFPDRSVQHARLGAESVPHDLQKGERILATRVANMVISVRRP
Ga0190264_101924772	3300019377	Soil	MLGEEEAVVLEVAPFDLHGVRYYDLAVGFPDRSVTQARLGAESVPEGLQKGDRILATRVANMVVSVRRP
Ga0190264_102409112	3300019377	Soil	MLGEEEAVILEVTPLDLHGVTYYDLAVGFRDRSVQQARLGAESVPDGLRSGEQVLATRVANMVVSIRRP
Ga0209153_10133242	3300026312	Soil	VLEITPFDLHGVRYSDLTLTFPDRSVLTARLGPESVPQGLAAGDRVLATMAANMVVAVRRSGTDEPGTDEPRTDD
Ga0256867_1000002916	3300026535	Soil	MLGDREAVVTEVKPFDLHGVTYYDLALILSDGSTQSARLGPESVPDGLKAGDRVLVTMAANMVVSLRQP
Ga0256867_100330392	3300026535	Soil	VVTEVKPFDLHGVTYCDLAVTFSDGSTQSARLGPESVPHGLKTGDRVLVTMAANMVVSLRRP
Ga0209886_10048752	3300027273	Groundwater Sand	MLGDREAVVTEVKPFDLHGVTYDLALIFSDGSMQSARLGPEGVPDGLKAGDRVLVTMAANMVVSLRRP
Ga0209842_10590762	3300027379	Groundwater Sand	MLGEEEAVILEVKALDIHGVRYFDLAVGFPDRSVQQTRLGAESVPEDLEKGDRILATRVANMVISIRRP
Ga0209854_10577802	3300027384	Groundwater Sand	MLGDREAVVTEVKPFDLHGVTYDLALIFSDGSTQSARLGPEGVPDGLKAGDRVLVTMAANMV
Ga0209887_10551132	3300027561	Groundwater Sand	MLGEDEAVILEVKAFDLHGVTYYDLAVGFPDRSVQQARLGSESVPDGLQKGDRVLATRVANMVISVRRP
Ga0209874_10343272	3300027577	Groundwater Sand	MLGEDEGVILEVKAFDLHGVTYYDLAVGFPDRSVQQARLGSESVPDGLQKGDRVLATRVANMVISVRRP
Ga0256866_10053026	3300027650	Soil	MLGDRDAVVTEVKPFDLHGVTYCDLAVTFSDGSTQSARLGPESVPHGLKTGDRVLVTMAANMVVSLRRP
Ga0209486_103965252	3300027886	Agricultural Soil	MLGEEEAIVLEVKPFDLHGVRYYDLAVGFPDRSVQQARLGAESVPDHLEKGDRVLATRVANIVISVRRP
Ga0207428_104926912	3300027907	Populus Rhizosphere	MLGEEEAIVLQTRSFDLHGVTYHDVAVGLRDRSVQEARLGPESVPEDLREGDRILVTRVANIVVSIRRPDDGDRR
Ga0209853_10812052	3300027961	Groundwater Sand	MLGDREAVVTEVKPFDLHGVTYYDLALIFSDGSMQSARLGPEGVPDGLKAGDRVLVTMAANMVVSLRRP
Ga0247818_111005662	3300028589	Soil	MLGEEEAVVLEVSPFDLHGVTYYDLAVGFRDRSVQQARLGAESVPDGLQAGDRVLATRVANMVVSVRRP
Ga0307313_100181922	3300028715	Soil	MLGEEEAIVLEVRSLDIHGVTYYDLAVGFLDRSVQQARLGAESVPDDLEKGERILATRVANMVISVRRP
Ga0307301_100388521	3300028719	Soil	MLGQEEAIVLEVASLAIHGVTYFDLAFGFPDRSVQQARLGAESVPGDLKKGERILATRVANMVISVRRP
Ga0307320_100039402	3300028771	Soil	MLGEEEAIVLEVASLAIHGVTYFDLAFGFPDRSVQQARLGAESVPDDLKKGDRIMATRVANMVISVRRP
Ga0307320_100823872	3300028771	Soil	MLAEEEAIVLEVAPFDLHGVRYYDLAVGFPDRSVQQARLGAESVPDDLQKGDRILATRVANMVVSVRRP
Ga0307320_101058342	3300028771	Soil	MLGEEEAVILEVKALDIHGVRYFDLAVGFPDRSVQQTRLGAESVPGDLEKGDQVLATR
Ga0307320_102151642	3300028771	Soil	EEAVILEVKALDIHGVRYFDLAVGFPDRSVQQTRLGAESVPGDLEKGDQVLATRVANMVISIRRP
Ga0307299_102495332	3300028793	Soil	AGSMLGEEEAVVLEVTSLNIHGVTYFDLAVGFPDRSVQQARLGAESVPDNLQKGERILATRAANMVISVRRP
Ga0307287_100046583	3300028796	Soil	MLGQEEAIVLEVASLAIHGVTYYDLAVGFPDRSVQQARLGAESVPGDLKKGERILATRVANMVISVRRP
Ga0307287_102593352	3300028796	Soil	EAVILEVKALDIHGVRYFDLAVGFPDRSVQQTRLGAESVPGDLEKGDQVLATRVANMVISIRRP
Ga0307284_103204361	3300028799	Soil	DGTGIRLNPMLGEEEAIVLEVRSLDIHGVTYYDLAVGFLDRSVQQARLGAESVPDDLEKGERILATRVANMVISVRRP
Ga0307302_104190962	3300028814	Soil	MLGEEEAVVLEVKSLDVHGVTYVDLAVGFPDRSVQQARLGAESVPDDLQKGERIFATRVANMVISVRRP
Ga0307296_105471892	3300028819	Soil	MLGEEEAVVLEVKSLDIHGVTYHDLTVGFPDRSVQQARLGAESVPDDLQKGERILA
Ga0307310_102176282	3300028824	Soil	RYPHGTTLTAGSDGTGIRLNPMLGEEEAIVLEVRSLDIHGVTYYDLAVGFLDRSVQQARLGAESVPDDLAKGERILATRVANMVISVRRP
Ga0307278_100175794	3300028878	Soil	MLGEEEAVVLEVTSLDIHGVRYFDLAVGFPDRSVQQARLGAESVPDDLQKGERILATRVANMVISVRRP
Ga0307278_100918071	3300028878	Soil	MLGEEEAVVLEVKALDIHGVAYFDLAVGFPDRSVQQARLGAESIPDDLEKGERILATRVANLVISVRRP
Ga0307278_102688601	3300028878	Soil	MLGEEEAIVLEVASLAIHGVTYFDLAVGFPDRSVQQARLGAESVPDDLKKGDRIMATRVANMVISVRRP
Ga0307300_101573122	3300028880	Soil	MLGEEEAVVLEVKCVDVHGVMYHDLAVGFPDRSVQHARLGAESVPHDLQKGERILATRVANMVISVRRP
Ga0299907_100293763	3300030006	Soil	MMGEEGAIVLEVKPFDLHGVRYYDLAVVFPDRSIQQARLGAESVPGDLEKGDRVLATRVANMVISVRRP
Ga0299907_100576022	3300030006	Soil	MLAEEEAIVLKVAPFDLHGVRYYDLAVGFPDRSVQQARLGAESVPGDLQEGDRILATRVANMVISVRRR
Ga0299907_100717573	3300030006	Soil	MLAEEEALVLEVEPFDLHGVRYYDLSVGFPDRSVQQARLGAESVPDGLQKGDRVLATRVANMVISVRRP
Ga0299907_101287942	3300030006	Soil	MLGEEEAVILEVTPLDLHGVTYYDLAVGFRDRSVQQARLGAESVPGGLRSGEQVLATRVANMVVSIRRP
Ga0299907_101898993	3300030006	Soil	VVTEVRPFDLHGVTYYDLALAFPDGSTQSARLGPESVPEGLQAGDRVVATMAANMVVALRPAEEG
Ga0299907_102059433	3300030006	Soil	MVGDREAVVTEVKPFDLHGVTYYEALIFSDGSTQSARLGPEGVPDGLKAEDRVLVTMTAHMVVSLRRP
Ga0299907_102648392	3300030006	Soil	MLGEEEAVILEVTPFDLHGVTYYDLAVGFRDRSVQQARLGAESVPDGLRSGEQVLATRVANMVVSIRRP
Ga0299907_103451284	3300030006	Soil	MLGEEEAVILEVTSLDLHGVTYYDLEVGFRDRSVQQARLGAESVPDGLRSGEQVLATRVANMVVSIRRP
Ga0299907_104711912	3300030006	Soil	MLGEEDAIVLEVKPFDLHGVRYYDLAVGFPDRSVQQARLGAESVPDDLVKGERVLATRVANMVISVRRP
Ga0299907_106397641	3300030006	Soil	MLAEEEAIVLEVAPFDLHGVRYYDLAVGFSDRSVQQARLGAESVPDDLQKGDRILATRVANMVISVRRP
Ga0299907_107469622	3300030006	Soil	MLGDREAVVTEVKPFDLHGVTYYDLALIFSDGSTQSARLGPEGVPDGLKAGDRVLITMAANMVVSLRRP
Ga0299907_108239592	3300030006	Soil	MLGEEDAIVLEVKPFDLHGVRYYDLAVGFPDRSVQQARLGAESVPDDLAKGDRVLATRVANMVISVRRA
Ga0268386_100081912	3300030619	Soil	MLGEEDAIVLEVKPFDLHGVRYYDLAVGFPDRSVQQARLGAESVPDDLAKGDRVLATRVANMVISVRRP
Ga0302323_1033699582	3300031232	Fen	MMGEREATVEAVRPFELHGMTYIDLAVRFDDGSVERARLGAESVPDGLQPGDRVTATRVANMLISLRRP
Ga0310895_103373932	3300032122	Soil	QTRSFDLHGVTYHDVAVGLRDRSVQEARLGPESVPEDLREGDRILVTRVANIVVSIRRPDDGDRR
Ga0307415_1019261482	3300032126	Rhizosphere	MMGEEDAVVLTVKQFDLHGVRYYDLAVGFPDRSVQQARLGAESVPDDLKEGDRILATRVANMVISVRHP
Ga0214472_100410575	3300033407	Soil	MLGEEEAIVLEVVPFDLHGVTYFDLTVGFPDRSVQQARLGAESVPEDLREGDRVLATRVVNMVISVRRP
Ga0214471_100531332	3300033417	Soil	VLGDKEATVTQLRPFDLHGVTYYDVELTLSDGASRSARLGPEGVPPGLEVGDAVMATMAANMVVSLRRP
Ga0214471_109409872	3300033417	Soil	VLGDKQATVTQVRPFDLHGVTYYDVELTLSDGTTRSARLGPEGVPPGLEVGDAVVATMAANMVVSLRRP
Ga0214471_114323052	3300033417	Soil	RVVLGEQEAVVTAVRPFDLHGVTYYDLALTFDDQSTQTARLGPEAVPEGLKAGDRVLVTMAANMAVSVRRP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F061032

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences