Metagenome Family F060991

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F060991
Family Type	Metagenome
Number of Sequences	132
Average Sequence Length	51 residues
Representative Sequence	MSDDVPTSDKARVRRQPPVPVTLAVFLASVVGFMLVVTGLFALLRYLGGWR
Number of Associated Samples	106
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	28.24 %
% of genes near scaffold ends (potentially truncated)	38.64 %
% of genes from short scaffolds (< 2000 bps)	78.79 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (84.091 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (12.121 % of family members)
Environment Ontology (ENVO)	Unclassified (50.758 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (61.364 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.84% β-sheet: 0.00% Coil/Unstructured: 53.16%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF11026	DUF2721	15.91
PF00149	Metallophos	15.15
PF03364	Polyketide_cyc	11.36
PF08281	Sigma70_r4_2	6.82
PF10604	Polyketide_cyc2	3.79
PF07992	Pyr_redox_2	1.52
PF08240	ADH_N	0.76
PF02852	Pyr_redox_dim	0.76
PF02515	CoA_transf_3	0.76
PF01546	Peptidase_M20	0.76

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	84.09 %
Unclassified	root	N/A	15.91 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	84.09 %
Unclassified	root	N/A	15.91 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	84.09 %
Unclassified	root	N/A	15.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.91 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	12.12 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.76 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.91 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	12.12 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.76 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.91 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	6.82 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	2.27 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.76 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.91 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	6.82 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2.27 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.76 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.91 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	6.82 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2.27 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.76 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.91 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	6.06 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2.27 %
unclassified Desulfobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae	0.76 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.91 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	6.06 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2.27 %
Desulfobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	0.76 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664022\|INPgaii200_c0643478	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101466840	Not Available	874	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101468051	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300000789\|JGI1027J11758_12399338	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300000955\|JGI1027J12803_105271075	Not Available	741	Open in IMG/M
3300002075\|JGI24738J21930_10162279	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300004114\|Ga0062593_100005125	All Organisms → cellular organisms → Bacteria	5385	Open in IMG/M
3300004157\|Ga0062590_102047796	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300004463\|Ga0063356_100562427	All Organisms → cellular organisms → Bacteria	1529	Open in IMG/M
3300004463\|Ga0063356_101761914	Not Available	929	Open in IMG/M
3300004463\|Ga0063356_102046996	Not Available	867	Open in IMG/M
3300004480\|Ga0062592_101287867	Not Available	689	Open in IMG/M
3300004643\|Ga0062591_101780272	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300005093\|Ga0062594_100529974	All Organisms → cellular organisms → Bacteria	1007	Open in IMG/M
3300005093\|Ga0062594_100962253	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300005327\|Ga0070658_10498202	All Organisms → cellular organisms → Bacteria	1052	Open in IMG/M
3300005328\|Ga0070676_10423105	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	931	Open in IMG/M
3300005328\|Ga0070676_10438661	Not Available	916	Open in IMG/M
3300005329\|Ga0070683_100573620	All Organisms → cellular organisms → Bacteria	1079	Open in IMG/M
3300005331\|Ga0070670_101065861	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300005337\|Ga0070682_101065604	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300005337\|Ga0070682_101898148	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300005338\|Ga0068868_100163436	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1840	Open in IMG/M
3300005339\|Ga0070660_100118167	All Organisms → cellular organisms → Bacteria	2114	Open in IMG/M
3300005339\|Ga0070660_101862952	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300005345\|Ga0070692_11377664	Not Available	508	Open in IMG/M
3300005347\|Ga0070668_100004546	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	10286	Open in IMG/M
3300005355\|Ga0070671_100209882	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1652	Open in IMG/M
3300005356\|Ga0070674_100267725	All Organisms → cellular organisms → Bacteria	1349	Open in IMG/M
3300005356\|Ga0070674_101843448	Not Available	549	Open in IMG/M
3300005364\|Ga0070673_100442023	All Organisms → cellular organisms → Bacteria	1169	Open in IMG/M
3300005366\|Ga0070659_101752844	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300005459\|Ga0068867_100912516	Not Available	791	Open in IMG/M
3300005518\|Ga0070699_100136382	All Organisms → cellular organisms → Bacteria	2165	Open in IMG/M
3300005530\|Ga0070679_101690175	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300005535\|Ga0070684_100030065	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	4612	Open in IMG/M
3300005543\|Ga0070672_100950286	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	760	Open in IMG/M
3300005543\|Ga0070672_101651268	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300005564\|Ga0070664_100664234	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300005564\|Ga0070664_102110099	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300005566\|Ga0066693_10293032	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300005578\|Ga0068854_101712512	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300005614\|Ga0068856_100437668	All Organisms → cellular organisms → Bacteria	1328	Open in IMG/M
3300005615\|Ga0070702_101537815	Not Available	548	Open in IMG/M
3300005616\|Ga0068852_100408229	All Organisms → cellular organisms → Bacteria	1337	Open in IMG/M
3300005840\|Ga0068870_10708368	Not Available	695	Open in IMG/M
3300005840\|Ga0068870_11115537	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300005842\|Ga0068858_100100223	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2701	Open in IMG/M
3300006237\|Ga0097621_100955292	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300006755\|Ga0079222_10346799	Not Available	1000	Open in IMG/M
3300009156\|Ga0111538_10030083	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	7047	Open in IMG/M
3300009177\|Ga0105248_10578323	All Organisms → cellular organisms → Bacteria	1267	Open in IMG/M
3300009789\|Ga0126307_10101507	All Organisms → cellular organisms → Bacteria	2280	Open in IMG/M
3300009789\|Ga0126307_10174931	All Organisms → cellular organisms → Bacteria	1721	Open in IMG/M
3300009789\|Ga0126307_10249672	All Organisms → cellular organisms → Bacteria	1426	Open in IMG/M
3300009840\|Ga0126313_10025754	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	3977	Open in IMG/M
3300010039\|Ga0126309_10881523	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300010045\|Ga0126311_10083073	All Organisms → cellular organisms → Bacteria	2157	Open in IMG/M
3300010166\|Ga0126306_10022426	All Organisms → cellular organisms → Bacteria	4184	Open in IMG/M
3300010399\|Ga0134127_12295557	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300012212\|Ga0150985_111487883	All Organisms → cellular organisms → Bacteria	2167	Open in IMG/M
3300012469\|Ga0150984_108015134	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300012898\|Ga0157293_10112475	Not Available	719	Open in IMG/M
3300012911\|Ga0157301_10463550	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300012955\|Ga0164298_10040205	All Organisms → cellular organisms → Bacteria	2176	Open in IMG/M
3300012955\|Ga0164298_11194057	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300012957\|Ga0164303_10270640	All Organisms → cellular organisms → Bacteria	985	Open in IMG/M
3300012958\|Ga0164299_11504791	Not Available	525	Open in IMG/M
3300012960\|Ga0164301_10196948	All Organisms → cellular organisms → Bacteria	1281	Open in IMG/M
3300012987\|Ga0164307_10008972	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	4782	Open in IMG/M
3300012987\|Ga0164307_11665298	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300013100\|Ga0157373_11247744	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300013102\|Ga0157371_10127898	All Organisms → cellular organisms → Bacteria	1807	Open in IMG/M
3300013104\|Ga0157370_10479378	All Organisms → cellular organisms → Bacteria	1143	Open in IMG/M
3300013104\|Ga0157370_11204452	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300013105\|Ga0157369_10130095	All Organisms → cellular organisms → Bacteria	2668	Open in IMG/M
3300013307\|Ga0157372_10800877	All Organisms → cellular organisms → Bacteria	1095	Open in IMG/M
3300013308\|Ga0157375_13448264	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300014326\|Ga0157380_13491837	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300014969\|Ga0157376_10494498	All Organisms → cellular organisms → Bacteria	1201	Open in IMG/M
3300014969\|Ga0157376_11989563	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	619	Open in IMG/M
3300015262\|Ga0182007_10208115	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300015371\|Ga0132258_10935412	All Organisms → cellular organisms → Bacteria	2189	Open in IMG/M
3300015371\|Ga0132258_12720830	All Organisms → cellular organisms → Bacteria	1234	Open in IMG/M
3300017792\|Ga0163161_10220376	All Organisms → cellular organisms → Bacteria	1469	Open in IMG/M
3300018469\|Ga0190270_11204407	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300018476\|Ga0190274_10022390	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	4175	Open in IMG/M
3300018476\|Ga0190274_11569927	Not Available	750	Open in IMG/M
3300019356\|Ga0173481_10696675	Not Available	548	Open in IMG/M
3300019361\|Ga0173482_10203659	All Organisms → cellular organisms → Bacteria	812	Open in IMG/M
3300020009\|Ga0193740_1030739	Not Available	850	Open in IMG/M
3300021445\|Ga0182009_10017508	All Organisms → cellular organisms → Bacteria	2648	Open in IMG/M
3300021445\|Ga0182009_10309949	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300022756\|Ga0222622_10109890	All Organisms → cellular organisms → Bacteria	1713	Open in IMG/M
3300022756\|Ga0222622_10265256	All Organisms → cellular organisms → Bacteria	1169	Open in IMG/M
3300024055\|Ga0247794_10057391	Not Available	1082	Open in IMG/M
3300025315\|Ga0207697_10040325	All Organisms → cellular organisms → Bacteria	1917	Open in IMG/M
3300025893\|Ga0207682_10011333	All Organisms → cellular organisms → Bacteria	3482	Open in IMG/M
3300025901\|Ga0207688_10340000	All Organisms → cellular organisms → Bacteria	923	Open in IMG/M
3300025907\|Ga0207645_10042818	All Organisms → cellular organisms → Bacteria	2897	Open in IMG/M
3300025907\|Ga0207645_10293329	All Organisms → cellular organisms → Bacteria	1082	Open in IMG/M
3300025909\|Ga0207705_11342493	Not Available	545	Open in IMG/M
3300025919\|Ga0207657_10353388	All Organisms → cellular organisms → Bacteria	1159	Open in IMG/M
3300025921\|Ga0207652_11691636	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300025930\|Ga0207701_11171430	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300025931\|Ga0207644_10222072	All Organisms → cellular organisms → Bacteria	1498	Open in IMG/M
3300025932\|Ga0207690_11283818	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300025933\|Ga0207706_10396528	All Organisms → cellular organisms → Bacteria	1197	Open in IMG/M
3300025940\|Ga0207691_11220591	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300025944\|Ga0207661_10086928	All Organisms → cellular organisms → Bacteria	2595	Open in IMG/M
3300025945\|Ga0207679_11713428	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300025986\|Ga0207658_11425755	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300026041\|Ga0207639_10131332	All Organisms → cellular organisms → Bacteria	2074	Open in IMG/M
3300026067\|Ga0207678_10101808	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2452	Open in IMG/M
3300026078\|Ga0207702_10135968	All Organisms → cellular organisms → Bacteria	2218	Open in IMG/M
3300026142\|Ga0207698_10522230	All Organisms → cellular organisms → Bacteria	1159	Open in IMG/M
3300026306\|Ga0209468_1048844	All Organisms → cellular organisms → Bacteria	1438	Open in IMG/M
3300027639\|Ga0209387_1045373	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	950	Open in IMG/M
3300031824\|Ga0307413_11704993	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	562	Open in IMG/M
3300031903\|Ga0307407_10442539	All Organisms → cellular organisms → Bacteria	941	Open in IMG/M
3300031903\|Ga0307407_10721186	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300031911\|Ga0307412_10452073	All Organisms → cellular organisms → Bacteria	1059	Open in IMG/M
3300031938\|Ga0308175_100097274	All Organisms → cellular organisms → Bacteria	2701	Open in IMG/M
3300031938\|Ga0308175_100354921	All Organisms → cellular organisms → Bacteria	1516	Open in IMG/M
3300031996\|Ga0308176_10340079	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1477	Open in IMG/M
3300031996\|Ga0308176_11261167	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300032005\|Ga0307411_10079106	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2256	Open in IMG/M
3300032074\|Ga0308173_11431253	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300032126\|Ga0307415_100338502	All Organisms → cellular organisms → Bacteria	1262	Open in IMG/M
3300032126\|Ga0307415_100867342	Not Available	829	Open in IMG/M
3300033412\|Ga0310810_10005962	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	13705	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	54.55%
Environmental	Environmental	45.45%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	54.55%
Terrestrial	Environmental → Terrestrial	43.94%
Aquatic	Environmental → Aquatic	1.52%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	43.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere	37.88%
Rhizoplane	Host-Associated → Plants → Rhizoplane	15.91%
Sediment	Environmental → Aquatic → Sediment	1.52%
Roots	Host-Associated → Plants → Roots	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	36.36%
Soil	Host-Associated → Plants → Rhizosphere → Soil	22.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.15%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	13.64%
Loam	Environmental → Terrestrial → Soil → Loam	7.58%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.27%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.52%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	22.73%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.15%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	13.64%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.58%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.82%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.06%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.27%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.52%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.12%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	9.09%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	7.58%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	5.30%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.30%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	5.30%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	5.30%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	5.30%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	5.30%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.55%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	4.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.03%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.27%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.27%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.27%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.52%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.52%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.52%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.52%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.76%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.76%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.76%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002075	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015262	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300020009	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s1	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300027639	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control (SPAdes)	Environmental	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPgaii200_06434781	2228664022	Soil	MSDEIPTSTKARVRRQPPVPLTLAVFLASVVGFMAVV
INPhiseqgaiiFebDRAFT_1014668402	3300000364	Soil	MSDEIPTSTKARVRRQPPVPLTLAVFLASVVGFMAVVTGLFELLRYLGGWR*
INPhiseqgaiiFebDRAFT_1014680511	3300000364	Soil	MSDDTPTSNKARVRRLPPVPLTLAVFLASVVGFMAVV
JGI1027J11758_123993382	3300000789	Soil	MSDDTPTSNKARVRRLPPVPLTLAVFLASVVGFMAVVTGLFALLRYLGGWR*
JGI1027J12803_1052710752	3300000955	Soil	MSDEIPTSTKARVRRQPPVPLTLAVFLASVVGFMAVVTGLFELL
JGI24738J21930_101622791	3300002075	Corn Rhizosphere	ARVRRQPPVPLTLAVFIASVVGFMLVVTGLFALVRYLGGWR*
Ga0062593_1000051255	3300004114	Soil	MTDENPDVDKTRTRRQPPVPVTLAVFLASVVGFMLVVTGLFALMRYLGGR*
Ga0062590_1020477961	3300004157	Soil	MSDDTPNSNKERVRRQPPVSLTLAVFLASVVGFMIVVTGLFALLRFLGGWR*
Ga0063356_1005624272	3300004463	Arabidopsis Thaliana Rhizosphere	MTDETPDADKVRIRRQPPVPLALAVFLASVVGFMLVVTGLFALMRYIGKH*
Ga0063356_1017619142	3300004463	Arabidopsis Thaliana Rhizosphere	MPHLLLPPLMTDETPDADKIRIRRQPPVPVAFAVFLASVVGFMVVVAGLFALMRYLGKH*
Ga0063356_1020469961	3300004463	Arabidopsis Thaliana Rhizosphere	MIPPLLMTDETPDSDKVRIRRQPPVAVALGVFVASVVGFMLVVTGLFALMRYLGKH*
Ga0062592_1012878671	3300004480	Soil	PLMTDETPDVEKVRIRRQPPVPVAFAVFLASVVGFMVVVAGLFALMRYLGKH*
Ga0062591_1017802721	3300004643	Soil	MLQPLPPKSMTDENPEAAKSRSRRQPPVPLAFAVFAAAVVGFMAVVAGLFALLRLLGGSH
Ga0062594_1005299742	3300005093	Soil	MTDETPDADKVRIRRQPPVPLALAAFAASVVGFMLVVTGLFALMRYLGKH*
Ga0062594_1009622532	3300005093	Soil	MSDDLPTSNKARVRRQPPVPLTLAVFIASVVGFMLVVTGLFALVRYLGGWR*
Ga0070658_104982023	3300005327	Corn Rhizosphere	MSDDLPTSNKARVRRQPPVPLTLAVFLASVVGFMVVVAGLFALVRYLGGWR*
Ga0070676_104231051	3300005328	Miscanthus Rhizosphere	PTSNKTRVRRQPPVPVTLAVFLASIVGFMLVVTGLFALLRYLGGWR*
Ga0070676_104386612	3300005328	Miscanthus Rhizosphere	MSDDTPNSDKERVRRQPPVSLTLAVFLAAVVGFMIVVTGLFALLRFLGGWR*
Ga0070683_1005736202	3300005329	Corn Rhizosphere	MSDDVPTSNKTRVRRQPPVPVTLAVFLASVVGFMLVVTGLFALLRYLGGWR*
Ga0070670_1010658612	3300005331	Switchgrass Rhizosphere	PAFPLHQGFMSDDVPTSDKARVRRQPPVPVTLAVFLASVVGFMLVVTGLFALLRYLGGWR
Ga0070682_1010656041	3300005337	Corn Rhizosphere	LMSDDLPTSNKARVRRQPPVPLTLAVFIASVVGFMLVVTGLFALVRYLGGWR*
Ga0070682_1018981481	3300005337	Corn Rhizosphere	LMSDDLPTSNKARVRRQPPVPLTLAVFLASVVGFMVVVAGLFALVRYLGGWR*
Ga0068868_1001634362	3300005338	Miscanthus Rhizosphere	LLHQDIMSDDTPTSGKARVRRQPPVPVTLAVFLASVVGFMAVVTGLFSLLRYLGGWR*
Ga0070660_1001181674	3300005339	Corn Rhizosphere	MSDDTPTSGKARVRRQPPVPVTLAVFLASVVGFMAVVTGLFSLLRYLGGWR*
Ga0070660_1018629521	3300005339	Corn Rhizosphere	MSDDTPNSNKERVRRQPPVSLTLALFLASVVGFMIVVTGLFA
Ga0070692_113776642	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MPHLLLPPLMTDETPDVEKVRIRRQPPVPVAFAVFLASVVGFMVVFAGLFALMRYLGKH*
Ga0070668_1000045468	3300005347	Switchgrass Rhizosphere	MSDDVPTSNKTRVRRQPPVPVTLAVFLASIVGFMLVVTGLFALLRYLGGWR*
Ga0070671_1002098823	3300005355	Switchgrass Rhizosphere	MSDDTPTSGKARDRRQPPVPVTLAVFLASVVGFMAVVTGLFSLLRYLGGWR*
Ga0070674_1002677253	3300005356	Miscanthus Rhizosphere	MTDETPDADKARIRRQPPVPLALAVFLASVVGFMVVVTGL
Ga0070674_1018434481	3300005356	Miscanthus Rhizosphere	LMTDETPDVEKVRIRRQPPVPVAFAVFLASVVGFMVVVAGLFALMRYLGKH*
Ga0070673_1004420231	3300005364	Switchgrass Rhizosphere	MTDETPDVEKVRIRRQPPVPVAFAVFLASVVGFMVVVAGLFALMRYLGKH*
Ga0070659_1017528442	3300005366	Corn Rhizosphere	MSDDNPTTNNARVRRQPPVPLTLAVFIASVVGFMVVVTGLFALLRYLGGWR*
Ga0068867_1009125162	3300005459	Miscanthus Rhizosphere	VEKVRIRRQPPVPVAFAVFLASVVGFMVVVAGLFALMRYLGKH*
Ga0070699_1001363823	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MSDESPDLNKVRIRRQPPVPLAFIVFAASVVGFMIVVTGLFALLRFLGGSH*
Ga0070679_1016901751	3300005530	Corn Rhizosphere	KARVRRQPPVPLTLAVFLASVVGFMVVVAGLFALVRYLGGWR*
Ga0070684_1000300654	3300005535	Corn Rhizosphere	MSDDVPTSDKARVRRQPPVPVTLAVFLASVVGFMLVVTGLFALLRYLGGWR*
Ga0070672_1009502862	3300005543	Miscanthus Rhizosphere	GFMSDDVPTSNKTRVRRQPPVPVTLAVFLASVVGFMLVVTGLFALLRYLGGWR*
Ga0070672_1016512681	3300005543	Miscanthus Rhizosphere	MTDETPDADKVRIRRQPPVPLALAAFAASVVGFMLVVTGLF
Ga0070664_1006642343	3300005564	Corn Rhizosphere	GHSPLSLLMTDETPDADKARIRRQPPVPLALAVFLASVVGFMVVVTGLFALMRYIGKH*
Ga0070664_1021100991	3300005564	Corn Rhizosphere	VRVRRQPPVPVTLAVFLASVVGFMIVVTGLFAIMRYLGKH*
Ga0066693_102930322	3300005566	Soil	MTDDTPDVDKARVRRQPRVPVTLAVFLASVVGFMLVVTGLFALMRFLGKH*
Ga0068854_1017125121	3300005578	Corn Rhizosphere	MSDDLPTSNKARVRRQPPVPLTLAVFIASVVGFMLVVTGLFALLRYLGGWR*
Ga0068856_1004376681	3300005614	Corn Rhizosphere	MSDDIPTSNETRVRRQPPVPLTLAIFLASVVGFMVVVTGLFALLRYLGGWR*
Ga0070702_1015378151	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	ADKVRIRRQPPVPLALAAFAASVVGFMLVVTGLFALMRYLGKH*
Ga0068852_1004082291	3300005616	Corn Rhizosphere	QGFMSDDVPTSNKTRVRRQPPVPVTLAVFLASIVGFMLVVTGLFALLRYLGGWR*
Ga0068870_107083681	3300005840	Miscanthus Rhizosphere	PLMTDETPDADKVRIRRQPPVPLALAAFAASVVGFMLVVTGLFALMRYLGKH*
Ga0068870_111155371	3300005840	Miscanthus Rhizosphere	PDKVRVRRQPPVPVTLAVFLASVVGFMIVVTGLFAIMRYLGKH*
Ga0068858_1001002231	3300005842	Switchgrass Rhizosphere	AFPLHQGFMSDDVPTSNKTRVRRQPPVPVTLAVFLASIVGFMLVVTGLFALLRYLGGWR*
Ga0097621_1009552921	3300006237	Miscanthus Rhizosphere	GFMSDDVPTSDKARVRRQPPVPVTLAVFLASVVGFMLVVTGLFALLRYLGGWR*
Ga0079222_103467992	3300006755	Agricultural Soil	MSDEGPTSNKTRVRRQPPVPLTLAVFLASIVGFMVVVTGLFALLRYLGGWR*
Ga0111538_100300832	3300009156	Populus Rhizosphere	MTEENPDKVRVRRQPPVPVTLAVFLASVVGFMVVVAGLFALMRYLGRH*
Ga0105248_105783231	3300009177	Switchgrass Rhizosphere	KARVRRQPPVPVTLAVFLASVVGFMAVVTGLFSLLRYLGGWR*
Ga0126307_101015072	3300009789	Serpentine Soil	MTDETPDSDKVRVRRQPPVPLTLAVFLGAVVAFTVVVAALFALMRYLDGR*
Ga0126307_101749312	3300009789	Serpentine Soil	MTDETPDRDKVRIRRQPPVPLTLAVFLASIVGFMIVVAGLFALMRFLDGR*
Ga0126307_102496722	3300009789	Serpentine Soil	MTDETPDSDKARIRRQPPVPLTLAVFLASVVTFTVVVAALFALMRYLDGR*
Ga0126313_100257546	3300009840	Serpentine Soil	MTDETPDSEKARVRRQPPVPLTLAVFLASVVAFTVVVAALFALMRYLDGR*
Ga0126309_108815232	3300010039	Serpentine Soil	MTDETPDSDKDRGRRQPPVPLTLAVFLASIVGFMLVVAGLFSLMRYLDGR*
Ga0126311_100830734	3300010045	Serpentine Soil	MTDETPDSEKARVRRQPPVPLTLAVFLASVVAFTVVVA
Ga0126306_100224264	3300010166	Serpentine Soil	MTDETPDSDKVRIRRQPPVPLTLAVFLASVVTFTVVVAALFALMRYLDGR*
Ga0134127_122955572	3300010399	Terrestrial Soil	MSDDVPTSNKTRVRRQPPVPVTLAVFLASIVGFILVVTGLFALLRYLGGWR*
Ga0150985_1114878832	3300012212	Avena Fatua Rhizosphere	MSDDTPNSSKERVRRQPPVPLTLAVFFASVVGFMLVVAGVFAVFRFLGGWR*
Ga0150984_1080151341	3300012469	Avena Fatua Rhizosphere	MTDEVPTSNKDRVRRQPPVPVTLAVFLASVVGFMLVVTGLFALLRYLGGWR*
Ga0157293_101124752	3300012898	Soil	MTDETPDADKARIRRQPHVPLALAVFLASVVGFMVVVTGLFALMRYIGKH*
Ga0157301_104635502	3300012911	Soil	MTDETPDADKARIRRQPPVPLALAVFLASVVGFMVVVTGLFALMRYIGKH*
Ga0164298_100402054	3300012955	Soil	MSDDVPTSNKTRARRQPPVPVALAVFLASIVGFMLVVTGLFALLRYLGGWR*
Ga0164298_111940571	3300012955	Soil	LLHQDIMSDDTPTSGKARDRRQPPVPVTLAVFLASVVGFMAVVTGLFSLLRYLGGWR*
Ga0164303_102706402	3300012957	Soil	MSDDVPTSNKTRVRRQPPVPVTLAVFLASIVGFMLVVTGLFTLLRYLGGWR*
Ga0164299_115047912	3300012958	Soil	MSDDTPTSNKARVRRQPPVPVTLAVFLASIAGFMLVVAGLFAVLRYLGGWR*
Ga0164301_101969481	3300012960	Soil	AFPLHQGFMSDDVPTSNKTRVRRQPPVPVTLAVFLASVVGFMLVVTGLFALLRYLGGWR*
Ga0164307_100089726	3300012987	Soil	MSDDVPTSNKTRARRQPPVPVTLAVFLASIVGFMLVVTGLFALLRYLGGWR*
Ga0164307_116652981	3300012987	Soil	LFSYPAFQLHKILMSDDLPTSNKAHVRRQPPVPLTLAVFFASVVGFMIVVAGLFALLRYLGGWR*
Ga0157373_112477442	3300013100	Corn Rhizosphere	LLPYLLPLHPILMSDDNPTSNKARVRRQPPVPLTLAVFIVSVVGFMVVVTGLFALLRYLGGWR*
Ga0157371_101278981	3300013102	Corn Rhizosphere	PDLMSDDLPTSNKARVRRQPPVPLTLAVFIASVVGFMLVVTGLFALVRYLGGWR*
Ga0157370_104793782	3300013104	Corn Rhizosphere	MSDEGPTSNKTRVRRQPPVPLTLAVFLASVVGFMVVVTGLFALLRYLGGWR*
Ga0157370_112044522	3300013104	Corn Rhizosphere	MSDDIPTSDKTRVRRQPPVPLTLAIFLASVVGFMLVVTGLFALLRYLGGWR*
Ga0157369_101300952	3300013105	Corn Rhizosphere	MSDDLPTSNKARVRRQPPVPLTLAVFLASVVGFMVVVAGLFALMRYLGGWR*
Ga0157372_108008773	3300013307	Corn Rhizosphere	MSDDVPTSDKARVRRQPPVPVTLAVFLASVVGFMVVVAGLFALVRYLGGWR*
Ga0157375_134482641	3300013308	Miscanthus Rhizosphere	LLHQDIMSDDTPTSGKERVRPQPPVPVTLAVFLASVVGFMAVVTALFSLLR
Ga0157380_134918371	3300014326	Switchgrass Rhizosphere	SLLLPLHMTEENPDKVRVRRQPPVPVTLAVFLASIVGFMVVVAGLFALMRYLGRH*
Ga0157376_104944981	3300014969	Miscanthus Rhizosphere	LLHQDIMSDDTPTSGKARVRRQPPVPVTLAVFLASVVGFMAVVTGLF
Ga0157376_119895632	3300014969	Miscanthus Rhizosphere	MSEDTPTPTKARRQPPVPLTLAVFLASVVGFMAVVTGLFSLLRYLGGWR*
Ga0182007_102081152	3300015262	Rhizosphere	MTDQTPEADKVRTRRQPRVPVTLAVFLASIVGFMLVVTGLFAFMRYLGKH*
Ga0132258_109354122	3300015371	Arabidopsis Rhizosphere	LLHQDFMSDDTPTSNKARARRQPPVPLTLALFLASVAGFMLVVAGLFAALRYLGGWR*
Ga0132258_127208301	3300015371	Arabidopsis Rhizosphere	PTPNKTHARRQPPVPVTLAVFLASVVGFMVLVTGLFALLRYLGGWR*
Ga0163161_102203763	3300017792	Switchgrass Rhizosphere	MSDDVPTSNKTRVRRQPPVPVTLAVFLASIVGFMLVVTGLFALLRYLGGWR
Ga0190270_112044072	3300018469	Soil	MLSPLLMTDETPDADKVRIRRQPPVPLAFAVFLASVVGFMLVVTGLFALLRYLGKH
Ga0190274_100223903	3300018476	Soil	MTDETPDADKARIRRQPPVPLALAVFLASVVGFMLVVTGLFALMRYLGKH
Ga0190274_115699271	3300018476	Soil	SRSPLLSHPSLLMSDETPDLNKERLRRQPPVPLTFAAFAAAVVGFMIVVAGLFALLRFLGGSH
Ga0173481_106966751	3300019356	Soil	PDADKARIRRQPPVPLALAVFLASVVGFMVVVTGLFALMRYIGKH
Ga0173482_102036591	3300019361	Soil	ENPDKVRVRRQPPVPVTFAVFLASVVGFMLVVTGLFALLRYLGKH
Ga0193740_10307392	3300020009	Soil	DAAHDSPLLMTDETPDADKVRIRRQAPVPVALALFLASVVGFMLVVTGLFALMRYLGKH
Ga0182009_100175084	3300021445	Soil	MSDEGPTSNKTRVRRQPPVPLTFAVFLASVVGFMVVVTGLFALLRYLGGWR
Ga0182009_103099492	3300021445	Soil	MTDQTPEADKVRTRRQPRVPVTLAVFLASIVGFMLVVTGLFAFMRYLGKH
Ga0222622_101098904	3300022756	Groundwater Sediment	MSDDTPNSDKERVRRQPPVPLTLAVFLAAVVGFMIVVTGLFALLRFLGGWR
Ga0222622_102652561	3300022756	Groundwater Sediment	DETPDADKARIRRQPPVPLALAVFLASVVGFMLVVTGLFALMRYLGKH
Ga0247794_100573911	3300024055	Soil	MSDDLPTSNKARVRRQPPVPLTLAVFIASVVGFMLVVTGLFALVRYLGGWR
Ga0207697_100403251	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	TPLLLPLHMTEENPDKVRVRRQPPVPVTLAVFLASVVGFMVVVAGLFALMRYLGRH
Ga0207682_100113335	3300025893	Miscanthus Rhizosphere	MTDETPDAAKVRIRRQPPVPLALAAFAASVVGFMLVVTGLFALMRYLGKH
Ga0207688_103400002	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MTDETPDADKVRIRRQPPVPLALAAFAASVVGFMLVVTGLFALMRYLGKH
Ga0207645_100428184	3300025907	Miscanthus Rhizosphere	MSDDTPNSNKERVRRQPPVSLTLAVFLASVVGFMIVVTGLFALLRFLGGWR
Ga0207645_102933292	3300025907	Miscanthus Rhizosphere	MSDDTPTSGKARVRRQPPVPVTLAVFLASVVGFMAVVTGLFSLLRYLGGWR
Ga0207705_113424932	3300025909	Corn Rhizosphere	MSDDLPTSNKARVRRQPPVPLTLAVFLASVVGFMVVVAGLFALVRYLGGWR
Ga0207657_103533881	3300025919	Corn Rhizosphere	SCFPASPDLMSDDLPTSNKARVRRQPPVPLTLAVFIASVVGFMLVVTGLFALVRYLGGWR
Ga0207652_116916362	3300025921	Corn Rhizosphere	SDDLPTSNKARVRRQPPVPLTLAVFLASVVGFMVVVAGLFALVRYLGGWR
Ga0207650_113524872	3300025925	Switchgrass Rhizosphere	VRRQPPVPLTLAVFIASVVGFMLVVTGLFALVRYLGGWR
Ga0207701_111714302	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MTDETPDVEKVRIRRQPPVPVAFAVFLASVVGFMVVVAGLFALMRYLGKH
Ga0207644_102220723	3300025931	Switchgrass Rhizosphere	MSDDTPTSGKARDRRQPPVPVTLAVFLASVVGFMAVVTGLFSLLRYLGGWR
Ga0207690_112838181	3300025932	Corn Rhizosphere	SIRLLSYPLPLHQILMSDDNPTTNNARVRRQPPVPLTLAVFIASVVGFMVVVTGLFALLRYLGGWR
Ga0207706_103965282	3300025933	Corn Rhizosphere	MSDDTPNSDKERVRRQPPVSLTLAVFLASVVGFMIVVTGLFALLRFLGGWR
Ga0207691_112205911	3300025940	Miscanthus Rhizosphere	MTDETPDADKVRIRRQPPVPLALAAFAASVVGFMLVVTGLFALMRYL
Ga0207661_100869283	3300025944	Corn Rhizosphere	MSDDVPTSDKARVRRQPPVPVTLAVFLASVVGFMLVVTGLFALLRYLGGWR
Ga0207679_117134282	3300025945	Corn Rhizosphere	MTDQTPDADKVRTRHQPRVPVTLAVFLASIVGFMLVVTGLFAFMRYLGKH
Ga0207658_114257551	3300025986	Switchgrass Rhizosphere	AFPLHQGFMSDDVPTSNKTRARRQPPVPVTLAVFLASIVGFMLVVTGLFALLRYLGGWR
Ga0207639_101313322	3300026041	Corn Rhizosphere	MSDDNPTTNNARVRRQPPVPLTLAVFIASVVGFMVVVTGLFALLRYLGGWR
Ga0207678_101018085	3300026067	Corn Rhizosphere	LHQGFMSDDVPTSNKTRVRRQPPVPVTLAVFLASVVGFMLVVTGLFALLRYLGGWR
Ga0207702_101359681	3300026078	Corn Rhizosphere	MSDDIPTSNETRVRRQPPVPLTLAIFLASVVGFMVVVTGLFALLRYLGGWR
Ga0207698_105222303	3300026142	Corn Rhizosphere	QGFMSDDVPTSNKTRVRRQPPVPVTLAVFLASVVGFMLVVTGLFALLRYLGGWR
Ga0209468_10488443	3300026306	Soil	MTDDTPDVDKARVRRQPRVPVTLAVFLASVVGFMLVVTGLFALMRFLGKH
Ga0209387_10453732	3300027639	Agricultural Soil	MTDETPDLDKVRIRRQPPVPLTLAVFLGAILGFLVVVTGLFTLLRFLGGH
Ga0307413_117049932	3300031824	Rhizosphere	MTDETPDADKIRIRRQPPVPVAFAVFLASVVGFMVVVAGLFALMRYLGKH
Ga0307407_104425393	3300031903	Rhizosphere	PDPEKVRIRRQPPVPLTLALFLAAVLGFLVVVTGLFTLFRFLDGR
Ga0307407_107211862	3300031903	Rhizosphere	MTDETPDHNKVRIRRQPPVPLTLAVFLASIVGFLVVVAGLFALLRFLGGH
Ga0307412_104520732	3300031911	Rhizosphere	MTDQTPEGDKAPIRRQAPVPLALLLFLASVAGFMIVVTGLFALLRYLGGH
Ga0308175_1000972743	3300031938	Soil	MSDEGPTSNKTRVRRQPPVPLTLAVFLASIVGFMVVVTGLFALLRYLGGWR
Ga0308175_1003549212	3300031938	Soil	MSDEVPTSNKTRVRRQPPVPLTLVVFLASIVGFMVVVTGLFALLRYLGGWR
Ga0308176_103400791	3300031996	Soil	MTDETPDADKVRIRRQPPVPVTLVVFLASIAGFMIVVV
Ga0308176_112611672	3300031996	Soil	MSDDLPTSNKARVRRQPPVPLTLALFLASVVGFMVVVAGLFALLRYLGGWR
Ga0307411_100791064	3300032005	Rhizosphere	MNDEPPDPEKVRIRRQPPVPLTLALFLAAVLGFLVVVTGLFTLFRFLGGR
Ga0308173_114312532	3300032074	Soil	MSDDTPTSSKERVRRQPPVTLTLAVFLASVVGFMVVVTGLFALLRFLGGSR
Ga0307415_1003385022	3300032126	Rhizosphere	LLHDQLMTDQTPEGDKAPIRRQAPVPLALLLFLASVAGFMIVVTGLFALLRYLGGH
Ga0307415_1008673423	3300032126	Rhizosphere	LLMNDEPPDPEKVRIRRQPPVPLTLALFLAAVLGFLVVVTGLFTLFRFLDGR
Ga0310810_100059624	3300033412	Soil	VTHPTHLRSMSDETPRSDKERNRRQAPIPLTFALFAASVVGFMVVVAGIFALMRFLGGSR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F060991

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences