Metagenome / Metatranscriptome Family F060961

Basic Information
Family ID	F060961
Family Type	Metagenome / Metatranscriptome
Number of Sequences	132
Average Sequence Length	43 residues
Representative Sequence	MPDAVPAPTRDIVVVHSSDLHLDHDYTARLHGGDGTAGLAGVL
Number of Associated Samples	116
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	33.33 %
% of genes near scaffold ends (potentially truncated)	99.24 %
% of genes from short scaffolds (< 2000 bps)	91.67 %
Associated GOLD sequencing projects	113
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.26

Most Common Taxonomy
Group	Bacteria (95.455 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (17.424 % of family members)
Environment Ontology (ENVO)	Unclassified (18.939 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.212 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 25.35% β-sheet: 0.00% Coil/Unstructured: 74.65%
Feature Viewer

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Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF03401	TctC	28.03
PF07238	PilZ	11.36
PF01039	Carboxyl_trans	4.55
PF02627	CMD	3.03
PF00248	Aldo_ket_red	1.52
PF06736	TMEM175	1.52
PF01323	DSBA	1.52
PF00892	EamA	1.52
PF01124	MAPEG	0.76
PF08241	Methyltransf_11	0.76
PF06574	FAD_syn	0.76
PF04909	Amidohydro_2	0.76
PF02464	CinA	0.76
PF05598	DUF772	0.76
PF01042	Ribonuc_L-PSP	0.76

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	28.03
COG0777	Acetyl-CoA carboxylase beta subunit	Lipid transport and metabolism [I]	4.55
COG0825	Acetyl-CoA carboxylase alpha subunit	Lipid transport and metabolism [I]	4.55
COG4799	Acetyl-CoA carboxylase, carboxyltransferase component	Lipid transport and metabolism [I]	4.55
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	3.03
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	3.03
COG3548	Uncharacterized membrane protein	Function unknown [S]	1.52
COG0196	FAD synthase	Coenzyme transport and metabolism [H]	0.76
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.76
COG1546	Nicotinamide mononucleotide (NMN) deamidase PncC	Coenzyme transport and metabolism [H]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.45 %
Unclassified	root	N/A	4.55 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.45 %
Unclassified	root	N/A	4.55 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.45 %
Unclassified	root	N/A	4.55 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	90.91 %
Unclassified	root	N/A	4.55 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	59.85 %
Unclassified	root	N/A	4.55 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.52 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	16.67 %
Unclassified	root	N/A	4.55 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	2.27 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.52 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.52 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis	6.06 %
Unclassified	root	N/A	4.55 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	1.52 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1.52 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.52 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.52 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.76 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.76 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.76 %

Name	Rank	Taxonomy	Distribution
Pseudorhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes	6.06 %
Unclassified	root	N/A	4.55 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	1.52 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1.52 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.52 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.52 %
Rhodopila	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	0.76 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.76 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.76 %

Name	Rank	Taxonomy	Distribution
Pseudorhodoplanes sinuspersici	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	6.06 %
Unclassified	root	N/A	4.55 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	1.52 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1.52 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.52 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.52 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.76 %
Rhodopila	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	0.76 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908009\|FWIRA_GRAM18401CAFHR	All Organisms → cellular organisms → Bacteria → Proteobacteria	522	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101738741	All Organisms → cellular organisms → Bacteria	1781	Open in IMG/M
3300000732\|JGI12023J11887_1012828	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	508	Open in IMG/M
3300000956\|JGI10216J12902_116759568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1717	Open in IMG/M
3300002245\|JGIcombinedJ26739_100171140	All Organisms → cellular organisms → Bacteria → Proteobacteria	2054	Open in IMG/M
3300005332\|Ga0066388_102054031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1026	Open in IMG/M
3300005341\|Ga0070691_10076541	All Organisms → cellular organisms → Bacteria → Proteobacteria	1631	Open in IMG/M
3300005558\|Ga0066698_10523605	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	805	Open in IMG/M
3300005713\|Ga0066905_100062705	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2347	Open in IMG/M
3300005713\|Ga0066905_101080078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	712	Open in IMG/M
3300005713\|Ga0066905_102255247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	508	Open in IMG/M
3300005764\|Ga0066903_101643817	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1220	Open in IMG/M
3300005764\|Ga0066903_109026061	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	505	Open in IMG/M
3300005937\|Ga0081455_10269176	All Organisms → cellular organisms → Bacteria → Proteobacteria	1237	Open in IMG/M
3300006046\|Ga0066652_101125552	All Organisms → cellular organisms → Bacteria → Proteobacteria	744	Open in IMG/M
3300006354\|Ga0075021_10532999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	746	Open in IMG/M
3300006606\|Ga0074062_12848041	All Organisms → cellular organisms → Bacteria → Proteobacteria	1517	Open in IMG/M
3300006845\|Ga0075421_100253996	All Organisms → cellular organisms → Bacteria → Proteobacteria	2154	Open in IMG/M
3300006846\|Ga0075430_100858564	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	748	Open in IMG/M
3300006846\|Ga0075430_100950238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	708	Open in IMG/M
3300006872\|Ga0101947_1090860	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300007788\|Ga0099795_10286065	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	721	Open in IMG/M
3300009012\|Ga0066710_104486458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	522	Open in IMG/M
3300009100\|Ga0075418_10425472	All Organisms → cellular organisms → Bacteria → Proteobacteria	1422	Open in IMG/M
3300009101\|Ga0105247_11677545	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	525	Open in IMG/M
3300009162\|Ga0075423_11545167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	713	Open in IMG/M
3300009792\|Ga0126374_10635463	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	793	Open in IMG/M
3300009836\|Ga0105068_1071859	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	647	Open in IMG/M
3300010047\|Ga0126382_11735210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	584	Open in IMG/M
3300010162\|Ga0131853_10818118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	747	Open in IMG/M
3300010359\|Ga0126376_11788299	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	652	Open in IMG/M
3300010361\|Ga0126378_11559298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	749	Open in IMG/M
3300010362\|Ga0126377_10288298	All Organisms → cellular organisms → Bacteria → Proteobacteria	1614	Open in IMG/M
3300010366\|Ga0126379_10944028	All Organisms → cellular organisms → Bacteria → Proteobacteria	966	Open in IMG/M
3300010366\|Ga0126379_11373287	All Organisms → cellular organisms → Bacteria → Proteobacteria	812	Open in IMG/M
3300010371\|Ga0134125_10456781	Not Available	1416	Open in IMG/M
3300010371\|Ga0134125_10785259	Not Available	1048	Open in IMG/M
3300010376\|Ga0126381_104751414	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	523	Open in IMG/M
3300011120\|Ga0150983_16391375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	552	Open in IMG/M
3300012199\|Ga0137383_10110080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2004	Open in IMG/M
3300012204\|Ga0137374_10276698	All Organisms → cellular organisms → Bacteria → Proteobacteria	1391	Open in IMG/M
3300012206\|Ga0137380_11130639	All Organisms → cellular organisms → Bacteria → Proteobacteria	667	Open in IMG/M
3300012212\|Ga0150985_107094637	All Organisms → cellular organisms → Bacteria → Proteobacteria	572	Open in IMG/M
3300012212\|Ga0150985_120645623	All Organisms → cellular organisms → Bacteria → Proteobacteria	759	Open in IMG/M
3300012354\|Ga0137366_11255728	All Organisms → cellular organisms → Bacteria → Proteobacteria	501	Open in IMG/M
3300012362\|Ga0137361_11180966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	687	Open in IMG/M
3300012363\|Ga0137390_10464327	All Organisms → cellular organisms → Bacteria	1241	Open in IMG/M
3300012685\|Ga0137397_10983922	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	622	Open in IMG/M
3300012909\|Ga0157290_10136679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	770	Open in IMG/M
3300012929\|Ga0137404_11947720	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	548	Open in IMG/M
3300012944\|Ga0137410_11906803	All Organisms → cellular organisms → Bacteria → Proteobacteria	526	Open in IMG/M
3300012957\|Ga0164303_10855190	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	632	Open in IMG/M
3300012958\|Ga0164299_10098913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	1511	Open in IMG/M
3300014501\|Ga0182024_10231456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	2495	Open in IMG/M
3300014501\|Ga0182024_10979294	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1011	Open in IMG/M
3300014501\|Ga0182024_12672874	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	534	Open in IMG/M
3300014501\|Ga0182024_12801935	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	519	Open in IMG/M
3300014657\|Ga0181522_10207533	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1154	Open in IMG/M
3300015242\|Ga0137412_11153268	All Organisms → cellular organisms → Bacteria → Proteobacteria	546	Open in IMG/M
3300015371\|Ga0132258_10588514	All Organisms → cellular organisms → Bacteria → Proteobacteria	2792	Open in IMG/M
3300015374\|Ga0132255_104765149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	575	Open in IMG/M
3300016294\|Ga0182041_10387320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1186	Open in IMG/M
3300016319\|Ga0182033_10472525	All Organisms → cellular organisms → Bacteria → Proteobacteria	1073	Open in IMG/M
3300016319\|Ga0182033_11877260	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	544	Open in IMG/M
3300017970\|Ga0187783_10445392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	940	Open in IMG/M
3300018044\|Ga0187890_10002500	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	12818	Open in IMG/M
3300018051\|Ga0184620_10131367	All Organisms → cellular organisms → Bacteria → Proteobacteria	797	Open in IMG/M
3300018062\|Ga0187784_10107807	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2269	Open in IMG/M
3300018468\|Ga0066662_11484357	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	705	Open in IMG/M
3300018476\|Ga0190274_13477449	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	531	Open in IMG/M
3300020016\|Ga0193696_1127458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	642	Open in IMG/M
3300020581\|Ga0210399_10899701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	718	Open in IMG/M
3300020583\|Ga0210401_10933638	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	726	Open in IMG/M
3300021078\|Ga0210381_10037575	Not Available	1397	Open in IMG/M
3300021377\|Ga0213874_10140241	Not Available	836	Open in IMG/M
3300021384\|Ga0213876_10639223	Not Available	566	Open in IMG/M
3300021402\|Ga0210385_11435578	All Organisms → cellular organisms → Bacteria → Proteobacteria	528	Open in IMG/M
3300021474\|Ga0210390_10308674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1340	Open in IMG/M
3300024225\|Ga0224572_1057766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	720	Open in IMG/M
3300025325\|Ga0209341_10404303	Not Available	1106	Open in IMG/M
3300025556\|Ga0210120_1105260	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	563	Open in IMG/M
3300025604\|Ga0207930_1131943	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	548	Open in IMG/M
3300025900\|Ga0207710_10696415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	533	Open in IMG/M
3300025929\|Ga0207664_11356416	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	631	Open in IMG/M
3300026089\|Ga0207648_11044035	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300026557\|Ga0179587_10295012	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1044	Open in IMG/M
3300027616\|Ga0209106_1079958	All Organisms → cellular organisms → Bacteria → Proteobacteria	732	Open in IMG/M
3300027663\|Ga0208990_1004567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4511	Open in IMG/M
3300027703\|Ga0207862_1203375	All Organisms → cellular organisms → Bacteria → Proteobacteria	587	Open in IMG/M
3300027961\|Ga0209853_1154999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	552	Open in IMG/M
3300028380\|Ga0268265_11987564	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	588	Open in IMG/M
3300028536\|Ga0137415_10027893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	5566	Open in IMG/M
3300028709\|Ga0307279_10118882	All Organisms → cellular organisms → Bacteria → Proteobacteria	508	Open in IMG/M
3300028768\|Ga0307280_10028351	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1658	Open in IMG/M
3300028771\|Ga0307320_10055754	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1463	Open in IMG/M
3300028778\|Ga0307288_10058576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1340	Open in IMG/M
3300028811\|Ga0307292_10242508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	747	Open in IMG/M
3300028872\|Ga0307314_10021531	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1475	Open in IMG/M
3300028876\|Ga0307286_10041928	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1536	Open in IMG/M
3300028906\|Ga0308309_10512015	All Organisms → cellular organisms → Bacteria → Proteobacteria	1038	Open in IMG/M
3300028906\|Ga0308309_11244742	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	641	Open in IMG/M
3300030058\|Ga0302179_10099971	All Organisms → cellular organisms → Bacteria → Proteobacteria	1283	Open in IMG/M
3300031091\|Ga0308201_10244195	All Organisms → cellular organisms → Bacteria → Proteobacteria	615	Open in IMG/M
3300031091\|Ga0308201_10302896	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	570	Open in IMG/M
3300031170\|Ga0307498_10022575	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1455	Open in IMG/M
3300031564\|Ga0318573_10268185	All Organisms → cellular organisms → Bacteria → Proteobacteria	911	Open in IMG/M
3300031708\|Ga0310686_111444506	All Organisms → cellular organisms → Bacteria	3265	Open in IMG/M
3300031736\|Ga0318501_10843664	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	509	Open in IMG/M
3300031740\|Ga0307468_102350813	All Organisms → cellular organisms → Bacteria → Proteobacteria	519	Open in IMG/M
3300031763\|Ga0318537_10363471	All Organisms → cellular organisms → Bacteria → Proteobacteria	534	Open in IMG/M
3300031765\|Ga0318554_10319340	All Organisms → cellular organisms → Bacteria → Proteobacteria	883	Open in IMG/M
3300031778\|Ga0318498_10073422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1538	Open in IMG/M
3300031779\|Ga0318566_10459618	All Organisms → cellular organisms → Bacteria → Proteobacteria	625	Open in IMG/M
3300031782\|Ga0318552_10729007	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	506	Open in IMG/M
3300031792\|Ga0318529_10569208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	526	Open in IMG/M
3300031796\|Ga0318576_10292977	All Organisms → cellular organisms → Bacteria → Proteobacteria	768	Open in IMG/M
3300031831\|Ga0318564_10157025	All Organisms → cellular organisms → Bacteria → Proteobacteria	1014	Open in IMG/M
3300031896\|Ga0318551_10530243	All Organisms → cellular organisms → Bacteria → Proteobacteria	677	Open in IMG/M
3300031910\|Ga0306923_10815365	All Organisms → cellular organisms → Bacteria	1029	Open in IMG/M
3300031912\|Ga0306921_10363115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1692	Open in IMG/M
3300031942\|Ga0310916_10421980	All Organisms → cellular organisms → Bacteria → Proteobacteria	1135	Open in IMG/M
3300031945\|Ga0310913_10859730	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	638	Open in IMG/M
3300031954\|Ga0306926_10353472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1816	Open in IMG/M
3300032025\|Ga0318507_10112288	All Organisms → cellular organisms → Bacteria → Proteobacteria	1144	Open in IMG/M
3300032025\|Ga0318507_10268867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	740	Open in IMG/M
3300032044\|Ga0318558_10579832	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	560	Open in IMG/M
3300032065\|Ga0318513_10476257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	610	Open in IMG/M
3300032065\|Ga0318513_10565686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	557	Open in IMG/M
3300032132\|Ga0315336_1084106	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1444	Open in IMG/M
3300032783\|Ga0335079_10518636	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1269	Open in IMG/M
3300032783\|Ga0335079_11858161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	584	Open in IMG/M
3300033289\|Ga0310914_10388138	All Organisms → cellular organisms → Bacteria → Proteobacteria	1263	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.61%
Host-Associated	Host-Associated	13.64%
Engineered	Engineered	0.76%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.30%
Plants	Host-Associated → Plants	12.88%
Aquatic	Environmental → Aquatic	5.30%
Arthropoda	Host-Associated → Arthropoda	0.76%
Built Environment	Engineered → Built Environment	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.55%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.06%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.30%
Freshwater	Environmental → Aquatic → Freshwater	2.27%
Marine	Environmental → Aquatic → Marine	1.52%
Sediment	Environmental → Aquatic → Sediment	1.52%
Roots	Host-Associated → Plants → Roots	1.52%
Peat	Environmental → Terrestrial → Peat	0.76%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.76%
Unclassified	Engineered → Built Environment → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	59.09%
Loam	Environmental → Terrestrial → Soil → Loam	12.88%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.06%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.06%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.03%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.27%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.52%
Sand	Environmental → Terrestrial → Soil → Sand	1.52%
Unclassified	Host-Associated → Plants → Roots → Unclassified	1.52%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.76%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.76%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.76%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.76%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.76%
Unclassified	Engineered → Built Environment → Unclassified → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.06%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	22.73%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.06%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.55%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.03%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.03%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.03%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.27%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.52%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.52%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.52%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	1.52%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.76%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	0.76%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.76%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.76%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.76%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.76%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.76%
Unclassified	Engineered → Built Environment → Unclassified → Unclassified → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.12%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.06%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.30%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.55%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.79%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.03%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	3.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.52%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.52%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.52%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.52%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.52%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.52%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.52%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.52%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.52%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	1.52%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.52%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.76%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.76%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.76%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	0.76%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.76%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.76%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.76%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.76%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.76%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.76%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.76%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.76%
Drinking Water Pipes	Engineered → Built Environment → Unclassified → Unclassified → Unclassified → Drinking Water Pipes	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908009	Soil microbial communities from sample at FACE Site Metagenome WIR_Amb2	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000732	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006872	Biofilm microbial communities from drinking water pipes in Singapore	Engineered	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009836	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010162	Labiotermes labralis P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Lab288 P1 (version 2)	Host-Associated	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012909	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300020016	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300024225	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU5	Host-Associated	Open in IMG/M
3300025325	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2 (SPAdes)	Environmental	Open in IMG/M
3300025556	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025604	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027616	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027663	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300027961	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028709	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_118	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028872	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032132	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - ASW #5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.26
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.26
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F060961

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FWIRA_09993260	2124908009	Soil	MPDAVPAPTRDVVVVHSSDLHLDHDYTARLHGGDGTAGLAGVLTAAR
INPhiseqgaiiFebDRAFT_1017387411	3300000364	Soil	MSLAVPPSARDLTIVHSSDLHLDHDYTARLHGGDGTAG
JGI12023J11887_10128281	3300000732	Forest Soil	MPDAVPPPTRDIVVVHSSDLHLDHDYTARLHGGDGTAGL
JGI10216J12902_1167595681	3300000956	Soil	MKSRDIVIVHSSDLHVDHDYTARMHGGDGTAGLASVLAAA
JGIcombinedJ26739_1001711404	3300002245	Forest Soil	MPHAGAPTKDIVVVHSSDLHIDHDYTARLHGGDGTAGLSGVLSAAGAA
Ga0066388_1020540313	3300005332	Tropical Forest Soil	MPHAGAPTKDIVVVHSSDLHIDHDYTARLHGGDGTAGLSGVLSAARAAG
Ga0070691_100765413	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MPDAVSPPTRDIVVVHSSDLHLDHDYTARLHGGDGTAGLAGVLA
Ga0066698_105236053	3300005558	Soil	MPFAPSRDIVLVHSSDLHMDHDYTARLHGGDGTAGLS
Ga0066905_1000627051	3300005713	Tropical Forest Soil	MPSFRDIVVVHSSDLHMDHDYTARLHGGDGTAGLSSV
Ga0066905_1010800781	3300005713	Tropical Forest Soil	MPHAAPSRDIVVVHSSDVHIDHDYTARLHGGDGTAGLSGVLSA
Ga0066905_1022552471	3300005713	Tropical Forest Soil	MPHAAPSRDIVVVHSSDLHIDHDYTARLHGGDGTAGLS
Ga0066903_1016438173	3300005764	Tropical Forest Soil	MLPAAPSRDIVVVHSSDLHIDHDYTARLHGGDGTAGLSGVLSAARAA
Ga0066903_1090260612	3300005764	Tropical Forest Soil	MPHAPPPPTRDIVVVHSSDLHLDHDYTARLHGGDGTA
Ga0081455_102691764	3300005937	Tabebuia Heterophylla Rhizosphere	MPPPTRDLVVVHSSDLHIDHDYTARLHGGDGTAGLAGVLAAARR
Ga0066652_1011255521	3300006046	Soil	MGLKWVWSATMSPLARDLTVVHSSDLHLDHDYTARL
Ga0075021_105329992	3300006354	Watersheds	VTNNSATRELLLVHSSDLHVDDERIAALHGGDGTAGL
Ga0074062_128480411	3300006606	Soil	MPDAVPAPTRDVVVVHSSDLHLDHDYTARLHGGDGTAGLVGVLAAAR
Ga0075421_1002539965	3300006845	Populus Rhizosphere	MSSKDVIMVHTSDLHVDHDYTAKLHGGDGTAGLACVLNAASRI*
Ga0075430_1008585643	3300006846	Populus Rhizosphere	MLPARDIVVVHSSDLHMDHDYTARLHGGDGTAGLSSVLSA
Ga0075430_1009502383	3300006846	Populus Rhizosphere	MPQALPLATRDVVVVHSSDLHVDHDYTARLHGGDGTAGLKGVLRAAVQAGAD
Ga0101947_10908601	3300006872	Drinking Water Pipes	MRSSRDVVVAHSSDVHVDHEYTARLFEGDGAGGLRAVLTAARKASADLVLLA
Ga0099795_102860651	3300007788	Vadose Zone Soil	MPDAVPAPTRDIVVVHSSDLQLDHDYTARLHGGDGTAGLAGVLAAARH
Ga0066710_1044864581	3300009012	Grasslands Soil	MPFAPPRDIVLVHSSDLHMDHDYTARLHGGDGTAGLSSVLAAARAA
Ga0075418_104254723	3300009100	Populus Rhizosphere	MPHAVPPPARDIVVVHSSDLHLDHDYTARLHGGDGTAGLAGVLAAA
Ga0105247_116775451	3300009101	Switchgrass Rhizosphere	MPDAVSPPTRDVVVIHSSDLHLDHDYTARLHGGDGTAGLVA
Ga0075423_115451673	3300009162	Populus Rhizosphere	MPPSRDIVVVHSSDLHMDHDYTARLHGGDGTAGLSSVLSAARGAGA
Ga0126374_106354631	3300009792	Tropical Forest Soil	MPHAAPSRDIVVVHSSDLHIDHDYTARLHGGDGTAGLSGVLSAARAA
Ga0105068_10718593	3300009836	Groundwater Sand	MDRDIVITHSSDLHVDHDYTARIHGGDGTAGLACVLAA
Ga0126382_117352102	3300010047	Tropical Forest Soil	MPPAAPSRDIVVVHSSDLHIDHDYTARLHGGDGTAGLSG
Ga0131853_108181181	3300010162	Termite Gut	VNDDIVLVHSSDLHVDHDHTEPIYEGDGTAGLRWVLDTARGLDAHAVL
Ga0126376_117882991	3300010359	Tropical Forest Soil	MPLAMPSARDIVVVHSSDVHVDHEYTARLHGGDGTAGRAGVLSAARGAGADA
Ga0126378_115592982	3300010361	Tropical Forest Soil	MTLNNLPSGRDVVVAHSSDLHMDDDHTARLHGGDGAAGLACVLRAASGAG
Ga0126377_102882981	3300010362	Tropical Forest Soil	MSAAMPPPTRDLVVVHSSDLHIDHDYTARLHGGDG
Ga0126379_109440283	3300010366	Tropical Forest Soil	MPPAAPFRDIVVVHSSDLHIDHDYTARLHGGDGTAGLSGVL
Ga0126379_113732871	3300010366	Tropical Forest Soil	MPHAAPSRDIVVVHSSDLHIDHDYTARLHGGDGTAGLSVVLS
Ga0134125_104567811	3300010371	Terrestrial Soil	VTRPARDILLAHSSDLHVDEGLTARQYDGDGTAGLGRVL
Ga0134125_107852591	3300010371	Terrestrial Soil	VNDRDTDDIVLVHSSDLHVDHDHTEPVYDGDGTAG
Ga0126381_1047514142	3300010376	Tropical Forest Soil	MPPAAPSRDIVVVHSSDLHIDHDYTASLHGGDGTAGLSGVL
Ga0150983_163913751	3300011120	Forest Soil	MPLPPSRDIVVVHSSDLHVDHDYTARLHGGDGTAG
Ga0137383_101100804	3300012199	Vadose Zone Soil	MPHAAPSWDIVVVHSSDLHIDHDYTARLHGGDGTAGLSGVLSAARA
Ga0137374_102766981	3300012204	Vadose Zone Soil	MLQARDIVVVHSSDLHMDHYYTARLHGGDGAAGLVSVLTAAR
Ga0137380_111306391	3300012206	Vadose Zone Soil	MRPGEHLPTPDIVVVHSSDLHMDDDYTARLYGGDGTAGLAGVL
Ga0150985_1070946372	3300012212	Avena Fatua Rhizosphere	MVHSSDLHVDHDYTARLHGGDGTAGLACVLTKARAVG
Ga0150985_1206456231	3300012212	Avena Fatua Rhizosphere	MAFPTPSKDVVVVHSSDVHVDTDYNARLHGGDGTTGLACVLAAARDASADV
Ga0137366_112557281	3300012354	Vadose Zone Soil	MRPGEHLPTPDIVVVHSSDLHMDDDYTARLHGGDGTA
Ga0137361_111809662	3300012362	Vadose Zone Soil	MTSKDVIVVHSSDLHVDHDYTARLHGGDGTAGLACVLH
Ga0137390_104643271	3300012363	Vadose Zone Soil	MTLNNLPSIRDPVVVHSSDLHVDDDHTARLHGGDGTAGLACVLRAAC
Ga0137397_109839222	3300012685	Vadose Zone Soil	MPDAVPAPTRDIVVVHSSDLHLDHDYTARLHGGDGTAGLAGVLAAAR
Ga0157290_101366791	3300012909	Soil	MPHAVPPPARDIVVVHSSDLHLDHDYTARLHGGDGTAGLAGVL
Ga0137404_119477202	3300012929	Vadose Zone Soil	MTPNNLPPARDLIVAHSSDLHVDHDHTARLHGGDGTAGLACVLRAA
Ga0137410_119068031	3300012944	Vadose Zone Soil	MDMFGAMPQGTHPPTRDIVVVHSSDVHVDHEYTARLHGGDGTAG
Ga0164303_108551902	3300012957	Soil	MPYAVPPPARDIVVVHSSDLHLDHDYTARLHGGDGTAGL
Ga0164299_100989131	3300012958	Soil	MPDAVPTPTRDIVVVHSSDLHLDHDYTARLHGGDGTAGLAGVLAAARHAGAD
Ga0182024_102314566	3300014501	Permafrost	MSNPPSRDIIVVHSSDLHVDHDYTARLHGGDGTAGLACVLGAARDNA
Ga0182024_109792943	3300014501	Permafrost	MPSPTPALSPPADIIVVHSSDLHVDHDYTARLHGGDGT
Ga0182024_126728741	3300014501	Permafrost	MQHPPARDIVVVHSSDLHVDHDYTARLHGGDGTAGLGCVLDAARDLSA
Ga0182024_128019351	3300014501	Permafrost	MHPPARDIVVVHSSDLHVDHDYTARLHGGDGTAGLGCVL
Ga0181522_102075333	3300014657	Bog	MSPALLPVRDIVVIHSSDLHVDHDYTARLHGGDGAAGLACVLGAARGTDAD
Ga0137412_111532681	3300015242	Vadose Zone Soil	MDMFGAMPQGTHPPTRDIVVVHSSDVHVDHEYTARLHGGDGRGDPKP
Ga0132258_105885141	3300015371	Arabidopsis Rhizosphere	MPNAVPAPTREVVVVHSSDLPRDHDCTARLHGGDGTAGLVG
Ga0132255_1047651491	3300015374	Arabidopsis Rhizosphere	MPPPTRDLVVVHSSDLHIDHDYTARLHGGDGTAGLAGV
Ga0182041_103873201	3300016294	Soil	MPSLIAARREIVVVHSSDLHMDDDYTARLHGGDGTAGLAGVL
Ga0182033_104725253	3300016319	Soil	MPPAAPSRDIVVVHSSDLHIDHDYTARLHGGDGTAGLSGV
Ga0182033_118772602	3300016319	Soil	MSQAPIPPARDIVVVHSSDLHLDHDYTARLHGGDGTAGL
Ga0187783_104453921	3300017970	Tropical Peatland	MSSFPPPDRDIVVVHSSDLHVDDDYTARLHGGDGVA
Ga0187890_1000250016	3300018044	Peatland	MPQPPSRDVVVVHSSDLHVDHDYTARLHGGDGTAGLGCVLEAARDLAA
Ga0184620_101313671	3300018051	Groundwater Sediment	MPDAVPAPTRDVVVVHSSDLHLDHDYTARLHGGDGAAGLVGVLA
Ga0187784_101078071	3300018062	Tropical Peatland	MPNLPRRDIIVVHSSDLHVDHDYTARLHGGDGTTGLACVLAAAQKL
Ga0066662_114843571	3300018468	Grasslands Soil	MPLQVCSPIDRDIVVVHSSDLHVDHDYTARIHGGDGTAG
Ga0190274_134774491	3300018476	Soil	MPDAVPAPTRDIVVVHSSDLHLDHDYTARLHGGDGTAGLVGVLAAA
Ga0193696_11274582	3300020016	Soil	MPDAVPAPTRDIVVVHSSDLHLDHDYTARLHGGDGTAGLAG
Ga0210399_108997011	3300020581	Soil	MPLPPARDVVVVHSSDLHVDHDYTARLHGGDGTAGLG
Ga0210401_109336382	3300020583	Soil	MPHPHPPSRDIVVVHSSDLHVDHDYTARLHGGDGTAGLNCVLEAARGLAAD
Ga0210381_100375751	3300021078	Groundwater Sediment	MNTKDVIMVHSSDLHVDHDYTARLHGGDGTAGLACVLHAARAIS
Ga0213874_101402411	3300021377	Plant Roots	MIVNPLPSGPDVVVAHSSDLHIDDDHTARLHGGDGA
Ga0213876_106392232	3300021384	Plant Roots	MPFDAQSPTRDIVIVHASDLHVDDDRIAAKHDGDGTAGLHA
Ga0210385_114355782	3300021402	Soil	MTLKNLPPTRDLIVAHSSDLHVDHDHTARLHGGDGTAGLACVLRAAR
Ga0210390_103086741	3300021474	Soil	MPHPPTRDIVVVHSSDLHVDHDYTARLHGGDGTLGLGCVL
Ga0224572_10577662	3300024225	Rhizosphere	MPHPHPPSRDIVVVHSSDLHVDHDYTARLHGGDGTAGLNCVLEAARDLAAD
Ga0209341_104043031	3300025325	Soil	MTAPRDLVLVHSSDLHVDDGFTARTHGGDGTRGLRAVLATA
Ga0210120_11052601	3300025556	Natural And Restored Wetlands	MSAKDIVIVHSSDLHVDHDYTARMHGGDGTAGLASILTLARSA
Ga0207930_11319432	3300025604	Arctic Peat Soil	MPLPPPRDIVVVHSSDLHVDHDYTARLHGGDGTAGLGCVLAAARD
Ga0207710_106964151	3300025900	Switchgrass Rhizosphere	MPDAVSPPTRDVVVIHSSDLHLDHDYTARLHGGDGTAGLVAVLAAAR
Ga0207664_113564161	3300025929	Agricultural Soil	MPASVSPPRRDLTIVHSSDLHLDHDYTARLHGGDGTAGLAGVLK
Ga0207648_110440353	3300026089	Miscanthus Rhizosphere	MSSKDVIMVHTSDLHVDHDYTAKLHGGDGTAGLACVLNAAR
Ga0179587_102950123	3300026557	Vadose Zone Soil	MPHAPPPPTRDIVVVHSSDLHLDHDYTARLHGGDGTAG
Ga0209106_10799581	3300027616	Forest Soil	MTPNNLPPARDLIVAHSSDLHVDHDHTARLHGGDGTAG
Ga0208990_10045671	3300027663	Forest Soil	MPDAVPAPTRDIVVVHSSDLHLDHDYTARLHGGDGTAGLAGVL
Ga0207862_12033751	3300027703	Tropical Forest Soil	MSRDKDVVLIHSSDLHLEHDYAARLHGGDGTAVLSAVLGAAR
Ga0209853_11549992	3300027961	Groundwater Sand	MSRDVVIVHSSDLHVDHDYTARIHGGDGTAGLACVLAAAKSVGA
Ga0268265_119875641	3300028380	Switchgrass Rhizosphere	MPDAVSPPTRDVVVVHSSDLHLDHDYTARLHGGDGT
Ga0137415_100278931	3300028536	Vadose Zone Soil	MPHALPPPTRDIVVVHSSDLHLDHDYAARLHGGDGTAGLAG
Ga0307279_101188822	3300028709	Soil	MPDAVPAPTRDIVVVHSSDLHLDHDYTARLHGGDGTAGLAGV
Ga0307280_100283514	3300028768	Soil	MPDAVPTPTRDIVVVHSSDLHLDHDYTARLHGGDGTAGLAGVLAAARHA
Ga0307320_100557541	3300028771	Soil	MPDAVPTPTRDIVVVHSSDLHLDHDYTARLHGGDGTAG
Ga0307288_100585764	3300028778	Soil	MPDAVPTPTRDIVVVHSSDLHLDHDYTARLHGGDGTAGLAGVLAAARHAGA
Ga0307292_102425082	3300028811	Soil	MSDAVPTPTRDIVVVHSSDLHLDHDYTARLHGGDGTAGLAGVLAAAR
Ga0307314_100215313	3300028872	Soil	MPDAVPAPTRDIVVVHSSDLHLDHDYTARLHGGDGTAG
Ga0307286_100419283	3300028876	Soil	MPDAVPAPTRDIVVVHSSDLHLDHDYTARLHGGDGTAGLVGVL
Ga0308309_105120151	3300028906	Soil	MPHPPARDIVVVHSSDLHVDHDYTARLHGGDGTAGLHC
Ga0308309_112447422	3300028906	Soil	MLHPPARDIVVVHSSDLHVDHDYTARLHGGDGTAGLG
Ga0302179_100999711	3300030058	Palsa	MPNLPARDIIVVHSSDLHVDHDYTARLHGGDGTTG
Ga0308201_102441952	3300031091	Soil	MPDAVPAPTRDIVVVHSSDLHLDHDYTARLHGGDGTAGLAGVLTAARH
Ga0308201_103028961	3300031091	Soil	MPDAVPAPTRDIVVVHSSDLHLDHDYTARLHGGDGTAGLVGVLAAAR
Ga0307498_100225751	3300031170	Soil	MSQASPPPARDIVVVHSSDLHLDHDYTARLHGGDGTAGLAGVLRAAR
Ga0318573_102681851	3300031564	Soil	MQAAGAPTKDIVVVHSSDLHMDDDYTARLHGGDGTAGLSGVLS
Ga0310686_1114445065	3300031708	Soil	MPHPPSRDIVVVHSSDLHVDHDYTARLHGGDGTAGLNCVLEAAR
Ga0318501_108436642	3300031736	Soil	MQAAGAPTKDIVVVHSSDLHMDDDYTARLHGGDGTAGLSGVLSAARA
Ga0307468_1023508132	3300031740	Hardwood Forest Soil	MTAGRDIVVVHSSDLHVDHDYTARMHGGDGTAGLAAVLDAARD
Ga0318537_103634711	3300031763	Soil	MPSLIAARREIVVVHSSDLHMDDDYTARLHGGDGTAGLAGVLSVASS
Ga0318554_103193401	3300031765	Soil	MQAAGAPTKDIVVVHSSDLHMDDDYTARLHGGDGTAGLSGVLSAAAEMTAAARSSRSI
Ga0318498_100734221	3300031778	Soil	MPHAAPARDIVVVHSSDLHIDHDYTARLHGGDGTAGLSGVLSAAR
Ga0318566_104596181	3300031779	Soil	MPQASARDIVVVHSSDLHVDHDYTARLHGGDGAAGLGC
Ga0318552_107290072	3300031782	Soil	MTLNELPPGRDVVVAHSSDLHMDDDHTARLHGGDGTAGLACVLRAASGAGADVVI
Ga0318529_105692081	3300031792	Soil	MTLNELPPGRDVVVAHSSDLHMDDDHTARLHGGDGTAGLACVLRAASGAGADVV
Ga0318576_102929771	3300031796	Soil	MQAAGAPTKDIVVVHSSDLHMDDDYTARLHGGDGTAGLSGVLSAARAG
Ga0318564_101570251	3300031831	Soil	MPHAGAATKDIVVVHSSDLHIDDDYTARLHGGDGTPE
Ga0318551_105302431	3300031896	Soil	MQAAGAPTKDIVVVHSSDLHMDDDYTARLHGGDGTAGEPGG
Ga0306923_108153651	3300031910	Soil	MTLNELPPGRDVVVAHSSDLHMDDDHTARLHGGDGTAGLACVLGAASGA
Ga0306921_103631151	3300031912	Soil	MPHAAPSRDIVIVHSSDLHIDHDYTARLHGGDGTAGLSGVLSAARAAR
Ga0310916_104219801	3300031942	Soil	MPHAGAPTKDIVVVHSSDLHIDDDYTARLHGGDGTAGLSGVLSA
Ga0310913_108597301	3300031945	Soil	MPHAGAPTKDIVVVHSSDLHIDDDYTARLHGGDGTAGLSGV
Ga0306926_103534721	3300031954	Soil	MTLNDLPAGRDVVVAHSSDLHMDDDHTARLHGGDGTAG
Ga0318507_101122881	3300032025	Soil	MPHAGAATKDIVVVHSSDLHIDDDYTARLHGGDGTAGLSGVLSA
Ga0318507_102688671	3300032025	Soil	MPHAGAPTKDIVVVHSSDLHIDDDYTARLHGGDGTAG
Ga0318558_105798321	3300032044	Soil	MPHAAPSRDIVIVHSSDLHIDHDYTARLHGGDGTAGLCGVLS
Ga0318513_104762571	3300032065	Soil	MPNAGAATKDIVVVHSSDLHIDDDYTARLHGGDGTAGLS
Ga0318513_105656862	3300032065	Soil	MPHAGAPTKDIVVVHSSDLHIDDDYTARLHGGDGTAGLSGVLSAAAEMTA
Ga0315336_10841063	3300032132	Seawater	VSSETSDRDAIEIVHSSDLHVDDGYTARAFGGDGTRGLGIVLEA
Ga0335079_105186361	3300032783	Soil	MLQAPARDVIVVHSSDLHVDHDYTARLHGGDGAAGLACVLEAARA
Ga0335079_118581612	3300032783	Soil	MLHPPARDIVVVHSSDLHVDHDYTARLHGGDGAAGLACVL
Ga0310914_103881383	3300033289	Soil	MPHAAPSRDIVVVHSSDLHIDHDYTARLHGGDGTAGLSGVLSAARAAG

Hidden Markov Model


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