Metagenome / Metatranscriptome Family F060883

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F060883
Family Type	Metagenome / Metatranscriptome
Number of Sequences	132
Average Sequence Length	54 residues
Representative Sequence	LDDIRRVQDHIVRRAKRHNVPVIANNDIRAAIDSVLELVLASAEQVQRV
Number of Associated Samples	112
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	98.48 %
% of genes from short scaffolds (< 2000 bps)	90.15 %
Associated GOLD sequencing projects	107
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (31.818 % of family members)
Environment Ontology (ENVO)	Unclassified (34.091 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.030 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.95% β-sheet: 0.00% Coil/Unstructured: 48.05%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF03320	FBPase_glpX	89.39
PF01883	FeS_assembly_P	6.06
PF13484	Fer4_16	1.52
PF01202	SKI	0.76
PF13492	GAF_3	0.76
PF00107	ADH_zinc_N	0.76
PF06253	MTTB	0.76

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG1494	Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase or related protein	Carbohydrate transport and metabolism [G]	89.39
COG5598	Trimethylamine:corrinoid methyltransferase	Coenzyme transport and metabolism [H]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	87.12 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	75.00 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	10.61 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	74.24 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	10.61 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	74.24 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	10.61 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	74.24 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	10.61 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_110541270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	684	Open in IMG/M
3300001333\|A21PFW6_1171525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	790	Open in IMG/M
3300005165\|Ga0066869_10081088	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	622	Open in IMG/M
3300005172\|Ga0066683_10512043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	733	Open in IMG/M
3300005175\|Ga0066673_10877077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	511	Open in IMG/M
3300005177\|Ga0066690_10380434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	958	Open in IMG/M
3300005334\|Ga0068869_100613392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	920	Open in IMG/M
3300005436\|Ga0070713_100510901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1135	Open in IMG/M
3300005439\|Ga0070711_100124035	All Organisms → cellular organisms → Bacteria	1915	Open in IMG/M
3300005439\|Ga0070711_100549580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	958	Open in IMG/M
3300005440\|Ga0070705_100025375	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3213	Open in IMG/M
3300005466\|Ga0070685_11272280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	561	Open in IMG/M
3300005467\|Ga0070706_101109603	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	728	Open in IMG/M
3300005471\|Ga0070698_101871078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	553	Open in IMG/M
3300005530\|Ga0070679_101159009	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	718	Open in IMG/M
3300005540\|Ga0066697_10675198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	567	Open in IMG/M
3300005554\|Ga0066661_10934087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	507	Open in IMG/M
3300005557\|Ga0066704_10841154	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300005557\|Ga0066704_10949236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	531	Open in IMG/M
3300005558\|Ga0066698_10697640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	670	Open in IMG/M
3300005559\|Ga0066700_10231300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1287	Open in IMG/M
3300005564\|Ga0070664_101214855	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	711	Open in IMG/M
3300005574\|Ga0066694_10589450	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300005576\|Ga0066708_10726174	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300005614\|Ga0068856_102380872	All Organisms → cellular organisms → Bacteria → Terrabacteria group	537	Open in IMG/M
3300005615\|Ga0070702_100270754	All Organisms → cellular organisms → Bacteria	1161	Open in IMG/M
3300005615\|Ga0070702_101759950	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	517	Open in IMG/M
3300006046\|Ga0066652_100595599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1042	Open in IMG/M
3300006578\|Ga0074059_12160090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	993	Open in IMG/M
3300006796\|Ga0066665_10687473	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300006800\|Ga0066660_10955142	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	693	Open in IMG/M
3300006914\|Ga0075436_100567792	All Organisms → cellular organisms → Bacteria	834	Open in IMG/M
3300009012\|Ga0066710_101603513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	997	Open in IMG/M
3300009012\|Ga0066710_103197349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	629	Open in IMG/M
3300009101\|Ga0105247_10048218	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2616	Open in IMG/M
3300009137\|Ga0066709_101451981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	993	Open in IMG/M
3300009137\|Ga0066709_103100590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	608	Open in IMG/M
3300009137\|Ga0066709_103767803	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	550	Open in IMG/M
3300009177\|Ga0105248_12370471	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	604	Open in IMG/M
3300009551\|Ga0105238_12990534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	508	Open in IMG/M
3300009801\|Ga0105056_1011863	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	989	Open in IMG/M
3300010037\|Ga0126304_10906574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	599	Open in IMG/M
3300010037\|Ga0126304_11140237	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	534	Open in IMG/M
3300010039\|Ga0126309_11198431	All Organisms → cellular organisms → Bacteria → Terrabacteria group	521	Open in IMG/M
3300010337\|Ga0134062_10321553	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	738	Open in IMG/M
3300010337\|Ga0134062_10426164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	654	Open in IMG/M
3300010371\|Ga0134125_12414780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	572	Open in IMG/M
3300011269\|Ga0137392_10517744	All Organisms → cellular organisms → Bacteria	991	Open in IMG/M
3300011271\|Ga0137393_11031573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	700	Open in IMG/M
3300012202\|Ga0137363_11115198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	671	Open in IMG/M
3300012350\|Ga0137372_10009630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9294	Open in IMG/M
3300012353\|Ga0137367_10734783	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	687	Open in IMG/M
3300012357\|Ga0137384_11234339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	593	Open in IMG/M
3300012360\|Ga0137375_10050234	All Organisms → cellular organisms → Bacteria	4559	Open in IMG/M
3300012360\|Ga0137375_10086052	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3259	Open in IMG/M
3300012360\|Ga0137375_11288812	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	552	Open in IMG/M
3300012469\|Ga0150984_109676360	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	550	Open in IMG/M
3300012532\|Ga0137373_11290221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	509	Open in IMG/M
3300012913\|Ga0157298_10058069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	918	Open in IMG/M
3300012941\|Ga0162652_100034011	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	777	Open in IMG/M
3300012960\|Ga0164301_10100547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1659	Open in IMG/M
3300012972\|Ga0134077_10374008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	611	Open in IMG/M
3300012984\|Ga0164309_10178598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1440	Open in IMG/M
3300012985\|Ga0164308_10293609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1287	Open in IMG/M
3300013308\|Ga0157375_10061318	All Organisms → cellular organisms → Bacteria	3734	Open in IMG/M
3300014166\|Ga0134079_10356495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	667	Open in IMG/M
3300014823\|Ga0120170_1062717	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300015373\|Ga0132257_100691950	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1266	Open in IMG/M
3300018027\|Ga0184605_10043156	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1900	Open in IMG/M
3300018027\|Ga0184605_10249295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	807	Open in IMG/M
3300018054\|Ga0184621_10052329	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1367	Open in IMG/M
3300018056\|Ga0184623_10526213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	501	Open in IMG/M
3300018061\|Ga0184619_10017329	All Organisms → cellular organisms → Bacteria	2924	Open in IMG/M
3300019361\|Ga0173482_10709392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	521	Open in IMG/M
3300019362\|Ga0173479_10393106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	666	Open in IMG/M
3300020006\|Ga0193735_1101012	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	804	Open in IMG/M
3300020015\|Ga0193734_1038827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	889	Open in IMG/M
3300020015\|Ga0193734_1064648	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	653	Open in IMG/M
3300020022\|Ga0193733_1016662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2075	Open in IMG/M
3300020059\|Ga0193745_1108172	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	587	Open in IMG/M
3300021073\|Ga0210378_10198396	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	767	Open in IMG/M
3300021078\|Ga0210381_10405024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	505	Open in IMG/M
3300021344\|Ga0193719_10318641	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	650	Open in IMG/M
3300021510\|Ga0222621_1045835	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	913	Open in IMG/M
3300025900\|Ga0207710_10026206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2518	Open in IMG/M
3300025907\|Ga0207645_10720334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	678	Open in IMG/M
3300025916\|Ga0207663_10442563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1001	Open in IMG/M
3300025935\|Ga0207709_11622744	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	537	Open in IMG/M
3300025939\|Ga0207665_10343058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1126	Open in IMG/M
3300025981\|Ga0207640_10203888	All Organisms → cellular organisms → Bacteria	1501	Open in IMG/M
3300025986\|Ga0207658_10103253	All Organisms → cellular organisms → Bacteria	2238	Open in IMG/M
3300026088\|Ga0207641_10922584	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	868	Open in IMG/M
3300026121\|Ga0207683_11727698	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	575	Open in IMG/M
3300026309\|Ga0209055_1295799	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	509	Open in IMG/M
3300026310\|Ga0209239_1211620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	687	Open in IMG/M
3300026310\|Ga0209239_1322104	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	537	Open in IMG/M
3300026532\|Ga0209160_1223994	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	658	Open in IMG/M
3300027006\|Ga0209896_1010987	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	977	Open in IMG/M
3300027379\|Ga0209842_1097187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	500	Open in IMG/M
3300028716\|Ga0307311_10264087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	513	Open in IMG/M
3300028717\|Ga0307298_10005870	All Organisms → cellular organisms → Bacteria	2969	Open in IMG/M
3300028721\|Ga0307315_10130775	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	754	Open in IMG/M
3300028721\|Ga0307315_10132506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	749	Open in IMG/M
3300028722\|Ga0307319_10272779	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	558	Open in IMG/M
3300028755\|Ga0307316_10133890	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	878	Open in IMG/M
3300028771\|Ga0307320_10058168	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1434	Open in IMG/M
3300028784\|Ga0307282_10393994	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	670	Open in IMG/M
3300028787\|Ga0307323_10172916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	780	Open in IMG/M
3300028791\|Ga0307290_10188885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	755	Open in IMG/M
3300028799\|Ga0307284_10470711	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	515	Open in IMG/M
3300028803\|Ga0307281_10061194	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1203	Open in IMG/M
3300028807\|Ga0307305_10021443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2909	Open in IMG/M
3300028807\|Ga0307305_10087805	All Organisms → cellular organisms → Bacteria	1437	Open in IMG/M
3300028819\|Ga0307296_10132127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1345	Open in IMG/M
3300028819\|Ga0307296_10735817	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	538	Open in IMG/M
3300028824\|Ga0307310_10151564	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1070	Open in IMG/M
3300028824\|Ga0307310_10415372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	669	Open in IMG/M
3300028828\|Ga0307312_10059248	All Organisms → cellular organisms → Bacteria	2304	Open in IMG/M
3300028828\|Ga0307312_10514270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	790	Open in IMG/M
3300028872\|Ga0307314_10165450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	647	Open in IMG/M
3300028875\|Ga0307289_10146228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	971	Open in IMG/M
3300028876\|Ga0307286_10208217	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	711	Open in IMG/M
3300028878\|Ga0307278_10060719	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1707	Open in IMG/M
3300028878\|Ga0307278_10363433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	638	Open in IMG/M
3300028881\|Ga0307277_10422860	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	596	Open in IMG/M
3300028884\|Ga0307308_10576506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	539	Open in IMG/M
3300028885\|Ga0307304_10436967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	594	Open in IMG/M
3300030511\|Ga0268241_10054824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	862	Open in IMG/M
3300031058\|Ga0308189_10204059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	718	Open in IMG/M
3300031200\|Ga0307496_10045038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	731	Open in IMG/M
3300032180\|Ga0307471_100919109	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1042	Open in IMG/M
3300032180\|Ga0307471_100920010	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1042	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.12%
Host-Associated	Host-Associated	12.88%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.06%
Plants	Host-Associated → Plants	12.88%
Aquatic	Environmental → Aquatic	6.06%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.30%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.33%
Sediment	Environmental → Aquatic → Sediment	4.55%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.55%
Freshwater	Environmental → Aquatic → Freshwater	1.52%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.18%
Loam	Environmental → Terrestrial → Soil → Loam	9.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.30%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.55%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.03%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.03%
Sand	Environmental → Terrestrial → Soil → Sand	2.27%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.52%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.76%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	47.73%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	17.42%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.30%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.03%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	2.27%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.52%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.52%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.52%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.76%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	31.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	12.12%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.58%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.58%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.30%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.79%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.27%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.27%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	2.27%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.27%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.52%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.52%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.52%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.52%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.76%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.76%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.76%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.76%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.76%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.76%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.76%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001333	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A21-PF)- 6 month illumina	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006578	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009801	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012941	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t4i015	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014823	Permafrost microbial communities from Nunavut, Canada - A3_80cm_0M	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300020015	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m1	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300020059	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a2	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021510	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300027006	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027379	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20 (SPAdes)	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028872	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300030511	Bulk soil microbial communities from Mexico - Amatitan (Am) metaG (v2)	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031200	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 9_S	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1105412701	3300000956	Soil	DDIRRIQDHIVRRAKRHRVPVIGNTDLRAASDAVLELVLSSSEQVQRV*
A21PFW6_11715252	3300001333	Permafrost	KRHNVPVIANNDIREAIDSVLELVLASAEQVQRV*
Ga0066869_100810881	3300005165	Soil	HAKYIERLDDIRRVQDHIIGRAKRHNVPVIANNDIRGAIDSVLELVLSSAEQVQRV*
Ga0066683_105120431	3300005172	Soil	PHAKYIDRLDDIRRIQDLIVRRARRHGVPVIDRADMREAIDGVLELVLSHTEQVQPV*
Ga0066673_108770772	3300005175	Soil	RRVQDYIVARARRHGVPVIANPDMRSAIDAVLELVLASAEQVQRV*
Ga0066690_103804342	3300005177	Soil	LGDIRRIQEHIVRRAKRHGVPVVPNADIRTAIDAVLELVLASAEQIERV*
Ga0068869_1006133921	3300005334	Miscanthus Rhizosphere	RLDDIRRVQDHIVRRAKRHNVPVIANNDIRQAIDSVLELVLASAEQVQRV*
Ga0070713_1005109012	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MVRDAGLDGLRPHQKYIDRLDDIRHVQEHIVQRARRHGVPVIANTDMREALDEVLGLVLASAEQVQRV*
Ga0070711_1001240354	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	HDKYIERLDDIRRIQDHIVRRAERTGVPVLRNHAVEATIGSVLELVYASAEQVQRVV*
Ga0070711_1005495802	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	PHQKYIDRLDDIRRVQDQIVRRARRHRVPVITHTDMRSALDALLELVLASAEQVQRV*
Ga0070705_1000253754	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	IERLDDIRRVQDHIIGRAKRHKVPVIANNDIRGAIDSVLELVLSSAEQVQRV*
Ga0070685_112722801	3300005466	Switchgrass Rhizosphere	RRVQDHIVRRAKRHNVPVIANNDIRQAIDSVLELVLASAEQVQRV*
Ga0070706_1011096032	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	QDHIVGRARRQRVPVITNTDMRSATDAVLELVLASAEQIQRV*
Ga0070698_1018710781	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	QDHIVRRAKRHNVPVIANTDIRAQIDAVLELVLASAEQVQRV*
Ga0070679_1011590092	3300005530	Corn Rhizosphere	RLDDIRRIQDHIVRRARRHRVPVIANTDMRDATDAVLELVLARAEQVQRV*
Ga0066697_106751982	3300005540	Soil	RLDDIRRVQDHIVRRAKRHNVPVIANTDIRAQIDAVLELVLASAEQVQRV*
Ga0066661_109340872	3300005554	Soil	TKYLDRLDDIRRVQDHIVRRAKRHHVPVIANADLRTSIDAVLELVLASAEQVQRV*
Ga0066704_108411541	3300005557	Soil	TTEGARHHDKYIEALGDIRRIQEHIVRRAERAGVPVLGNRGSIEATIGSVLELVFAGAEQVQRV*
Ga0066704_109492362	3300005557	Soil	PHEKYLDRLDDIRRIQEHIVKRARRHRVPVISNADLRVAIDQVLELVLASVEQVERV*
Ga0066698_106976401	3300005558	Soil	IQAHIVRRARRHAVPVIAHTDLRAAIDGVLELVLASVEQVQRV*
Ga0066700_102313001	3300005559	Soil	KYIDRLDDIRRIQEHIVKRAKRHQVPVVPNSDIRVAIDSVLELVLASVEQVQTV*
Ga0070664_1012148551	3300005564	Corn Rhizosphere	QDHIVRRAKRHNVPVIANNDIRQAIDSVLELVLASAEQVQRV*
Ga0066694_105894502	3300005574	Soil	RPHLKYIDRLDDIRRVQDHIVRRAKRHHVPVITSTDLRTQIEAVLELVLASAEQVQRV*
Ga0066708_107261742	3300005576	Soil	GLDGLRPHMKYLDRLDDIRRVQDHIVRRAKRHHVPVIANTDLRTSIDAVLELVLASAEQVQRV*
Ga0068856_1023808722	3300005614	Corn Rhizosphere	TEGVRHHDKYIERLDDIRRIQDHIVRRAERTGVPVLRNHAVEATIGSVLELVYASAEQVQRVV*
Ga0070702_1002707541	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	RPHSKYLDRLDDIRRVQDHIVRRAKRHNVPVIANNDIRQAIDSVLELVLASAEQVQRV*
Ga0070702_1017599502	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	DIRRVQDYLIGRAKRHKVPVIANNDIRGAIDSVLELVLASAEQVQRV*
Ga0066652_1005955991	3300006046	Soil	TKYIDRLDDIRRVQDHIVRRAKRHNVPVIANNDIRAAIDSVLELVLASAEQVQRV*
Ga0074059_121600902	3300006578	Soil	ERLDDIRRVQDHIIGRAKRHKVPVIANNDIRGAIDSVLELVLSSAEQVQRV*
Ga0066665_106874732	3300006796	Soil	RPHLKYLDRLDDIRRIQDHILRRAKRHRVPVIANTDLRAASDAVLELVLAGSEQVQRV*
Ga0066660_109551421	3300006800	Soil	DHIVRRAKRHHVPVIANADMRTSIDAVLQLVLASVEQVQTV*
Ga0075436_1005677922	3300006914	Populus Rhizosphere	LDDIRLIQDLIVRRARRHGVPVIDRPDMREAIDGVLELVLSHTEQVQPV*
Ga0066710_1016035131	3300009012	Grasslands Soil	HAKYIERLDDIRRIQDHIVRRARRNYVPVIAHTDLRKAIDSVLELVLASAEQVQRV
Ga0066710_1031973492	3300009012	Grasslands Soil	RVQDHIVRRAKRHHVPVITSTDLRTQIEAVLELVLASAEQVQRV
Ga0105247_100482184	3300009101	Switchgrass Rhizosphere	ERLDDIRRVQDYLIGRAKRHKVPVIANNDIRGAIDSVLELVLASAEQVQRV*
Ga0066709_1014519812	3300009137	Grasslands Soil	HLKYIDRLDDIRRVQDHIVRRAKRHQVPVITSTDLRTQIDAVLELVLASAEQVQRV*
Ga0066709_1031005901	3300009137	Grasslands Soil	RLDDIRHVQEHIVQRAHRHGVPVIANTDMREAIDEVLGLVLATAEQVQRV*
Ga0066709_1037678032	3300009137	Grasslands Soil	DDIRRIQDHIVDRAKRHRVPVIGNTDLRAASDAVLELVLSSSEQVQRV*
Ga0105248_123704711	3300009177	Switchgrass Rhizosphere	QKYIDRLDDIRRVQDQIVRRARRHRVPVITHTDMRSALDALLELVLASAEQVQRV*
Ga0105238_129905341	3300009551	Corn Rhizosphere	RDIGSDGLRPHSKYIDRLDDIRRIQDYIVRRARRHGVPVIGNTDIRSAIDRVVELVLASAEQMQHV*
Ga0105056_10118631	3300009801	Groundwater Sand	HSTHFLVRDAGLDGSRPHMKYIERLDDIRRIQDHIVRRARRHQVPVIVHTDMRRAIDAVLELVLASAEQVQRV*
Ga0126304_109065741	3300010037	Serpentine Soil	RLDDIRNIQDYIVRRARRHKVPVIGNTDIRSAIDRVVELVLTSAEQVQHV*
Ga0126304_111402371	3300010037	Serpentine Soil	LMRDAGLDGSRPHAKYIERLDDIRRIQDHIVRRARRHRVPVILHTDMRRAIDAVLELVLASAEQVQRV*
Ga0126309_111984312	3300010039	Serpentine Soil	TTDGVRHHDKYIQALDDIRRIQDHIVRRAARTGVPVLHNRGSIESTIGSLLELVYAGAEQVQRV*
Ga0134062_103215531	3300010337	Grasslands Soil	RLNDIRRIQEYIVRRARRHRVPVITNTDMRDAIDAVLELVLASAEQVERV*
Ga0134062_104261641	3300010337	Grasslands Soil	LDDIRRVQDHIVRRAKRHNVPVIANNDIRAAIDSVLELVLASAEQVQRV*
Ga0134125_124147801	3300010371	Terrestrial Soil	RRARRHRVPVITHTDMRSALDALLELVLASAEQVQRV*
Ga0137392_105177442	3300011269	Vadose Zone Soil	LKYIDRLDDIRRVQDHIVRRAKRHNVPVIANTDIREQIDAVLELVLASSEQVQRV*
Ga0137393_110315731	3300011271	Vadose Zone Soil	DHIVRRAKRHHVPVITSTDLRTQIDAVLELVLASAEQVQRV*
Ga0137363_111151982	3300012202	Vadose Zone Soil	RPHLKYIDRLDDIRRVQDHIVKRATRHHVPVITSTDLRTQIDAVLELVLASAEQVQRV*
Ga0137372_100096309	3300012350	Vadose Zone Soil	SRRHGVPVIANADLRSAIGSVLELVLASAEQVQRV*
Ga0137367_107347831	3300012353	Vadose Zone Soil	DDIRRVQDHIVRRARRHRVPVIANTDMRSAIDAVLELVLASAEQVQRV*
Ga0137384_112343391	3300012357	Vadose Zone Soil	IVGRARRHGVPVISNIDMRSAIDSVLELVLASAEQVQRV*
Ga0137375_100502347	3300012360	Vadose Zone Soil	DIRRVQDHIVRRARRHRVPVIANTDMRSAIDAVLELVLASAEQVQRV*
Ga0137375_100860521	3300012360	Vadose Zone Soil	RRHRVPVIANADIRTAIAAVMELVLASAEQVQRV*
Ga0137375_112888122	3300012360	Vadose Zone Soil	HIVRGARRHRVTVITNTDMREAIDAVLELVLASAEQVQRV*
Ga0150984_1096763601	3300012469	Avena Fatua Rhizosphere	LDRLDDIRHVQEHIVQRAHRHGVPVIANTDMREAIDEVLGLVLATAEQVQRV*
Ga0137373_112902211	3300012532	Vadose Zone Soil	HFMIRDAGLDGLRPHAKYIDRLDDIRRIQAHIVRRARRHRVPVIANTDLRAAIDGVLELVLASVEQVQRV*
Ga0157298_100580691	3300012913	Soil	IRRIQEHIVRRAKRHNVPVIANNDIRAAIDSVLELVLASAEQVQRV*
Ga0162652_1000340112	3300012941	Soil	DTVGLARRLLEGLRPHAKYIERLDDIRRVQDHIIGRAKRHNVPVIANNDIRGAIDSVLELVLSSAEQVQRV*
Ga0164301_101005474	3300012960	Soil	HLKYIDRLDDIRRVQDHIVGRAKRHNVPVIANTDIREQIDAVLELVLASAEQVQRV*
Ga0134077_103740082	3300012972	Grasslands Soil	LDGLRPHTKYIDRLDDIRRVQDHIVRRAKRHNVPVIANTDIRAQIDSVLELVLASAEQVQRV*
Ga0164309_101785983	3300012984	Soil	ITHFMVRDAGLDGLRPHAKYIERLDDIRRVQEHIIGRAKRHKVPVIANNDIRGAIDSVLELVLSSAEQVQRV*
Ga0164308_102936093	3300012985	Soil	RARRHKVPVIANNDIRGAIDSVLELVLSSAEQVQRV*
Ga0157375_100613185	3300013308	Miscanthus Rhizosphere	GRAKRHKVPVIANNDIRGAIDSVLELVLASAEQVQRV*
Ga0134079_103564951	3300014166	Grasslands Soil	IERLDDIRRVQEHIVRRARRHGVPVITNTDMREAIDAVLELVLANAEQVERV*
Ga0120170_10627172	3300014823	Permafrost	LDDIRRVQDHIVRRAKRHNVPVISNTDIRAQIDAVLELVLASAEQVQRV*
Ga0132257_1006919501	3300015373	Arabidopsis Rhizosphere	GSDGLRPHSKYIDRLDDIRRIQDYIVRRARRHGVPVIGNTDIRSAIDRVVELVLASAEQMQHV*
Ga0184605_100431561	3300018027	Groundwater Sediment	QDHIVERARRHRVPVITNTDMRSATDAVLDLVLASAEQVQRV
Ga0184605_102492951	3300018027	Groundwater Sediment	IGRAKRHNVPVIANNDIRGAIDSVLELVLSSAEQVQRV
Ga0184621_100523291	3300018054	Groundwater Sediment	HSTHFMVRDAGLDGLRPHLKYIDRLDDIRRIQDHIVERAKRHRVPVIANTDIRAQIDAVLELVLASAEQVQRV
Ga0184623_105262131	3300018056	Groundwater Sediment	DHIIGRAKRHNVPVIANNDIRGAIDSVLELVLSSAEQVQRV
Ga0184619_100173295	3300018061	Groundwater Sediment	EEHSTHFMVRDAGLDGLRPHLKYIDRLDDIRRIQDHIVERAKRHRVPVIANTDIRAQIDAVLELVLASAEQVQRV
Ga0173482_107093921	3300019361	Soil	VRRAKRHNVPVIANNDIRAAIDSVLELVLASAEQVQRV
Ga0173479_103931061	3300019362	Soil	IQDYIVRRARRHRVPVIANTDMRDATDAVLELVLARAEQVQRV
Ga0193735_11010122	3300020006	Soil	DGLRPHAKYIERLDDIRRVQDHIIGRAKRHNVPVIANNDIRGAIDSVLELVLSSAEQVQR
Ga0193734_10388272	3300020015	Soil	MVRDAGLDGLRPHMKYIDRLDDIRRIQDHIVRRAKRHNVPVIANNDIRAAIDSVLELVLASAEQVQRV
Ga0193734_10646482	3300020015	Soil	YIERLDDIRRVQDHIIGRAKRHNVPVIANNDIRGAIDSVLELVLSSAEQVQRV
Ga0193733_10166621	3300020022	Soil	HLKYIERLDDIRRIQDHIVRRAKRHNVPVIANTDIRAQIDAVLELVLASAEQVQRV
Ga0193745_11081721	3300020059	Soil	DIRRVQDHIIGRAKRHNVPVIANNDIRGAIDSVLELVLSSAEQVQRV
Ga0210378_101983961	3300021073	Groundwater Sediment	DGLRPHTKYIDRLDDIRRVQDHIVWRAKRHNVPVIANNDIRAAIDSVLELVLASAEQVQR
Ga0210381_104050241	3300021078	Groundwater Sediment	AGLDGLRPHMKYIDRLDDIRRIQEHIVRRAKRHNVPVIANNDIRAAIDSVLELVLASAEQVQRV
Ga0193719_103186412	3300021344	Soil	RPHLKYIERLDDIRRIQDHIVRRAKRHNVPVIANTDIRAQIDAVLELVLASAEQVQRV
Ga0222621_10458352	3300021510	Groundwater Sediment	EEEHSTHFMVRDAGLDGLRPHLKYIDRLDDIRRIQDHIVERAKRHRVPVIANTDIRAQIDAVLELVLASAEQVQRV
Ga0207710_100262061	3300025900	Switchgrass Rhizosphere	ERLDDIRRVQDYLIGRAKRHKVPVIANNDIRGAIDSVLELVLASAEQVQRV
Ga0207645_107203341	3300025907	Miscanthus Rhizosphere	RLDDIRRIQDYIVRRARRHGVPVIGNTDIRSAIDRVVELVLASAEQMQHV
Ga0207663_104425632	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	GVRHHDKYIERLDDIRRIQDHIVRRAERTGVPVLRNHAVEATIGSVLELVYASAEQVQRV
Ga0207709_116227441	3300025935	Miscanthus Rhizosphere	RRVQDHIIGRAKRHKVPVIANNDIRGAIDSVLELVLSSAEQVQRV
Ga0207665_103430583	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	VQEHIVQRARRHGVPVIANADMREALDEVLGLVLASAEQVQRV
Ga0207640_102038883	3300025981	Corn Rhizosphere	IRRVQDYLIGRAKRHKVPVIANNDIRGAIDSVLELVLASAEQVQRV
Ga0207658_101032531	3300025986	Switchgrass Rhizosphere	RLDDIRRVQDYLIGRAKRHKVPVIANNDIRGAIDSVLELVLASAEQVQRV
Ga0207641_109225841	3300026088	Switchgrass Rhizosphere	LRRHSKYLDRLDDIRRVQDHIVRRAKRHNVPVIANNDIRQAIDSVLELVLASAEQVQRV
Ga0207683_117276981	3300026121	Miscanthus Rhizosphere	RRARRHGVPVIGNTDIRSAIDRVVELVLASAEQMQHV
Ga0209055_12957992	3300026309	Soil	PHTKYLDRLDDIRRVQDHIVRRAKRHHVPVIANADLRTSIDAVLELVLASAEQVQRV
Ga0209239_12116201	3300026310	Grasslands Soil	GLRPHLKYLDRLDDIRRIQDHILGRAKRHRVPVIANTDLRAASDAVLELVLAGSEQVQPV
Ga0209239_13221041	3300026310	Grasslands Soil	STHFMVRDAGLAGLRPHAKYIDRLDDIRRVQAHIVRRAHRHRVPVVANTDLRTAIDGVLELVLASVEQVQRV
Ga0209160_12239941	3300026532	Soil	GLRPHTKYLDRLDDIRRVQDHIVRRAKRHHVPVIANADLRTSIDAVLELVLASAEQVQRV
Ga0209896_10109872	3300027006	Groundwater Sand	RPHMKYIERLDDIRRIQDHIVRRARRHQVPVIVHTDMRRAIDAVLELVLASAEQVQRV
Ga0209842_10971871	3300027379	Groundwater Sand	DIRRIQDHIVRRARRHQVPVIVHTDMRRAIDAVLELVLASAEQVQRV
Ga0307311_102640871	3300028716	Soil	EEEHSTHFMVRDAGLDGLRPHMKYIDRLDDIRRIQDHIVRRAKRHNVPVIANNDIRAAIDSVLELVLASAEQVQRV
Ga0307298_100058705	3300028717	Soil	RLDDIRRIQDHIVERAKRHRVPVIANTDIRAQIDAVLELVLASAEQVQRV
Ga0307315_101307751	3300028721	Soil	MKYIDRLDDIRRIQEHIVRRAKRHNVPVIANNDIRAAIDSVRELVLASAEQVQRV
Ga0307315_101325062	3300028721	Soil	PHTKYIDRLDDIRRVQDHIVWRAKRHNVPVIANNDIRAAIDSVLELVLASAEQVQRV
Ga0307319_102727792	3300028722	Soil	THFMVRDAGLDGLRPHMKYIDRLDDIRRIQDHIVRRARRHNVPVIANNDIRAAIDSVLELVLASAEQVQRV
Ga0307316_101338902	3300028755	Soil	AGLDGLRPHMKYIDRLDDIRRIQDHIVRRARRHNVPVIANNDIRAAIDSVLELVLASAEQVQRV
Ga0307320_100581681	3300028771	Soil	EEHSTHFMVRDAGLDGLRPHTKYIDRLDDIRRIQDHIVRRAKRHNVPVIANNDIRAAIDSVLELVLASAEQVQRV
Ga0307282_103939941	3300028784	Soil	THFMVRDAGLDGLRPHLKYIERLDDIRRIQDHIVRRAKRHNVPVIANTDIRAQIDAVLELVLASAEQVQRV
Ga0307323_101729162	3300028787	Soil	DIRRIQEYIVRRAKRHNVPVIANNDIRAAIDSVLELVLASAEQVQRV
Ga0307290_101888851	3300028791	Soil	RIQDHIVRRAKRHNVPVIANTDIRAQIDAVLELVLASAEQVQRV
Ga0307284_104707112	3300028799	Soil	GLDGLRPHMKYIDRLDDIRRIQEHIVRRAKRHNVPVIANNDIRAAIDSLLELVLASAEQVQRV
Ga0307281_100611942	3300028803	Soil	RLDDIRRVQDHIVRRAKRHNVPVIANNDIRAAIDSLLELVLSSAEQVQRV
Ga0307305_100214431	3300028807	Soil	RARRHKVPVIANNDIRGAIDSVLELVLSSAEQVQRV
Ga0307305_100878051	3300028807	Soil	PHMKYIDRLDDIRRIQDHIVRRAKRHNVPVIANNDIRAAIDSVLELVLASAEQVQRV
Ga0307296_101321273	3300028819	Soil	HFMVRDAGLDGLRPHMKYIDRLDDIRRIQDHIVRRAKRHNVPVIANNDIRAAIDSVLELVLASAEQVQRV
Ga0307296_107358172	3300028819	Soil	LFRSIERLDDIRRVQDHIVRRAKRHNVPVITNNDIRGAIDSVLELVLASAEQVQRI
Ga0307310_101515642	3300028824	Soil	GLRPHMKYIDRLDDIRRIQDHIVRRARRHNVPVIANNDIRAAIDSVLELVLASAEQVQRV
Ga0307310_104153722	3300028824	Soil	EHSTHFMVRDAGLDGLRPHLKYIERLDDIRRIQDHIVRRAKRHNVPVIANTDIRAQIDAVLELVLASAEQVQRV
Ga0307312_100592484	3300028828	Soil	VQDHIVWRAKRHNVPVIANNDIRAAIDSVLELVLASAEQVQRV
Ga0307312_105142701	3300028828	Soil	DAGLDGLRPHTKYIDRLDDIRRVQDHIVWRAKRHNVPVIANNDIRAAIDSVLELVLASAEQVQRV
Ga0307314_101654502	3300028872	Soil	QDHIIGRARRHKVPVIANNDIRGAIDSVLELVLSSAEQVQRV
Ga0307289_101462282	3300028875	Soil	DGLRPHMKYIDRLDDIRRIQDHIVRRARRHNVPVIANNDIRAAIDSVLELVLASAEQVQR
Ga0307286_102082172	3300028876	Soil	DHIVRRAKRHNVPVIANNDIRQAIDSVLELVLASAEQVQRV
Ga0307278_100607191	3300028878	Soil	RLDDIRRVQDHIVGRARRHRVPVITNTDMRSATDAVLDLVLAGAEQVQRV
Ga0307278_103634331	3300028878	Soil	LRPHTKYIDRLDDIRRVQDHIVWRAKRHNVPVIANNDIRAAIDSVLELVLASAEQVQRV
Ga0307277_104228602	3300028881	Soil	VQDHIVGRARRHHVPVITNTDMRSATDAVLDLVLASAEQVQRV
Ga0307308_105765061	3300028884	Soil	EHSTHFMVRDAGLDGLRPHTKYIDRLDDIRRIQEHIVRRAKRHNVPVIANNDIRAAIDSVLELVLASAEQVQRV
Ga0307304_104369672	3300028885	Soil	KRHNVPVITNNDIRGAIDSVLELVLASAEQVKTDLNG
Ga0268241_100548241	3300030511	Soil	AKYLERLDDIRRVQDHIVGRARRHHIPVITNTDMRSATDAVLELVLASAEQIQRV
Ga0308189_102040592	3300031058	Soil	PHMKYIDRLDDIRRIQEYIVRRAKRHNVPVIANNDIRAAIDSVLELVLASAEQVQRV
Ga0307496_100450382	3300031200	Soil	IRRVQDYIVRRAKRHNVPVIANTDIRAQIDSVLELVLASAEQVQRV
Ga0307471_1009191092	3300032180	Hardwood Forest Soil	DDIRRVQDHIIGRAKRHKVPVIANNDIRGAIDSVLELVLSSAEQVQRV
Ga0307471_1009200102	3300032180	Hardwood Forest Soil	LDRLDDIRRVQDHIVRRARRHNVPVIANNDIREAIDSVLELVLASAEQVQRV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F060883

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences