Metagenome Family F060699

Basic Information
Family ID	F060699
Family Type	Metagenome
Number of Sequences	132
Average Sequence Length	51 residues
Representative Sequence	MALFGSKKVNATPAFASAPIQAAAGSAAQVGQFYSYSVGASQELALSVPTV
Number of Associated Samples	89
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Viruses
% of genes with valid RBS motifs	89.39 %
% of genes near scaffold ends (potentially truncated)	99.24 %
% of genes from short scaffolds (< 2000 bps)	97.73 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	No

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Duplodnaviria (94.697 % of family members)
NCBI Taxonomy ID	2731341
Taxonomy	All Organisms → Viruses → Duplodnaviria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (25.000 % of family members)
Environment Ontology (ENVO)	Unclassified (65.909 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (56.818 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84 1JGI12421J11937_101534892 2B570J29032_1093676972 3B570J29032_1096045932 4JGI24768J34885_103187742 5Ga0069718_101397121 6Ga0069718_155872432 7Ga0049083_101235912 8Ga0049083_102625552 9Ga0049080_102647262 10Ga0073926_100528442 11Ga0075464_109139661 12Ga0102861_10811872 13Ga0102828_11851502 14Ga0114363_12021192 15Ga0105098_101685002 16Ga0114918_102792701 17Ga0114918_103491101 18Ga0114968_104364531 19Ga0114970_102264281 20Ga0114970_102698342 21Ga0114975_101048582 22Ga0114979_105089951 23Ga0114969_102067831 24Ga0114969_102074761 25Ga0114974_101212611 26Ga0133913_108640482 27Ga0133913_118308512 28Ga0133913_126878071 29Ga0129318_100644601 30Ga0153805_10352131 31Ga0164293_109522291 32Ga0164292_102789982 33Ga0177922_104546542 34Ga0177922_107831291 35Ga0177922_108352871 36Ga0177922_111904351 37Ga0177922_112882422 38Ga0177922_113019322 39Ga0181350_10975761 40Ga0181350_11280852 41Ga0181347_10757182 42Ga0181347_11213401 43Ga0181362_10531472 44Ga0181365_10197191 45Ga0181365_10275461 46Ga0181365_10943901 47Ga0181365_11454302 48Ga0181344_10902512 49Ga0181356_11552841 50Ga0181358_10486001 51Ga0181358_12042041 52Ga0181357_10652902 53Ga0181357_12975021 54Ga0181349_10748541 55Ga0181349_11751041 56Ga0181346_10507481 57Ga0181346_10562552 58Ga0181346_10571122 59Ga0181348_10847881 60Ga0181348_12681592 61Ga0181355_10547812 62Ga0181355_13564761 63Ga0181359_11096221 64Ga0211736_108352671 65Ga0211734_107815491 66Ga0211734_108334321 67Ga0211734_111414851 68Ga0211726_101636992 69Ga0211735_112920291 70Ga0211731_107484771 71Ga0208852_10041281 72Ga0222713_101965101 73Ga0222713_106815551 74Ga0222712_101409401 75Ga0222712_101446791 76Ga0222712_106180151 77Ga0196889_10227451 78Ga0181354_11891952 79Ga0181354_12028222 80Ga0181351_10554622 81Ga0181351_12333201 82Ga0208800_10297152 83Ga0208923_10141851 84Ga0255123_10751362 85Ga0208975_11324401 86Ga0209769_10458951 87Ga0209704_12178232 88Ga0209442_10677792 89Ga0209296_10761022 90Ga0209107_100884711 91Ga0209107_103786602 92Ga0209354_100980261 93Ga0209354_102821281 94Ga0209253_106850261 95Ga0209191_10707212 96Ga0307377_102125512 97Ga0315293_109070371 98Ga0315294_108191291 99Ga0315278_122156442 100Ga0315274_105334412 101Ga0315274_118265842 102Ga0315284_120915452 103Ga0315284_123420271 104Ga0334982_0331525_2_202 105Ga0334992_0097713_1460_1576 106Ga0334994_0109032_3_125 107Ga0334979_0162005_1228_1344 108Ga0335021_0170497_1082_1228 109Ga0335021_0201439_906_1109 110Ga0335021_0366563_2_118 111Ga0335023_0109230_3_191 112Ga0335023_0252853_818_967 113Ga0334987_0166379_1486_1593 114Ga0334995_0150729_3_197 115Ga0334990_0590717_1_174 116Ga0335028_0133417_3_113 117Ga0335022_0125986_1486_1608 118Ga0335022_0184525_2_112 119Ga0335029_0362997_729_887 120Ga0335035_0128461_1486_1611 121Ga0335036_0150875_2_166 122Ga0335036_0151187_3_167 123Ga0335037_0097811_1_108 124Ga0335055_0137797_994_1104 125Ga0335063_0110269_1500_1649 126Ga0335033_0391950_1_210 127Ga0335017_0618700_455_559 128Ga0335052_0621305_332_538 129Ga0335007_0154788_1485_1637 130Ga0335007_0179443_1345_1488 131Ga0335048_0115254_1486_1590 132Ga0335048_0604739_304_507
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84 1JGI12421J11937_101534892 2B570J29032_1096045932 3JGI24768J34885_103187742 4Ga0069718_155872432 5Ga0049083_101235912 6Ga0075464_109139661 7Ga0114918_102792701 8Ga0114968_104364531 9Ga0114969_102067831 10Ga0153805_10352131 11Ga0164292_102789982 12Ga0181350_11280852 13Ga0181365_10275461 14Ga0181344_10902512 15Ga0222712_101446791 16Ga0222712_106180151 17Ga0315284_123420271 18Ga0335028_0133417_3_113
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84 1JGI12421J11937_101534892 2B570J29032_1096045932 3JGI24768J34885_103187742 4Ga0069718_155872432 5Ga0049083_101235912 6Ga0075464_109139661 7Ga0114918_102792701 8Ga0114968_104364531 9Ga0114969_102067831 10Ga0153805_10352131 11Ga0164292_102789982 12Ga0181350_11280852 13Ga0181365_10275461 14Ga0181344_10902512 15Ga0222712_101446791 16Ga0222712_106180151 17Ga0315284_123420271 18Ga0335028_0133417_3_113
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 17.65% Coil/Unstructured: 82.35%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF03354	TerL_ATPase	43.18
PF04860	Phage_portal	0.76

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	Mobilome: prophages, transposons [X]	43.18

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.21 %
Unclassified	root	N/A	3.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	3.79 %
Viruses	superkingdom	All Organisms → Viruses	96.21 %

Name	Rank	Taxonomy	Distribution
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	94.70 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.52 %
Unclassified	root	N/A	3.79 %

Name	Rank	Taxonomy	Distribution
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	94.70 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.52 %
Unclassified	root	N/A	3.79 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.52 %
Unclassified	root	N/A	3.79 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	94.70 %

Name	Rank	Taxonomy	Distribution
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	94.70 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.52 %
Unclassified	root	N/A	3.79 %

Name	Rank	Taxonomy	Distribution
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	18.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.52 %
Unclassified	root	N/A	3.79 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.52 %
Unclassified	root	N/A	3.79 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	18.94 %

Scaffold	Taxonomy	Length	IMG/M Link
3300000756\|JGI12421J11937_10153489	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	567	Open in IMG/M
3300002408\|B570J29032_109367697	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	717	Open in IMG/M
3300002408\|B570J29032_109604593	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	926	Open in IMG/M
3300002447\|JGI24768J34885_10318774	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	521	Open in IMG/M
3300004481\|Ga0069718_10139712	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	643	Open in IMG/M
3300004481\|Ga0069718_15587243	Not Available	1086	Open in IMG/M
3300005580\|Ga0049083_10123591	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	892	Open in IMG/M
3300005580\|Ga0049083_10262555	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	581	Open in IMG/M
3300005582\|Ga0049080_10264726	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	559	Open in IMG/M
3300005943\|Ga0073926_10052844	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	789	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	98.48%
Terrestrial	Environmental → Terrestrial	1.52%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	87.88%
Marine	Environmental → Aquatic → Marine	10.61%
Soil	Environmental → Terrestrial → Soil	1.52%

Habitat	Taxonomy	Distribution
Clay	Environmental → Terrestrial → Soil → Clay	0.76%
Coastal	Environmental → Aquatic → Marine → Coastal	2.27%
Ice	Environmental → Aquatic → Freshwater → Ice	0.76%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	3.03%
Lake	Environmental → Aquatic → Freshwater → Lake	49.24%
Lentic	Environmental → Aquatic → Freshwater → Lentic	34.09%
Oceanic	Environmental → Aquatic → Marine → Oceanic	1.52%
River	Environmental → Aquatic → Freshwater → River	0.76%
Sand	Environmental → Terrestrial → Soil → Sand	0.76%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.03%
Unclassified	Environmental → Aquatic → Marine → Unclassified	3.79%

Habitat	Taxonomy	Distribution
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	0.76%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	3.03%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	2.27%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	5.30%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	1.52%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.76%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	43.94%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	30.30%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	3.79%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.03%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	2.27%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	0.76%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.76%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.76%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	1.52%
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	1.52%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	3.03%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	3.79%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	23.48%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	9.85%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	1.52%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	0.76%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	0.76%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	2.27%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	0.76%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	25.00%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	9.85%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.76%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	3.03%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.52%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.76%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	0.76%
Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Sand	0.76%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	5.30%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	1.52%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.76%
Surface Ice	Environmental → Aquatic → Freshwater → Ice → Unclassified → Surface Ice	0.76%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000756	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011	Environmental	Open in IMG/M
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental	Open in IMG/M
3300002447	Freshwater and sediment microbial communities from Lake Ontario - Sta 18 epilimnion Metagenome	Environmental	Open in IMG/M
3300004481	Combined Assembly of Gp0112041, Gp0112042, Gp0112043	Environmental	Open in IMG/M
3300005580	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG MI27MSRF	Environmental	Open in IMG/M
3300005582	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF	Environmental	Open in IMG/M
3300005943	Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T4_4-Nov-14	Environmental	Open in IMG/M
3300006805	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA	Environmental	Open in IMG/M
3300007544	Estuarine microbial communities from the Columbia River estuary - metaG 1449B-3	Environmental	Open in IMG/M
3300007559	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541	Environmental	Open in IMG/M

Showing 1 to 10 of 89 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12421J11937_101534892	3300000756	Freshwater And Sediment	MALFGSKKVSATPAFASAPIQAAAGSAAQVGQFYTYSVGASQELALSVPTVARSIQMIAS
B570J29032_1093676972	3300002408	Freshwater	MALFGSKKVNATPAFASAPVQAAAGSAAQIGDFYAYSVGELQRLALSVPTISRSIQMIAS
B570J29032_1096045932	3300002408	Freshwater	MALFGSKKVSATPAFASAPIQAAAGSAAQVGQFYTYSVGA
JGI24768J34885_103187742	3300002447	Freshwater And Sediment	VRDSEAMALFGSKKVNATPAFASAPVQAAAGSAAQIGDFYAYSVG
Ga0069718_101397121	3300004481	Sediment	MALFGSKKQNATPAFAHEPLQAAAGSAAQIGQFYTYTVGAGAE
Ga0069718_155872432	3300004481	Sediment	MGIFGSKKVNATPAFASVPVQAAAGSAAQIGDYYAYSVGELQRLALSVPTISRSVQMIA
Ga0049083_101235912	3300005580	Freshwater Lentic	MALFGNKKRTPSFTAPPLQAAAGSSAQIGQFYSYSVGASTELALSCATVSRATQM
Ga0049083_102625552	3300005580	Freshwater Lentic	VALFGNKKQTPSFTHAPLQAAAGSAAQVGQFYSYSVGASTELALSCATVARATQMI
Ga0049080_102647262	3300005582	Freshwater Lentic	MALFGSKKVSATPAFASAPIQAAAGSAAQVGQFYTYSVGASQELALSVPTVARS
Ga0073926_100528442	3300005943	Sand	MALFGSKKVNATPAFASAPVQAAAGSAAQVGQFYTYSVGAS
Ga0075464_109139661	3300006805	Aqueous	MALFGSKKQDATPAFAHAPLQAAAGSASQSGLGQF
Ga0102861_10811872	3300007544	Estuarine	MALFGSKKQHATPAFAHEPLNAAAGSAAQIGQFYTYTVGAGAELALSVPTVSRATQMIIS
Ga0102828_11851502	3300007559	Estuarine	MALFGNKKRTPSFTAPPLQAAAGSSAQIGQFYSYSVGASTELALSCATVSR
Ga0114363_12021192	3300008266	Freshwater, Plankton	MALFGSKKVSATPAFASAPIQAAAGSAAQVGQFYTYSVGASQELALSVPTVARSIQMIASMVGCLELK
Ga0105098_101685002	3300009081	Freshwater Sediment	MGIFGSKKVNATPAFASVPVQAAAGAASQVGEYYAYSVGELQRLALSVPTVSRS
Ga0114918_102792701	3300009149	Deep Subsurface	MGLFSKRVNATPAFASAPVQAAAGAAAQINNFSNYS
Ga0114918_103491101	3300009149	Deep Subsurface	MGDSQVMGLFSKRVNATPAFASAPVQAAAGAAAQINNFSNYS
Ga0114968_104364531	3300009155	Freshwater Lake	VALFGKGKQTPSFTQAPPLQAAAGSAPQVVGQFFSYSVGSSTELALSNATVARATQMILSMVGCLPLRHYTKQWT
Ga0114970_102264281	3300009163	Freshwater Lake	VALFGKGKQTPSFTQAPPLQAAAGSAPQVVGQFFSYSVGSSTELALSNATVARATQMILSMVGCL
Ga0114970_102698342	3300009163	Freshwater Lake	VALFGNRKQTPSFTQAPPLQAAAGSAPQVVGQFFSYSVGSSTELALSNATVARATQMILSMVGCL
Ga0114975_101048582	3300009164	Freshwater Lake	VMALFGSKKVNATPAFASAPIQAAAGSAAQVGQFYSYSVGASQEL
Ga0114979_105089951	3300009180	Freshwater Lake	MALFGSKKVNATPAFASAPVQAAAGSAAQVGQFYSYSVGASQELALS
Ga0114969_102067831	3300009181	Freshwater Lake	VALFGNRKQTPSFTQAPPLQAAAGSAPQVVGQFFSYSVGSSTELALSNATV
Ga0114969_102074761	3300009181	Freshwater Lake	VALFGKGKQTPSFTQAPPLQAAAGSAPQVVGQFFSYSVGSSTELALSNATV
Ga0114974_101212611	3300009183	Freshwater Lake	MALFGSKKVNATPAFASAPIQAAAGSAAQVGQFYSYSVGASQELALSVPTVARSIQMI
Ga0133913_108640482	3300010885	Freshwater Lake	MALFGSKKVNATPAFASAPIQAAAGSAAQVGQFYSYSVGASQELALSVPTV
Ga0133913_118308512	3300010885	Freshwater Lake	VALFGKGKQTPSFTQAPPLQAAAGSAPQVVGQFFSYSVGSSTELALS
Ga0133913_126878071	3300010885	Freshwater Lake	MALFGSKKVNATPAFASAPIQAAAGSAAQVGQFYSYSVGASQELALS
Ga0129318_100644601	3300011009	Freshwater To Marine Saline Gradient	MALFGSKKVNATPAFASAPIQAAAGSAAQVGQFYTYSVG
Ga0153805_10352131	3300012013	Surface Ice	MALFGSKKQDATPAFAHAPLQAAAGSASQSGLGQFWSYTVGAASELALSVPTVSR
Ga0164293_109522291	3300013004	Freshwater	MALFGSKKVSATPAFASAPIQAAAGSAAQVGQFYTYPIGASQELALSV
Ga0164292_102789982	3300013005	Freshwater	MALFGSKKVNATPAFASAPVQAAAGSAAQIGDYNASSVGELQRLALSV
Ga0177922_104546542	3300013372	Freshwater	VALFGNKKQTPSFTSAPLQAAAGSAAQVGQFYSYSVGASTELALSCATVARATQMI
Ga0177922_107831291	3300013372	Freshwater	MALFGSKKQDATPAFAHAPLQAAAGSASQSGLGQFWSYTVGAASELALSV
Ga0177922_108352871	3300013372	Freshwater	VALFGNRKQSPSFTSAPLQAAAGSAAQVGQFYSYSVGASTELALSCATV
Ga0177922_111904351	3300013372	Freshwater	VALFGNKKQTPSFTSAPLQAAAGSAAQVGQFYSYSVGASTELALSC
Ga0177922_112882422	3300013372	Freshwater	MALFGSKKVSATPAFASAPIQAAAGSAAQVGQFYTYS
Ga0177922_113019322	3300013372	Freshwater	MALFGSKKVSATPAFASAPIQAAAGSAAQVGQFYTYSVGASQELALSVPTVA
Ga0181350_10975761	3300017716	Freshwater Lake	VALFGNKKQTPSFTHAPLQAAAGSAAQVGQFYSYSVGASTELALSCATVARATQMILSMV
Ga0181350_11280852	3300017716	Freshwater Lake	VALFGNKKQTPSFTHAPLQAAAGSAAQVGQFYSYSVGASTE
Ga0181347_10757182	3300017722	Freshwater Lake	MALFGSKKVNATPAFASAPVQAAAGSAAQVGQFYTYSVGASQELALSVPTVARSIQMIAS
Ga0181347_11213401	3300017722	Freshwater Lake	MALFGSKKQDATPAFAHAPLQAAAGSASSGLGQFWSYTVGAASELALSVPTVSRATQM
Ga0181362_10531472	3300017723	Freshwater Lake	VALFGNKKQTPSFTSPPLQAAAGSSAMVGQFYSYSVGASTELALSNATVARATQMILS
Ga0181365_10197191	3300017736	Freshwater Lake	MALFGSKKVNATPAFASAPVQAAAGSSAQVGQFYTYSVGASQELALSVPTVARSIQMIAS
Ga0181365_10275461	3300017736	Freshwater Lake	VALFGNKKQTPSFTHAPLQAAAGSAAQVGQFYSYSVGASTELALSFSFFSSFFLL
Ga0181365_10943901	3300017736	Freshwater Lake	VKESQGMALFGSKKVNATPAFASAPVQAAAGSAAQNVGQFYTYSVGASQELALSVPTVAR
Ga0181365_11454302	3300017736	Freshwater Lake	VALFGNKKQTPSFTHAPLQAAAGSAAQVGQFYSYSVGAST
Ga0181344_10902512	3300017754	Freshwater Lake	MALFSRSKQHATPAFAHEPLQAAAGSAASGLGQFWSYTVGAASELALSVPTVSRATQMIISLVGSLPLRHYT
Ga0181356_11552841	3300017761	Freshwater Lake	MALFGSKKQDATPAFAHAPLQAAAGSASQSGLGQFWSYT
Ga0181358_10486001	3300017774	Freshwater Lake	VALFGNKKQTPSFTHAPLQAAAGSAAQVGQFYSYSV
Ga0181358_12042041	3300017774	Freshwater Lake	MALFGSKKQDATPAFAHAPLQAAAGSASQSGLGQFWSYTVGAASELAL
Ga0181357_10652902	3300017777	Freshwater Lake	MALFGNKKRTPSFTAPPLQAAAGSSAQIGQFYSYSVGASTELALSCATVSRATQMILSMVGCLPLRHY
Ga0181357_12975021	3300017777	Freshwater Lake	MALFGSKKVNATPAFASAPVQAAAGSAAQVGQFYTYSVGASQEL
Ga0181349_10748541	3300017778	Freshwater Lake	VKESQGMALFGSKKVNATPAFASAPVQAAAGSAAQNVGQFYTYSVGASQELALSVPTVARSI
Ga0181349_11751041	3300017778	Freshwater Lake	VALFGNKKQTPSFTSPPLQAAAGSSAMVGQFYSYSVGASTEI
Ga0181346_10507481	3300017780	Freshwater Lake	VAIFNRKQTPSFTAAPLQAAAGSAAQVGQFYSYSVGASTELALSCATVARATQMILSMVG
Ga0181346_10562552	3300017780	Freshwater Lake	MALFGSKKVSATPAFASAPIQAAAGSAAQVGQFYTYSVGASQELALSVP
Ga0181346_10571122	3300017780	Freshwater Lake	MALFGSKKVNATPAFASAPVQAAAGSAAQVGQFYTYSVGASQELALSV
Ga0181348_10847881	3300017784	Freshwater Lake	MALFGSKKQDATPAFAHAPLQAAAGSASQSGLGQFWSYTV
Ga0181348_12681592	3300017784	Freshwater Lake	VALFGNKKQAPSFTSSPLQAAAGSSAMVGQFYSYSVGASTELALSNATVARATQMILSMV
Ga0181355_10547812	3300017785	Freshwater Lake	VALFGNKKQTPSFTHAPLQAAAGSAAQVGQFYSYSVGASTELALSCATVARATQM
Ga0181355_13564761	3300017785	Freshwater Lake	MALFGSKKVSATPAFASAPIQAAAGSAAQVGQFYTYSV
Ga0181359_11096221	3300019784	Freshwater Lake	VALFGNKKQTPSFTSPPLQAAAGSSAMVGQFYSYSVGASTELALSNATVARATQMI
Ga0211736_108352671	3300020151	Freshwater	MALFGSKKVNATPAFASAPVQAAAGAAAQVGEFYTYSVGELQRLALSVPTIA
Ga0211734_107815491	3300020159	Freshwater	MALFGSKKQDATPAFAQAPLQAAAGSASQSGLGPFWSFTVGAASELALSVPTVSRATQMIIS
Ga0211734_108334321	3300020159	Freshwater	MALFGSKKQDATPAFAHAPLQAAAGSASQSGLGQFWSYTVGAASELALSVPTVS
Ga0211734_111414851	3300020159	Freshwater	MALFGSKKVNATPAFASAPVQAAAGAAAQVGEFYTYSVGELQRLA
Ga0211726_101636992	3300020161	Freshwater	MALFGSKKVNATPAFASAPVQAAAGAAAQVGEFYTYSVGELQRLALSVPTIARSVQMIAS
Ga0211735_112920291	3300020162	Freshwater	MGLFGSKKVNATPAFASAPVQAAAGSAAQIGDFYAY
Ga0211731_107484771	3300020205	Freshwater	MALFGSKKLNATPAFASAPVQAAAGAAAQVGEFYTYSVGELQRLALSVPTIA
Ga0208852_10041281	3300020560	Freshwater	MALFGSKKQDATPAFAHAPLQAAAGSASQSGLGQFWSYTVGAASELALSVPTVSRATQM
Ga0222713_101965101	3300021962	Estuarine Water	MALFGSKKVSATPAFAYAPIQAAAGSAAQVGQFYTYSVGASQELALSVPTVARSIQMI
Ga0222713_106815551	3300021962	Estuarine Water	VALFGNKKQTPSFTSPPLQAAAGSSAQVGQFYSYSVGASTEL
Ga0222712_101409401	3300021963	Estuarine Water	VALFGNKKQTPSFTAAPLQAAAGSAAQVGQFYSYSVGASTELALSCATVAR
Ga0222712_101446791	3300021963	Estuarine Water	VALFGKTKATPAFGHAPIQAAAGSAAQIGDFYTYS
Ga0222712_106180151	3300021963	Estuarine Water	MALFGSKKVNASPAFGSAPIQAAAGQAAQVNAFYSFSVGASQEL
Ga0196889_10227451	3300022072	Aqueous	MALFGSKKQDATPAFAHAPLQAAASSASQSGLGQFWSYTVGAASELALSVPTVSRATQMIISLVGSLPLRH
Ga0181354_11891952	3300022190	Freshwater Lake	VALFGNKKQTPSFTHAPLQAAAGSAAQVGQFYSYSVGA
Ga0181354_12028222	3300022190	Freshwater Lake	MALFGSKKVNATPAFASAPVQAAAGSAAQVGQFYTYSVGASQELALSVPT
Ga0181351_10554622	3300022407	Freshwater Lake	VALFGNKKQTPSFTSPPLQAAAGSSAMVGQFYSYSVGASTELALSNAT
Ga0181351_12333201	3300022407	Freshwater Lake	MALFGNKKVNATPAFASAPVQAAAGSAAQVGQFYTYSVGASQELALSVPTVA
Ga0208800_10297152	3300027193	Estuarine	VALFGNKKPSPSFTAAPLQAAAGSAAQVGQFYSYSVGASTELALSCATVARA
Ga0208923_10141851	3300027320	Estuarine	VALFGNKKPSPSFTAAPLQAAAGSAAQVGQFYSYSVGASTELALSCATVARATQ
Ga0255123_10751362	3300027589	Freshwater	MALFGSKKQDATPAFAHAPLQAAAGSASQSGLGQFWSYTVGAASELALSVPTVSRATQMIIS
Ga0208975_11324401	3300027659	Freshwater Lentic	VMALFGSKKVNATPAFASAPVQAAAGSAAQIGDFYAYSV
Ga0209769_10458951	3300027679	Freshwater Lake	MALFGSKKQDATPAFAHAPLQAAAGSASQSGLGQFWSYTVGAASELALSVPTVSRATQMIISLVG
Ga0209704_12178232	3300027693	Freshwater Sediment	MALFSRSKQHATPAFAHEPLQAAAGSAASGLGQFWSYTVGAASELALSVPTVSRATQM
Ga0209442_10677792	3300027732	Freshwater Lake	MALFGSKKQDATPAFAHAPLQAAAGSASQSGLGQFWSYTVGAASELALSVPTVSRATQMIISLVGSL
Ga0209296_10761022	3300027759	Freshwater Lake	VRDSQVMALFGSKKVNATPAFASAPIQAAAGSAAQVGQFYSYSVGASQELALSVPTVARSIQMIA
Ga0209107_100884711	3300027797	Freshwater And Sediment	MALFGSKKVSATPAFASAPIQAAAGSAAQVGQFYTYSVGASQELALSVPTVARSIQMIASMVGC
Ga0209107_103786602	3300027797	Freshwater And Sediment	MALFGSKKVSATPAFASAPIQAAAGSAAQVGQFYTYSVGASQELA
Ga0209354_100980261	3300027808	Freshwater Lake	MALFGSKKQDATPAFAHAPLQAAAGSASSGLGQFWSYTVGAASELA
Ga0209354_102821281	3300027808	Freshwater Lake	MALFGNKKRTPSFTAPPLQAAAGSSAQIGQFYSYSVGASTELALSCATVS
Ga0209253_106850261	3300027900	Freshwater Lake Sediment	MALFSRSKRNATPAFAHEPLNAAAGSAAQGGLGQFWSYHVGAASELALSVPTVSRATQMIISLV
Ga0209191_10707212	3300027969	Freshwater Lake	MALFGSKKVNATPAFASAPIQAAAGSAAQVGQFYSYSVGASQELALSVPTVAR
Ga0307377_102125512	3300031673	Soil	MGLFSKRVNATPAFASAPVQAAAGAAAQINNFSNYSVG
Ga0315293_109070371	3300031746	Sediment	VALFGNKKPSPSFTAAPLQAAAGSAAQVGQFYSYSVGASTEL
Ga0315294_108191291	3300031952	Sediment	VALFGNRKQSPSFTSAPLQAAAGSAAQVGQFYSYSVGASTELALSCATVARATQMILSMV
Ga0315278_122156442	3300031997	Sediment	VALFGNKKPSPSFTAAPLQAAAGSAAQVGQFYSYSVGASTELALSCATVARATQMILSMVGCLPLRHYT
Ga0315274_105334412	3300031999	Sediment	MALFGNKKVNATPAFASAPVQAAAGSANQVGAFYSYSVGAS
Ga0315274_118265842	3300031999	Sediment	MALFGNKKINATPAFASAPVQAAAGSANQVGAFYSYSVGASQ
Ga0315284_120915452	3300032053	Sediment	VALFGKGKQTPSFTQAPPLQAAAGSAPQVVGQFFSYSVGSSTELALSNATVARATQMI
Ga0315284_123420271	3300032053	Sediment	MALFGNKKINATPAFASAPVQAAAGSANQVGAFYSYSVGASQELALSVPTV
Ga0334982_0331525_2_202	3300033981	Freshwater	MALFGSKKVSATPAFASAPIQAAAGSAAQVGQFYTYSVGASQELALSVPTVARSIQMIASMVGCLEL
Ga0334992_0097713_1460_1576	3300033992	Freshwater	MALFGNKKVNATPAFASAPIQAAAGSAAQVGQFYTYSVG
Ga0334994_0109032_3_125	3300033993	Freshwater	MALFGSKKQDATPAFAHAPLQAAAGSASQSGLGQFWSYTVG
Ga0334979_0162005_1228_1344	3300033996	Freshwater	MALFGSKKVSATPAFASAPIQAAAGSAAQVGQFYTYSVG
Ga0335021_0170497_1082_1228	3300034023	Freshwater	MALFGSKKQDATPAFAHAPLQAAAGSASQSGLGQFWSYTVGAASELALS
Ga0335021_0201439_906_1109	3300034023	Freshwater	MRESLVMALFGSKKVNATPAFASVPVQAAAGAASQVGEYYAYSVGELQRLALSVPTVSRSIQMIASMV
Ga0335021_0366563_2_118	3300034023	Freshwater	MMALFGSKKVSATPAFASAPIQAAAGSAAQVGQFYTYSV
Ga0335023_0109230_3_191	3300034050	Freshwater	MALFGSKKQDATPAFAHAPLQAAAGSASQSGLGQFWSYTVGAASELALSVPTVSRATQMIISL
Ga0335023_0252853_818_967	3300034050	Freshwater	MALFGSKKVNATPAFASAPVQAAAGSAAQIGDFYAYSVGELQRLALSVPT
Ga0334987_0166379_1486_1593	3300034061	Freshwater	MALFGSKKVSATPAFASAPIQAAAGSAAQVGQFYTY
Ga0334995_0150729_3_197	3300034062	Freshwater	MALFGSKKVSATPAFASAPIQAAAGSAAQVGQFYTYSVGASQELALSVPTVARSIQMIASMVGCL
Ga0334990_0590717_1_174	3300034068	Freshwater	MALFGSKKQDATPAFAHAPLQAAAGSASQSGLGQFWSYTVGAASELALSVPTVSRATQ
Ga0335028_0133417_3_113	3300034071	Freshwater	MRESLVMALFGSKKVSATPAFASAPIQAAAGSAAQVG
Ga0335022_0125986_1486_1608	3300034095	Freshwater	MALFGSKKVSATPAFASAPIQAAAGSAAQVGQFYTYSVGAS
Ga0335022_0184525_2_112	3300034095	Freshwater	MALFGSKKVNATPAFASAPVQAAAGSAAQIGDYYAYS
Ga0335029_0362997_729_887	3300034102	Freshwater	MRESLVMALFGSKKVSATPAFASAPIQAAAGSAAQVGQFYTYSVGASQELALS
Ga0335035_0128461_1486_1611	3300034105	Freshwater	MALFGSKKVSATPAFASAPIQAAAGSAAQVGQFYTYSVGASQ
Ga0335036_0150875_2_166	3300034106	Freshwater	MALFGSKKQNATPAFASAPIQAAAGSAAQVGQFYTYSVGASQELALSVPTVARSI
Ga0335036_0151187_3_167	3300034106	Freshwater	MALFGSKKVNATPAFASAPVQAAAGSAAQIGDFYAYSVGELQRLALSVPTISRSI
Ga0335037_0097811_1_108	3300034107	Freshwater	MALFGNKKVSATPAFASAPIQAAAGSAAQVGQFYTY
Ga0335055_0137797_994_1104	3300034110	Freshwater	MRDSQVMALFGSKKVSATPAFASAPIQAAAGSAAQVG
Ga0335063_0110269_1500_1649	3300034111	Freshwater	MALFGSKKVSATPAFASAPIQAAAGSAAQVGQFYTYSVGASQELALSVPT
Ga0335033_0391950_1_210	3300034117	Freshwater	MALFGSKKVNATPAFASAPVQAAAGSAAQVGQFYTYSVGASQELALSVPTVARSIQMIASMVGCLKLEHY
Ga0335017_0618700_455_559	3300034167	Freshwater	MALFGSKKVNATPAFASAPVQAAAGSAAQIGDFNA
Ga0335052_0621305_332_538	3300034279	Freshwater	MALFGSKKVSATPAFASAPIQAAAGSAAQVGQFYTYSVGASQELALSVPTVARSIQMIASMVGCLELKH
Ga0335007_0154788_1485_1637	3300034283	Freshwater	MALFGSKKVNATPAFASAPVQAAAGSAAQIGDFNAYSVGELQRLALSVPTI
Ga0335007_0179443_1345_1488	3300034283	Freshwater	MMALFGSKKVNATLAFASAPVQAAAGSAAQIGDFYAYSVGELQRLALS
Ga0335048_0115254_1486_1590	3300034356	Freshwater	MALFGSKKVSATPAFASAPIQAAAGSAAQVGQFYT
Ga0335048_0604739_304_507	3300034356	Freshwater	MALFGSKKQDATPAFAHAPLQAAAGSASQSGLGQFWSYTVGAASELALSVPTVSRATQMIISLVGSLP

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F060699

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences