Metagenome Family F060668

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F060668
Family Type	Metagenome
Number of Sequences	132
Average Sequence Length	99 residues
Representative Sequence	MIVAVALAATIWGAVTGFYGTRHWRPVDVCKATYMSDRFAVVKATIHGTPHVAALHYLDRRTGWVVMWADGRVNRRIGPSTRPLVLAEVTRLKAKCLAP
Number of Associated Samples	97
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	74.24 %
% of genes near scaffold ends (potentially truncated)	27.27 %
% of genes from short scaffolds (< 2000 bps)	85.61 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.76

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (80.303 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (10.606 % of family members)
Environment Ontology (ENVO)	Unclassified (45.455 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (52.273 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 25.98% β-sheet: 32.28% Coil/Unstructured: 41.73%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.76
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.76
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SCOP family	SCOP domain	Representative PDB	TM-score
b.69.14.1: Nucleoporin domain	d1xksa_	1xks	0.6
b.69.14.1: Nucleoporin domain	d1xksa_	1xks	0.6
d.17.1.0: Cystatin/monellin	d5zc1a_	5zc1	0.58
d.17.1.0: Cystatin/monellin	d5zc1a_	5zc1	0.58
b.68.6.2: Calcium-dependent phosphotriesterase	d3srea_	3sre	0.57
d.233.1.1: Inhibitor of vertebrate lysozyme, Ivy	d4ps6a1	4ps6	0.57
b.68.6.2: Calcium-dependent phosphotriesterase	d3srea_	3sre	0.57
d.233.1.1: Inhibitor of vertebrate lysozyme, Ivy	d4ps6a1	4ps6	0.57
d.17.1.0: Cystatin/monellin	d6uioa_	6uio	0.56
d.17.1.0: Cystatin/monellin	d6uioa_	6uio	0.56

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF10589	NADH_4Fe-4S	46.21
PF13510	Fer2_4	21.97
PF02894	GFO_IDH_MocA_C	2.27
PF12697	Abhydrolase_6	0.76
PF03928	HbpS-like	0.76
PF02133	Transp_cyt_pur	0.76
PF07719	TPR_2	0.76
PF13649	Methyltransf_25	0.76
PF02754	CCG	0.76

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG0673	Predicted dehydrogenase	General function prediction only [R]	2.27
COG0247	Fe-S cluster-containing oxidoreductase, includes glycolate oxidase subunit GlcF	Energy production and conversion [C]	0.76
COG2048	Heterodisulfide reductase, subunit B	Energy production and conversion [C]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	81.06 %
Unclassified	root	N/A	18.94 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	81.06 %
Unclassified	root	N/A	18.94 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	80.30 %
Unclassified	root	N/A	18.94 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.76 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	46.97 %
Unclassified	root	N/A	18.94 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.55 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.52 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	0.76 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	43.94 %
Unclassified	root	N/A	18.94 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1.52 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.52 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.52 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %
Candidatus Bathyarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.94 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	13.64 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1.52 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	1.52 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	1.52 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.76 %
unclassified Candidatus Bathyarchaeota	no rank	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.94 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	13.64 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.52 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	1.52 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	1.52 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.76 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.94 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	13.64 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.52 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	1.52 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	0.76 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.76 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.94 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	13.64 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.52 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	1.52 %
unclassified Planctomycetaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae	0.76 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.76 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.94 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	13.64 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.52 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	1.52 %
Planctomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	0.76 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.76 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_100862157	All Organisms → cellular organisms → Bacteria	1097	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100862206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	580	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100862455	All Organisms → cellular organisms → Bacteria	1093	Open in IMG/M
3300000956\|JGI10216J12902_100498583	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300000956\|JGI10216J12902_100809917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1364	Open in IMG/M
3300000956\|JGI10216J12902_100986519	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300000956\|JGI10216J12902_100998671	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	876	Open in IMG/M
3300000956\|JGI10216J12902_104355831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	681	Open in IMG/M
3300000956\|JGI10216J12902_104945336	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300000956\|JGI10216J12902_105098744	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300000956\|JGI10216J12902_121192477	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	562	Open in IMG/M
3300001538\|A10PFW1_10228909	All Organisms → cellular organisms → Bacteria → Proteobacteria	1499	Open in IMG/M
3300004081\|Ga0063454_101469835	Not Available	581	Open in IMG/M
3300004114\|Ga0062593_100108645	All Organisms → cellular organisms → Bacteria	1982	Open in IMG/M
3300004114\|Ga0062593_100640858	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1023	Open in IMG/M
3300004114\|Ga0062593_101878245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	661	Open in IMG/M
3300004156\|Ga0062589_100136333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1653	Open in IMG/M
3300004463\|Ga0063356_102333127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	817	Open in IMG/M
3300004643\|Ga0062591_101642993	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	649	Open in IMG/M
3300005093\|Ga0062594_100713344	All Organisms → cellular organisms → Bacteria → Proteobacteria	908	Open in IMG/M
3300005093\|Ga0062594_100980088	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	810	Open in IMG/M
3300005093\|Ga0062594_101238908	Not Available	743	Open in IMG/M
3300005093\|Ga0062594_101976934	Not Available	622	Open in IMG/M
3300005186\|Ga0066676_10771344	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300005329\|Ga0070683_100062187	All Organisms → cellular organisms → Bacteria	3471	Open in IMG/M
3300005329\|Ga0070683_100861493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	869	Open in IMG/M
3300005332\|Ga0066388_102404075	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	956	Open in IMG/M
3300005332\|Ga0066388_104155474	All Organisms → cellular organisms → Bacteria	738	Open in IMG/M
3300005336\|Ga0070680_100002901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	12740	Open in IMG/M
3300005344\|Ga0070661_101887807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	508	Open in IMG/M
3300005355\|Ga0070671_100696323	Not Available	881	Open in IMG/M
3300005356\|Ga0070674_101432871	Not Available	619	Open in IMG/M
3300005445\|Ga0070708_101545614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	618	Open in IMG/M
3300005456\|Ga0070678_100054126	All Organisms → cellular organisms → Bacteria	2922	Open in IMG/M
3300005456\|Ga0070678_102303506	Not Available	511	Open in IMG/M
3300005457\|Ga0070662_101359281	Not Available	612	Open in IMG/M
3300005459\|Ga0068867_102102201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	535	Open in IMG/M
3300005529\|Ga0070741_10001981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	57693	Open in IMG/M
3300005529\|Ga0070741_10034623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6818	Open in IMG/M
3300005529\|Ga0070741_10035812	All Organisms → cellular organisms → Bacteria	6642	Open in IMG/M
3300005529\|Ga0070741_10088501	All Organisms → cellular organisms → Bacteria	3355	Open in IMG/M
3300005535\|Ga0070684_100155717	All Organisms → cellular organisms → Bacteria → Proteobacteria	2072	Open in IMG/M
3300005564\|Ga0070664_100570104	Not Available	1048	Open in IMG/M
3300005614\|Ga0068856_100692221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1040	Open in IMG/M
3300005618\|Ga0068864_102032887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	581	Open in IMG/M
3300005764\|Ga0066903_100227750	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	2837	Open in IMG/M
3300005764\|Ga0066903_100519457	All Organisms → cellular organisms → Bacteria	2027	Open in IMG/M
3300005764\|Ga0066903_100753958	All Organisms → cellular organisms → Bacteria	1730	Open in IMG/M
3300005764\|Ga0066903_105129030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	694	Open in IMG/M
3300005764\|Ga0066903_106027710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	635	Open in IMG/M
3300005937\|Ga0081455_10119785	All Organisms → cellular organisms → Bacteria	2075	Open in IMG/M
3300006034\|Ga0066656_10963361	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	547	Open in IMG/M
3300006854\|Ga0075425_100098514	All Organisms → cellular organisms → Bacteria	3322	Open in IMG/M
3300006871\|Ga0075434_100270178	All Organisms → cellular organisms → Bacteria	1720	Open in IMG/M
3300006881\|Ga0068865_101148689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	686	Open in IMG/M
3300007076\|Ga0075435_101704497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	553	Open in IMG/M
3300009012\|Ga0066710_102897568	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	673	Open in IMG/M
3300009090\|Ga0099827_10626782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	928	Open in IMG/M
3300009098\|Ga0105245_10209727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1875	Open in IMG/M
3300009098\|Ga0105245_10730750	All Organisms → cellular organisms → Bacteria → Proteobacteria	1025	Open in IMG/M
3300009098\|Ga0105245_11765451	Not Available	671	Open in IMG/M
3300009148\|Ga0105243_10283502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1493	Open in IMG/M
3300009162\|Ga0075423_10497618	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	1282	Open in IMG/M
3300009162\|Ga0075423_12097500	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300009176\|Ga0105242_10084783	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2656	Open in IMG/M
3300009177\|Ga0105248_12995540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	538	Open in IMG/M
3300009545\|Ga0105237_10732406	All Organisms → cellular organisms → Bacteria	995	Open in IMG/M
3300009545\|Ga0105237_10939801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	872	Open in IMG/M
3300009553\|Ga0105249_13294971	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	519	Open in IMG/M
3300010047\|Ga0126382_11891710	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300010358\|Ga0126370_11221516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	700	Open in IMG/M
3300010358\|Ga0126370_11745017	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300010362\|Ga0126377_12053161	Not Available	648	Open in IMG/M
3300011003\|Ga0138514_100061932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	772	Open in IMG/M
3300012189\|Ga0137388_11527544	Not Available	605	Open in IMG/M
3300012350\|Ga0137372_10053918	All Organisms → cellular organisms → Bacteria	3537	Open in IMG/M
3300012350\|Ga0137372_10133574	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	2044	Open in IMG/M
3300012355\|Ga0137369_10249156	All Organisms → cellular organisms → Bacteria	1344	Open in IMG/M
3300012360\|Ga0137375_10585957	Not Available	931	Open in IMG/M
3300012913\|Ga0157298_10206114	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	635	Open in IMG/M
3300012955\|Ga0164298_10805922	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300012960\|Ga0164301_11034534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	648	Open in IMG/M
3300012984\|Ga0164309_10445635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	978	Open in IMG/M
3300012985\|Ga0164308_10116910	All Organisms → cellular organisms → Bacteria	1909	Open in IMG/M
3300012987\|Ga0164307_10522634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	901	Open in IMG/M
3300012989\|Ga0164305_10549061	Not Available	919	Open in IMG/M
3300012989\|Ga0164305_11877850	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	543	Open in IMG/M
3300013297\|Ga0157378_11258116	Not Available	780	Open in IMG/M
3300013297\|Ga0157378_12877250	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	534	Open in IMG/M
3300013306\|Ga0163162_12953427	Not Available	547	Open in IMG/M
3300013307\|Ga0157372_12262673	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	624	Open in IMG/M
3300013307\|Ga0157372_13113914	Not Available	529	Open in IMG/M
3300013308\|Ga0157375_10587528	Not Available	1274	Open in IMG/M
3300013501\|Ga0120154_1147553	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	530	Open in IMG/M
3300013768\|Ga0120155_1159588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	609	Open in IMG/M
3300014325\|Ga0163163_10529002	All Organisms → cellular organisms → Bacteria	1241	Open in IMG/M
3300014745\|Ga0157377_11028933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	626	Open in IMG/M
3300014968\|Ga0157379_11691103	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300014969\|Ga0157376_12504435	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	556	Open in IMG/M
3300015371\|Ga0132258_10028161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	12473	Open in IMG/M
3300015373\|Ga0132257_103912249	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300015374\|Ga0132255_102667957	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300017792\|Ga0163161_11266410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	640	Open in IMG/M
3300018032\|Ga0187788_10464459	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300018073\|Ga0184624_10411735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	598	Open in IMG/M
3300018431\|Ga0066655_11032365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	570	Open in IMG/M
3300019356\|Ga0173481_10571882	Not Available	589	Open in IMG/M
3300024325\|Ga0247678_1031550	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	831	Open in IMG/M
3300025885\|Ga0207653_10433303	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300025904\|Ga0207647_10396316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	778	Open in IMG/M
3300025912\|Ga0207707_10003493	All Organisms → cellular organisms → Bacteria	13911	Open in IMG/M
3300025917\|Ga0207660_10010242	All Organisms → cellular organisms → Bacteria	6076	Open in IMG/M
3300025927\|Ga0207687_10638583	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	900	Open in IMG/M
3300025933\|Ga0207706_10558495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	985	Open in IMG/M
3300025935\|Ga0207709_10657887	Not Available	835	Open in IMG/M
3300025937\|Ga0207669_11078377	Not Available	677	Open in IMG/M
3300025941\|Ga0207711_11943915	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	531	Open in IMG/M
3300025942\|Ga0207689_11275257	Not Available	618	Open in IMG/M
3300026078\|Ga0207702_10194999	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1874	Open in IMG/M
3300026078\|Ga0207702_11303805	Not Available	720	Open in IMG/M
3300026078\|Ga0207702_12252539	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	533	Open in IMG/M
3300026118\|Ga0207675_100483778	Not Available	1230	Open in IMG/M
3300026121\|Ga0207683_10012247	All Organisms → cellular organisms → Bacteria	7321	Open in IMG/M
3300026142\|Ga0207698_11042252	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	829	Open in IMG/M
3300026550\|Ga0209474_10698196	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300028577\|Ga0265318_10103482	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1047	Open in IMG/M
3300028793\|Ga0307299_10373163	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	535	Open in IMG/M
3300028807\|Ga0307305_10368300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	651	Open in IMG/M
3300028828\|Ga0307312_10867974	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	598	Open in IMG/M
3300030336\|Ga0247826_11131352	Not Available	626	Open in IMG/M
3300031740\|Ga0307468_100375450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1073	Open in IMG/M
3300032003\|Ga0310897_10590314	Not Available	548	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	58.33%
Host-Associated	Host-Associated	41.67%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	57.58%
Plants	Host-Associated → Plants	41.67%
Aquatic	Environmental → Aquatic	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	56.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere	25.00%
Rhizoplane	Host-Associated → Plants → Rhizoplane	15.91%
Sediment	Environmental → Aquatic → Sediment	0.76%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.76%
Roots	Host-Associated → Plants → Roots	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	18.94%
Loam	Environmental → Terrestrial → Soil → Loam	12.12%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	11.36%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.06%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.27%
Soil	Host-Associated → Plants → Rhizoplane → Soil	2.27%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.76%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.76%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.76%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	18.94%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	12.12%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	11.36%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.06%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.06%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.30%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.27%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.27%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	2.27%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.52%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.76%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.76%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.76%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.76%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	10.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	6.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.30%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	5.30%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.55%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	4.55%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.55%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.03%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.03%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.03%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	2.27%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.27%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.27%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	2.27%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.27%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.52%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.52%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.52%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.52%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.52%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.52%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.52%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.76%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.76%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.76%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.76%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.76%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.76%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001538	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illumina	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300013501	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0.25M	Environmental	Open in IMG/M
3300013768	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0M	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300024325	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK19	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300028577	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG	Host-Associated	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1008621571	3300000364	Soil	IVAGLSIWGAVTGFYGTKQWEPVKTCQATYRGDRFAMVEAKIHGRRHIAALHLLNAKRGWVVMWADGKVNRKIGPSTAPLVRAEVTRLKAQCLAP*
INPhiseqgaiiFebDRAFT_1008622062	3300000364	Soil	MIAAIVAGLSIWGSITGFYGTKHWQPLKVCQTTYRGDRFAMVQARIAGRRHIAALHLLNAKRGWVVMWADGKVNRKIGPSTAPLVLAEVTRLKAKCLAP*
INPhiseqgaiiFebDRAFT_1008624552	3300000364	Soil	MTLIALAVTIWGAVTGFYGTRHWSPIDVCKATYRGDRFALVQARIGGRRHIAALHLYSAKRGWVVMWADGRVNPKIDPFTRPLVTSEVTRLKAKCLAP*
JGI10216J12902_1004985832	3300000956	Soil	MTALALVATIWAAVTGFYGTRHWKPIDVCKATYLSDRFALVQARIHGTRHVAALHYYSAKRGWVVMWADGRVNPKIGPSTSPLVLAEVTRLKAKCLAP*
JGI10216J12902_1008099173	3300000956	Soil	MSIPLVMASAVSAFVVSVAPTPATLWGAVTGFFGTRAWQPVDVCQARYMGDRFAFVQLRLHGRRHLAALHLYSARRGWVVMWADGHVNRRIGQSTRPLVLAEVTRLKAQCLAP*
JGI10216J12902_1009865192	3300000956	Soil	VIVAALVATIWAAVTGFYGTRHWTPIDVCKATYMGDHFALVQARIHGRRHIAALHFYSAKRGWVVMWADGQVNPKIGISIRPLVLAEVTRLKAKCLAP*
JGI10216J12902_1009986711	3300000956	Soil	VTLLVAAATIWGAVTGFYGTRHWQPLDVCEARYLGDRFALVQAKIAGRRHIAALHLYNARTGWVVMWSDGHVNHKIGSSTRPLVLGEVTRLKAKCLAP*
JGI10216J12902_1043558312	3300000956	Soil	MIVAVVLAATIWGAVTGFYGTRHWQPVDVCKASYLGDRFAIVKATIRGTPHVAALHYLDRRRGWVVMWADGKVNRRIGPSTRPLVLAEVTRLKAKCLAP*
JGI10216J12902_1049453362	3300000956	Soil	MIVAALVATIWAAVTGFYGTRHWTPIDVCKASYLQDRFALVQANIHGRRHIAALHYYSAKRGWVVMWADGHVNPKVPGSIHPLVLAEVTRLKAKCLAP*
JGI10216J12902_1050987442	3300000956	Soil	MIVAALVATIWAAVTGFYGTRHWTPIDVCRGSYLQDRFALVQANIHGRRHIAALHYYNAKRGWVVMWADGRVNPKVPGSIRPLVLAEVTRLKAKCLAP*
JGI10216J12902_1211924772	3300000956	Soil	MIALAAAATIWGAVSGFYGTRHWQVLDVCQARYMGDRFALVQAKIAGRRRIAALHLYDARTGWVVMWADGRVNRRIGPSIRPLVLAEVTRLKAKCLAP*
A10PFW1_102289092	3300001538	Permafrost	VRLLASAALILAGATPQTIWKAVTGFYGTRAVTIADICQARYRSDRFALVQVRIAGRRHIAALHLLNAKTGWVVMWSDGKVNRKIGPSTRRLVVAEVTRLKAQCLAP*
Ga0063454_1014698351	3300004081	Soil	LSIWGAISGFYGTKHWQPMKVCQSTYMGDRFAMVQLAIRGRRHIAALHLFSAKRGWVVMWSDGKVSRKIGPSAAPLVLAEVTRLKARCLAP*
Ga0062593_1001086452	3300004114	Soil	MIVAVALAVTIWGAMTGFYGTRQWRPVDVCKATFMGDQFAMVKATINGKPHVAALHYLDRRTGWVVMWADGTVNRRIGPSTRPLVLAEVTRLKAKCLAP*
Ga0062593_1006408582	3300004114	Soil	MIVVVALAATIWGAVTGFYGTRHWRPVDVCKATYMRDHFAMVKATIGGRPHVAALHYFDRRTGWVVMWADGKVNRRIGPSTRPLVLAEVTRLKAKCLAP*
Ga0062593_1018782452	3300004114	Soil	MMVVAALVATIWGAVTGFYGTRHWTPVKVCHATYMGDQFAMVKATIRGRTHVAALHHYSPKVGWIVMWADGKVNRTIGPSTRALVLAEVTRLKAQCLAP*
Ga0062589_1001363332	3300004156	Soil	MTIAVAATIWGAVTGFYGTRHWQPLDVCHARYRGDRFALVQARIRGRKHLAALHLYSAQTGWVVMWADGQLNRKIGPSTRPLVLAELTRLKAKCLAP*
Ga0063356_1023331272	3300004463	Arabidopsis Thaliana Rhizosphere	MIVVVAVAATIWGAVTGFYGTRHWRPVDVCKATYMRDHFAMVKATIGGRPHVAALHYFDRRTGWVVMWADGKVNRRIGPSTRPLVLAEVTRLKAKCLAP*
Ga0062591_1016429932	3300004643	Soil	VIATIVAGLSIWGAVTGFYGTKQWEPVKTCQATYRGDRFAMVEAKIHGRRHIAALHLLNAERGWAVMWADGRVNRKVGPSTAPLVRAEVTRLKAQCLAP
Ga0062594_1007133442	3300005093	Soil	VIAAVAVSVSIWGAITGFYGTKHWQPQKVCKAAYMGDQFAIVKLSLRGRPHIAALHLFSAKRGWVVMWADGRVNRRINPRTAALVEAEVTRLKAKCLAP*
Ga0062594_1009800882	3300005093	Soil	VTLLALAATIWAAVTGFYGTRNWAPIDVCKATYMGEDFALVQAKIRGARHIAALHFLNPKRGWVVMWADGRVNPRISPYTRSLVQAEVTRLKAKCL
Ga0062594_1012389082	3300005093	Soil	VIAAAAAALSIWGAITGFYGTKQWQPLKVCKAEYRGDRFAMVQATVKGRRRVAALHLFGAKRGWVVMWADGKVNPKIGPSTAPLVLAEVTRLKAKCLAP*
Ga0062594_1019769342	3300005093	Soil	TGFYGTRHWRPVDVCKATYMSDRFAVVKATIHGTPHVAALHYLDRRTGWVVMWADGRVNRRIGPSTRPLVLAEVTRLKAKCLAP*
Ga0066676_107713442	3300005186	Soil	MIVAALVATIWAAVTGFYGTRHWTAIDVCKASYLNDQFALVQARIHGRRHIAALHYYSAKRGWVVMWADGHVNPKIGISVRPLVLAEVTRLKAKCLAP*
Ga0070683_1000621873	3300005329	Corn Rhizosphere	MIVAVALAATIWGAVTGFYGTRHWRPVDVCKATYMSDRFAVVKATIHGTPHVAALHYLDRRTGWVVMWADGRVNRRIGPSTRPLVLAEVTRLKAKCLAP*
Ga0070683_1008614932	3300005329	Corn Rhizosphere	MIVAVVLAATIWGAVTGFYGTRHWQPVDVCKATYLGDRFAIVKATIRGTPHVAALHYLDRRTGWVVMWADGKVNRRIGPSTRPLVLAEVTRLKAKCLAP*
Ga0066388_1024040751	3300005332	Tropical Forest Soil	VTVLALVATIWAAVTGFYGTRNWTPIDVCKATYMGDNFALVQAKIHGVRHVAALHFLNAKRGWVVMWADGRVNPKIGPYTSSLVQAEVTRLKAKCLAP*
Ga0066388_1041554741	3300005332	Tropical Forest Soil	VTVLAMVATIWAAVTGFYGTRNWTPIDVCKATYMGEDFALVQARIRGKRHIAALHFLNKKRGWVVMWSDGQVNPKISPYTRSLVRAEVTRLKAKCLAP*
Ga0070680_1000029015	3300005336	Corn Rhizosphere	MIVAVALAATIWGAVTGFYGTRHWRPVDVCKATYMSDRFAVVKATIRGTPHVAALHYLDRRTGWVVMWADGRVNRRIGPSTRPLVLAEVTRLKAKCLAP*
Ga0070661_1018878071	3300005344	Corn Rhizosphere	MIVAVALAATIWGAVTGFYGTRHWRPVDVCKATYMSDHFAMVKATIGGRSHVAALHYFDRRTGWVVMWADGKVNRRIGPSTRPLVLAEVTRLKAKCLAP*
Ga0070671_1006963231	3300005355	Switchgrass Rhizosphere	MIVAVALAATIWGAVTGFYGTRQWQPVDVCKATYMGDQFAMVKATVSGKPHVAALHYLDRRTGWVVMWADGTVNRRIGPSTRPLVLAEVTRLKAKCLAP*
Ga0070674_1014328711	3300005356	Miscanthus Rhizosphere	ATIWGAVTGFYGTRHWRPVDVCKATYMSDRFAVVKATIHGTPHVAALHYLDRRTGWVVMWADGRVNRRIGPSTRPLVLAEVTRLKAKCLAP*
Ga0070708_1015456142	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VTLIALAATIWAAVTGFYGTRNWAPIDVCKATYMGEDFALVQAKIRGARHIVALHFLNPKRGWVVMWADGRVNPRISPYTRSLVQAEVTRLKAKCLAP*
Ga0070678_1000541261	3300005456	Miscanthus Rhizosphere	MIVAVALAATIWGAVTGFYGTRHWRPVDVCKATYMSDRFAVVKATIHGTPHVAALHYLDRRTGWVVMWADGRVNRRIGPSTRPLVLAEVTRLKAKC
Ga0070678_1023035062	3300005456	Miscanthus Rhizosphere	AVAAALSIWGAITGFYGTKQWQPLKVCKAEYRGDRFAMVQATVKGRRRVAALHLFGAKRGWVVMWADGKVNPKIGPSTAPLVLAEVTRLKAKCLAP*
Ga0070662_1013592811	3300005457	Corn Rhizosphere	MIVVVALAATIWGAVTGFYGTRHWRPVDVCKATYMGDHFAMVKATIGGRSHVAALHYFDRKTGWVVMWADGKVNRRIGPSTRPLVLAEVTRLKAKCLAP*
Ga0068867_1021022012	3300005459	Miscanthus Rhizosphere	MIAAVAAALSIWGAITGFYGTKQWQPLKVCKAEYRGDRFAMVQATVKGRRRVAALHLFGAKRGWVVMWADGKVNPKIGPSTAPLVLAEVTRLKAKCLAP*
Ga0070741_100019816	3300005529	Surface Soil	MTAAAAFAVLLALAPQTIWKSVTGFYGTRAVVFDRICQSRYMGDRFAFARLRIHGGRHDAALHHLDARRGWVVMWADGKVNRKIGASTRPLVLAEVTRLKTRCLAP*
Ga0070741_1003462310	3300005529	Surface Soil	VIVAALVATIWAAVTGFYGTRQWRPVDVCRARYMGDDFALVQARIHGVRHIAGLHLYSARRGWVVMWADGRVNPKIGPSTRPLVLAEMTRLKAKCLAP*
Ga0070741_100358123	3300005529	Surface Soil	VLTIWGAISGFYGTRDWGPTDVCQARYMGDRFAFVQLRLHGRRHLAALHLYSARRGWVVMWADGHVNRKIGPATRPLVLAEVTRLKAKCLAP*
Ga0070741_100885012	3300005529	Surface Soil	VTALATALTIWGAITGFYGTRAWAPTDVCQARYMGDRFAFVQLRLHGRRHLAALHLYSARRGWVVMWADGNVNRKIGAATRPLVLAEVTRLKAQCLAP*
Ga0070684_1001557172	3300005535	Corn Rhizosphere	VTLLALAATIWAAVTGFYGTRNWTPTDVCKATYMGEDFALVQAKIRGARHIVALHFLNPKRGWVVMWADGRVNPRISPYTRSLVQAEVTRLKAKCLAP*
Ga0070664_1005701041	3300005564	Corn Rhizosphere	VADPRAERRASLAGADRAARMIVAVALAATIWGAVTGFYGTRHWRPVDVCKATYMSDRFAVVKATIHGTPHVAALHYLDRRTGWVVMWADGRVNRRIGPSTRPLVLAEVTRLKAKCLAP*
Ga0068856_1006922212	3300005614	Corn Rhizosphere	MIVAVALAVTIWGAMTGFYGTRQWRPVDVCKATFMGDQFAMVKATINGKPHVAALHYLDRRTGWVVMWADGTVTRRIGPSTRPLVLAEVTRLKAKCLAP*
Ga0068864_1020328872	3300005618	Switchgrass Rhizosphere	MIVAVVLAATLWGAVTGFYGTRHWQPVDVCKATYLGDRFAIVKATIRGTPHVAALHYLDRRTGWVVMWADGKVNRRIGPSTRPLVLAEVTRLKAKCLAP*
Ga0066903_1002277503	3300005764	Tropical Forest Soil	LTIRGAVTGFYGTKSWQPVKVCKASYLGDRFALVDARIAGRRHIAALHLLSAKRGWVVMWADGRVNQKINPRTAALVDAEVTRLKAKCLAP*
Ga0066903_1005194571	3300005764	Tropical Forest Soil	MIAAVALAVTIWGAVTGFYGTRQWRPVDVCKATYMGDRFAMVKATVRGTPHVVALHYLDRRTGWVVMWADGRVNRRIGPFTRPLVLAEVTRLKAKCLAP*
Ga0066903_1007539583	3300005764	Tropical Forest Soil	VIALVATATIWGAITGFYGTRHWRPIDVCQARYLGDRFAFVQARIAGRRHLAALHFFNARTGWVVMWADNHVNRKIGPSTRPLVLAEVTRLKAKCLAP*
Ga0066903_1051290302	3300005764	Tropical Forest Soil	VTATVAVALSIWGAVTGFYGTRHWQPVHVCQSRYMGDRFALVQARIHGREHIAALHLLAGRRGWVVMWADGKANPRIGPATRPLVLAEVTRLKAQCLAP*
Ga0066903_1060277101	3300005764	Tropical Forest Soil	VTTVAVAATIWAAVTGFFGTRAWHPVDVCRAGYMGDRFAFVQLRIHGRRHLAALHLYSAKRGWVVMWADGRVNWKIGPPTRPLVMAEVTRLEAQCLAP
Ga0081455_101197852	3300005937	Tabebuia Heterophylla Rhizosphere	VIAAVVAGLSIWGAVTGFYGTKSWRPVKVCQASYLGDRFALVDARIAGRRHIAALHRLSAKRGWVVMWADGKVNRRINPRTAALVDAEVTRLKAKCLAP*
Ga0066656_109633612	3300006034	Soil	VILLATVATIWRAVTGFYGTRHCEPIHICQSRYLGDRFALVQARIAGRRHIAALHLYNARTGWVVMWADGRVNRKIGPRIRPLVLAEVTRLKATCLAP*
Ga0075425_1000985143	3300006854	Populus Rhizosphere	MIVAALVATIWAAVTGFYGTRHWTPIDVCKGSYLQDRFALVQAQIHGRRHIAALHYYSAKRGWVVMWADGRVNPRVPGSIRPLVIAEVTRLKAKCLAP*
Ga0075434_1002701782	3300006871	Populus Rhizosphere	MIVAALVATIWAAVTGFYGTRHWTPIDVCKGSYLQDRFALVQAQIHGRRHIAALHYYSAKRGWVVMWADGRVNPRVPGSIRPLVLAEVTRLKAKCLAP*
Ga0068865_1011486892	3300006881	Miscanthus Rhizosphere	MIAAVAAALSIWGAITGFYGTKQWQPLKVCKAEYRGDRFAMVQATVKGRRRVAALHLFGSKRGWVVMWADGKVNPKIGPSTAPLVLAEVTRLKAKCLAP*
Ga0075435_1017044972	3300007076	Populus Rhizosphere	MIVAALVATIWAAVTGFYGTRHWTPIDVCKGSYLQDRFALVQAQIHGRRHIVALHYSAKRGWVVMWADGRVNPRVPGSIRPLVLAEVTRLKAKC
Ga0066710_1028975682	3300009012	Grasslands Soil	VILLATVATIWGAVTGFYGTRHWAPIHICQSRYLGDRFALVQARIAGRRHIAALHLYNARRGWMVMWADGQINSKVGPSTRPLVLAEVTRLKAKCLAP
Ga0099827_106267821	3300009090	Vadose Zone Soil	VRLLATLSLALVGATPATIWRAVTGFYGTKRWTAIDICQATYVSDRFALVQAKIAGRRHIVALHLFSARRGWVVMWADGRVNRRIGPATRPLVLAEVTRLKAKCLAP*
Ga0105245_102097272	3300009098	Miscanthus Rhizosphere	MIVAVALAVTIWGAMTGFYGTRQWRPVDVCKATCMGDQFGMVKATINGKPHVAALHYLDRRTGWVVMWADGTVNRRIGPSTRPLVLAEVTRLKAKCLAP*
Ga0105245_107307502	3300009098	Miscanthus Rhizosphere	VIAAFAAALSIWGAVTGFYGTKHWQPVKVCQATYRSDRFAMAQLTIAGRRHIAALHLLNAKRGWVVMWSDGRVNPRIGPSTAPLVLAEVTRLKAQCLAP*
Ga0105245_117654511	3300009098	Miscanthus Rhizosphere	VTGFYGTRHWRPVDVCKATYMSDHFAMVKATIGGRSHVAALHYFDRRTGWVVMWADGKVNRRIGLSTRPLVLAEVTRLKAKCLAP*
Ga0105243_102835022	3300009148	Miscanthus Rhizosphere	MIVVVALAATIWGAVTGFYGTRHWRPVDVCKATYMSDHFAMVKATIGGRSHVAALHYFDRRTGWVVMWADGKVNRRIGLSTRPLVLAEVTRLKAKCLAP*
Ga0075423_104976182	3300009162	Populus Rhizosphere	MIVAALVATIWAAVTGFYGTRHWTPIDVCKGSYLQDRFALVQAQIHGRRHIVALHYSAKRGWVVMWADGRVNPRVPGSIRPLVIAEVTRLKAKCLAP*
Ga0075423_120975002	3300009162	Populus Rhizosphere	WAAVTGFYSTRSWTPIDVCKADYRGDHFALVQARIRGARHIAALHFLNPRRGWVVMWADGKVNPKIGPHTRSLVLAEMTRLKAKCLAP*
Ga0105242_100847833	3300009176	Miscanthus Rhizosphere	MIVAVALAATIWGAVTGFYGTRHWRPVDVCKATYMSDRFAVVKATIRGTPNVAALHYLDRRTGWVVMWADGRVNRRIGPSTRPLVLAEVTRLKAKCLAP*
Ga0105248_129955401	3300009177	Switchgrass Rhizosphere	MIVAVALAVTIWGAMTGFYGTRQWQPVDVCKATYMGDQFAMVKATVSGKPHVAALHYLDRRTGWVVMWADGTVNRRIGPSTRPLVLAEVTRLKAKCLAP*
Ga0105237_107324062	3300009545	Corn Rhizosphere	VTLIALAATIWAAVTGFYGTRNWAPIDVCKATYMGEDFALVQAKIRGARHIAALHFLNPKRGWVVMWADGRVNPRISPYTRLLVQAEVTRLKAKCLAP*
Ga0105237_109398011	3300009545	Corn Rhizosphere	MIVVVALAATIWGAVTGFYGTRHWRPVDVCKATYMSDHFAMVKATIGGRSHVAALHYFDRRTGWVVMWADGKVNRRIGLSTRPLVL
Ga0105249_132949712	3300009553	Switchgrass Rhizosphere	VTAIAVAVTIWGAVTGFYGTRHWQPLDVCHARYMGDRFALVQARIRGRKHLAALHLYSGRTGWVVMWADGQVNRKIGPSARPLVLAELTRLKAKCLAP*
Ga0126382_118917102	3300010047	Tropical Forest Soil	MIVAALVATIWAAVTGFYGTRHWAPIDVCKASYISDRFALVQARIHGRRHIAALHYYSAKRGWVVMWADGRVNPKVPGSIRPLVLSEVTRLKAKCLAP*
Ga0126370_112215162	3300010358	Tropical Forest Soil	MIAAVALAVTIWGAVTGFYGTRQWRPVDVCKATYMGDRFAMVKATVRGTPHVVALHYLDRRTGWVVMWADGRVNRRIGPFTRPLVLAEVTG
Ga0126370_117450172	3300010358	Tropical Forest Soil	GAERVPALAAADGAARVTVLALVATIWAAVTGFYGTRNWTPIDVCKATYMGDNFALVQAKIHGVRHVAALHFLNAKRGWVVMWADGRVNPKIGPHTSSLVQAEVTRLKAKCLAP*
Ga0126377_120531611	3300010362	Tropical Forest Soil	AVTGFYGTRHWRPVDVCKATYSGDRFAMVKATIGGKPHVAALHYLDRRTGWVVMWADGRVNHRIGPSTRPLVLAEVTRLKAKCLAP*
Ga0138514_1000619322	3300011003	Soil	MRLLATLSLALVGATPATIWGAVTGFYGTKRWTAIDVCQATYMSDRFALVQAKIAGRRHIAALHLSNAKRGWVVMWADGNVNGKIGPSIRPLVVAEVTRLKAQCLAP*
Ga0137388_115275442	3300012189	Vadose Zone Soil	VRLLATLSLALVGATPATIWRAVTGFYGTKRWTALDVCQATYMRDRFALVQARVAGRHGVVALHLFNARRGWVVMWADGHVNRRIGPATRPLVLAEVTRLKAKCLAP*
Ga0137372_100539183	3300012350	Vadose Zone Soil	MKPKPLLLVVLALAVAPAAGANGATIWGAVTGFYGTKRWTALDVCQARYMGDRFALVQARIAGRRHIAALHLYNARRGWVVMWADGRVNRKIGPSIRPLVLAEVTRLKAKCLAP*
Ga0137372_101335743	3300012350	Vadose Zone Soil	KRLPALAGPDGGVGVIALAAAATIWGAVTGFFGTRHWQPLDVCQARYMGDRFALVQMRLHGHRHLAALHLYSAKTGWVVMWADGRVNRKIVPSIRPLVIGEVTRLKAQCLAP*
Ga0137369_102491562	3300012355	Vadose Zone Soil	VRFLATLSLALVGATPATIWGAVTGFYGTKRWTAIDVCQASYMSDRFALVHARIAGRRHIAALHFFNARRGWIVMWADGKINRKIGPASQPDGLRLSP*
Ga0137375_105859572	3300012360	Vadose Zone Soil	LPALAGADGGTGVRFLATLSLALVGATPATIWGAVTGFYGTKRWTAIDVCQASYMSDRFALVHARIAGRRHIAALHFFNARRGWIVMWADGKINRKIGPASQPDGLRLSP*
Ga0157298_102061141	3300012913	Soil	MIAAVAAALSIWGAITGFYGTKQWQPLKVCKAEYRGDRFAMVQATVKGHRRVAALHLFVAKRGWVVMWADGKVNPRIGPSTAPLVLAEVTRLKAKCLAP*
Ga0164298_108059221	3300012955	Soil	APLAGGAGVIAAVAVGLSIWGAVTGFYGTKHWELVKTCQATYMGDRFAMIEAKIQGRRHIAALHLLNAKRGWAVMWADGTVNRKIGPSTAPLVRAEVTRLKAQCLAP*
Ga0164301_110345342	3300012960	Soil	MIVAVALAATIWGAVTGFYGTRHWRPVDVCKASYMSDQFAVVKATIHGTPHVAALHYLDRRTGWVVMWADGGVNRRIGPSTRPLVLDEVTRLKAKCLAP*
Ga0164309_104456351	3300012984	Soil	MIVAVVLAATIWGAVTGFYGTRHWQPVDVCKATYLGDRFAIVKATIRGTPHVAALHYLDRRTGWVVMWADGKVNRQIGPSTRLLV
Ga0164308_101169102	3300012985	Soil	MIVAVVLAATIWGAVTGFYGTRNWQPVDVCKATYLGDRFAIVKATIRGTPHVAALHYLDRRTGWVVMWADGKVNRRIGPSTRPLVLAEVTRLKAKCLAP*
Ga0164307_105226342	3300012987	Soil	MIVAVVLAATIWGAVTGFYGTRNWQPVDVCKATHLGDRFAIVKATIRGTPHVAALHYLDRRTGWVVMWADGKVNRRIGASTRPLVLAEVTRLKAKCLAP*
Ga0164305_105490611	3300012989	Soil	IVAVVLAATIWGAVTGFYGTRHWQPVDVCKATYLGDRFAIVKATIRGTPHVAALHYLDRRTGWVVMWADGKVNRRIGPSTRPLVLAEVTRLKAKCLAP*
Ga0164305_118778501	3300012989	Soil	MIVAVALAATIWGAVTGFYGTRHWRPVDVCKATYMSDRFAVVKATIRGTPHVAALHYLDRRTGWVVMWADGRVNRRIGSATRPLVLSEVTRLKAKCLAP*
Ga0157378_112581161	3300013297	Miscanthus Rhizosphere	IVVVALGATLWGAVTGFYGTRHWRPVDVCKATYMSDRFAVVKATIHGTPHVAALHYLDRRTGWVVMWADGRVNRRIGPSTRPLVLAEVTRLKAKCLAP*
Ga0157378_128772501	3300013297	Miscanthus Rhizosphere	VIAAFAAALSIWGAVTGFYGTKHWQSVKVCQATYRSDRFAMAKLTIAGRRHIAALHLLNAKRGWVVMWSDGKVNPRIGPSTAPRVLAEVTRLKAQCLAP*
Ga0163162_129534272	3300013306	Switchgrass Rhizosphere	VVALAATIWGAVTGFYGTRPWRPVDVCKATYMRDHFAMVKATIGGRPHVAALHYFDRRTGWVVMWADGKVNRRIGPSTRPLVLAEVTRLKAKCLAP*
Ga0157372_122626731	3300013307	Corn Rhizosphere	MLVVVALAATIWGAVPGFYGTRHWRPVDVCKATYMSDHFAMVKATIGGRPHVAALHYFDRRTGWVVMWADGKVNRRIGPSTRPLVLAE
Ga0157372_131139142	3300013307	Corn Rhizosphere	AVVLAATIWGAVTGFYGTRHWQPVDVCKATYLGDRFAIVKATIRGTPHVAALHYLDRRTGWVVMWADGKVNRRIGPSTRPLVLAEVTRLKAKCLAP*
Ga0157375_105875282	3300013308	Miscanthus Rhizosphere	GAVTGFYGTRHWQPVDVCKATYLGDRFAIVKATIRGTPHVAALHYLDRRTGWVVMWADGKVNRRIGPSTRPLVLAEVTRLKAKCLAP*
Ga0120154_11475532	3300013501	Permafrost	LTALILAGATPQTIWKAVTGFYGTRAVTIADICQARYRSDRFALVQVRIAGRRHIAALHLLNAKTGWVVMWSDGKVNRKIGPSTRRLVVAEVTRLKAQCLAP*
Ga0120155_11595882	3300013768	Permafrost	VRLLASAALILAGATPQTIWKAVTGFYGTRAVTIADICQARSRSDRFALVQVRIAGRRHIAALQLLNARAGWVVTWSDGKVNPRIGPATRPLVLAEVIAAATAAGITVHRVS
Ga0163163_105290021	3300014325	Switchgrass Rhizosphere	AADGGARVTLLALAATIWAAVTGFYGTRNWAPIDVCKATYMGEDFALVQAKIRGARHIAALHFLNPKRGWVVMWADGRVNPRISPYTRLLVQAEVTRLKAKCLAP*
Ga0157377_110289332	3300014745	Miscanthus Rhizosphere	MIVAVALAATIRGAVTGFYGTRHWRPVDVCKATYMSDRFAVVKATIHGTPHVAALHYLDRRTGWVVMWADGRVNRRIGPSTRPLVLAEVTRLKAKCLAP*
Ga0157379_116911032	3300014968	Switchgrass Rhizosphere	MIAAVAAALSIWGAITGFYGTKQWQPLKVCKAEYRGDRFAMVQATVKGRRRVAALHLFGAKRGWVVMWADGRVNPRISPYTRLLVQAEVTRLKAKCLAP*
Ga0157376_125044351	3300014969	Miscanthus Rhizosphere	MIVAVALAATIWGAVTGFYGTRQWQPVDVCKATYMGDRFAMVKATVSGKPHVAALHYLDRRTGWVVMWADGTVNRRIGPSTRPLVLA*
Ga0132258_100281618	3300015371	Arabidopsis Rhizosphere	MIVAVALAATIWGAVTGFYGTRQWQPVDVCKATYMGDRFAMVKATVSGKPHVAALHYLDRRTGWVVMWADGTVNRRIGRSTRPLVLAEVTRLKAKCLAP*
Ga0132257_1039122492	3300015373	Arabidopsis Rhizosphere	VIALATVLTIWGAVTGFFGTRHWRPLDVCQARYMDDRFALVQLLLGGRKHIAALHLYSAKRGWVVMWADGHVNGKIGPATRPLVLAELTRLKAKCLAP*
Ga0132255_1026679572	3300015374	Arabidopsis Rhizosphere	VTLAVLAATIWAAVTGFYGTRSWTPIDVCKADYRGDHFALVQARIRGARHIAALHFLNPRRGWVVMWADGKVNPKIGPHTRSLVLAEMTRLKAKCLAP*
Ga0163161_112664102	3300017792	Switchgrass Rhizosphere	MIVAVALAATIWGAVTGFYGTRQWQPVDVCKATYMGDQFAMVKATVSGKPHVAALHYLDRRTGWVVMWADGTVNRRIGPSTRPLVLAEVTRLKAKCLAP
Ga0187788_104644592	3300018032	Tropical Peatland	MTLLALVVTIWGAVTGFYGTRHWTPIDVCKASYMGDRFALVQAGIRGRRHIAALHFLSARRGWVVMWADGRVNPKIGVSTRPLVLAEMTRLKAKCLAP
Ga0184624_104117352	3300018073	Groundwater Sediment	MIVAVVLAATIWGAVTGFYGTRNWRPVDVCKATYLGNHFAMVKATIGGRPHVVALHYLDRRTGWVVMWADGKIKRRIGPSTRPLVLDEVTRLKAKCLAP
Ga0066655_110323652	3300018431	Grasslands Soil	VIVAALVATIWGAVSGFYGTRHWTPIDVCKASYLQDQLALVQARIHGRRHIAALHYYGAKRGWVVMWADGHVNPKIGISVRPLVLAEVTRLKAKCLAP
Ga0173481_105718822	3300019356	Soil	MVVAALVATIWGAVTGFYGTRHWTPVKVCHATYMGDQFAMVKATIRGRTHVAALHHYSPKVGWIVMWADGKVNRTIGPSTRALVLAEVTRLKAQCLAP
Ga0247678_10315502	3300024325	Soil	VTVLALAATIWAAVTGFYGTRNWAPIDVCKATYMGEDFALVQAKIRGARHIAALHFLNPKRGWVVMWADGRVNPKISPYTRSLVQAEVTR
Ga0207653_104333032	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	VTLIALAATIWAAVTGFYGTRNWTPTDVCKATYMGEDFALVQAKIRGARHIAALHFLNPKRGWVVMWADGRVNPRISPYTRSLVQAEVTRLKAKCLAP
Ga0207647_103963162	3300025904	Corn Rhizosphere	MIVAVALAVTIWGAMTGFYGTRQWRPVDVCKATFMGDQFAMVKATVSGKPHVAALHYLDRRTGWVVMWADGTVNRRIGPSTKPIT
Ga0207707_100034937	3300025912	Corn Rhizosphere	MIVAVALAATIWGAVTGFYGTRHWRPVDVCKATYMSDRFAVVKATIHGTPHVAALHYLDRRTGWVVMWADGRVNRRIGPSTRPLVLAEVTRLKAKCLAP
Ga0207660_100102422	3300025917	Corn Rhizosphere	MIVAVALAATIWGAVTGFYGTRHWRPVDVCKATYMSDRFAVVKATIRGTPHVAALHYLDRRTGWVVMWADGRVNRRIGPSTRPLVLAEVTRLKAKCLAP
Ga0207687_106385832	3300025927	Miscanthus Rhizosphere	MIVVVALAATIWGAVTGFYGTRHWRPVDVCKATYMSDHFAMVKATIGGRSHVAALHYFDRRTGWVVMWADGKVNRRIGLSTRPLVLAEVTRLKAKCLAP
Ga0207706_105584952	3300025933	Corn Rhizosphere	MIVVVALAATIWGAVTGFYGTRHWRPVDVCKATYMRDHFAMVKATIGGRPHVAALHYFDRRTGWVVMWADGKVNRRIGPSTRPLVLAEVTRLKAKCLAP
Ga0207709_106578872	3300025935	Miscanthus Rhizosphere	MIVAVALAATIWGAVTGFYGTRHWRPVDVCKATYMSDHFAMVKATIGGRSHVAALHYFDRRTGWVVMWADGKVNRRIGLSTRPLVLAEVTRLKAKCLAP
Ga0207669_110783771	3300025937	Miscanthus Rhizosphere	MAATIWGAVTGFYGTRHWRPVDVCKATYMSDRFAVVKATIHGTPHVAALHYLDRRTGWVVMWADGRVNRRIGPSTRPLVLAEVTRLKAKCLAP
Ga0207711_119439151	3300025941	Switchgrass Rhizosphere	MIVAVALAATIWGAVTGFYGTRHWRPVDVCKATYMSDRFAVVKATIRGTPHVAALHYLDRRTGWVVMWADGRVNRRIGPS
Ga0207689_112752571	3300025942	Miscanthus Rhizosphere	DPRAERRASLAGADRAARMIVAVALAATIWGAVTGFYGTRHWRPVDVCKATYMSDRFAVVKATIHGTPHVAALHYLDRRTGWVVMWADGRVNRRIGPSTRPLVLAEVTRLKAKCLAP
Ga0207702_101949992	3300026078	Corn Rhizosphere	MIVAVVLAATIWGAVTGFYGTRHWQPVDVCKATYLGDRFAIVKATIRGTPHVAALHYLDRRTGWVVMWADGKVNRRIGPSTRPLVLAEVTRLKAKCLAP
Ga0207702_113038052	3300026078	Corn Rhizosphere	ALAATIWGAVTGFYGTRHWRPVDVCKATYMSDRFAVVKATIRGTPHVAALHYLDRRTGWVVMWADGRVNRRIGPSTRPLVLAEVTRLKAKCLAP
Ga0207702_122525391	3300026078	Corn Rhizosphere	MIVAVALAVTIWGAMTGFYGTRQWRPVDVCKATFMGDQFAMVKATINGKPHVAALHYLDRRTGWVVMWADGTVTRRIGPSTRPLVLAEVTRLTAKCLAP
Ga0207675_1004837781	3300026118	Switchgrass Rhizosphere	MIVAVALAVTIWGAMTGFYGTRQWRPVDVCKATFMGDQFAMVKATINGKPHVAALHYLDRRTGWVVMWADGTVNRRIGPSTRPLVLAEVTRLKAKCLAP
Ga0207683_100122476	3300026121	Miscanthus Rhizosphere	MIVAVALAATIWGAVTGFYGTRHWRPVDVCKATYMSDRFAVVKATIHGTPHVAALHYLDRRTGWVVMWADGRGNRRIGPSTRPLVLAEVTRLKAKCLAP
Ga0207698_110422522	3300026142	Corn Rhizosphere	MIVVVALAATIWGAVTGFYGTRHWRPVDVCKATYMSDHFAMVKATIGGRPHVAALHYFDRRTGWVVMWADGKVNRRIGLSTRPLVLAEVTRLKAKCLAP
Ga0209474_106981961	3300026550	Soil	VMLLAVTTATIWGAITGFYGTRHWQPLDVCQARYRGDRFALVQARIHGRRHLAALHLYSAKTGWVVMWADGRVNRKIGPSTAPLVLAEVTRLKAQCLAP
Ga0265318_101034822	3300028577	Rhizosphere	MPLVLATALSIWGAVTGFYGTRQWAPLDVCQARYMGDRFALVQASIHGRRHIAALHLFSKKTGWVVMWADGRVGPKIGLSTRPLVLAEVTRLKAKCLAP
Ga0307299_103731632	3300028793	Soil	MIVAVVLAATIWGAVTGFYGTRNWRPVDVCKATYLGNHFAMVKATIGGRPHVVALHYLDRRTGWVVMWADGKINRRIGPSTRPLVLVEVTRLKAKCLAP
Ga0307305_103683002	3300028807	Soil	MIVAVVLAATIWGAVTGFYGTRNWRPVDVCKATYLGNHFAMVKATIGGRPHVVALHYLDRRTGWVVMWADGKINRRIGPSTRPLVLVEVTRLKAKCLAPGWSAPRVI
Ga0307312_108679741	3300028828	Soil	MKLLAAVALVLTGAAPQTIWKAVTGFYGTRAVMFADICQARYFSERFALVQVWIAGRRHIAALHLLNARTGWVVMWSDGKVNRKIGPSTQPVVLAEVTRLKAKCLAP
Ga0247826_111313521	3300030336	Soil	AVTIWGAVTGFYGTRHWRPVDVCKATYMGDHFAMVKATIGGRSHVAALHYFDRRTGWVVMWADGKVNRRISPSTRPLVLAEVTRLKAKCLAP
Ga0307468_1003754502	3300031740	Hardwood Forest Soil	MIVVVALAATIWGAVTGFYGTRHWRPVDVCKATYMSDHFAMVKATIGGRSHVAALHYLDRRTGWVVMWADGKVNRRIGLSTRPLVLAEVTRLKAKCLAP
Ga0310897_105903141	3300032003	Soil	MIVAVALAATIWGAVTGFYGTRQWQPVDVCKATYMGDRFAMVKATVSGKTHVAALHYLDRRTGWVVMWADGTVNRRIGPSTRPLVLAEVTRLKAKCLAP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F060668

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences