NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F060663

Metagenome / Metatranscriptome Family F060663

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F060663
Family Type Metagenome / Metatranscriptome
Number of Sequences 132
Average Sequence Length 59 residues
Representative Sequence QIMITIDGPNFQDFQEAEVARLPEEGEPIETKYGTCVVTSVEALPASEHFAGKVICRLS
Number of Associated Samples 112
Number of Associated Scaffolds 132

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 50.00 %
% of genes near scaffold ends (potentially truncated) 25.00 %
% of genes from short scaffolds (< 2000 bps) 69.70 %
Associated GOLD sequencing projects 106
AlphaFold2 3D model prediction Yes
3D model pTM-score0.77

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (83.333 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(27.273 % of family members)
Environment Ontology (ENVO) Unclassified
(27.273 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(52.273 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 40.23%    Coil/Unstructured: 59.77%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.77
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
b.53.1.1: Ribosomal protein L25-liked1feua_1feu0.63644
d.113.1.2: IPP isomerase-liked1hzta11hzt0.62777
d.113.1.1: MutT-liked1jkna11jkn0.62346
b.168.1.1: HisI-liked1zpsa11zps0.61944
d.113.1.1: MutT-liked1sjya_1sjy0.61029

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 132 Family Scaffolds
PF00282Pyridoxal_deC 15.15
PF00999Na_H_Exchanger 9.09
PF03631Virul_fac_BrkB 4.55
PF00884Sulfatase 3.03
PF13230GATase_4 3.03
PF00654Voltage_CLC 2.27
PF13396PLDc_N 2.27
PF13522GATase_6 2.27
PF07690MFS_1 1.52
PF03706LPG_synthase_TM 1.52
PF03780Asp23 0.76
PF06271RDD 0.76
PF11139SfLAP 0.76
PF07885Ion_trans_2 0.76

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 132 Family Scaffolds
COG0076Glutamate or tyrosine decarboxylase or a related PLP-dependent proteinAmino acid transport and metabolism [E] 15.15
COG0025NhaP-type Na+/H+ or K+/H+ antiporterInorganic ion transport and metabolism [P] 9.09
COG0475Kef-type K+ transport system, membrane component KefBInorganic ion transport and metabolism [P] 9.09
COG3004Na+/H+ antiporter NhaAEnergy production and conversion [C] 9.09
COG3263NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domainsEnergy production and conversion [C] 9.09
COG4651Predicted Kef-type K+ transport protein, K+/H+ antiporter domainInorganic ion transport and metabolism [P] 9.09
COG1295Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)Function unknown [S] 4.55
COG0038H+/Cl- antiporter ClcAInorganic ion transport and metabolism [P] 2.27
COG0392Predicted membrane flippase AglD2/YbhN, UPF0104 familyCell wall/membrane/envelope biogenesis [M] 1.52
COG1302Uncharacterized conserved protein YloU, alkaline shock protein (Asp23) familyFunction unknown [S] 0.76
COG1714Uncharacterized membrane protein YckC, RDD familyFunction unknown [S] 0.76

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms83.33 %
UnclassifiedrootN/A16.67 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459005|F1BAP7Q01BH01OAll Organisms → cellular organisms → Bacteria → Terrabacteria group533Open in IMG/M
2199352025|deepsgr__Contig_74849All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1116Open in IMG/M
2228664021|ICCgaii200_c0793767All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria618Open in IMG/M
3300000890|JGI11643J12802_10118600All Organisms → cellular organisms → Bacteria953Open in IMG/M
3300002568|C688J35102_119368545All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria682Open in IMG/M
3300002911|JGI25390J43892_10003137All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3593Open in IMG/M
3300004114|Ga0062593_103304962All Organisms → cellular organisms → Bacteria → Terrabacteria group517Open in IMG/M
3300004153|Ga0063455_100334269All Organisms → cellular organisms → Bacteria → Terrabacteria group853Open in IMG/M
3300004153|Ga0063455_100583251All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium722Open in IMG/M
3300005172|Ga0066683_10050815All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2444Open in IMG/M
3300005175|Ga0066673_10655613All Organisms → cellular organisms → Bacteria → Terrabacteria group607Open in IMG/M
3300005177|Ga0066690_10256637All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1174Open in IMG/M
3300005186|Ga0066676_10100722All Organisms → cellular organisms → Bacteria1752Open in IMG/M
3300005187|Ga0066675_10901135All Organisms → cellular organisms → Bacteria → Terrabacteria group668Open in IMG/M
3300005294|Ga0065705_10123236All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2831Open in IMG/M
3300005434|Ga0070709_10351958All Organisms → cellular organisms → Bacteria1088Open in IMG/M
3300005434|Ga0070709_11465917All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria553Open in IMG/M
3300005435|Ga0070714_100393422All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1309Open in IMG/M
3300005444|Ga0070694_100229253All Organisms → cellular organisms → Bacteria1397Open in IMG/M
3300005445|Ga0070708_100574917All Organisms → cellular organisms → Bacteria → Terrabacteria group1062Open in IMG/M
3300005552|Ga0066701_10212510All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1189Open in IMG/M
3300005553|Ga0066695_10570483All Organisms → cellular organisms → Bacteria684Open in IMG/M
3300005554|Ga0066661_10109691All Organisms → cellular organisms → Bacteria1659Open in IMG/M
3300005555|Ga0066692_10173699All Organisms → cellular organisms → Bacteria1336Open in IMG/M
3300005561|Ga0066699_10448159All Organisms → cellular organisms → Bacteria → Terrabacteria group924Open in IMG/M
3300009137|Ga0066709_102724136All Organisms → cellular organisms → Bacteria → Terrabacteria group658Open in IMG/M
3300009137|Ga0066709_102768175All Organisms → cellular organisms → Bacteria → Terrabacteria group652Open in IMG/M
3300009789|Ga0126307_10005293All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia9013Open in IMG/M
3300009840|Ga0126313_10358027All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus1151Open in IMG/M
3300010040|Ga0126308_10002759All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia7625Open in IMG/M
3300010040|Ga0126308_10282079All Organisms → cellular organisms → Bacteria1088Open in IMG/M
3300010041|Ga0126312_10752788Not Available705Open in IMG/M
3300010044|Ga0126310_10200370All Organisms → cellular organisms → Bacteria → Terrabacteria group1312Open in IMG/M
3300012198|Ga0137364_10114148All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1918Open in IMG/M
3300012198|Ga0137364_10131331All Organisms → cellular organisms → Bacteria1795Open in IMG/M
3300012199|Ga0137383_10039362All Organisms → cellular organisms → Bacteria3351Open in IMG/M
3300012201|Ga0137365_10212635All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1444Open in IMG/M
3300012202|Ga0137363_10855437All Organisms → cellular organisms → Bacteria → Terrabacteria group772Open in IMG/M
3300012204|Ga0137374_10002802All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria20431Open in IMG/M
3300012205|Ga0137362_10313428All Organisms → cellular organisms → Bacteria1358Open in IMG/M
3300012206|Ga0137380_10501739All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1069Open in IMG/M
3300012207|Ga0137381_10019712All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria5323Open in IMG/M
3300012208|Ga0137376_10924530All Organisms → cellular organisms → Bacteria → Terrabacteria group749Open in IMG/M
3300012211|Ga0137377_10041162All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4234Open in IMG/M
3300012211|Ga0137377_11621623All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria570Open in IMG/M
3300012349|Ga0137387_10187595All Organisms → cellular organisms → Bacteria1482Open in IMG/M
3300012350|Ga0137372_10681490All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter746Open in IMG/M
3300012356|Ga0137371_10570356All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria871Open in IMG/M
3300012357|Ga0137384_10049999All Organisms → cellular organisms → Bacteria3458Open in IMG/M
3300012359|Ga0137385_10063599All Organisms → cellular organisms → Bacteria3285Open in IMG/M
3300012362|Ga0137361_10891124All Organisms → cellular organisms → Bacteria → Terrabacteria group807Open in IMG/M
3300012398|Ga0134051_1113272All Organisms → cellular organisms → Bacteria → Terrabacteria group506Open in IMG/M
3300012930|Ga0137407_10015023All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales5639Open in IMG/M
3300012930|Ga0137407_11981408All Organisms → cellular organisms → Bacteria → Terrabacteria group556Open in IMG/M
3300012941|Ga0162652_100057538All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria643Open in IMG/M
3300012951|Ga0164300_10234522All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria921Open in IMG/M
3300012951|Ga0164300_10364245Not Available781Open in IMG/M
3300012955|Ga0164298_10137029All Organisms → cellular organisms → Bacteria → Terrabacteria group1355Open in IMG/M
3300012957|Ga0164303_10292084All Organisms → cellular organisms → Bacteria → Terrabacteria group956Open in IMG/M
3300012960|Ga0164301_10331554All Organisms → cellular organisms → Bacteria1038Open in IMG/M
3300012977|Ga0134087_10355167All Organisms → cellular organisms → Bacteria702Open in IMG/M
3300012984|Ga0164309_10492658All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria936Open in IMG/M
3300012989|Ga0164305_11586003All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria584Open in IMG/M
3300014157|Ga0134078_10306570All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria685Open in IMG/M
3300015358|Ga0134089_10017426All Organisms → cellular organisms → Bacteria2409Open in IMG/M
3300017997|Ga0184610_1147419Not Available771Open in IMG/M
3300018027|Ga0184605_10030345All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2225Open in IMG/M
3300018027|Ga0184605_10036864All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2040Open in IMG/M
3300018027|Ga0184605_10108239Not Available1231Open in IMG/M
3300018061|Ga0184619_10036803All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2087Open in IMG/M
3300018061|Ga0184619_10379864All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. BK340642Open in IMG/M
3300018076|Ga0184609_10213381All Organisms → cellular organisms → Bacteria → Terrabacteria group900Open in IMG/M
3300018433|Ga0066667_11675328All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria570Open in IMG/M
3300018465|Ga0190269_10089431All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1488Open in IMG/M
3300018482|Ga0066669_12135839All Organisms → cellular organisms → Bacteria → Terrabacteria group529Open in IMG/M
3300019255|Ga0184643_1222936All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria507Open in IMG/M
3300019279|Ga0184642_1612751All Organisms → cellular organisms → Bacteria665Open in IMG/M
3300019279|Ga0184642_1663734All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus633Open in IMG/M
3300019789|Ga0137408_1202857All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales7077Open in IMG/M
3300019882|Ga0193713_1105509All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria783Open in IMG/M
3300019886|Ga0193727_1000223All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria20385Open in IMG/M
3300019887|Ga0193729_1002124All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria9945Open in IMG/M
3300020059|Ga0193745_1018009All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1536Open in IMG/M
3300021078|Ga0210381_10036573All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1411Open in IMG/M
3300024288|Ga0179589_10068061All Organisms → cellular organisms → Bacteria1388Open in IMG/M
3300024288|Ga0179589_10152110All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria988Open in IMG/M
3300025906|Ga0207699_10200976All Organisms → cellular organisms → Bacteria → Terrabacteria group1350Open in IMG/M
3300025916|Ga0207663_11397289All Organisms → cellular organisms → Bacteria → Terrabacteria group564Open in IMG/M
3300026078|Ga0207702_11135825All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria775Open in IMG/M
3300026324|Ga0209470_1059934All Organisms → cellular organisms → Bacteria1803Open in IMG/M
3300026538|Ga0209056_10138726All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1890Open in IMG/M
3300028713|Ga0307303_10023218All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1201Open in IMG/M
3300028715|Ga0307313_10001772All Organisms → cellular organisms → Bacteria4682Open in IMG/M
3300028715|Ga0307313_10250480All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria551Open in IMG/M
3300028719|Ga0307301_10124939All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium822Open in IMG/M
3300028719|Ga0307301_10134153All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria793Open in IMG/M
3300028722|Ga0307319_10000574All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria11290Open in IMG/M
3300028722|Ga0307319_10250375All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria583Open in IMG/M
3300028793|Ga0307299_10003655All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria5277Open in IMG/M
3300028799|Ga0307284_10295227All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14650Open in IMG/M
3300028810|Ga0307294_10275295All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium604Open in IMG/M
3300028814|Ga0307302_10257963Not Available854Open in IMG/M
3300028824|Ga0307310_10017236All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2806Open in IMG/M
3300028824|Ga0307310_10543443All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria588Open in IMG/M
3300028875|Ga0307289_10183085All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium862Open in IMG/M
3300028878|Ga0307278_10324849All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria679Open in IMG/M
3300028881|Ga0307277_10006943All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4352Open in IMG/M
3300028885|Ga0307304_10107211All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1123Open in IMG/M
3300028885|Ga0307304_10518593All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria547Open in IMG/M
3300030969|Ga0075394_10832293All Organisms → cellular organisms → Bacteria → Terrabacteria group556Open in IMG/M
3300031058|Ga0308189_10237258All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus681Open in IMG/M
3300031099|Ga0308181_1102614Not Available620Open in IMG/M
3300031152|Ga0307501_10219870All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria552Open in IMG/M
3300031421|Ga0308194_10126812All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia764Open in IMG/M
3300031740|Ga0307468_101890710All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp.568Open in IMG/M
3300032180|Ga0307471_102518707All Organisms → cellular organisms → Bacteria → Terrabacteria group651Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil27.27%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil17.42%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil9.85%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil6.06%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment5.30%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil5.30%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.55%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil3.79%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment3.03%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil3.03%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.52%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.52%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.76%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.76%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.76%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.76%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil0.76%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.76%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.76%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.76%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.76%
SoilEnvironmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil0.76%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.76%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.76%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.76%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.76%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.76%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459005Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cmEnvironmentalOpen in IMG/M
2199352025Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOILEnvironmentalOpen in IMG/M
2228664021Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000890Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300001686Grasslands soil microbial communities from Hopland, California, USAEnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300002911Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cmEnvironmentalOpen in IMG/M
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004153Grasslands soil microbial communities from Hopland, California, USA (version 2)EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009789Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28EnvironmentalOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010039Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56EnvironmentalOpen in IMG/M
3300010040Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55EnvironmentalOpen in IMG/M
3300010041Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104AEnvironmentalOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012398Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012941Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t4i015EnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300014157Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300015358Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300017997Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coexEnvironmentalOpen in IMG/M
3300018027Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coexEnvironmentalOpen in IMG/M
3300018061Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1EnvironmentalOpen in IMG/M
3300018076Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coexEnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018465Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 ISEnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019255Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019279Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019789Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300019882Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2EnvironmentalOpen in IMG/M
3300019886Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2EnvironmentalOpen in IMG/M
3300019887Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2EnvironmentalOpen in IMG/M
3300020059Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a2EnvironmentalOpen in IMG/M
3300021078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redoEnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300024288Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungalEnvironmentalOpen in IMG/M
3300025906Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026324Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)EnvironmentalOpen in IMG/M
3300026538Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)EnvironmentalOpen in IMG/M
3300027821Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300028713Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184EnvironmentalOpen in IMG/M
3300028715Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203EnvironmentalOpen in IMG/M
3300028719Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182EnvironmentalOpen in IMG/M
3300028722Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368EnvironmentalOpen in IMG/M
3300028782Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193EnvironmentalOpen in IMG/M
3300028793Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159EnvironmentalOpen in IMG/M
3300028799Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123EnvironmentalOpen in IMG/M
3300028810Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151EnvironmentalOpen in IMG/M
3300028811Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149EnvironmentalOpen in IMG/M
3300028814Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183EnvironmentalOpen in IMG/M
3300028824Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197EnvironmentalOpen in IMG/M
3300028875Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143EnvironmentalOpen in IMG/M
3300028878Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117EnvironmentalOpen in IMG/M
3300028881Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116EnvironmentalOpen in IMG/M
3300028885Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185EnvironmentalOpen in IMG/M
3300030336Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1EnvironmentalOpen in IMG/M
3300030969Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 Emin (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031058Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031099Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_152 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031152Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_SEnvironmentalOpen in IMG/M
3300031421Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
E41_051327902170459005Grass SoilMDQIMITIDGPNFQDFQEAEVARLPEQGEPIETKYGTCVVTSVEALPASEHFAGKVTCRL
deepsgr_010394302199352025SoilVKHVVITIRGHGFQDVAEAEVPRLPEVGEAIQTEYGTCVVSEVDPIPDGEPYDGKVVCRL
ICCgaii200_079376722228664021SoilMDRILITIEGPGFQDREEAEVLGLPEEGEMIDTKYGPCVVTAVEPLPDSDKFSGKVACRM
JGI11643J12802_1011860023300000890SoilMDRILITIEGPGFQDREEAEVLGLPEEGEMIDTKYGPCVVTAVEPLPDSDKFSGKVAC
C688J18823_1000279323300001686SoilVQRIIVTIQGPGFQDFEEMEVARLPEEGELISTKYDNCVVMSAELTPDSDFFGKVLCRLP
C688J35102_11861116213300002568SoilQRIIVTIQGPGFQDFEEMEVARLPEEGELISTKYDNCVVMSAELTPDSDFFGKVLCRLP*
C688J35102_11936854513300002568SoilMAMDQIMITIDGPNFQDFQEAEVMGLPEEGEPIETKYGTCVVTSVEALPDSEHFAGKVFCRLS*
JGI25390J43892_1000313753300002911Grasslands SoilENARTYVDQIMITIDGPNFQDFQEAEVPRLPEEGEPIETKYGTCVVTSVEALPDSEHFAGKVICRMA*
Ga0063454_10181810123300004081SoilVTIQGPGFQDFEEMEVARLPEEGELISTKYDNCVVVSAELTPDSDFFGKVLCRLP*
Ga0063454_10181810323300004081SoilVTIQGPGFQDFEEMEVARLPEEGELISTKYDNCVVMSAELTPDSDFFGKVLCRLP*
Ga0062593_10330496213300004114SoilMITIDGPNFQDFQEAEVARLPEEGEPIETKYGTCVVTSVEALPASEHFAGKVTCRLS*
Ga0063455_10033426913300004153SoilNFQDFQEAEVMGLPEEGEPIETKYGTCVVTSVEALPDSEHFAGKVFCRLS*
Ga0063455_10058325113300004153SoilVDRIIITIEGPNFQDREEAEVLGLPEEGEMINPNYGPCVVTGVEPLPDSDKFSGKVACRLP*
Ga0062595_10144280913300004479SoilVERVIVTIQGPGFQDFEELEVARLPEEGELISTKYDKCIVTSVELTPDSDFLGKVVCRLP
Ga0066683_1005081523300005172SoilMITIDGPNFQDFQEAEVPRLPEEGEPIETKYGTCVVTSVEALPDSEHFAGKVICRMA*
Ga0066673_1065561323300005175SoilARGAVEDRDGEAVTAVDQIMITIDGPNLQDFQEAEVMGLPEEGEPIETKYGTCVVTSVEALPASEHFAGRVICRLS*
Ga0066690_1025663723300005177SoilMITIDGPNFQDFQEAEVPRLPEEGEPIETKYGTCVVTSVEALPASDHFAGKVICRMS*
Ga0066676_1010072223300005186SoilMITIDGPNFQDFQEAEVPRLPEEGEPIETKYGTCVVTSVEALPDSEHFAGKVFCRLS*
Ga0066675_1090113523300005187SoilMITIDGPNFQDFQEAEVPRLPEEGEPIETKYGTCVVTSVEALPASDHFAGKVICRLS*
Ga0065705_1012323643300005294Switchgrass RhizosphereVDRIIVTIEGPNFQDREETEVLSLPEEGEMINTKYGPCVVTGVEPLPDSDKFSGKVACRLP*
Ga0070670_10098269123300005331Switchgrass RhizosphereVERILVTIQGPGFQDFQEMEVLRLPEVGELISTKYDNCIVVSVELTPDRDSLGNVVCRLP
Ga0070709_1035195823300005434Corn, Switchgrass And Miscanthus RhizosphereMITIDGPNFQDFQEAEVARLPEEGEPIETKYGTCVVTAVEALPASDHFAGKVTCRLS*
Ga0070709_1146591723300005434Corn, Switchgrass And Miscanthus RhizosphereMITIDGPNFQDFQEAEVARLPEEGEPIETKYGTCVVTSVEALPASEHFAGKVICRLS*
Ga0070714_10039342233300005435Agricultural SoilQIMITIDGPNFQDFQEAEVARLPEEGEPIETKYGTCVVTSVEALPASEHFAGKVICRLS*
Ga0070694_10022925323300005444Corn, Switchgrass And Miscanthus RhizosphereMDQIMITIDGPNFQDFQEAEVARLPEEGEPIETKYGTCVVTSVEALPASEHFAGKVICRLS*
Ga0070708_10057491713300005445Corn, Switchgrass And Miscanthus RhizospherePNFQDFQEAEVARLPEEGEPIETKYGTCVVTSVEALPASEHFAGKVTCRLS*
Ga0070684_10112584123300005535Corn RhizosphereRVKRILVTIQGPGFQDFEELEVVRLPEEGELISTKYDTCIVTSVEETPDSDFLGKVVCRMTG*
Ga0066701_1021251023300005552SoilMITIDGPNFQDFQEAEVARLPEEGEPIETKYGTCVVTAVEELPASEHFAGRVTCRLS*
Ga0066695_1057048323300005553SoilVNHIMVTIDGPNFQDFEDTELMRLPEEGEAIETKYGTCVVTRVEPDPPGEHYDGKVFCRLP*
Ga0066661_1010969133300005554SoilMITIDGPNFQDFQEAEVVRLPEEGEPIETKYGTCVVTAVEALPASEHFAGKVTCRLS*
Ga0066692_1017369923300005555SoilMITIDGPNFQDFQEAEVARLPEEGEPIETKYGTCVVTAVEALPASEHFAGKVTCRLS*
Ga0066699_1044815913300005561SoilTIDGPNFQDFQEAEVPRLPEEGEPIETKYGTCVVTSVEALPASDHFAGKVICRMS*
Ga0068858_10071962613300005842Switchgrass RhizosphereVTIQGPGFQDFQEMEVLRLPVVGELISTKYDNCIVVSVELTPDRDFLGNVVCRLP*
Ga0075425_10249031023300006854Populus RhizosphereMERIIVTIQGPGFQDFQEMEVVRLPEEGELISTKYDNCVVTSVELTPDSDFLGKVVCRLP
Ga0066709_10272413623300009137Grasslands SoilVDQIMITIDGPNFQDFQEAEVPRLPEEGEPIETKYGTCVVTSVEALPASDHFAGKVICRMS*
Ga0066709_10276817523300009137Grasslands SoilMDQIMITIDGPNFQDFQEAEVARLPEEGEPIETKYGTCVVTLVEALPASEHFAGKVTCRLSS*
Ga0126307_1000529363300009789Serpentine SoilMDRILVTIDGPNFQEVEEAEVLRLPEEGELIDTKYGTCVVTGVEPLPDSDQFSGRVLCRMP*
Ga0126313_1035802733300009840Serpentine SoilMVTIDGPNFQDFEETEVLRLPEEGELIDTKYGTCVVTGVEPLPASDFLGRVVCRMP*
Ga0126309_1033269623300010039Serpentine SoilMERIIVTIEGPGFQDFEEMEVARLPEEGELISTKYDNCVVTSAELTPDSEFFGRVACRMP
Ga0126308_1000275953300010040Serpentine SoilVDRIIVTIEGPNFQDREEAEVLGLPEEGEMIDTKYGPCIVTGVEPLPDSDKFSGKVACRMP*
Ga0126308_1028207923300010040Serpentine SoilVDRIIVTIDGPNFQDVEETEVLRLPEEGELIDTKYGSCVVTGVEPLPDSDKFSGKVVCRML*
Ga0126312_1075278823300010041Serpentine SoilVNHIIITIDGPNFQDLEEAEVLRLPEEGEAIETKYGTCLVTGVEPDPAGEHYDGKVFCRLP*
Ga0126310_1020037023300010044Serpentine SoilTAVDQIMITIDGPNFQDFQEAEVMGLPEEGEPIETKYGTCVVTSVETLPDSEHFAGKVFCRLS*
Ga0137364_1011414823300012198Vadose Zone SoilMITIDGPNFQDFQEAEVMGLPEEGEPIETKYGTCVVTSVEALPASEHFAGRVICRLS*
Ga0137364_1013133113300012198Vadose Zone SoilVNQIMITIDGPNFQDFQEAEVPRLPEEGEPIETKYGTCVVTSVEALPDSEHFAGKV
Ga0137383_1003936213300012199Vadose Zone SoilVDQIMITIDGPNFQDFQEAEVPRLPEEGEPIETKYGTCVVTSVEALPDSEHFAGKV
Ga0137365_1021263523300012201Vadose Zone SoilVDQIMITIDGPNFQDFEEAEVARLPEEGEPIETKYGTCVVTSVEELPATEHFAGKVVCRFS*
Ga0137363_1085543723300012202Vadose Zone SoilFQDFQEAEVARLPEEGEPIETKYGTCVVTAVEALPASEHFAGKVTCRLS*
Ga0137374_10002802123300012204Vadose Zone SoilVKHIIITVNGPNFEDVEEAEVLRLPEEGEAIETKYGTCVVTHVEAVPASDHYDGKVVCRLP*
Ga0137362_1031342833300012205Vadose Zone SoilVDQIMITIDGPNFQDFQEAEVARLPEEGEPIETKYGTCVVTAVEALPASEHFAGKVTCRLS*
Ga0137380_1050173923300012206Vadose Zone SoilVNQIMITIDGPNFQDFQEAEVPRLPEEGEPIETKYGTCVVTSVEALPDSEHFAGKVFCRLS*
Ga0137381_1001971233300012207Vadose Zone SoilVDQIMITIDGPNFQDFQEAEVPRLPEEGEPIETKYGTCVVTSVEALPDSEHFAGKVFCRLS*
Ga0137376_1092453023300012208Vadose Zone SoilNFQDFQEAEVPRLPEEGEPIETKYGTCIVTSVEALPASEHFAGRVICRLS*
Ga0137377_1004116243300012211Vadose Zone SoilVDQIMITIDGPNFQDFQEAEVARLPEEGEPIETKYGTCVVTAVEELPASEHFAGKVTCRLS*
Ga0137377_1162162323300012211Vadose Zone SoilVDQIMITIDGPNFQDFQEAEVARLPAEGEPIETKYGTCVVTSVEALPASEHFAGKVICRLS*
Ga0150985_10314890323300012212Avena Fatua RhizosphereVQRIIVTIQGPGFQDFEEMEVARLPEEGELISTKYDNCVVVSAELTPDSDFFGKVLCRLP
Ga0137387_1018759513300012349Vadose Zone SoilVDQIMITIDGPNFQDFQEAEVPRLPEEGEPIETKYGTCVVTSVEALPDSEHF
Ga0137372_1068149023300012350Vadose Zone SoilMEPIMITIEGANFQDSQEAEVARLPDVGEPIETKYGTCIVTSVEALPANDHFAGKVVCRVF*
Ga0137371_1057035623300012356Vadose Zone SoilVDQIMITIDGPNFQDFQEAEVLRLPEEGEPIETKYGTCLVTSVESLPASEHFAGKVICRLS*
Ga0137384_1004999943300012357Vadose Zone SoilMITIDGPNFQDFQEAEVPRLPEEGEPIETKYGTCVVTSVEALPDSEHFAGKV
Ga0137385_1006359943300012359Vadose Zone SoilMITIDGPNFQDFQEAEVPRLPEEGEPIETKYGTCVVTSVEALPDSEHFAG
Ga0137361_1089112423300012362Vadose Zone SoilDGPNFQDFQEAEVARLPEEGEPIETKYGTCVVTAVEALPASEHFAGKVTCRLS*
Ga0134051_111327223300012398Grasslands SoilMITIDGPNFQDFQEAEVMGLPEEGEPIETKYGTCVVTSVEALPDSEHFAGKVFCRLS*
Ga0137407_1001502333300012930Vadose Zone SoilVDQIMITIDGPNFQDFQEAEVPRLPEEGEPIETKYGTCVVTSVEALPDSEHFAGKVICRMA*
Ga0137407_1198140823300012930Vadose Zone SoilYVDQIMITIDGPNFQDFQEAEVARLPEEGEPIETKYGTCVVTAVEALPASEHFAGKVTCRLS*
Ga0162652_10005753823300012941SoilVNHIIITIDGPNFQDLEEAEVLRLPEEGEAIETKYGTCLVTEVEPDPAGEHYDGKVFCRLP*
Ga0164300_1023452223300012951SoilMKHVVITIQGHGFQDVAEAEVLRLPEVGEAIETEYGTCVVSEVDPIPDGGPYDGKVVCRLP*
Ga0164300_1036424523300012951SoilVDRIIITIEGPNFQDREEAEVLGLPEEGEMINTNYGPCVVTGVEPLPDSDKFSGKVACRLP*
Ga0164298_1013702923300012955SoilVDQIMITIDGPNFQDFQEAEVARLPEEGEPIETKYGTCVVTSVEALPASGHFAGKVTCRLS*
Ga0164303_1029208423300012957SoilMCGEAQILLRVDQIMITIEGPNFQDFQEAEVARLPEEGEPIETKYGTCVVTSVEALPASEHFAGKVICRLS*
Ga0164301_1033155423300012960SoilVDQIMITIDGPNFQDFQEAEVARLPEEGEPIETKYGTCVVTSVEALPASEHFAGKVICRLS*
Ga0134087_1035516723300012977Grasslands SoilMDQIMITIDGPNFQDFQEAEVARLPEEGEPIETKYGTCVVTSVEALPASDHFAGKVICRMS*
Ga0164309_1049265823300012984SoilMKHVVITIQGHGFQDVAEAEVLRLPEVGEAIETEYGTCVVSEVDPIPNGEPYDGKVVCRLP*
Ga0164305_1158600323300012989SoilVKHVVITIQGHGFQDVAEAEVLRLPEVGEAIETEYGTCVVSEVDPIPDGGPYDGKVVCRLP*
Ga0134078_1030657013300014157Grasslands SoilMITIDGPNFQDFQEAEVMGLPEEGEPIETKYGTCVVTSVDALPASEHFAGRVICRLS*
Ga0134089_1001742633300015358Grasslands SoilMITIDGANFQDFQEAEVPRLPEEGEPIETKYGTCVVTSVEALPDSEHFAGKVFCRLS*
Ga0184610_114741923300017997Groundwater SedimentVDRIIITIEGPNFQDREEAEVLRLPEEGEMINTKYGPCVVTGVEPLPDSDKFSGKVACRL
Ga0184605_1003034523300018027Groundwater SedimentVERIIVTIDGPNFQDFEEAEVVRLPEEGELISTKYGNCVVTAVEPLPTSDFLGKVICRMP
Ga0184605_1003686423300018027Groundwater SedimentMITIDGPNFQDLQEAEVPRLPEEGEPIETKYGTCVVTSVESLPASEHFAGKVICRMS
Ga0184605_1010823923300018027Groundwater SedimentVNHIIITIDGPNFQDLEEAEVLRLPEEGEAIETKYGTCLVTGVEPDPAGEHYDGKVFCRL
Ga0184619_1003680323300018061Groundwater SedimentVERIIVTIEGPNFQDQEEAEVLSLPEEGEMINTKYGPCVVTGVEPLPDSDKFSGKVACRM
Ga0184619_1037986413300018061Groundwater SedimentMITIDGPNFQDFQEAEVPRLPEEGEPIETKYGTCVVTSVEPLPASEHFAGKVICRMS
Ga0184609_1021338113300018076Groundwater SedimentDGPNFQDFQEAEVPRLPEEGEPIETKYGTCVVTSVEPLPASDHFAGKVICRMA
Ga0066667_1167532813300018433Grasslands SoilMITIDGPNFQDFQEAEVPRLPEEGEPIETKYGTCVVTSVEALPASDHFAGKVICRMS
Ga0190269_1008943123300018465SoilVNHIIITIDGPNFQDLEEAEVLRLPEEGEAIETKYGTCLVTEVEPDPAGEHYDGKVFCRL
Ga0066669_1213583923300018482Grasslands SoilMITIDGPNFQDFQEAEVMGLPEEGEPIETKYGTCVVTSVEALPASEHFAGRVICRLS
Ga0184643_122293623300019255Groundwater SedimentRIIVTIDGPNFQDFEEAEVVRLPEEGELISTKYGNCLVTAVEPLPDSDFLGKVSCRMP
Ga0184642_161275113300019279Groundwater SedimentRIIVTIDGPNFQDFEEAEVVRLPEEGELISTKYGNCVVTAVEPLPTSDFLGKVICRMP
Ga0184642_166373423300019279Groundwater SedimentVERIIVTIDGPNFQDFEETEVVRLPEEGELISTKYGTCVVTAVEPLAASDFLGKVACRMT
Ga0137408_120285723300019789Vadose Zone SoilMITIDGPNFQDFQEAEVPRLPEEGEPIETKYGTCVVTSVEALPDSEHFAGKVICRMA
Ga0193713_110550923300019882SoilVKHVVITIQGHGFQDVAEAEVLRLPEVGEAIETEYGTCVVSEIDPIPDGEPYDGKVVCRL
Ga0193727_100022393300019886SoilVKHVVITIQGHGFQDVAEAEVLRLPEVGEAIETEYGTCVVSEVDPMPDGEAYDGKVVCRL
Ga0193729_100212463300019887SoilMITIDGPNFQDVQEAEVARLPEEGEPIETKYGTCVVTSVEALPASEHFAGKVICRLS
Ga0193745_101800923300020059SoilVERIIVTIEGPNFQDREEAEVLSLPEEGEMIDTKYGPCVVTGVEPLPDSDKFSGKVACRMPY
Ga0210381_1003657323300021078Groundwater SedimentMITIDGPNFQDFQEAEVPRLPEEGEPIETKYGTCVVTSVEPLPASDHFAGKVICRMA
Ga0222622_1021073223300022756Groundwater SedimentVTIQGPGFQDFQEMEVVRMPEEGELISTKYDNCIVTSVELTPDSDFLGKVVCRLP
Ga0179589_1006806123300024288Vadose Zone SoilMITIDGPNFQDFQEAEVARLPEEGEPIETKYGTCVVTAVEALPASEHFAGKVTCRLS
Ga0179589_1015211023300024288Vadose Zone SoilVKHVVITIQGHGFQDVAEAEVLRLPEVGEAIETEYGTCVVSEVDPIPDGEAYDGKVVCRL
Ga0207699_1020097623300025906Corn, Switchgrass And Miscanthus RhizosphereMITIDGPNFQDFQEAEVARLPEEGEPIETKYGTCVVTAVEALPASDHFAGKVTCRLS
Ga0207663_1139728913300025916Corn, Switchgrass And Miscanthus RhizosphereFQDFQEAEVARLPEEGEPIETKYGTCVVTSVEALPASEHFAGKVICRLS
Ga0207702_1113582523300026078Corn RhizosphereMDQIMITIDGPNFQDFQEAEVARLPEEGEPIETKYGTCVVTSVEALPASEHFAGKVISRL
Ga0209470_105993423300026324SoilMITIDGPNFQDFQEAEVPRLPEEGEPIETKYGTCVVTSVEALPDSEHFAGKVFCRLS
Ga0209056_1013872623300026538SoilMITIDGPNFQDFQEAEVPRLPEEGEPIETKYGTCVVTSVEDSEHFAGKVICRMA
Ga0209811_1037770723300027821Surface SoilVERILVTIQGPGFQDFQEMEVLRLPEVGELISTKYDNCIVVSVELTPDSDFLGNVVCRLP
Ga0307303_1002321813300028713SoilVDRIIITIEGPNFQDREEAEVLSLPEEGEMINTKYGPCVVTGVEPLPDSDKFSGKVACRL
Ga0307313_1000177243300028715SoilVDRIIITIEGPNFQDREEAEVLRLPEEGEMINTKYGPCVVTGVEPLPDSDKFSGK
Ga0307313_1025048013300028715SoilATQVNHIIITIDGPNFQDLEEAEVLRLPEEGEAIETKYGTCLVTEVEPDPAGEHYDGKVFCRLP
Ga0307301_1012493913300028719SoilNFQDREEAEVLRLPEEGEMINTKYGPCVVTGVEPLPDSDKFSGKVACRLP
Ga0307301_1013415323300028719SoilTSAVERIIVTIDGPNFQDFEETEVVRLPEEGELIATKYGNCVVTAVEPLPTSDFLGKVVCRMP
Ga0307319_1000057473300028722SoilVERIIVTIDGPNFQDFEETEVVRLPEEGELIATKYGNCVVTAVEPLPTSDFLGKVVCRMP
Ga0307319_1025037523300028722SoilVNHIIITIDGPNFQDLEEAEVLRLPEEGEAIETKYGTCLVTAVEPDPAGEHYDGKVFCRL
Ga0307306_10000127163300028782SoilVTIQGPGFQDFQEMEVVRMPEEGELISTKYDNCIVTSVELTPESDFLGKVVCRLP
Ga0307299_1000365513300028793SoilVDRIIITIEGPNFQDREEAEVLRLPEEGEMINTKYGPCVVTGVEPLPDSDKFSGKV
Ga0307284_1029522723300028799SoilFQDQEEAEVLSLPEEGEMINTKYGPCVVTGVEPLPDSDKFSGKVACRMP
Ga0307294_1027529513300028810SoilIVTIEGPNFQDQEEAEVLSLPEEGEMINTKYGPCVVTGVEPLPDSDKFSGKVACRLP
Ga0307292_1000118843300028811SoilMVTIQGPGFQDFQEMEVVRMPEEGELISTKYDNCIVTSVELTPDSDFLGKVVCRLP
Ga0307302_1025796323300028814SoilVERIIVTIEGPNFQDQEEAEVLSLPEEGEMINTKYGPCVVTGVEPLPDSDKFSGKVA
Ga0307310_1001723613300028824SoilVDRIIVTIDGPNFQDFEEAEVVRLPEEGELISTKYGNCVVTAVEPLPASDFLGKVACRMP
Ga0307310_1054344323300028824SoilVNHIIITIDGPNFQDLEEAEVLRLPEEGEAIETKYGTCLVTGVEADPAGEHYDGKVFCRL
Ga0307289_1018308513300028875SoilIIITIDGPNFQDLEEAEVLRLPEEGEAIETKYGTCLVTGVEPDPAGEHYDGKVFCRLP
Ga0307278_1032484913300028878SoilSRSRWPASEPTLHRATQVNHIIITIDGPNFQDLEEAEVLRLPEEGEAIETKYGTCLVTAVEPDPAGEHYDGKVFCRLP
Ga0307277_1000694343300028881SoilMAMDQIMITIDGPNFQDFQEAEVMGLPEEGEPIETKYGTCVVTSVETLPDSEHFAGKVFCRLS
Ga0307304_1010721113300028885SoilITIEGPNFQDREEAEVLRLPEEGEMINTKYGPCVVTGVEPLPDSDKFSGKVACRLP
Ga0307304_1051859323300028885SoilLHRAAQVNHIIITIDGPNFQDLEEAEVLRLPEEGEAIETKYGTCLVTAVEPDPAGEHYDGKVFCRLP
Ga0247826_1123123623300030336SoilVERIIVTIHGPGFQHFEEMEVVRLPEEGELISTKYDSCIVTSVELTPDSDLLGRVDCRMP
Ga0075394_1083229313300030969SoilMITIDGPNFQDFQEAEVARLPEEGEPIETKYGTCVVTSVEELPASEHFAGKVTCRLS
Ga0308189_1023725823300031058SoilVDRIIVTIDGPNFQDFEETEVVRLPEEGELISTKYGNCLVTAVEPLPDSDFLGKVSCRMP
Ga0308181_110261413300031099SoilVDRIIITIEGPNFQDREEAEVLRLPEEGEMINTKYGPCVVTGVEPLPDSDKFAGKVACRM
Ga0307501_1021987023300031152SoilVKHVVITIQGHGFQDVAEAEVLRLPEVGEAIETEYGTCVVSEVDPIPEGEAYDGKVVCRL
Ga0308194_1012681223300031421SoilVDLIIITIEGPNFQDREEAEVLRLPEEGEMINTKYGPCVVTGVEPLPDSDKFSGKVACRL
Ga0307468_10189071013300031740Hardwood Forest SoilVKHVVITIEGPNFQDLEEAEVLRLPEEAEAIETKYGTCIVTRVEADPVGEHYDGKVFCRL
Ga0307471_10251870723300032180Hardwood Forest SoilMITIDGPNFQDFQEAEVARLPEEGEPIETKYGTCVVTSVEALPGSEHFAGKVICRLS

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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