NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F060388

Metagenome Family F060388

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F060388
Family Type Metagenome
Number of Sequences 133
Average Sequence Length 93 residues
Representative Sequence FGITQRDTFYWALPDPVRTKYGRAEWEAHFDVLGHYTRDPNAHWKAFDLDLRCPEGGRLHCLEVFGRQLVCALNGLHPQAVLAFAERRKAA
Number of Associated Samples 95
Number of Associated Scaffolds 133

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 1.67 %
% of genes near scaffold ends (potentially truncated) 88.72 %
% of genes from short scaffolds (< 2000 bps) 83.46 %
Associated GOLD sequencing projects 86
AlphaFold2 3D model prediction Yes
3D model pTM-score0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (89.474 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere
(19.549 % of family members)
Environment Ontology (ENVO) Unclassified
(62.406 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(48.120 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134
1JGI24746J21847_10717651
2rootH1_102538541
3Ga0063356_1031335831
4Ga0062594_1000191791
5Ga0062594_1004127591
6Ga0066869_100004902
7Ga0070676_109217221
8Ga0070676_110136612
9Ga0070670_1003846761
10Ga0070670_1019840542
11Ga0070660_1004728521
12Ga0070660_1009275112
13Ga0070660_1017893792
14Ga0070671_1005824663
15Ga0070671_1009747012
16Ga0070674_1014668862
17Ga0070673_1012758942
18Ga0070659_1003503813
19Ga0070659_1017767592
20Ga0070663_1006910512
21Ga0070678_1016938672
22Ga0070662_1004240693
23Ga0070662_1015414782
24Ga0070679_1011972061
25Ga0068853_1000958731
26Ga0070672_1010243621
27Ga0070665_1001054641
28Ga0068855_1004942103
29Ga0068855_1012580491
30Ga0068855_1022453882
31Ga0070664_1000660437
32Ga0070664_1013292932
33Ga0068854_1005512273
34Ga0068854_1014111732
35Ga0070702_1016258711
36Ga0068852_1014936871
37Ga0068851_104778891
38Ga0070715_103470691
39Ga0082029_11662632
40Ga0068871_1002789394
41Ga0079221_117380222
42Ga0079220_111085333
43Ga0079219_109793752
44Ga0079219_110554362
45Ga0105247_104319654
46Ga0105248_119106621
47Ga0126313_103894073
48Ga0126305_105488201
49Ga0150985_1049139592
50Ga0150984_1032888262
51Ga0150984_1092587712
52Ga0164299_110126702
53Ga0164301_110011821
54Ga0164302_118482271
55Ga0164308_117275712
56Ga0164307_113689471
57Ga0164306_116158642
58Ga0164305_112884401
59Ga0157373_105098862
60Ga0157369_115505322
61Ga0157369_121073522
62Ga0157378_132233072
63Ga0157375_124006162
64Ga0163163_101857921
65Ga0157377_103183854
66Ga0132255_1008447631
67Ga0190269_106905701
68Ga0193740_10552931
69Ga0247773_10571331
70Ga0207656_105169712
71Ga0207688_105398501
72Ga0207650_102216283
73Ga0207690_107451191
74Ga0207690_109841711
75Ga0207706_112222872
76Ga0207669_119495091
77Ga0207651_104879022
78Ga0207651_108169701
79Ga0207651_119572371
80Ga0207640_108703262
81Ga0207639_100602651
82Ga0207639_105388672
83Ga0207674_111095921
84Ga0207698_109840271
85Ga0247818_110937891
86Ga0247823_102363871
87Ga0247822_115753101
88Ga0247820_101914193
89Ga0247819_103971423
90Ga0247819_105682291
91Ga0247824_107640182
92Ga0247827_106082491
93Ga0247827_106137923
94Ga0307408_1006614952
95Ga0307405_114370971
96Ga0307413_101138821
97Ga0307410_105928592
98Ga0307410_118885741
99Ga0310892_103078861
100Ga0307407_106512542
101Ga0307407_107248753
102Ga0307412_107182472
103Ga0307412_114932852
104Ga0308175_1003324301
105Ga0308175_1032403222
106Ga0308174_111815631
107Ga0308174_116559742
108Ga0310884_110368791
109Ga0307409_1001666082
110Ga0307409_1004513473
111Ga0307409_1005257431
112Ga0307409_1011265091
113Ga0307409_1019271123
114Ga0308176_127795951
115Ga0310903_100268771
116Ga0307416_1000934105
117Ga0307414_100176211
118Ga0307414_101274633
119Ga0307414_104429602
120Ga0307414_120756271
121Ga0307411_102100621
122Ga0307411_102657824
123Ga0307411_104356802
124Ga0307411_109790581
125Ga0307411_111849531
126Ga0307411_119339931
127Ga0310902_111762261
128Ga0310906_108683322
129Ga0308173_104826821
130Ga0307415_1004514392
131Ga0315910_106897121
132Ga0247829_107075892
133Ga0373959_0161394_2_322
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 42.02%    β-sheet: 1.68%    Coil/Unstructured: 56.30%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

102030405060708090FGITQRDTFYWALPDPVRTKYGRAEWEAHFDVLGHYTRDPNAHWKAFDLDLRCPEGGRLHCLEVFGRQLVCALNGLHPQAVLAFAERRKAASequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.43
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
89.5%10.5%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Soil
Soil
Serpentine Soil
Termite Nest
Soil
Agricultural Soil
Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Corn Rhizosphere
Plant Litter
Arabidopsis Rhizosphere
Avena Fatua Rhizosphere
Corn Rhizosphere
Arabidopsis Thaliana Rhizosphere
Corn, Switchgrass And Miscanthus Rhizosphere
Miscanthus Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Sugarcane Root And Bulk Soil
Rhizosphere
Switchgrass Rhizosphere
Corn Rhizosphere
Miscanthus Rhizosphere
Rhizosphere Soil
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Avena Fatua Rhizosphere
7.5%3.0%15.8%10.5%19.5%7.5%3.8%9.8%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI24746J21847_107176513300001977Corn, Switchgrass And Miscanthus RhizosphereTFYWALPEPVRAQYGRGDWESNFDVLGQYSRDPNAYWGAFDLDLRCEEGGRLHCLEVFGRQLICALHGIHPHAVPAFVDSKTSRAA*
rootH1_1025385413300003323Sugarcane Root And Bulk SoilALPDAVRARYGRAEWEANFDILGRYTRDPNADWRAFGLDLCCEEGDALHCLEVFGRQLVCALRGLHPKAVLAFAEPETAKAA*
Ga0063356_10313358313300004463Arabidopsis Thaliana RhizosphereELPHLIDEASVELFGITPRDTFYWALPDPVRAQYGRAEWEANFNALGHWSRDPNAQWRAFDLDLCCEEGSSLHCLEVFGRQLVCALHGLHPHAVLAFADRKTSKAA*
Ga0062594_10001917913300005093SoilPYLIDEASLQLFGITQRDTFYWALPDPVRAEYGRSDWEANFDLLGHYTRDPNAHWHAFDLDLRCPEGGRLHCFEVFGRQLVTALHGLHPQAVLAFADRPQAQAA*
Ga0062594_10041275913300005093SoilPYLIDEASLQLFGITQRDTFYWALPDPVRARYGRSDWEANFDLLGHYTRDPNAHWHAFDLDLRCPQGGRLHCFEVFGRQLVVALHGLHPQAVLAFADRPQAQAA*
Ga0066869_1000049023300005165SoilLFGITANDTYYPALPEAVRAQYGRAEWEANFDSLGQYARDPNAHWREFGLDLCCDEGRPLHCLELFGRQLICALNGLHPLAVLAFADGDIAKAA*
Ga0070676_1092172213300005328Miscanthus RhizosphereELPHLIDDVSRELFGITANDTFYPALPEAVRAEYSRAEWEAHFDSLGHYAKDANAYWSGFGLDCCCDEGRALHCLDAFGRQLICALNRLHPEAILAFACGELAKAA*
Ga0070676_1101366123300005328Miscanthus RhizosphereELFGITANDTLYPALPEAVRASYGRAQWEANFDRLGQYGRDANAYWSGFGLDCCCDEGRALHCLDVFGRQLICALNGLHPQAVLAFADGELAKAA*
Ga0070670_10038467613300005331Switchgrass RhizosphereRELFGITANDTFYPALPEAVRAEYSRAEWEAHFDSLGHYAKDANAYWSGFGLDCCCDEGRSLHCLDAFGRQLICALNRLHPEAMLAFAGGELAKAA*
Ga0070670_10198405423300005331Switchgrass RhizosphereEELPYLIDEASLQLFGITQRDTFYWALPDPVRARYGRSDWEANFDLLGHYTRDPNAHWHAFDLDLRCPQGGRLHCFEVFGRQLVVALHGLHPQAVLAFADRPQAQAA*
Ga0070660_10047285213300005339Corn RhizosphereEELPYLIDEASLGLFGITRQDTLYWALPASVRAQHDRQTWEAHFDVLGSRDPNAHWGGFDLDLRCEEGSSLHCLEVFGRQLVCALHGLHPKAIFAFADRRQAA*
Ga0070660_10092751123300005339Corn RhizosphereEEAEELPHLIDDASRELFGITANDTFYPALPDAVRAKYGRAEWEANFDLLGEYAREPNEYWRGFGLDCCCGEGRSLHCLAVFGRQLICALNGLHPHAVLPFASPEIAQAA*
Ga0070660_10178937923300005339Corn RhizosphereTRRDTFYWALPQPVRAQYRRAEWEENFDVLGEYRRDPNAHWAAFDLDLRCAEGSTLHCLEVFGRQLVCALDGLHPQAVLAFANRKASRAA*
Ga0070671_10058246633300005355Switchgrass RhizosphereGLFGITRQDTLYWALPASVRAQHDRQTWEAHFDVLGSRDPNAHWGGFDLDLRCEEGSSLHCLEVFGRQLVCALHGLHPKAIFALADRRQAA*
Ga0070671_10097470123300005355Switchgrass RhizosphereFGITQRDTFYWALPEPVRAQYGRGDWESNFDVLGQYSRDPNAYWGAFDLDLRCEEGGRLHCLEVFGRQLICALHGIHPHAVPAFVDSKTSRAA*
Ga0070674_10146688623300005356Miscanthus RhizosphereRSDWEANFDLLGHYTRDPNAHWHAFDLDLRCPEGGRLHCLEVFGRQLVCALDGLHPDAVLAFAERNRAEAA*
Ga0070673_10127589423300005364Switchgrass RhizosphereELPHFIDDASVQLFGITQRDTFYWALPEPVRAQYGRGDWESNFDVLGQYSRDPNAYWGAFDLDLRCEEGGRLHCLEVFGRQLICALHGIHPHAVPAFVDSKTSRAA*
Ga0070659_10035038133300005366Corn RhizosphereYWALPDAVRARYGRTEWEANFDILGHYTRDPNAHWRAFGLDLRCEQGDTLHCLEAFGRQLVCALHGLHPNAVLAFAERETAKAA*
Ga0070659_10177675923300005366Corn RhizosphereLPDPVRARFGRAEWEENFDVLGHYTRDPNAHWGTFDLDLRCPEGGRLHCLEVFGRQLICALNGLHPQAVLAFADRKAAKAA*
Ga0070663_10069105123300005455Corn RhizosphereYLVDEASLRLFGITRQDTFYWALPAPVRARHDCHAWEAHFDILGQYSREPNAHWSAFDLDLRCEEGSSLHCLDVFGRQLVCALHGLHPNAIAAFAGRKAAQAA*
Ga0070678_10169386723300005456Miscanthus RhizosphereFYWALPDPVAAQYGRAEWEAHFDVLSHYTRDPNAHWKAFDLDLRCEEGGRLHCLEVFGRQLVCALNGLHPQAVPAFADRDAAKAA*
Ga0070662_10042406933300005457Corn RhizosphereLGLFGITRQDTLYWALPASVRAQHDRQTWEAHFDVLGSRDPNAHWGGFDLDLRCEEGSSLHCLEVFGRQLVCALHGLHPKAIFALADRRQAA*
Ga0070662_10154147823300005457Corn RhizospherePVRARFGRAEWEENFDVLGHYTRDPNAHWGTFDLDLRCPEGGRLHCLEVFGRQLICALNGLHPQAVLAFADRKAAKAA*
Ga0070679_10119720613300005530Corn RhizosphereNDTIYPALPDAVRAKYGRAKWEAHFDSLAQYARDPNAAWRPFGLDLCCEEGRSLHCLELFGRQLICALHRLHPLAVLAFADGDIAKAA*
Ga0068853_10009587313300005539Corn RhizosphereFGITANDTIYPALPDAVRARYGRAEWEANFDILGHYTCDPNTHWRAFGLDLRCEQGGTLHCLEVFGRQLVCALGGLHPNAVLAFAEPETAKAA*
Ga0070672_10102436213300005543Miscanthus RhizosphereFGITQSDTFYGKLPDPVRARFGRAEWEENFDVLGHYTRDPNAHWGTFDLDLRCPEGGRLHCLEVFGRQLICALNGLHPQAVLAFADRKAAKAA*
Ga0070665_10010546413300005548Switchgrass RhizosphereYPALPDSVRTSCDRAEWEANFDALGQYSRDPNAHWREFGLDLCCDEGRSLHCLDAFGRQLICALNGLHPLAALAFDDREIPQAA*
Ga0068855_10049421033300005563Corn RhizosphereGRTEWEANFDILGHYTRDPNAHWRAFGLDLRCEQGDTLHCLEVFGRQLVCALHGLHPNAVLAFAEPETAKAA*
Ga0068855_10125804913300005563Corn RhizosphereEELPHLIDDASRALFGITANDTIYPALPDAVRAKYGRAKWEAHFDSLAQYARDPNAHWRAFGLDLCCEQGDALHCLELFGRQLICALDGLHPNAVLAFADRELPRAA*
Ga0068855_10224538823300005563Corn RhizospherePALPEAVRASYGRAQWEANFDRLGQYGRDANAYWSGFGLDCCCDEGRALHCLDVFGRQLICALNGLHPQAVLAFADGELAKAA*
Ga0070664_10006604373300005564Corn RhizosphereITANDTVYLALPEAVRAKYGRAEWEANFDSLGRYSRDPNAHWHAFGLDLCCEEGRSLHCLELFGRQLICALHRLHPLAVLAFADRELPRAA*
Ga0070664_10132929323300005564Corn RhizosphereEEAEELPHLIDDASRELFGITANDTFYPALPDSVRTSCDRAEWEANFDALGQYSRDPNAHWREFGLDLCCDEGRSLHCLDAFGRQLICALNGLHPLAALAFDDREIPQAA*
Ga0068854_10055122733300005578Corn RhizosphereRYGRTEWEANFDILGHYTRDPNAHWRAFGLDLRCEQGDTLHCLEAFGRQLVCALHGLHPNAVLAFAERETAKAA*
Ga0068854_10141117323300005578Corn RhizosphereALPAPVRAQHDRQAWEAHFDVLGSRDPNAHWGGFDLDLRCEEGSSLHCLEVFGRQLVCALHGLHPKAIFAFADRRQAA*
Ga0070702_10162587113300005615Corn, Switchgrass And Miscanthus RhizosphereGITANDTFYRALPDEVRAKYGPTEWEAHFASLGQYRRDANREWRDFGLDLCCEEGHALHCLDVFGRQLLCALNGLHPQAMLAFADREIAKAA*
Ga0068852_10149368713300005616Corn RhizosphereDTFYWALPDAVRARYGRTEWEANFDILGHYTRDPNAHWRAFGLDLRCEQGDTLHCLEVFGRQLVCALHGLHPNAVLAFAERETAKAA*
Ga0068851_1047788913300005834Corn RhizosphereASAELFGITRRDTLYWALPESIRAQFTRDGWEENFDFLGYYSREPNAAWRVFDLDLCCEEGRSLHCLEVFGRQLVCAVRGLHPQAVLAFADRRTAQAA*
Ga0070715_1034706913300006163Corn, Switchgrass And Miscanthus RhizosphereDTLYPALPEAVRASYGRAQWEANFDRLGQYGRDANAYWSGFGLDCCCDEGRALHCLDVFGRQLICALNGLHPQAVLAFADGELAKAA*
Ga0082029_116626323300006169Termite NestLPHLIDDASMDLFGITRRDTFYWALPAPVTARYGRDEWEAHFDPLGHFTRDPNAHWTAFDLDLRCEQGGRLHCSEVFGRQLIVALRGLHPDAVLAFAGKERKAA*
Ga0068871_10027893943300006358Miscanthus RhizosphereLPEPVRGRYNRVGWEMQFALLGQYSRDPNAPWRAFDLDVRCPRGGRLHCFELFGRQLVCALRGLHPQAVLPFADRKKAA*
Ga0079221_1173802223300006804Agricultural SoilPHLVDDASRELFGITANDTIYPALPDAVRAKYGRAKWKAHFDSLAQYARDPNAAWRPFGLDLCCEEGRSLHCLEVFGRQLVCALNGLHPNAVLAFADRELPRAA*
Ga0079220_1110853333300006806Agricultural SoilDEASLQLFGITSQDTFYWALPDAVRARYGRAEWEANFDILGHYSRDRNAHWRAFGLDLCCEAGDTLHCLEVFGRQLVCALNRLHPKAVLAFADRELAKAA*
Ga0079219_1097937523300006954Agricultural SoilVRARFTRAAWEEQFDMLGHYTRAPNAHWSAFDLDLRCPEGRRLHCLEVFGRQLVCATRGLHPDAVLAFAGGRAARAA*
Ga0079219_1105543623300006954Agricultural SoilITANDTLYPALPEAVRVRFGRAGWEAHFDGLGQYARDANAPWREFGLDLCCEEGRSLHCLELFGRQLICALHGLHPLARLAFAGGDVAKAA*
Ga0105247_1043196543300009101Switchgrass RhizosphereFGITANDTLYPALPEAVRASYGRAQWEANFDRLGQYGRDANAYWSGFGLDCCCDEGRALHCLDVFGRQLICALNGLHPQAVLAFADGELAKAA*
Ga0105248_1191066213300009177Switchgrass RhizosphereAEELPHLIDDASRALFGITANDTFYRALPDEVRAKYGPTEWETHFASLGQYRRDANGEWRDFGLDLCCEEGHALHCLDVFGRQLLCALNGLHPQAMLAFADREIAKAA*
Ga0126313_1038940733300009840Serpentine SoilPHLVDDASLALFGITQRDTLHWALPDAVRAQYGRAEWEANFDVLGHYTRDPNAHWSAFDLDLRCEEGGRLHCLELFGRQLICAVHGLHPQAVLAFADRRIFRAA*
Ga0126305_1054882013300010036Serpentine SoilDDEVEELPHLVDDASLALFGITRRDTLHWALPDAVRAQYGRAEWEANFDVLGHYTRDPNAHWSAFDLDLRCEEGGRLHCLELFGRQLICALHGLHPQAMLAFADRRIFRAA*
Ga0150985_10491395923300012212Avena Fatua RhizosphereGITQRDTFHWALPDALRKQYDRLEWEEKFDVVGRYTRDPNALWSGFGLDLRCAKGFSLHCVEVFGRQLICALDRLHPHAMLRFADSEIAHAA*
Ga0150984_10328882623300012469Avena Fatua RhizosphereLFDTASMELFGITQRDTFYWALPEPVRVQYGRTEWKANFDLLGHYTRDPNAHWNKFDFDLRCEQGGRLHCFEVFGRQLVCALGGLHPQAVLAFADRKTSQAA*
Ga0150984_10925877123300012469Avena Fatua RhizosphereEAEELPHLIDDASRELFGITANDTYYPALPEAVRANYGRAEWEASFEMLGQYARDPNARWRGFGLDPCCDQGRALHCLDVFGRQLICALNGLHPHAIPTFMSGEIARAA*
Ga0164299_1101267023300012958SoilPHLIDDASHALFGITANDTFYPALPEAVRARYGRAEWEANFDSLAQYARDPNAHWREFGLDLCCAGRSLHCLELFGRQLICALGGLHPQATLAFGDREIAQAA*
Ga0164301_1100118213300012960SoilHLIDDASRALFGITANDTLYPALPEAVRARYGRAEWEANFDSLGQYARDPNAPWREFGLDLCCDEGRSLHCLELFGRQLICALGGLHPQATLAFGDREIAQAA*
Ga0164302_1184822713300012961SoilDEAEELPHLIDDASRGLFGITANDTIYPALPDAVRARYGRAEWEAHFDLLGQYARDPNAHWRGFGLDLCCDERRSLHCLELFGRQLICTLHGLHPLAVLAFAGGDMARAA*
Ga0164308_1172757123300012985SoilEPVRGKYGHTEWEKNFDVLCRYTRCPNAPWVAFNLDLRCEQGGRLHCFEVFGRQLVCAIRGLHPRAALAFADRKAA*
Ga0164307_1136894713300012987SoilITQRDTFYWALPDPVRARYGRAEWEANFDALGHWSRDPNAQWRTFDLDLCCEEGRSLHCLEVFGRQLVCALHGLHPQAVIAFADRKTSQAA*
Ga0164306_1161586423300012988SoilLFGITQRDTFYWALPDPVRARYGRAEWEANFDALGHWSRDPNAQWRTFDLDLCCEEGRSLHCLEVFGRQLVCALHGLHPQAVIAFADRKTSQAA*
Ga0164305_1128844013300012989SoilITRQDTLYWALPEPVRVKFTRTAWEENFEPLGHYTRDPNAHWSAFDLDLRCPEGGRLHCLEVFGRQLICATDRLHPEAVLAFSDRRAARAA*
Ga0157373_1050988623300013100Corn RhizosphereIDAASLELFGITSQDTFYFALPDAVRAQYGRAEWEANFDILGHYTRDPNAHWRAFGLDLRCEQGDTLHCLEVFGRQLVCALHGLHPNAVLAFAEPETAKAA*
Ga0157369_1155053223300013105Corn RhizosphereALPHPVRAKFSRSGWEENFDVLGHYTRDPNAHWRAFDLDLRCDKGGRLHCFEMFGRQLVCALHGLHPQAVLAFTDREIAEAA*
Ga0157369_1210735223300013105Corn RhizosphereESVRAQYGRAEWEANFDILGHYTRDPNAHWLAFGLDLCCEQGDTLHCTEAFGRQLICALHGLHPDATPAFAEPETAKAA*
Ga0157378_1322330723300013297Miscanthus RhizosphereAIRGQYGRTEWEENFDVLGEYSRDPNAHWASFDLDLRCEEGDSLHCLELFGRQLVCALNGLHPGAVLAFADRDTAKAA*
Ga0157375_1240061623300013308Miscanthus RhizosphereDPIRARCSRSEWEEQFDVLGHYTRDPNAHWIAFDLDLRCEEGDRLHCLEVFGRQLVCALNGLHPEAVLAFANREEAEAA*
Ga0163163_1018579213300014325Switchgrass RhizosphereAEELPHLIDDASRELFGITANDTLYPALPESVRAKYGRAEWEANFNLLGQYGRDANAYWSGFGLDCCCDEGRALHCLDVFGRQLICALNGLHPQAVLAFADGELAKAA*
Ga0157377_1031838543300014745Miscanthus RhizosphereEELPHLIDDASRALFGITANDTNYPALPEAVRARYGRSEWEANFESLGQYARDPNAHWREFGLDLCCEEGRSLHCLELFGRQLICALNGLHPQAVLAFADGELAKAA*
Ga0132255_10084476313300015374Arabidopsis RhizosphereFYPALPEAVRAQYGRAEWEKNFDSLGDYAREPNAQWRGFGLDLCCEEGRSLHCLDAFGRQLICALHGLHPLAVLAFADDREIPQAA*
Ga0190269_1069057013300018465SoilPLRGRFGRAEWEAHFDVLGHYTRDPNAHWDAFDLDLRCPEGGRLHCLEVFGRQLVCALNGLHPNAVLAFAERREAA
Ga0193740_105529313300020009SoilITRRDTFYWALPDPVRARYGRAEWEEQFDVLGRHSRDPNAHWRAFDLDLCCEEGSSLHCLEVFGRQLVCALHGLHPQAVIAFVDRKAREAA
Ga0247773_105713313300023269Plant LitterYWALPDPVRARYGRAEWEANFDAMGHWSRDPNAQWRTFDLDLCCEEGRSLHCLEVFGRQLVCALHGLHPQAVIAFADRKTSQAA
Ga0207656_1051697123300025321Corn RhizosphereDEASAELFGITRRDTLYWALPESIRAQFTRDGWEENFDFLGYYSREPNAAWRVFDLDLCCEEGRSLHCLEVFGRQLVCAVRGLHPQAVLAFADRRTAQAA
Ga0207688_1053985013300025901Corn, Switchgrass And Miscanthus RhizosphereLIDDASRALFGITANDTNYPALPEAVRARYGRSEWEANFDGLGQYARDPNAHWREFGLDLCCDEGRSLHCLELFGRQLICALGGLHPLAALAFDDREIPQAA
Ga0207650_1022162833300025925Switchgrass RhizosphereFRITQRDTFYWALPDPVRANYGRAEWEAHFDRLGHYTRDPNAHWRAFGLDLRCPEGGRLHCLEAFGRQLVCALHGLHPRAVLAFLDRPEAQAA
Ga0207690_1074511913300025932Corn RhizosphereDVSRELFGITANDTFYPALPEAVRAEYSRAEWEAHFDSLGHYAKDANAYWSGFGLDCCCEQGRSLHCLDAFGRQLICALNRLHPEAMLAFAGGELAKAA
Ga0207690_1098417113300025932Corn RhizosphereASRELFGITANDTFYPALPDSVRTSCDRAEWEANFDALGQYSRDPNAHWREFGLDLCCDEGRSLHCLDAFGRQLICALNGLHPLAALAFDDREIPQAA
Ga0207706_1122228723300025933Corn RhizosphereLFGTTQSDTFYGKLPEPVRARFGRAEWEENFDVLGHYTRDPNAHWGTFDLDLRCPEGGRLHCLEVFGRQLICALNGLHPQAVLAFADRKAAKAA
Ga0207669_1194950913300025937Miscanthus RhizosphereLPHIIDDASLALFGITERDTLYWALPDPVRAQYGRAEWEANFDALGQWSRDPNAHWHAFDLDVSCEEGSSLHCLEVFGRQLVCALHGLHPQAVLAFADPKT
Ga0207651_1048790223300025960Switchgrass RhizosphereLFGITQSDTFYGKLPDPVRARFGRAEWEENFDVLGHYTRDPNAHWGTFDLDLRCPEGGRLHCLEVFGRQLICALNGLHPQAVLAFADRKAAKAA
Ga0207651_1081697013300025960Switchgrass RhizosphereDDASRALFGITANDTFYPALPEAVRARYGRSEWEANFESLGQYARDPNAHWREFGLDLCCEEGRSLHCLELFGRQLICALNGLHPQARLAFGDREIAQAA
Ga0207651_1195723713300025960Switchgrass RhizosphereYPALPEPLRATYGRAEWEANFEMLGQYARDPNAHWLSFGLDCCCEEGRSLHCLEVFGRQLVCALNELHPNAVLAFANVPTAKAA
Ga0207640_1087032623300025981Corn RhizosphereLYWALPAPVRAQHDRQAWEAHFDVLGSRDPNAHWGGFDLDLRCEEGSSLHCLEVFGRQLVCALHGLHPKAIFAFADRRQAA
Ga0207639_1006026513300026041Corn RhizosphereLPHLIDDASRELFGITANDTFYPALPDAVRARYGRAEWEANFDILGHYTCDPNTHWRAFGLDLRCEQGGTLHCLEVFGRQLVCALGGLHPNAVLAFAEPETAKAA
Ga0207639_1053886723300026041Corn RhizosphereITQRETFFWALPEPLRGRYGRIEWEEKFDVLGHYTRDPNAHWRAFDLDVRCEKGSRLHCFEVFGRQLICALRALHPRAVPAFASPQISQAA
Ga0207674_1110959213300026116Corn RhizosphereVGNSGSSFEPHLHFELTTSDDVMRGEGLPYLIDEASLGLFGITRQDTLYWALPASVRAQHDRQTWEAHFDVLGSRDPNAHWGGFDLDLRCEEGSSLHCLEVFGRQLVCALHGLHPKAIFALADRRQAA
Ga0207698_1098402713300026142Corn RhizosphereRPAWEAHFDVLGRYSRDPNSHWSAFDLDLRCEEGNSLHCLEVFGRQLVCALHGLHPKAILAFADRRQAA
Ga0247818_1109378913300028589SoilQYGRLQWEAHFDVLGHFTRDPNAHWKAFDLDLRCDQGGRLHCLEVFGRQLVCAISGLHPRAVLAFAEGRTSEAA
Ga0247823_1023638713300028590SoilREKYGRAEWEEHFEMLGHYTRDPNAHWHSYDLDLRCVEGGRLHCLEVFGRQLVCALKGLHPNAVTAFADGGRRKAA
Ga0247822_1157531013300028592SoilLIDAASTELFGITQQDTFYWALPEPVREKYGRAEWEEQFELLGHYTRDPNAHWHSYDLDLRCEEGGRLHCLEVFGRQLVCALKGLHPNAVIAFADGGRRKAA
Ga0247820_1019141933300028597SoilLEPVRAKFSRADWEEHFDLLGHYTRDPNAHWHAHGLDLRCPEGGRLHCLEVFGRQLICALNGLHPQAMLAFTDEARAEAA
Ga0247819_1039714233300028608SoilVRAQYGRVEWEANFDILGHYTRDPNAHWSTFDLDLRCEEGGRLHCLELFGRQLICAVHGLHPQAVLAFADRRIFRAA
Ga0247819_1056822913300028608SoilFSRADWEEHFDLLGHYTRDPNAHWHAHGLDLRCPEGGRLHCLEVFGRQLICALNGLHPQAMLAFTDEARAEAA
Ga0247824_1076401823300028809SoilLQLFGIAQRDTFYWALPDPVRAEYGRSDWEANFDLLGHYTRDPNAHWHAFDLDLRCPEGGRLHCFEVFGRQLVTALHGLHPQAVLAFADRPQAQAA
Ga0247827_1060824913300028889SoilFYWALPDPVRARYGRAEWEEQFDVLGRHSRDPNAHWSAFDLDLCCEEGSSLHCLEVFGRQLVCALHGLHPQAVLAFADRTTSRAA
Ga0247827_1061379233300028889SoilTQYGRAEWEANFNALGHWSRDPNAQWRAFDLDLCCEEGSSLHCLEVFGRQLVCALHGLHPHAVLAFADRKTSKAA
Ga0307408_10066149523300031548RhizosphereELPHLIDDASRELFGITANDTFYPALPEAVRAEYGRAEWEAHFDMLGQYARDPNAHWRAFGLDCCCDEGRPLRCLDVFGRQLVCALNRLHPGAVLAFADREIAQAA
Ga0307405_1143709713300031731RhizosphereEAEELPHLIDAASRELFGITANHTFYPALPEALRAQYDRAEWEANFDSLGQYARDPNAHWLAFGLDCCCDEGRALHCLDVFGRQLVCALNGLHPHAVLAFADGEIAEAA
Ga0307413_1011388213300031824RhizosphereQRDTFYSALPDPVRARFGRDEWEAQFDVLGHYTRDPNAHWAHFDLDLRCPEGGRLHCLEVFGRQLVCATRGLHPQAVLAFADRKTAEAA
Ga0307410_1059285923300031852RhizosphereGRAEWEAHFDLLGHYTRDPNAHWNAFGLDLCCPEGGRLHCFEAFGRQLVCALHGLHPNAALAFADRRTAEAA
Ga0307410_1188857413300031852RhizosphereEDASVQLFGITRQDTFYWALPESVATRYGREEWEVNFDVLGHYTRDPNAHWNAFDLDLRCEQGGRLHCSEVFGRQLVCALNGLHPKAVLAFAGKEKEAA
Ga0310892_1030788613300031858SoilDDASVQLFGITQRDTFYWALPEPVRAQYGRGDWESNFDVLGQYSRDPNAYWGAFDLDLRCEEGGRLHCLEVFGRQLICALHGIHPHAVPAFVDSKTSRAA
Ga0307407_1065125423300031903RhizosphereRRDTLHWALPDPVRARFGRDEWEAHFDVLGHYTRDPNAHWAAFDLDLRCPEGGRLHCLEVFGRQLVCALHGLHPQAVLAFADGRTARAA
Ga0307407_1072487533300031903RhizospherePDPVRERHSRAEWEDKFDVLSQYTRDPNAHWQAFGLDLRCPEGGRLHCFEVFGRQLVCALNGLHPQAVLAFADDRRKEAA
Ga0307412_1071824723300031911RhizospherePDQVRAEYGRAEWEAHFDLLGHYTRDPNAHWNAFGLDLCCPEGGRLHCFEAFGRQLVCALHGLHPNAVLAFEGRRTAEAA
Ga0307412_1149328523300031911RhizosphereFGITRRDTLHWALPDPLRGKYSRAEWEAHFDVLGHWSRDPNAYWKAFDLDLRCEEGGRLHCLEVFGRQLLCALQGLHPQAVLAFADRRTSQAA
Ga0308175_10033243013300031938SoilLLAEEEAEELPHLIDDASRELFGITANDTFYPALPEPVRGRYSRVQWEANFDVLGQYTRDPNAHWRGFGLDLCCEEGRSLHCLELFGRQLICALHGLHPEAVLAFAERKAQAA
Ga0308175_10324032223300031938SoilLPHRIDDASRELFGITANDTFYPALPEAVRAKYGRAEWEANFDSLGCYSRDPNAHWRAFGLDLCCEQGDALHCLEVFGRQLICALQGLHPNAVLAFADRELPRAA
Ga0308174_1118156313300031939SoilDATSVELFGITARDTFYWALPDAVRVQYRRAEWEAHFDVLGQYSRDANAHWRPFDLDLCCAQGNSLQCLEVFGRQLVCALHGLHPQAVLAFTDREAAKAA
Ga0308174_1165597423300031939SoilFGITANDTIYPALPDAVRAKYGRAKWEAHFDSLAQYARDPNAHWRAFGLDLCCEQGDALHCLELFGRQLICALHRLHPKAVLAFADRELPRAA
Ga0310884_1103687913300031944SoilGRLQWEAHFDVLGHFTRDPNAHWKAFDLDLRCDQGGRLHCLEVFGRQLVCAISGLHPRAVLAFAEGRTSEAA
Ga0307409_10016660823300031995RhizosphereRRDTLHWALPDPVRARFGRDEWEAHFDVLGHYTRDPNAHWAAFDLDLRCPEGGRLHCLEVFGRQLVCALHGLHPQAVLAFADRRTARAA
Ga0307409_10045134733300031995RhizosphereHLIDDASVQLFGITRRDTFYWALPEPVRARYGRADWEAHFDVLGHYTRDPNAHWSAFDLDLRCPEGGRLHCLEVFGRQLVCALDGLHPQAVLAFADRKAREAA
Ga0307409_10052574313300031995RhizosphereHLIEDAAVQLFGITRQDTFYWALPEPVATRYGREQWEANFDVLGHYTRDPNAHWNAFDLDLRCEQGGRLHCSEVFGRQLVCALNGLHPKAVLAFTGKEKKAA
Ga0307409_10112650913300031995RhizosphereREEWEVNFDVLGHYTRDPNAHWNAFDLDLRCEQGGRLHCSEVFGRQLVCALNGLHPKAVLAFAGKEKEAA
Ga0307409_10192711233300031995RhizospherePHLIDDASVQLFGITQRDTFYWALPDPVRERHSRAEWEGKFDVLSHYTRDPNAHWQAFGLDLRCAEGGRLHCFEVFGRQLVCALNGLHPQAVLALADGGRKEAA
Ga0308176_1277959513300031996SoilELPHLIDDASRELFGITANDTFYPALPEPVRGRYSRVQWEANFDVLGQYTRDPNAHWRGFGLDLCCEEGRSLHCLELFGRQLICALHGLHPEAVLAFAERKAQAA
Ga0310903_1002687713300032000SoilDDIEELPHFIDDASVQLFGITQRDTFYWALPEPVRAQYGRGDWESNFDVLGQYSRDPNAYWGAFDLDLRCEEGGRLHCLEVFGRQLICALHGIHPHAVPAFVDSKTSRAA
Ga0307416_10009341053300032002RhizosphereLDDEVEELPHLIEDAAVQLFGITRQDTFYWALPEPVATRYGREQWEANFDVLGHYTRDPNAHWNAFDLDLRCEQGGRLHCSEVFGRQLVCALNGLHPKAVLAFTGKEKKAA
Ga0307414_1001762113300032004RhizosphereRTEWESQFDMLSQYTRDPNAHWAAFDLDLRCPEGGRLHCFEVFGRQLVCALHGLHPQAVLAFAQRETARAA
Ga0307414_1012746333300032004RhizosphereASVQLFGITRQETFYWALPEVVATRYGRDEWEANFDVLGHYTRDPNAHWNAFDLDLRCEQGGRLHCSEVFGRQLVCALNGLHPKAVLAFAGKEKKAA
Ga0307414_1044296023300032004RhizosphereVQLFGITRQDTFYWALPEPVATRYGREQWEANFDVLGHYTRDPNAHWNAFDLDLRCEQGGRLHCSEVFGRQLVCALNGLHPKAVLAFTGKEKKAA
Ga0307414_1207562713300032004RhizosphereHLIDDASVELFGITRRDTFYWALPDPLRGKYSRAEWEANFDVLGHWSRDPNAQWKAFDLDLRCEEGGRLHCLEAFGRQLVCALNGLHPQAVLAFTGLRTSQAA
Ga0307411_1021006213300032005RhizosphereFGITQRDTFYWALPDPVRTKYGRAEWEAHFDVLGHYTRDPNAHWKAFDLDLRCPEGGRLHCLEVFGRQLVCALNGLHPQAVLAFAERRKAA
Ga0307411_1026578243300032005RhizosphereTFYWALPAPVTARYGRDEWEAHFDLLGQYTRDPNEHWNAFDLDLRCDEGGRLHCTEVFGRQLVVALRGLHPNAVLAFADRKKAA
Ga0307411_1043568023300032005RhizosphereLPEPVATRYGREQWEANFHVLGHYTRDPNAHWNAFDLDLRCEQGGRLHCSEVFGRQLVCALNGLHPKAVLAFTGKEKKAA
Ga0307411_1097905813300032005RhizosphereTLHWALPDPVRARFGRDEWEAHFDVLGHYTRDPNAHWAAFDLDLRCPEGGRLHCLEVFGRQLVCALHGLHPQAVLAFADRAREAA
Ga0307411_1118495313300032005RhizosphereALFGITQRDTFYWALPAPTRDRYSAAEWEAQFDALSRYSRDPNAAWIPFGLDLCCPEGRGLHCVEVFGRQLVCALNGLHPQAVLAFADRRMPRAA
Ga0307411_1193399313300032005RhizosphereQDTFYWALPESVATRYGREEWEVNFDILGHYTRDPNAHWNAFDLDLRCEQGGRLHCSEVFGRQLVCALNGLHPKAVLAFAGKEKEAA
Ga0310902_1117622613300032012SoilVEALPHLIDDASIQLFGITQRDTFYWALPDPVRAEYGRSDWEANFDLLGHYTRDPNAHWHAFDLDLRCPEGGRLHCFEVFGRQLVTALHGLHPQAVLAFADRPQAQAA
Ga0310906_1086833223300032013SoilDDASRELFGITANDTFYPALPEAVRARYGRAEWEANFDLLGQYAREPNGYWLAFGLDCCCEEGRSLHCLEMFGRQLICALERLHPQALLAFAHREIARAA
Ga0308173_1048268213300032074SoilTSVALFGITRRDTLYWALPEPVRDRFGRAEWEEHFDSLGHYTRDPNTPWRAFDLDLRCEQGGRLHCFEVFGRQLVCAVRGIHPQAVLAFANPKTAEAA
Ga0307415_10045143923300032126RhizosphereVATRYGREQWEANFDVLGHYTRDPNAHWNAFDLDLRCEQGGRLHCSEVFGRQLVCALNGLHPKAVLAFTGKEKKAA
Ga0315910_1068971213300032144SoilDTFYWALPDPVRAQYGRAQWEAHFDVLGYFTRDPNAHWASFDLDLRCEEGGRLHCLEVFGRQLVCALNGLHPQAVLVFANRMTARAA
Ga0247829_1070758923300033550SoilITANDSFYPALPEAVRARYGRAEWEANFDLLGQYAREPNGYWLAFGLDCCCEEGRSLHCLEMFGRQLICALERLHPQALLAFAHREIARAA
Ga0373959_0161394_2_3223300034820Rhizosphere SoilELPHLLDDASVALFGITQSDTFYPALPPAVRVKFGRAEWESQFDLLGQHTRDPNAHWQAFDLDLRCPEGRGLHCLEVFGRQLVCALHGLHPRAVLAFADGATARAA


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.