Metagenome / Metatranscriptome Family F060283

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F060283
Family Type	Metagenome / Metatranscriptome
Number of Sequences	133
Average Sequence Length	42 residues
Representative Sequence	MKVEKEKFDSLLGKLLKAKPEPRKKIKTKGRRGPKTPILAK
Number of Associated Samples	110
Number of Associated Scaffolds	133

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	24.24 %
% of genes near scaffold ends (potentially truncated)	22.56 %
% of genes from short scaffolds (< 2000 bps)	71.43 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.28

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (63.158 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (34.587 % of family members)
Environment Ontology (ENVO)	Unclassified (38.346 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (42.105 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 18.84% β-sheet: 0.00% Coil/Unstructured: 81.16%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.28
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.28
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 133 Family Scaffolds
PF12762	DDE_Tnp_IS1595	24.06
PF12686	DUF3800	3.76
PF01381	HTH_3	2.26
PF13274	DUF4065	2.26
PF05066	HARE-HTH	1.50
PF00574	CLP_protease	1.50
PF12760	Zn_Tnp_IS1595	1.50
PF05973	Gp49	1.50
PF13673	Acetyltransf_10	0.75
PF06803	DUF1232	0.75
PF13384	HTH_23	0.75
PF02452	PemK_toxin	0.75
PF00691	OmpA	0.75
PF14534	DUF4440	0.75
PF05534	HicB	0.75
PF00881	Nitroreductase	0.75
PF10263	SprT-like	0.75
PF02769	AIRS_C	0.75
PF02661	Fic	0.75
PF09335	SNARE_assoc	0.75
PF15919	HicB_lk_antitox	0.75
PF02621	VitK2_biosynth	0.75
PF13350	Y_phosphatase3	0.75
PF10546	P63C	0.75
PF13474	SnoaL_3	0.75
PF01242	PTPS	0.75
PF04101	Glyco_tran_28_C	0.75
PF04365	BrnT_toxin	0.75
PF00072	Response_reg	0.75

COG ID	Name	Functional Category	% Frequency in 133 Family Scaffolds
COG0616	Periplasmic serine protease, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	3.01
COG0740	ATP-dependent protease ClpP, protease subunit	Posttranslational modification, protein turnover, chaperones [O]	3.01
COG1030	Membrane-bound serine protease NfeD, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	1.50
COG3343	DNA-directed RNA polymerase, delta subunit	Transcription [K]	1.50
COG3657	Putative component of the toxin-antitoxin plasmid stabilization module	Defense mechanisms [V]	1.50
COG4679	Phage-related protein gp49, toxin component of the Tad-Ata toxin-antitoxin system	Defense mechanisms [V]	1.50
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	0.75
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	0.75
COG0720	6-pyruvoyl-tetrahydropterin synthase	Coenzyme transport and metabolism [H]	0.75
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	0.75
COG1427	Chorismate dehydratase (menaquinone biosynthesis, futalosine pathway)	Coenzyme transport and metabolism [H]	0.75
COG1598	Antitoxin component HicB of the HicAB toxin-antitoxin system	Defense mechanisms [V]	0.75
COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	Defense mechanisms [V]	0.75
COG2929	Ribonuclease BrnT, toxin component of the BrnT-BrnA toxin-antitoxin system	Defense mechanisms [V]	0.75
COG3339	Uncharacterized membrane protein YkvA, DUF1232 family	Function unknown [S]	0.75
COG4226	Predicted nuclease of the RNAse H fold, HicB family	General function prediction only [R]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	63.91 %
Unclassified	root	N/A	36.09 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	63.91 %
Unclassified	root	N/A	36.09 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	63.16 %
Unclassified	root	N/A	36.09 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.75 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	37.59 %
Unclassified	root	N/A	36.09 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.26 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.75 %
environmental samples	no rank	All Organisms → cellular organisms → Archaea → environmental samples	0.75 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.09 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	21.80 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	7.52 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.75 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.75 %
uncultured archaeon	species	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	0.75 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.09 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	19.55 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	5.26 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_61_28	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_61_28	1.50 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	0.75 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	0.75 %
Candidatus Angelobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter	0.75 %
candidate division NC10	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	0.75 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.75 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.75 %
uncultured archaeon	species	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.09 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	19.55 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5.26 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_61_28	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_61_28	1.50 %
unclassified Candidatus Angelobacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter	0.75 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	0.75 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	0.75 %
unclassified candidate division NC10	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → unclassified candidate division NC10	0.75 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	0.75 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.75 %
uncultured archaeon	species	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.09 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	19.55 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	1.50 %
Terriglobus	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus	1.50 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_61_28	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_61_28	1.50 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.75 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.75 %
candidate division NC10 bacterium CSP1-5	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → unclassified candidate division NC10 → candidate division NC10 bacterium CSP1-5	0.75 %
Acidipila	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila	0.75 %
Rhodanobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rhodanobacter	0.75 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	0.75 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.75 %
uncultured archaeon	species	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.09 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	19.55 %
Terriglobus albidus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus albidus	1.50 %
Granulicella aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	1.50 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_61_28	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_61_28	1.50 %
unclassified Rhodanobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rhodanobacter → unclassified Rhodanobacter	0.75 %
unclassified Acidipila	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila	0.75 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.75 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.75 %
candidate division NC10 bacterium CSP1-5	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → unclassified candidate division NC10 → candidate division NC10 bacterium CSP1-5	0.75 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	0.75 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.75 %
uncultured archaeon	species	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.09 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	19.55 %
Terriglobus albidus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus albidus	1.50 %
Granulicella aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	1.50 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_61_28	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_61_28	1.50 %
Acidipila sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	0.75 %
Rhodanobacter sp. FW510-R10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rhodanobacter → unclassified Rhodanobacter → Rhodanobacter sp. FW510-R10	0.75 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.75 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.75 %
candidate division NC10 bacterium CSP1-5	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → unclassified candidate division NC10 → candidate division NC10 bacterium CSP1-5	0.75 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	0.75 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.75 %
uncultured archaeon	species	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_17466794	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	26241	Open in IMG/M
3300001545\|JGI12630J15595_10012797	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1814	Open in IMG/M
3300001593\|JGI12635J15846_10049367	All Organisms → cellular organisms → Bacteria	3220	Open in IMG/M
3300002245\|JGIcombinedJ26739_101647597	Not Available	540	Open in IMG/M
3300004080\|Ga0062385_10140151	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1234	Open in IMG/M
3300004082\|Ga0062384_101273739	Not Available	537	Open in IMG/M
3300004092\|Ga0062389_100386152	All Organisms → cellular organisms → Bacteria	1512	Open in IMG/M
3300004479\|Ga0062595_102002491	Not Available	559	Open in IMG/M
3300005174\|Ga0066680_10542542	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	731	Open in IMG/M
3300005332\|Ga0066388_100902789	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1461	Open in IMG/M
3300005434\|Ga0070709_10614521	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	838	Open in IMG/M
3300005536\|Ga0070697_100279427	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1432	Open in IMG/M
3300005537\|Ga0070730_10023810	All Organisms → cellular organisms → Bacteria	4707	Open in IMG/M
3300005537\|Ga0070730_10033699	All Organisms → cellular organisms → Bacteria → Acidobacteria	3841	Open in IMG/M
3300005542\|Ga0070732_10118326	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1568	Open in IMG/M
3300005591\|Ga0070761_10324160	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	930	Open in IMG/M
3300005602\|Ga0070762_10025843	All Organisms → cellular organisms → Bacteria	3105	Open in IMG/M
3300006102\|Ga0075015_100455719	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300006162\|Ga0075030_100480691	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	988	Open in IMG/M
3300006173\|Ga0070716_100367200	All Organisms → cellular organisms → Bacteria	1024	Open in IMG/M
3300006237\|Ga0097621_100938146	Not Available	807	Open in IMG/M
3300006800\|Ga0066660_10481027	All Organisms → cellular organisms → Bacteria → Acidobacteria	1042	Open in IMG/M
3300006861\|Ga0063777_1046167	Not Available	506	Open in IMG/M
3300006903\|Ga0075426_10085015	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2263	Open in IMG/M
3300006903\|Ga0075426_10142689	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_61_28	1726	Open in IMG/M
3300007258\|Ga0099793_10450786	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus albidus	636	Open in IMG/M
3300007265\|Ga0099794_10059248	All Organisms → cellular organisms → Bacteria	1857	Open in IMG/M
3300009012\|Ga0066710_100723511	Not Available	1520	Open in IMG/M
3300009038\|Ga0099829_10231480	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1503	Open in IMG/M
3300009038\|Ga0099829_11189011	Not Available	631	Open in IMG/M
3300009549\|Ga0116137_1071848	Not Available	1064	Open in IMG/M
3300010159\|Ga0099796_10282126	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	699	Open in IMG/M
3300010376\|Ga0126381_100225285	Not Available	2524	Open in IMG/M
3300010379\|Ga0136449_100374150	All Organisms → cellular organisms → Bacteria	2544	Open in IMG/M
3300010858\|Ga0126345_1284803	Not Available	1081	Open in IMG/M
3300010865\|Ga0126346_1355591	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	1253	Open in IMG/M
3300011120\|Ga0150983_16003615	Not Available	1064	Open in IMG/M
3300011269\|Ga0137392_10914555	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	722	Open in IMG/M
3300011269\|Ga0137392_11006766	Not Available	684	Open in IMG/M
3300011270\|Ga0137391_10062005	All Organisms → cellular organisms → Bacteria → Acidobacteria	3202	Open in IMG/M
3300011271\|Ga0137393_11364746	Not Available	598	Open in IMG/M
3300011305\|Ga0138532_1139984	Not Available	561	Open in IMG/M
3300012189\|Ga0137388_10029138	All Organisms → cellular organisms → Bacteria → Acidobacteria	4275	Open in IMG/M
3300012189\|Ga0137388_10694697	All Organisms → cellular organisms → Bacteria → Acidobacteria	945	Open in IMG/M
3300012200\|Ga0137382_11192077	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	541	Open in IMG/M
3300012203\|Ga0137399_10013901	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	4994	Open in IMG/M
3300012203\|Ga0137399_10122739	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2043	Open in IMG/M
3300012203\|Ga0137399_10779819	Not Available	805	Open in IMG/M
3300012203\|Ga0137399_11024419	Not Available	695	Open in IMG/M
3300012203\|Ga0137399_11266106	Not Available	621	Open in IMG/M
3300012205\|Ga0137362_10003230	All Organisms → cellular organisms → Bacteria	10868	Open in IMG/M
3300012206\|Ga0137380_11455015	Not Available	570	Open in IMG/M
3300012206\|Ga0137380_11603025	Not Available	535	Open in IMG/M
3300012207\|Ga0137381_10237537	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_61_28	1583	Open in IMG/M
3300012349\|Ga0137387_10184605	All Organisms → cellular organisms → Bacteria	1495	Open in IMG/M
3300012357\|Ga0137384_10663564	Not Available	848	Open in IMG/M
3300012359\|Ga0137385_10201891	All Organisms → cellular organisms → Bacteria	1735	Open in IMG/M
3300012361\|Ga0137360_10097248	All Organisms → cellular organisms → Bacteria	2244	Open in IMG/M
3300012582\|Ga0137358_10157958	All Organisms → cellular organisms → Bacteria	1545	Open in IMG/M
3300012683\|Ga0137398_10008764	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	5002	Open in IMG/M
3300012685\|Ga0137397_10035192	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3577	Open in IMG/M
3300012685\|Ga0137397_11289621	Not Available	520	Open in IMG/M
3300012917\|Ga0137395_10110333	All Organisms → cellular organisms → Bacteria → Acidobacteria	1840	Open in IMG/M
3300012918\|Ga0137396_10281949	All Organisms → cellular organisms → Bacteria	1227	Open in IMG/M
3300012918\|Ga0137396_11171882	Not Available	544	Open in IMG/M
3300012922\|Ga0137394_11359528	Not Available	572	Open in IMG/M
3300012925\|Ga0137419_11273677	Not Available	617	Open in IMG/M
3300012927\|Ga0137416_10118850	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus albidus	2020	Open in IMG/M
3300012929\|Ga0137404_11125465	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	721	Open in IMG/M
3300012929\|Ga0137404_11316800	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	666	Open in IMG/M
3300012944\|Ga0137410_10259022	All Organisms → cellular organisms → Bacteria	1365	Open in IMG/M
3300012944\|Ga0137410_11730076	Not Available	551	Open in IMG/M
3300014968\|Ga0157379_12680816	Not Available	500	Open in IMG/M
3300015241\|Ga0137418_10445912	Not Available	1046	Open in IMG/M
3300015264\|Ga0137403_10142946	Not Available	2364	Open in IMG/M
3300017929\|Ga0187849_1059165	Not Available	1750	Open in IMG/M
3300017955\|Ga0187817_10399822	Not Available	877	Open in IMG/M
3300018074\|Ga0184640_10015774	All Organisms → cellular organisms → Bacteria → Acidobacteria	2803	Open in IMG/M
3300018088\|Ga0187771_10179926	All Organisms → cellular organisms → Bacteria	1748	Open in IMG/M
3300020199\|Ga0179592_10156849	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	1040	Open in IMG/M
3300020199\|Ga0179592_10505879	Not Available	517	Open in IMG/M
3300020579\|Ga0210407_10060611	All Organisms → cellular organisms → Bacteria	2833	Open in IMG/M
3300020579\|Ga0210407_10080493	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2455	Open in IMG/M
3300020580\|Ga0210403_10112539	All Organisms → cellular organisms → Bacteria → Acidobacteria	2212	Open in IMG/M
3300020583\|Ga0210401_10045493	All Organisms → cellular organisms → Bacteria	4152	Open in IMG/M
3300021168\|Ga0210406_11375235	Not Available	505	Open in IMG/M
3300021170\|Ga0210400_10082560	All Organisms → cellular organisms → Bacteria	2527	Open in IMG/M
3300021171\|Ga0210405_10697806	Not Available	784	Open in IMG/M
3300021405\|Ga0210387_10005375	All Organisms → cellular organisms → Bacteria	9793	Open in IMG/M
3300021420\|Ga0210394_10000079	All Organisms → cellular organisms → Bacteria	230797	Open in IMG/M
3300021420\|Ga0210394_10081720	All Organisms → cellular organisms → Bacteria	2791	Open in IMG/M
3300021433\|Ga0210391_10987002	Not Available	656	Open in IMG/M
3300021478\|Ga0210402_10946449	Not Available	788	Open in IMG/M
3300021559\|Ga0210409_10024093	All Organisms → cellular organisms → Bacteria	5887	Open in IMG/M
3300022504\|Ga0242642_1011149	Not Available	1110	Open in IMG/M
3300022726\|Ga0242654_10192313	Not Available	705	Open in IMG/M
3300024178\|Ga0247694_1034121	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	572	Open in IMG/M
3300025165\|Ga0209108_10548658	Not Available	548	Open in IMG/M
3300025915\|Ga0207693_10459140	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	995	Open in IMG/M
3300026319\|Ga0209647_1022071	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3911	Open in IMG/M
3300026319\|Ga0209647_1029453	All Organisms → cellular organisms → Bacteria → Proteobacteria	3241	Open in IMG/M
3300026446\|Ga0257178_1006427	Not Available	1218	Open in IMG/M
3300026551\|Ga0209648_10097391	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2418	Open in IMG/M
3300027645\|Ga0209117_1002152	All Organisms → cellular organisms → Bacteria	6861	Open in IMG/M
3300027648\|Ga0209420_1184909	Not Available	559	Open in IMG/M
3300027678\|Ga0209011_1143163	Not Available	675	Open in IMG/M
3300027846\|Ga0209180_10768057	Not Available	518	Open in IMG/M
3300027854\|Ga0209517_10049123	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3210	Open in IMG/M
3300027857\|Ga0209166_10033258	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3121	Open in IMG/M
3300027869\|Ga0209579_10149682	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1244	Open in IMG/M
3300028047\|Ga0209526_10032315	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3679	Open in IMG/M
3300028379\|Ga0268266_11261484	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300028536\|Ga0137415_10189830	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	1877	Open in IMG/M
3300028673\|Ga0257175_1081011	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	623	Open in IMG/M
3300031057\|Ga0170834_113438125	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → unclassified candidate division NC10 → candidate division NC10 bacterium CSP1-5	1427	Open in IMG/M
3300031090\|Ga0265760_10259375	Not Available	604	Open in IMG/M
3300031128\|Ga0170823_12441557	Not Available	517	Open in IMG/M
3300031708\|Ga0310686_110955398	All Organisms → cellular organisms → Bacteria → Acidobacteria	1419	Open in IMG/M
3300031708\|Ga0310686_119255598	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rhodanobacter → unclassified Rhodanobacter → Rhodanobacter sp. FW510-R10	1989	Open in IMG/M
3300031753\|Ga0307477_10366627	All Organisms → cellular organisms → Bacteria → Proteobacteria	989	Open in IMG/M
3300031754\|Ga0307475_10361369	All Organisms → cellular organisms → Bacteria	1166	Open in IMG/M
3300031754\|Ga0307475_10446169	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1040	Open in IMG/M
3300031754\|Ga0307475_11067397	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	633	Open in IMG/M
3300031823\|Ga0307478_10000879	All Organisms → cellular organisms → Bacteria	28469	Open in IMG/M
3300031823\|Ga0307478_10761023	Not Available	811	Open in IMG/M
3300031962\|Ga0307479_10825564	Not Available	902	Open in IMG/M
3300031962\|Ga0307479_11001218	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	805	Open in IMG/M
3300032160\|Ga0311301_10436979	All Organisms → cellular organisms → Bacteria	1980	Open in IMG/M
3300032205\|Ga0307472_101499480	Not Available	658	Open in IMG/M
3300032892\|Ga0335081_10720741	All Organisms → cellular organisms → Bacteria → Acidobacteria	1206	Open in IMG/M
3300032898\|Ga0335072_11351485	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300033977\|Ga0314861_0002878	All Organisms → cellular organisms → Bacteria → Acidobacteria	17318	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.24%
Host-Associated	Host-Associated	3.76%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.47%
Aquatic	Environmental → Aquatic	6.77%
Plants	Host-Associated → Plants	3.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.47%
Freshwater	Environmental → Aquatic → Freshwater	4.51%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.01%
Sediment	Environmental → Aquatic → Sediment	2.26%
Roots	Host-Associated → Plants → Roots	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	75.19%
Loam	Environmental → Terrestrial → Soil → Loam	11.28%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.51%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.01%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.26%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.75%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	47.37%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	21.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.27%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.26%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.01%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.01%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.01%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.26%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.75%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.75%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.75%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	34.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.53%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.02%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.76%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.01%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.01%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.26%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.50%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.50%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.50%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.50%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.50%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.50%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.75%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.75%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.75%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.75%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.75%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006861	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009549	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_100	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010858	Boreal forest soil eukaryotic communities from Alaska, USA - C3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010865	Boreal forest soil eukaryotic communities from Alaska, USA - C3-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300011305	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 10 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022504	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-2-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024178	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK35	Environmental	Open in IMG/M
3300025165	Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 1	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026446	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-B	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027678	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028673	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-B	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033977	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SJ75	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_00625840	2088090014	Soil	MKVEKDRFDTLLGKMIATRPEPRKKIKTKGRKGSKSPILSLKL
JGI12630J15595_100127976	3300001545	Forest Soil	MKVDKNKFDALLGKLLKAKPEPRKKIKTEGRKGSKSPILAK*
JGI12635J15846_100493675	3300001593	Forest Soil	MKVEKEKFDSLLGKLLKAKPEPRKKIKTQGKRGPKPIIPPNS*
JGIcombinedJ26739_1016475972	3300002245	Forest Soil	MKVEKGKFDDVLTKLLKAKPEPRKKIKTTGRRGSKAPILSPR*
Ga0062385_101401511	3300004080	Bog Forest Soil	MKVEKEKFDALLTKLIKAKPEPRKKIKTTGKRGKPILTPR*
Ga0062384_1012737391	3300004082	Bog Forest Soil	VRVEKQKFDDLLGKLLKAKPEPRKKIKTQGRRGPKTAILSRGSSGTDNS*
Ga0062389_1003861521	3300004092	Bog Forest Soil	MKVEKQRFDDLLGKLLKAKPEPRKKIKTAKRKPAKIINSVPR*
Ga0062595_1020024913	3300004479	Soil	MAKVRKDRFDALLTKLLAAKPEPRKKIKTQGRTGSKSPILGKKVC*
Ga0066680_105425422	3300005174	Soil	MKVGKRKFDDALTKMLRAKPEPRKKIKTQGRRGPKTPILASRELLV
Ga0066388_1009027892	3300005332	Tropical Forest Soil	MKVEKNKFDKLLVKLLSAEPEPRKKIKTQGRKGSKAPILAK*
Ga0070709_106145212	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MKVEKKKFDSLLGKLLKAKPEPRQKIKTQGRKGSKTPILAK*
Ga0070697_1002794273	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	GEYMAKVRKDRFDALLTKLLAAKPEPRKKIKTQGRTGSKSPILGKKVC*
Ga0070730_100238108	3300005537	Surface Soil	MKVDKGKFDVLLGKLLRAKPEPRKKIKTKGKRGPKTPILSR*
Ga0070730_100336995	3300005537	Surface Soil	VEKGTLKVEKQKFDNALSKLLKAKPEPRKAIKTTGRRTSKPILPVKP*
Ga0070732_101183263	3300005542	Surface Soil	MRVEKEKFDSLLGKLLKAKPEPRKKIKTQGKRGPKTSIIPANDHLKRP*
Ga0070761_103241603	3300005591	Soil	MKVEKEKFDSLLGKLLKAKPEPRKKIKTSGKRGPKSPILSR*
Ga0070762_100258435	3300005602	Soil	MNKRVIVRKTEFDDILGKLLKAKPEPRKQIKTQGRKGSKAPILAKT*
Ga0075015_1004557192	3300006102	Watersheds	MKANKEKFDALLGRLLKAKPKPRKKIKTQGRKGSKSPVLAKP*
Ga0075030_1004806913	3300006162	Watersheds	MKVEKQKFDALLGKLLKAKPEPRKKIKTPGRKGSKAPILAK*
Ga0070716_1003672001	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	HAFEMKVEKQKFDSLLGKLLKAKPEPRKKIKTQGRKGSKAPILAK*
Ga0097621_1009381463	3300006237	Miscanthus Rhizosphere	MKVEKEKFDSLLGKLLKAKPEPRKKIKTKGRRGPKTPILAK*
Ga0066660_104810272	3300006800	Soil	MKVEKEKFDSLLGKLLKTKPEPRRKIKTQGRKGSKTPILAKP*
Ga0063777_10461673	3300006861	Peatlands Soil	FEMKVEKEKFDSLLGKLLKAKPEPRKKIKTQGKRGSKSPILGRNAG*
Ga0075426_100850156	3300006903	Populus Rhizosphere	MKVEKQKFDTLLEKLIKAKPKPRKKIETTGKRTTSILPSK*
Ga0075426_101426893	3300006903	Populus Rhizosphere	MKVQKDKFDKLLGKLISSKPEPRKKIKTQGRKGPKTPILAK*
Ga0099793_104507862	3300007258	Vadose Zone Soil	MKADKEKFDALLSKLLKAKPEPLRKIKTQGKRGPKTPILSR*
Ga0099794_100592483	3300007265	Vadose Zone Soil	MKVEKEKFDLLLGKLLKAKPEPRKKIKTQGRRGSKAPILIKNSQT*
Ga0066710_1007235113	3300009012	Grasslands Soil	MEVDKGKFDAVLSKLIKAKPEPRKKIKTQGRRGPKKPILRKP
Ga0099829_102314802	3300009038	Vadose Zone Soil	MKVEKEKFDALLGKLLKAKPEPRKQIKTRGKHGSKKPILPEKS*
Ga0099829_111890112	3300009038	Vadose Zone Soil	MKVEKEKFDALLGKLLKAKPEPRKKIKTQGRHGTKKPIIRSNSA*
Ga0116137_10718481	3300009549	Peatland	MKVEKNKFDAALAKLLKAKPAPKKNIKTSGKRGSKKGGWPID*
Ga0099796_102821262	3300010159	Vadose Zone Soil	FKILKVEKEKFDAVLQRLLKAKPHPRNKVKTNGKRGSKQPLLKK*
Ga0126381_1002252853	3300010376	Tropical Forest Soil	MKTEKKKFDAVLSKLLCAKPVPRKKIKTQGKHGSKKPILIKHEV*
Ga0136449_1003741505	3300010379	Peatlands Soil	MVNVVVEKNKFDNVLGRLLQTSPKPLKKIKTGGKRGPKTPILAKS*
Ga0126345_12848033	3300010858	Boreal Forest Soil	MKVEKKKFDDALAKLLRAKPQPRKKIKTKGRRGPKPILSR*
Ga0126346_13555912	3300010865	Boreal Forest Soil	MKVEKEKFDSLLGRLLKAKPEPRKKIKTTGKHGSKKPIISQS*
Ga0150983_160036152	3300011120	Forest Soil	LVVMKVGKEKFDSLLGKLLKAKPEPRKKIKTSGKHGSKRPILSS*
Ga0137392_109145552	3300011269	Vadose Zone Soil	MKVEKDKFDTALATLLKAKPAPKKAIKTRGKRGSKKPIITPSPQQ*
Ga0137392_110067663	3300011269	Vadose Zone Soil	MKVEKQKFDSLLGKLLKAKPEPRKKIKTRGRRGSKAPILT
Ga0137391_100620052	3300011270	Vadose Zone Soil	MKKTKVLVAKSKFDNVLGNLLRKSPIQRKQIKTQGRKGSKTPILAKP*
Ga0137393_113647463	3300011271	Vadose Zone Soil	MKVEKEKFDSLLGKLLKAKPEPHKKTKIQGRKGSKTPI
Ga0138532_11399843	3300011305	Peatlands Soil	MKVEKEKFDSLLGKLLKAKPEPRKKIKTQGKRGSKS
Ga0137388_100291383	3300012189	Vadose Zone Soil	MRVEKEKFDSLLGKLLAKKPEPRKKIKTQGRKGSKAPILAK*
Ga0137388_106946971	3300012189	Vadose Zone Soil	MKVEKRKFDNALTKMLRAKPAPRKKIKTQGLARRGALA*
Ga0137382_111920771	3300012200	Vadose Zone Soil	KFDQALTKMLRAKPEPRKKIKTPGRRGPKTPMLVKP*
Ga0137399_100139015	3300012203	Vadose Zone Soil	MKVEKEKFDSLLGKLLKAKPEPRKKIKTQGKHGPKTPILSKS*
Ga0137399_101227392	3300012203	Vadose Zone Soil	MKVQKEKFDAVLTKLLKAKPEPRKKIKAQGRKGSKAPILAKP*
Ga0137399_107798192	3300012203	Vadose Zone Soil	MKVEKEKFDSLLGKLLKAKPEPRKKIKTQGKHVSKNPIIKP*
Ga0137399_110244192	3300012203	Vadose Zone Soil	EKEKFDLLLGKLLKAKPEPRKKIKTQGRRGSKAPILIKNSQT*
Ga0137399_112661062	3300012203	Vadose Zone Soil	MKVEKEKFDAALAKLLRAKPQPRKKIKTQGKRGPKPIFRPS*
Ga0137362_100032307	3300012205	Vadose Zone Soil	MKVEKEKFDSLLGKLLKAKPKPRKKMKISGKRTPKPILSNR*
Ga0137380_114550151	3300012206	Vadose Zone Soil	MKANKEKFDALLGRLLKAKPEPRKKIKTQGRKGSKAPILAKP*
Ga0137380_116030252	3300012206	Vadose Zone Soil	MKVGKEKFDSLLGKLLKAKPEPRKKIKTSGKRTRTPIILK*
Ga0137381_102375371	3300012207	Vadose Zone Soil	MKVEKQEFDSLLGKLLKAKPEPRKQIKTQGRKGSKAPILAKP*
Ga0137370_110393241	3300012285	Vadose Zone Soil	LRNRQPCYHARKRKGEKRKFDNALTKLLRAKPEPRKKIKTPGRRGPKTPIL
Ga0137387_101846051	3300012349	Vadose Zone Soil	NIACMKVEKENFDALLGKLLKAKPEPRKKIKTQARRGPKTPILIKNSSS*
Ga0137384_106635643	3300012357	Vadose Zone Soil	MKVEKQEFDSLLGKLLKAKPEPRKQIKTQGRKGSKAPI
Ga0137385_102018913	3300012359	Vadose Zone Soil	MKVEKENFDALLGKLLKAKPEPRKKIKTQARRGPKTPILIKNSSS*
Ga0137360_100972484	3300012361	Vadose Zone Soil	MKVEKQKFDALLGKLLKAKPEPRKKIKTQGRKGSKTPILAK*
Ga0137358_101579584	3300012582	Vadose Zone Soil	MKVEKEKFDALLSKLIKAKPEPRKKIKTHGKRGSKAPIIPKNPQ*
Ga0137398_100087645	3300012683	Vadose Zone Soil	MKVEKEKFDSLLGKLLKAKPEPRKQIKTAKRKPAKIIQSAAR*
Ga0137397_100351924	3300012685	Vadose Zone Soil	MKVEKEKFDSLLGKLLKAKPEPRKKIKTQGRHGSKKPILKP*
Ga0137397_112896211	3300012685	Vadose Zone Soil	MKVEKQKFDDALAKLLCAKPQPRKKIKASGKRTAKPILAKP*
Ga0137395_101103333	3300012917	Vadose Zone Soil	MKVHKDKFDGVLAKLLRAKPQPRKKIKTQGNRGPKKPILSPDQP*
Ga0137396_102819492	3300012918	Vadose Zone Soil	AREMKVGKRKFDDALTKMLRAKPEPRKKIKTQGRRGPKTPILAKP*
Ga0137396_111718821	3300012918	Vadose Zone Soil	MKVGKRKFDDALTKMLRAKPEPRKKIKTQGRRGPKTP
Ga0137394_113595283	3300012922	Vadose Zone Soil	MKVEKEKFDSLLGKLLKAKPEPRKKIKTEGKHGSKAPIIKNG*
Ga0137419_112736772	3300012925	Vadose Zone Soil	MKVEKQKFDDAPAKLLRAKPQPRKKIKTQGRRGPKTPILST*
Ga0137416_101188501	3300012927	Vadose Zone Soil	MKANKEKFDALLSRLLKAKPEPRKKIKTQGKRGPK
Ga0137404_111254651	3300012929	Vadose Zone Soil	MKVEKQKFDDALTKLLCAKPQPRKKIKASGKRTAKPILAKP*
Ga0137404_113168001	3300012929	Vadose Zone Soil	MKVEKEKFDSLLGKLIKAKPEPRKKIKTQGRKGPKTPI
Ga0137410_102590225	3300012944	Vadose Zone Soil	MKVEKEKFDSLLGKLLKTRPTPRKNIKTQGKRGTKAILRAGEEKSQT*
Ga0137410_117300761	3300012944	Vadose Zone Soil	MRVKKEKFDSVLAKLLKAKPEPRKKIKTQGRKGPKTPILAK*
Ga0157379_126808161	3300014968	Switchgrass Rhizosphere	MKVEKQKFDSLLGKLLKAKPEPRKKIKTKGKHGPKAPILSHSTSH*
Ga0137418_104459124	3300015241	Vadose Zone Soil	MKVEKQKFDTLLGKVLIAKPAPRKKIKTPGKRGPKKPIIPHQND*
Ga0137403_101429465	3300015264	Vadose Zone Soil	MKVEKQKFDSMLGKFLNAKPEPRKKIKTQGRKGSKTPILAK*
Ga0187849_10591651	3300017929	Peatland	MKVEKNKFDAALAKLLKAKPAPKKNIKTSGKRGSKKGGWPID
Ga0187817_103998222	3300017955	Freshwater Sediment	MKVEKEKFDSLLGKLLKAKPEPRKKIKTQGRRGPKTPILGKN
Ga0184640_100157744	3300018074	Groundwater Sediment	MKVEKEKFDAALAKLLKAKPEPRKKIKTEGKHGPKTPILAKP
Ga0187771_101799262	3300018088	Tropical Peatland	MKVEKAKFDALLIKMIKAKPEPRQKIKTEGRKGSKAPILAK
Ga0179592_101568493	3300020199	Vadose Zone Soil	MKVEKQKFDDLLGKLLKAKPEPRKKIRTRGKHGPKKPIISQSQGQ
Ga0179592_105058791	3300020199	Vadose Zone Soil	KEKFDCALSKLIKAKPEPRKAIKTPGRKRRETPIISK
Ga0210407_100606114	3300020579	Soil	MKVEKEKFDSLLGKLLKAKPEPRKKIKTQGRKGSKTPIISGHSNQ
Ga0210407_100804932	3300020579	Soil	MKVEKEKFDSLLGKMLKAKPEPRKKIKTSGKRTAKPILSNR
Ga0210403_101125393	3300020580	Soil	MKVEKEKFDALLGKLLKAKPEPRKKIKTQGRRGSKAPILIKNSQS
Ga0210401_100454932	3300020583	Soil	MKVEKEKFDSLLGKLLKAKPAPRKKIKTSGKRGSKKPLLNS
Ga0210406_113752352	3300021168	Soil	KVEKQKFDSILVKLIKAKPEPRKSIKTQGRKGSKAPILINQPK
Ga0210400_100825602	3300021170	Soil	MKVEKDKFDSALAKLLKAKPAPRKKIKTTGKRTAKPILPKP
Ga0210405_106978062	3300021171	Soil	MKVEKEKFDAVLTKLIKAKPSPRKKIKTQGRRGSKKPLLTNG
Ga0210387_100053758	3300021405	Soil	MNKRVIVRKTEFDDILGKLLKAKPEPRKQIKTQGRKGSKAPILAKT
Ga0210394_10000079195	3300021420	Soil	MRVEKGKFDSLLGKLLKAKPEPRKKIKTQGRKGSKNPILAKP
Ga0210394_100817202	3300021420	Soil	MKVEKQKFDKALTKMLGAKPKPRKKIKTQGRRGPKTPILAKP
Ga0210391_109870021	3300021433	Soil	MKVEKQKFDKALTKMLGAKPEPRKKIKTQGRRGPKTPILAKP
Ga0210402_109464491	3300021478	Soil	MKANKEKFDALLGRLLKAKPEPRRKIKTTGKRTANPIVPVKP
Ga0210409_100240935	3300021559	Soil	MKVEKEKFDALLGKLLKAKPEPRKKIKTQGKHGPKTPIINKED
Ga0242642_10111493	3300022504	Soil	MKVEKEKFDSLLGKLLKAKPEPRKKIKTQGKRGPKTPILGKSSDQSRS
Ga0242654_101923131	3300022726	Soil	MKVEKQKFDSILVKLIKAKPEPRKSIKTQGRKGSKAPILINQPK
Ga0247694_10341212	3300024178	Soil	MKVEKQKFDTILEKLLKAKPEPRKKIKTQGRKGSKAPILAKT
Ga0209108_105486581	3300025165	Soil	MKVEKEKLDAALAKLLKAKPEPRKKIKTEGKHGPKTPILAKP
Ga0207693_104591402	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	LGERKVKVEKQKFDSLLSKLLATKPEPRKKIKTKGKRG
Ga0209647_10220715	3300026319	Grasslands Soil	MKANKEKFDALLSRLLKAKPEPRKKIKTQGKRGPKTPILSR
Ga0209647_10294532	3300026319	Grasslands Soil	MTKVSKDKFDSLLSKLIQAKPEPRKKIKTQGRKGSKTPILAK
Ga0257178_10064271	3300026446	Soil	KVGKRKFDDALTKMLRAKPEPRKKIKTQGRRGPKTPILAKP
Ga0209648_100973912	3300026551	Grasslands Soil	MKVEKEKFDSLLGKLLKAKPEPHKKTKIQGRKGSKTPILAKP
Ga0209117_10021526	3300027645	Forest Soil	MKVEKEKFDSLLGKLLKAKPEPRKKIKTQGKRGPKPIIPPNS
Ga0209420_11849091	3300027648	Forest Soil	MGSYMSKVEVAKEKFDMLLSKVLRAKPAPRDKIKNGGKHGPKTPILAKP
Ga0209011_11431632	3300027678	Forest Soil	MKVEKEKFDSLLGKLLKAKPEPRKKIKTQGRRGSKAPLLFRRPT
Ga0209180_107680572	3300027846	Vadose Zone Soil	MKVEKEKFDALLGKLLKAKPEPRKKIKTQGRHGTKKPIIRSNSA
Ga0209517_100491233	3300027854	Peatlands Soil	MAKVQKVKFDGLLTKLLSAKPEPRKNIRTNGKRSPKTAILAKQ
Ga0209166_100332582	3300027857	Surface Soil	MKVDKGKFDVLLGKLLRAKPEPRKKIKTKGKRGPKTPILSR
Ga0209579_101496823	3300027869	Surface Soil	MRVEKEKFDSLLGKLLKAKPEPRKKIKTQGKRGPKTSIIPANDHLKRP
Ga0209526_100323155	3300028047	Forest Soil	VEKRKFDQALKKMLRAKPEPRKKIKTQGRRGPKTPILAKP
Ga0268266_112614841	3300028379	Switchgrass Rhizosphere	MKVEKNKFDTLLDKLISAKPEPRKKIKTQGRKGSKSPILSRP
Ga0137415_101898302	3300028536	Vadose Zone Soil	MKVEKEKFDSLLGKLLKAKPEPRKKIKTQGKHGPKTPILSKS
Ga0257175_10810112	3300028673	Soil	FDKALTKLLRAKPEPRKKIKTRGRRGVKTPILAKP
Ga0170834_1134381252	3300031057	Forest Soil	LWESGERKVKVEKQKFDSLLGKLLATKPEPRKKIKTKGKRGPKTPILAK
Ga0265760_102593751	3300031090	Soil	MKVEKEKFDLLLGKLLKAKPEPRKKIKTQGRRGPKTPILTK
Ga0170823_124415571	3300031128	Forest Soil	MKVAKDKFDHALAKLLQAKPEPRKKIKTQGRKGSKAPIL
Ga0310686_1109553982	3300031708	Soil	MKVEKRKFDKALTKLLRAEPEPRKKIKTRGRRGVKTPILAKP
Ga0310686_1192555984	3300031708	Soil	MKVEKEKFDDLLGKLLKAKPEPRKKIKTAGRRSSKAPLIKPS
Ga0307477_103666273	3300031753	Hardwood Forest Soil	MKVEKEKFDSLLGKLLKAKPEPRKKIKTQGKRGSKSPILGRNAG
Ga0307475_103613692	3300031754	Hardwood Forest Soil	MKVEKEKFDAALAKLLKAKPEPRKKIKTKGRRGPKTTTPYV
Ga0307475_104461692	3300031754	Hardwood Forest Soil	MKVEKEKFDSLLGKLLKAKPEPRKQIKTQGRKGSKAPILSRP
Ga0307475_110673972	3300031754	Hardwood Forest Soil	MKVEKREFDKALTKLLRAKPEPRKKIKTRGRRGAKTPILAKP
Ga0307478_100008798	3300031823	Hardwood Forest Soil	MNKRVIVKKTEFDDILGKLLKAKPEPRKQIKTQGRKGSKAPILAKT
Ga0307478_107610233	3300031823	Hardwood Forest Soil	MKVEKQKFDDALARLLRAKPQPRKKIKTQGKRGPKTAILS
Ga0307479_108255641	3300031962	Hardwood Forest Soil	MKVEKEKFDAALAKLLKAKPEPRKKIKTKGRRGPKTTTPHV
Ga0307479_110012182	3300031962	Hardwood Forest Soil	MKVEKEKFDAALAKLLRAKPQPRKKIKTQGKRTSRPILPKP
Ga0311301_104369794	3300032160	Peatlands Soil	MVNVVVEKNKFDNVLGRLLQTSPKPLKKIKTGGKRGPKTPILAKS
Ga0307472_1014994803	3300032205	Hardwood Forest Soil	MKVEKRKFDTILLKVLRAKPVPREKIKSGGKRGSKT
Ga0335081_107207412	3300032892	Soil	CYHRTMKVEKKKFDGLLGKLLAAKPEPREKIRAGKKSSPKTPILAKQ
Ga0335072_113514851	3300032898	Soil	EKEKFDSLLGKLLKAKPEPRKKIKTQGRRGPKKPILNQP
Ga0314861_0002878_15793_15936	3300033977	Peatland	MAKANLVVEKKKFDGILGHLLHAKPVPRNSIKAIGKRGPKTPILAKP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F060283

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences